IVF0008744 (gene) Melon (IVF77) v1

Overview


Name	IVF0008744
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	MADS-box transcription factor 23-like
Location	chr08: 4586739 .. 4588744 (-)
RNA-Seq Expression	IVF0008744
Synteny	IVF0008744

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAGAGGGAAGATTGTTATAAGAAGGATTGATAATTCAGCAAGTAGACAAGTAACTTTCTCAAAGAGAAGAAAGGGACTTATTAAAAAGGCTAAAGAACTCTCTATTCTCTGTGATGCTGAAGTTGGTCTCATTATTTTTTCTAGTTCTGGCAAACACTACGAATTTGCAAGCTCTAGGTTTGTGATTTCTCTCTCTTAGCTCGTTTTTAGATCAGATATATGTATTAATGGATCGAGTTTTCTGAAATTTTGTTTGACTTGTTAGTTAGTTGATAATCTTAGTTTTTTGTTTTTGGATTTAGAACTCAAAAGGGGAATGGTTATGATGAAATAGGTTTTAAAGCTGTTTTTATTAGGAAGAAATCTCTAGCTATACTATGAAATTATTTTCTTTGATTTGTTTGGGGTGAGATTTAGAGTTATATGATTTGTTTTTGGTGATCAGCATGCATTCAATAATTGAGAAATATAACAGAAGGAAGGAGGAAGATGAACTACTGTTGAATCCAATTTCAGATGTGAAGGTATAGATAATATTTATCCTCCGTGAAAGGAGCTATTCTTTTTTCTTTCAATTTCTCTTGATCTCTTTGTCCAAATTTATATGTGCATATAGTTTCATATTGTTGAGTTCTACATTTTTTGCTTGCGACATTTAGTGATGTTTTTTTGGGTGGATTTTCTAGTAGAAATAAGTATGTATTGAGATGACTCTTTCATGATTTACAAAAACTTGTCTTTGGGTCTAATTTGACGGATATACACCATATGGGGAAAATGTATGTATGTATAGAAAATTCAAAAGTAGTTTCACATTAAGATGAATTACATTCATATAAACACTATAATTAATCTTTTTAACATAATATTGTAACTCCGTGAGTTATCTCTAAAATGTTATTCAATGAAGTTGATACATAATGTATCTAATTTTTCATAATGATTGGATGTAAAGTTTTGAAATTTTGGATTTCCCTTGTATTTACATCATCGTTTAAAGTACATTTCACTTTTTATTTCATACGTTTATTAGCTTCATTATTGTAGCAACCGATTCGAATAATTTATCTTACCCCTGCAATTTGTTTGTCGATTGTTTTAATAATGTAATCACCATTATGATTAGTTGGTTAAATTGCAAAGTTTAGACCCCAGAACTTTTCGAGTAGTAAAAGGATCTCTAAACTTAAGAATGTCTTGAAGGTATTTGAATTTTGTTGTATCTAATAGAACGGTAAGCTTTAAAATGTGGTATATAATATATGATATATTAGATATAAAATTGAAAATCGTATGCTTAATCAGAGTACAGAAGACTTTCAAATTTTCAATGTTGGTCAATGTAGTATGTCTGTAAATTTGACGAGACCTGGACTAGAATATTGATCTCTCTACTCTGACACAAAAAATTGAGATTCTCAAAACGAAAAGACTTAAATTTGTAATAATTAAACACATATATAATTTTATTTGTTATTTAATGTGAAAGATGTGTGTTGGGTTGTTCTTTTTACATTGATAGTTATGGCAGAAGGAGGTAACAACATTAAGGCAGCAACTACATAACTTGCAGGAGAACAATAGGTATAACTACACCTTCTTCTTTTTTTAATTTTTCTAAGATTTTTCAATTACCAAAAAATATATGAAAATTTGTTATAAATAGAAAAAGAAAGACTACTTACAACATATAGTAAAAACAGATCATGAATTAATTCCTACAAACACAGATGTTAATTTTTAATAAATCTGACACTGGGTTTGTTATATACCTGTGTTTTCATTTTTTATTTCTCTTCTTTTTCCTTCCATTTTTTAAATGTCTTCTTTTCCTTAGAAATTGTTGTTGCCTTATAGTATTAAATATGCAGGAAGTTAATGGGGGAGCAACTGTATGGTTTATCAATCAAAGATCTAAATAATCTTGAGAATCAATTGGAGTTTAGCTTACAAAGCATTCGAATTAAAAAGGTTAGTTATGATTTATATCTATCATCATAG

mRNA sequence

ATGGGTAGAGGGAAGATTGTTATAAGAAGGATTGATAATTCAGCAAGTAGACAAGTAACTTTCTCAAAGAGAAGAAAGGGACTTATTAAAAAGGCTAAAGAACTCTCTATTCTCTGTGATGCTGAAGTTGGTCTCATTATTTTTTCTAGTTCTGGCAAACACTACGAATTTGCAAGCTCTAGCATGCATTCAATAATTGAGAAATATAACAGAAGGAAGGAGGAAGATGAACTACTGTTGAATCCAATTTCAGATGTGAAGTTATGGCAGAAGGAGGTAACAACATTAAGGCAGCAACTACATAACTTGCAGGAGAACAATAGGAAGTTAATGGGGGAGCAACTGTATGGTTTATCAATCAAAGATCTAAATAATCTTGAGAATCAATTGGAGTTTAGCTTACAAAGCATTCGAATTAAAAAGGTTAGTTATGATTTATATCTATCATCATAG

Coding sequence (CDS)

ATGGGTAGAGGGAAGATTGTTATAAGAAGGATTGATAATTCAGCAAGTAGACAAGTAACTTTCTCAAAGAGAAGAAAGGGACTTATTAAAAAGGCTAAAGAACTCTCTATTCTCTGTGATGCTGAAGTTGGTCTCATTATTTTTTCTAGTTCTGGCAAACACTACGAATTTGCAAGCTCTAGCATGCATTCAATAATTGAGAAATATAACAGAAGGAAGGAGGAAGATGAACTACTGTTGAATCCAATTTCAGATGTGAAGTTATGGCAGAAGGAGGTAACAACATTAAGGCAGCAACTACATAACTTGCAGGAGAACAATAGGAAGTTAATGGGGGAGCAACTGTATGGTTTATCAATCAAAGATCTAAATAATCTTGAGAATCAATTGGAGTTTAGCTTACAAAGCATTCGAATTAAAAAGGTTAGTTATGATTTATATCTATCATCATAG

Protein sequence

MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASSSMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSIKDLNNLENQLEFSLQSIRIKKVSYDLYLSS

Homology

[Close]

BLAST of IVF0008744 vs. ExPASy Swiss-Prot
Match: Q9SZJ6 (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana OX=3702 GN=AGL21 PE=1 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 3.5e-50
Identity = 101/141 (71.63%), Postives = 124/141 (87.94%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60
           MGRGKIVI+RID+S SRQVTFSKRRKGLIKKAKEL+ILCDAEVGLIIFSS+GK Y+FASS
Sbjct: 1   MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60

Query: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120
           SM S+I++YN+ K E + LLNP S+VK WQ+E   LRQ+LH LQEN+R++MGEQL GLS+
Sbjct: 61  SMKSVIDRYNKSKIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSV 120

Query: 121 KDLNNLENQLEFSLQSIRIKK 142
            +LN+LENQ+E SL+ IR++K
Sbjct: 121 NELNSLENQIEISLRGIRMRK 141

[Close]

BLAST of IVF0008744 vs. ExPASy Swiss-Prot
Match: Q6EP49 (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS27 PE=2 SV=2)

HSP 1 Score: 193.0 bits (489), Expect = 2.5e-48
Identity = 95/141 (67.38%), Postives = 122/141 (86.52%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60
           MGRGKIVIRRIDNS SRQVTFSKRR G+ KKAKEL+ILCDAEVGL+IFSS+G+ YE++S+
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSST 60

Query: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120
           SM S+I++Y + K+E + + NP S++K WQ+E  +LRQQLHNLQEN+R+LMGE L GL++
Sbjct: 61  SMKSVIDRYGKSKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNV 120

Query: 121 KDLNNLENQLEFSLQSIRIKK 142
           K+L +LENQLE SL+S+R KK
Sbjct: 121 KELQSLENQLEISLRSVRTKK 141

[Close]

BLAST of IVF0008744 vs. ExPASy Swiss-Prot
Match: Q6VAM4 (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS23 PE=2 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 2.6e-45
Identity = 92/141 (65.25%), Postives = 118/141 (83.69%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60
           MGRGKI I+RIDN+ SRQVTFSKRR GL KKA+ELSILCDAEVGL++FSS+ + Y+FASS
Sbjct: 1   MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASS 60

Query: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120
           SM SIIE+YN  KE+    +N  S+ KLWQ+E  +LRQQLHNLQE +R+L+G+QL GL +
Sbjct: 61  SMKSIIERYNETKEDPHQTMNASSEAKLWQQEAASLRQQLHNLQEYHRQLLGQQLSGLDV 120

Query: 121 KDLNNLENQLEFSLQSIRIKK 142
           +DL NLE++LE SL++IR++K
Sbjct: 121 EDLQNLESKLEMSLKNIRLRK 141

[Close]

BLAST of IVF0008744 vs. ExPASy Swiss-Prot
Match: Q9SI38 (MADS-box transcription factor ANR1 OS=Arabidopsis thaliana OX=3702 GN=ANR1 PE=1 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 4.4e-45
Identity = 98/142 (69.01%), Postives = 119/142 (83.80%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFAS- 60
           MGRGKIVIRRIDNS SRQVTFSKRR GL+KKAKELSILCDAEVG+IIFSS+GK Y++AS 
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASN 60

Query: 61  SSMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLS 120
           SSM +IIE+YNR KEE   LLN  S++K WQ+EV +L+QQL  LQE +RKL+GE+L G++
Sbjct: 61  SSMKTIIERYNRVKEEQHQLLNHASEIKFWQREVASLQQQLQYLQECHRKLVGEELSGMN 120

Query: 121 IKDLNNLENQLEFSLQSIRIKK 142
             DL NLE+QL  SL+ +R+KK
Sbjct: 121 ANDLQNLEDQLVTSLKGVRLKK 142

[Close]

BLAST of IVF0008744 vs. ExPASy Swiss-Prot
Match: Q38840 (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana OX=3702 GN=AGL17 PE=1 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 5.7e-45
Identity = 94/141 (66.67%), Postives = 120/141 (85.11%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60
           MGRGKIVI++ID+S SRQVTFSKRRKGLIKKAKEL+ILCDAEV LIIFS++ K Y+FASS
Sbjct: 1   MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASS 60

Query: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120
           S+ S IE++N  K E++ L+NP S+VK WQ+E  TLRQ+LH+LQEN R+L G +L GLS+
Sbjct: 61  SVKSTIERFNTAKMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSV 120

Query: 121 KDLNNLENQLEFSLQSIRIKK 142
           K+L N+E+QLE SL+ IR+K+
Sbjct: 121 KELQNIESQLEMSLRGIRMKR 141

[Close]

BLAST of IVF0008744 vs. ExPASy TrEMBL
Match: A0A1S3B0V7 (MADS-box transcription factor 23 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484916 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.2e-68
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60

Query: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120
           SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI
Sbjct: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120

Query: 121 KDLNNLENQLEFSLQSIRIKK 142
           KDLNNLENQLEFSLQSIRIKK
Sbjct: 121 KDLNNLENQLEFSLQSIRIKK 141

[Close]

BLAST of IVF0008744 vs. ExPASy TrEMBL
Match: A0A1S3B1B7 (MADS-box transcription factor 23 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103484916 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.2e-68
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60

Query: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120
           SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI
Sbjct: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120

Query: 121 KDLNNLENQLEFSLQSIRIKK 142
           KDLNNLENQLEFSLQSIRIKK
Sbjct: 121 KDLNNLENQLEFSLQSIRIKK 141

[Close]

BLAST of IVF0008744 vs. ExPASy TrEMBL
Match: A0A1S3B1W8 (MADS-box transcription factor 23 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484916 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.2e-68
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60

Query: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120
           SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI
Sbjct: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120

Query: 121 KDLNNLENQLEFSLQSIRIKK 142
           KDLNNLENQLEFSLQSIRIKK
Sbjct: 121 KDLNNLENQLEFSLQSIRIKK 141

[Close]

BLAST of IVF0008744 vs. ExPASy TrEMBL
Match: A0A1S3B214 (MADS-box transcription factor 23 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484916 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.5e-64
Identity = 138/141 (97.87%), Postives = 138/141 (97.87%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60

Query: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120
           SMHSIIEKYNRRKEEDELLLNPISDVK   KEVTTLRQQLHNLQENNRKLMGEQLYGLSI
Sbjct: 61  SMHSIIEKYNRRKEEDELLLNPISDVK---KEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120

Query: 121 KDLNNLENQLEFSLQSIRIKK 142
           KDLNNLENQLEFSLQSIRIKK
Sbjct: 121 KDLNNLENQLEFSLQSIRIKK 138

[Close]

BLAST of IVF0008744 vs. ExPASy TrEMBL
Match: A0A6J1BUC2 (MADS-box transcription factor 23-like OS=Momordica charantia OX=3673 GN=LOC111005852 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.0e-61
Identity = 127/141 (90.07%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGL+KKAKEL+ILCDAE+GLIIFSSSGKHYEFAS+
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLLKKAKELAILCDAEIGLIIFSSSGKHYEFAST 60

Query: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120
           S+ SIIEKYNRRKEEDELLLNP SD+KLWQKEV  LRQQL NL+ENNRKLMGEQLYGLS+
Sbjct: 61  SIESIIEKYNRRKEEDELLLNPASDLKLWQKEVAILRQQLLNLEENNRKLMGEQLYGLSV 120

Query: 121 KDLNNLENQLEFSLQSIRIKK 142
           KDLN+LENQLEFSLQSIRIKK
Sbjct: 121 KDLNSLENQLEFSLQSIRIKK 141

[Close]

BLAST of IVF0008744 vs. NCBI nr
Match: XP_008440515.1 (PREDICTED: MADS-box transcription factor 23 isoform X4 [Cucumis melo])

HSP 1 Score: 270 bits (689), Expect = 7.64e-90
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60

Query: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120
           SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI
Sbjct: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120

Query: 121 KDLNNLENQLEFSLQSIRIKK 141
           KDLNNLENQLEFSLQSIRIKK
Sbjct: 121 KDLNNLENQLEFSLQSIRIKK 141

[Close]

BLAST of IVF0008744 vs. NCBI nr
Match: XP_008440514.1 (PREDICTED: MADS-box transcription factor 23 isoform X3 [Cucumis melo])

HSP 1 Score: 270 bits (689), Expect = 1.78e-89
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60

Query: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120
           SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI
Sbjct: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120

Query: 121 KDLNNLENQLEFSLQSIRIKK 141
           KDLNNLENQLEFSLQSIRIKK
Sbjct: 121 KDLNNLENQLEFSLQSIRIKK 141

[Close]

BLAST of IVF0008744 vs. NCBI nr
Match: XP_008440512.1 (PREDICTED: MADS-box transcription factor 23 isoform X1 [Cucumis melo])

HSP 1 Score: 270 bits (689), Expect = 2.85e-89
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60

Query: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120
           SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI
Sbjct: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120

Query: 121 KDLNNLENQLEFSLQSIRIKK 141
           KDLNNLENQLEFSLQSIRIKK
Sbjct: 121 KDLNNLENQLEFSLQSIRIKK 141

[Close]

BLAST of IVF0008744 vs. NCBI nr
Match: XP_031742506.1 (MADS-box transcription factor 23 isoform X1 [Cucumis sativus])

HSP 1 Score: 268 bits (686), Expect = 6.66e-89
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60

Query: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120
           SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLS+
Sbjct: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSM 120

Query: 121 KDLNNLENQLEFSLQSIRIKK 141
           KDLNNLENQLEFSLQSIRIKK
Sbjct: 121 KDLNNLENQLEFSLQSIRIKK 141

[Close]

BLAST of IVF0008744 vs. NCBI nr
Match: XP_038882310.1 (MADS-box transcription factor 23-like [Benincasa hispida])

HSP 1 Score: 263 bits (671), Expect = 1.37e-86
Identity = 137/141 (97.16%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGK+YEFAS+
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKYYEFAST 60

Query: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120
           S+HSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI
Sbjct: 61  SIHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120

Query: 121 KDLNNLENQLEFSLQSIRIKK 141
           KDLNNLE+QLEFSLQSIRIKK
Sbjct: 121 KDLNNLESQLEFSLQSIRIKK 141

[Close]

BLAST of IVF0008744 vs. TAIR 10
Match: AT4G37940.1 (AGAMOUS-like 21 )

HSP 1 Score: 199.1 bits (505), Expect = 2.5e-51
Identity = 101/141 (71.63%), Postives = 124/141 (87.94%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60
           MGRGKIVI+RID+S SRQVTFSKRRKGLIKKAKEL+ILCDAEVGLIIFSS+GK Y+FASS
Sbjct: 1   MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60

Query: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120
           SM S+I++YN+ K E + LLNP S+VK WQ+E   LRQ+LH LQEN+R++MGEQL GLS+
Sbjct: 61  SMKSVIDRYNKSKIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSV 120

Query: 121 KDLNNLENQLEFSLQSIRIKK 142
            +LN+LENQ+E SL+ IR++K
Sbjct: 121 NELNSLENQIEISLRGIRMRK 141

[Close]

BLAST of IVF0008744 vs. TAIR 10
Match: AT2G14210.1 (AGAMOUS-like 44 )

HSP 1 Score: 182.2 bits (461), Expect = 3.1e-46
Identity = 98/142 (69.01%), Postives = 119/142 (83.80%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFAS- 60
           MGRGKIVIRRIDNS SRQVTFSKRR GL+KKAKELSILCDAEVG+IIFSS+GK Y++AS 
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASN 60

Query: 61  SSMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLS 120
           SSM +IIE+YNR KEE   LLN  S++K WQ+EV +L+QQL  LQE +RKL+GE+L G++
Sbjct: 61  SSMKTIIERYNRVKEEQHQLLNHASEIKFWQREVASLQQQLQYLQECHRKLVGEELSGMN 120

Query: 121 IKDLNNLENQLEFSLQSIRIKK 142
             DL NLE+QL  SL+ +R+KK
Sbjct: 121 ANDLQNLEDQLVTSLKGVRLKK 142

[Close]

BLAST of IVF0008744 vs. TAIR 10
Match: AT2G22630.1 (AGAMOUS-like 17 )

HSP 1 Score: 181.8 bits (460), Expect = 4.1e-46
Identity = 94/141 (66.67%), Postives = 120/141 (85.11%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60
           MGRGKIVI++ID+S SRQVTFSKRRKGLIKKAKEL+ILCDAEV LIIFS++ K Y+FASS
Sbjct: 1   MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASS 60

Query: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120
           S+ S IE++N  K E++ L+NP S+VK WQ+E  TLRQ+LH+LQEN R+L G +L GLS+
Sbjct: 61  SVKSTIERFNTAKMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSV 120

Query: 121 KDLNNLENQLEFSLQSIRIKK 142
           K+L N+E+QLE SL+ IR+K+
Sbjct: 121 KELQNIESQLEMSLRGIRMKR 141

[Close]

BLAST of IVF0008744 vs. TAIR 10
Match: AT3G57230.1 (AGAMOUS-like 16 )

HSP 1 Score: 180.6 bits (457), Expect = 9.1e-46
Identity = 91/141 (64.54%), Postives = 118/141 (83.69%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60
           MGRGKI I+RI+NS SRQVTFSKRR GL+KKAKEL+ILCDAEVG+IIFSS+G+ Y+F+SS
Sbjct: 1   MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60

Query: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120
           SM S+IE+Y+  K E     +P S+++ WQKE   L++QLHNLQEN+R++MGE+L GLS+
Sbjct: 61  SMKSVIERYSDAKGETSSENDPASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSV 120

Query: 121 KDLNNLENQLEFSLQSIRIKK 142
           + L NLENQLE SL+ +R+KK
Sbjct: 121 EALQNLENQLELSLRGVRMKK 141

[Close]

BLAST of IVF0008744 vs. TAIR 10
Match: AT3G57230.2 (AGAMOUS-like 16 )

HSP 1 Score: 144.8 bits (364), Expect = 5.5e-35
Identity = 80/142 (56.34%), Postives = 111/142 (78.17%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60
           MGRGKI I+RI+NS SRQVTFSKRR GL+KKAKEL+ILCDAEVG+IIFSS+G+ Y+F+SS
Sbjct: 1   MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60

Query: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQ-ENNRKLMGEQLYGLS 120
           SM S+IE+Y+  K E     +P S+++  +  + TL +  ++ +   +R++MGE+L GLS
Sbjct: 61  SMKSVIERYSDAKGETSSENDPASEIQ--EMYIVTLEKYAYSEELVLDRQMMGEELSGLS 120

Query: 121 IKDLNNLENQLEFSLQSIRIKK 142
           ++ L NLENQLE SL+ +R+KK
Sbjct: 121 VEALQNLENQLELSLRGVRMKK 140

The following BLAST results are available for this feature:

BLAST of IVF0008744 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZJ6	3.5e-50	71.63	Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana OX=3702 GN=AGL21 PE=...	[more]
Q6EP49	2.5e-48	67.38	MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
Q6VAM4	2.6e-45	65.25	MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
Q9SI38	4.4e-45	69.01	MADS-box transcription factor ANR1 OS=Arabidopsis thaliana OX=3702 GN=ANR1 PE=1 ...	[more]
Q38840	5.7e-45	66.67	Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana OX=3702 GN=AGL17 PE=...	[more]

BLAST of IVF0008744 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B0V7	2.2e-68	100.00	MADS-box transcription factor 23 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484...	[more]
A0A1S3B1B7	2.2e-68	100.00	MADS-box transcription factor 23 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103484...	[more]
A0A1S3B1W8	2.2e-68	100.00	MADS-box transcription factor 23 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484...	[more]
A0A1S3B214	1.5e-64	97.87	MADS-box transcription factor 23 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484...	[more]
A0A6J1BUC2	2.0e-61	90.07	MADS-box transcription factor 23-like OS=Momordica charantia OX=3673 GN=LOC11100...	[more]

BLAST of IVF0008744 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440515.1	7.64e-90	100.00	PREDICTED: MADS-box transcription factor 23 isoform X4 [Cucumis melo]	[more]
XP_008440514.1	1.78e-89	100.00	PREDICTED: MADS-box transcription factor 23 isoform X3 [Cucumis melo]	[more]
XP_008440512.1	2.85e-89	100.00	PREDICTED: MADS-box transcription factor 23 isoform X1 [Cucumis melo]	[more]
XP_031742506.1	6.66e-89	99.29	MADS-box transcription factor 23 isoform X1 [Cucumis sativus]	[more]
XP_038882310.1	1.37e-86	97.16	MADS-box transcription factor 23-like [Benincasa hispida]	[more]

BLAST of IVF0008744 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37940.1	2.5e-51	71.63	AGAMOUS-like 21	[more]
AT2G14210.1	3.1e-46	69.01	AGAMOUS-like 44	[more]
AT2G22630.1	4.1e-46	66.67	AGAMOUS-like 17	[more]
AT3G57230.1	9.1e-46	64.54	AGAMOUS-like 16	[more]
AT3G57230.2	5.5e-35	56.34	AGAMOUS-like 16	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 86..113
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..141
None	No IPR available	PANTHER	PTHR48019:SF83	MADS-BOX TRANSCRIPTION FACTOR 23 ISOFORM X1	coord: 1..141
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 60.87 coord: 38..59 score: 62.99 coord: 23..38 score: 71.33
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 8.6E-38 score: 141.5
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 1.3E-24 score: 85.5
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 30.767738
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 85..141 e-value: 1.8E-17 score: 63.3
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 86..150 score: 10.358993
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..82 e-value: 1.9E-28 score: 100.3
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..78
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..77 e-value: 3.59373E-41 score: 130.365

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0008744.2	IVF0008744.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding