IVF0008740 (gene) Melon (IVF77) v1

Overview


Name	IVF0008740
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Retrotrans_gag domain-containing protein
Location	chr10: 15510028 .. 15511401 (-)
RNA-Seq Expression	IVF0008740
Synteny	IVF0008740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGGGTTAATGGATGAGCTAATCCAGGATAACGTGGAGATCTCGAATGCCGCCAAGGAAATGATCAAAGTCCTTGGAGACTCACACGGTAAGGAGATGTATGATATTCTTGTTGAGGTAACTAACTTACGGAAGTTCGTGGAAGAAGAACTTCACGCCTTGCGAAAGAACGTTGACGAGGTACGTGCCGAATGGCACTCTAGACATGCTAGCAATGGTAATGCATCCACTAGCACATCATGCACCATGGTAGGCACTCACAACATCAAAGTGCCGAAACCCGACACGTATAATGGCACGAGGAATGCCACGATGGTGGAAAATTTCCTATTTGGCCTTGAACAGTATTATAAGGCCTTAGGAATCATCGACGATGGTGCCAAAATTGCAAACGCCCCAAATTTCCTACGTGAGTCGGCACAATTATGGTGGCGTAGGAAGCATGCGGAATGGGAGAAGGACCGCACGATCTTGCAGACGTGGGAACAATTCAAGGCAGAACTTCGAAAGCATTTTGTTCCCCACAATGCGGATATGGAGGCGCGAGGTAAGTTGAGGAGATTAAGGCAAATCGGTAGCATTCCCGATTACATAAAGGAGTTCACTACTCTAATGTTGGAGATAGAAGATCTATCGGACAAAGATGCTCTCTTTCATTTTAGAGACGATCTTAAAGATTGGGCGAAGATCGAGCTCGATAGACGCAATGTGCGAACTCTTGATGATGCTATTGCCGCAGCTGGAGCGCTTATCGACATCTACTCCAAGGAAAAGAAGAGGCGTGTAGATGAAGGAGAAGCGTTCGAACCAAAGAAGGAGGGGAACTCTAAGCAAGACGGGAAGTATGGAAAAGCCCCATTTGCCAACAAAGATACGATACCTCCAACTTGTTTCTTATGTAAAGGTCCACATTGGACAAGAGATTGTCCAAAGAAGAACAAATTGAGTGCAATCGTGGCCAATCCACGGGAAGAAGAGGAAGTACCCATTAAGGGGACGGCACAGTTAGGTGGAATCCGATACCTAAGTGCCATGAAGAGTGAATCCTCTAAAGAACCTCAAGAAGGAGGTTTGTTGTATGTGGATGCCACGTTCAACAACAAGGCTGCCTTAGCGATGTTAGACGCTGGCGCAACCCATAATGTAATGGATCCTGAAGAGGCAAAGCGGCTAGGCCTCAGGACCACCAGGAGAAGCGACACTGAGATAAAGATCATCAGTGCCAAATCCATGAAGAACATTGGATGGGCTCAGGATGTCAAGACAAGGGTAGGAGGATGGCAAGGTAAGCTCAATTTTCTCATAGCCCATCTTGACGATTGTAAGATAATCCTAGGATTGGACTTCGTTGATACAGCCCATTCTTCATGA

mRNA sequence

ATGAGCGGGTTAATGGATGAGCTAATCCAGGATAACGTGGAGATCTCGAATGCCGCCAAGGAAATGATCAAAGTCCTTGGAGACTCACACGGTAAGGAGATGTATGATATTCTTGTTGAGGTAACTAACTTACGGAAGTTCGTGGAAGAAGAACTTCACGCCTTGCGAAAGAACGTTGACGAGGTACGTGCCGAATGGCACTCTAGACATGCTAGCAATGGTAATGCATCCACTAGCACATCATGCACCATGGTAGGCACTCACAACATCAAAGTGCCGAAACCCGACACGTATAATGGCACGAGGAATGCCACGATGGTGGAAAATTTCCTATTTGGCCTTGAACAGTATTATAAGGCCTTAGGAATCATCGACGATGGTGCCAAAATTGCAAACGCCCCAAATTTCCTACGTGAGTCGGCACAATTATGGTGGCGTAGGAAGCATGCGGAATGGGAGAAGGACCGCACGATCTTGCAGACGTGGGAACAATTCAAGGCAGAACTTCGAAAGCATTTTGTTCCCCACAATGCGGATATGGAGGCGCGAGGTAAGTTGAGGAGATTAAGGCAAATCGGTAGCATTCCCGATTACATAAAGGAGTTCACTACTCTAATGTTGGAGATAGAAGATCTATCGGACAAAGATGCTCTCTTTCATTTTAGAGACGATCTTAAAGATTGGGCGAAGATCGAGCTCGATAGACGCAATGTGCGAACTCTTGATGATGCTATTGCCGCAGCTGGAGCGCTTATCGACATCTACTCCAAGGAAAAGAAGAGGCGTGTAGATGAAGGAGAAGCGTTCGAACCAAAGAAGGAGGGGAACTCTAAGCAAGACGGGAAGTATGGAAAAGCCCCATTTGCCAACAAAGATACGATACCTCCAACTTGTTTCTTATGTAAAGGTCCACATTGGACAAGAGATTGTCCAAAGAAGAACAAATTGAGTGCAATCGTGGCCAATCCACGGGAAGAAGAGGAAGTACCCATTAAGGGGACGGCACAGTTAGGTGGAATCCGATACCTAAGTGCCATGAAGAGTGAATCCTCTAAAGAACCTCAAGAAGGAGGTTTGTTGTATGTGGATGCCACGTTCAACAACAAGGCTGCCTTAGCGATGTTAGACGCTGGCGCAACCCATAATGTAATGGATCCTGAAGAGGCAAAGCGGCTAGGCCTCAGGACCACCAGGAGAAGCGACACTGAGATAAAGATCATCAGTGCCAAATCCATGAAGAACATTGGATGGGCTCAGGATGTCAAGACAAGGGTAGGAGGATGGCAAGGTAAGCTCAATTTTCTCATAGCCCATCTTGACGATTGTAAGATAATCCTAGGATTGGACTTCGTTGATACAGCCCATTCTTCATGA

Coding sequence (CDS)

ATGAGCGGGTTAATGGATGAGCTAATCCAGGATAACGTGGAGATCTCGAATGCCGCCAAGGAAATGATCAAAGTCCTTGGAGACTCACACGGTAAGGAGATGTATGATATTCTTGTTGAGGTAACTAACTTACGGAAGTTCGTGGAAGAAGAACTTCACGCCTTGCGAAAGAACGTTGACGAGGTACGTGCCGAATGGCACTCTAGACATGCTAGCAATGGTAATGCATCCACTAGCACATCATGCACCATGGTAGGCACTCACAACATCAAAGTGCCGAAACCCGACACGTATAATGGCACGAGGAATGCCACGATGGTGGAAAATTTCCTATTTGGCCTTGAACAGTATTATAAGGCCTTAGGAATCATCGACGATGGTGCCAAAATTGCAAACGCCCCAAATTTCCTACGTGAGTCGGCACAATTATGGTGGCGTAGGAAGCATGCGGAATGGGAGAAGGACCGCACGATCTTGCAGACGTGGGAACAATTCAAGGCAGAACTTCGAAAGCATTTTGTTCCCCACAATGCGGATATGGAGGCGCGAGGTAAGTTGAGGAGATTAAGGCAAATCGGTAGCATTCCCGATTACATAAAGGAGTTCACTACTCTAATGTTGGAGATAGAAGATCTATCGGACAAAGATGCTCTCTTTCATTTTAGAGACGATCTTAAAGATTGGGCGAAGATCGAGCTCGATAGACGCAATGTGCGAACTCTTGATGATGCTATTGCCGCAGCTGGAGCGCTTATCGACATCTACTCCAAGGAAAAGAAGAGGCGTGTAGATGAAGGAGAAGCGTTCGAACCAAAGAAGGAGGGGAACTCTAAGCAAGACGGGAAGTATGGAAAAGCCCCATTTGCCAACAAAGATACGATACCTCCAACTTGTTTCTTATGTAAAGGTCCACATTGGACAAGAGATTGTCCAAAGAAGAACAAATTGAGTGCAATCGTGGCCAATCCACGGGAAGAAGAGGAAGTACCCATTAAGGGGACGGCACAGTTAGGTGGAATCCGATACCTAAGTGCCATGAAGAGTGAATCCTCTAAAGAACCTCAAGAAGGAGGTTTGTTGTATGTGGATGCCACGTTCAACAACAAGGCTGCCTTAGCGATGTTAGACGCTGGCGCAACCCATAATGTAATGGATCCTGAAGAGGCAAAGCGGCTAGGCCTCAGGACCACCAGGAGAAGCGACACTGAGATAAAGATCATCAGTGCCAAATCCATGAAGAACATTGGATGGGCTCAGGATGTCAAGACAAGGGTAGGAGGATGGCAAGGTAAGCTCAATTTTCTCATAGCCCATCTTGACGATTGTAAGATAATCCTAGGATTGGACTTCGTTGATACAGCCCATTCTTCATGA

Protein sequence

MSGLMDELIQDNVEISNAAKEMIKVLGDSHGKEMYDILVEVTNLRKFVEEELHALRKNVDEVRAEWHSRHASNGNASTSTSCTMVGTHNIKVPKPDTYNGTRNATMVENFLFGLEQYYKALGIIDDGAKIANAPNFLRESAQLWWRRKHAEWEKDRTILQTWEQFKAELRKHFVPHNADMEARGKLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDDLKDWAKIELDRRNVRTLDDAIAAAGALIDIYSKEKKRRVDEGEAFEPKKEGNSKQDGKYGKAPFANKDTIPPTCFLCKGPHWTRDCPKKNKLSAIVANPREEEEVPIKGTAQLGGIRYLSAMKSESSKEPQEGGLLYVDATFNNKAALAMLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQDVKTRVGGWQGKLNFLIAHLDDCKIILGLDFVDTAHSS

Homology

[Close]

BLAST of IVF0008740 vs. ExPASy TrEMBL
Match: A0A5A7T2W8 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00550 PE=4 SV=1)

HSP 1 Score: 922.9 bits (2384), Expect = 5.1e-265
Identity = 457/457 (100.00%), Postives = 457/457 (100.00%), Query Frame = 0


Query: 1   MSGLMDELIQDNVEISNAAKEMIKVLGDSHGKEMYDILVEVTNLRKFVEEELHALRKNVD 60
           MSGLMDELIQDNVEISNAAKEMIKVLGDSHGKEMYDILVEVTNLRKFVEEELHALRKNVD
Sbjct: 1   MSGLMDELIQDNVEISNAAKEMIKVLGDSHGKEMYDILVEVTNLRKFVEEELHALRKNVD 60

Query: 61  EVRAEWHSRHASNGNASTSTSCTMVGTHNIKVPKPDTYNGTRNATMVENFLFGLEQYYKA 120
           EVRAEWHSRHASNGNASTSTSCTMVGTHNIKVPKPDTYNGTRNATMVENFLFGLEQYYKA
Sbjct: 61  EVRAEWHSRHASNGNASTSTSCTMVGTHNIKVPKPDTYNGTRNATMVENFLFGLEQYYKA 120

Query: 121 LGIIDDGAKIANAPNFLRESAQLWWRRKHAEWEKDRTILQTWEQFKAELRKHFVPHNADM 180
           LGIIDDGAKIANAPNFLRESAQLWWRRKHAEWEKDRTILQTWEQFKAELRKHFVPHNADM
Sbjct: 121 LGIIDDGAKIANAPNFLRESAQLWWRRKHAEWEKDRTILQTWEQFKAELRKHFVPHNADM 180

Query: 181 EARGKLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDDLKDWAKIELDRRNVRT 240
           EARGKLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDDLKDWAKIELDRRNVRT
Sbjct: 181 EARGKLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDDLKDWAKIELDRRNVRT 240

Query: 241 LDDAIAAAGALIDIYSKEKKRRVDEGEAFEPKKEGNSKQDGKYGKAPFANKDTIPPTCFL 300
           LDDAIAAAGALIDIYSKEKKRRVDEGEAFEPKKEGNSKQDGKYGKAPFANKDTIPPTCFL
Sbjct: 241 LDDAIAAAGALIDIYSKEKKRRVDEGEAFEPKKEGNSKQDGKYGKAPFANKDTIPPTCFL 300

Query: 301 CKGPHWTRDCPKKNKLSAIVANPREEEEVPIKGTAQLGGIRYLSAMKSESSKEPQEGGLL 360
           CKGPHWTRDCPKKNKLSAIVANPREEEEVPIKGTAQLGGIRYLSAMKSESSKEPQEGGLL
Sbjct: 301 CKGPHWTRDCPKKNKLSAIVANPREEEEVPIKGTAQLGGIRYLSAMKSESSKEPQEGGLL 360

Query: 361 YVDATFNNKAALAMLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQD 420
           YVDATFNNKAALAMLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQD
Sbjct: 361 YVDATFNNKAALAMLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQD 420

Query: 421 VKTRVGGWQGKLNFLIAHLDDCKIILGLDFVDTAHSS 458
           VKTRVGGWQGKLNFLIAHLDDCKIILGLDFVDTAHSS
Sbjct: 421 VKTRVGGWQGKLNFLIAHLDDCKIILGLDFVDTAHSS 457

[Close]

BLAST of IVF0008740 vs. ExPASy TrEMBL
Match: A0A5A7SY30 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00560 PE=4 SV=1)

HSP 1 Score: 716.8 bits (1849), Expect = 5.6e-203
Identity = 360/389 (92.54%), Postives = 369/389 (94.86%), Query Frame = 0


Query: 1   MSGLMDELIQDNVEISNAAKEMIKVLGDSHGKEMYDILVEVTNLRKFVEEELHALRKNVD 60
           MSGLMDELIQDNVEISNAAKEMIK LGDSHGKEMYD+LVEVTNLRKFVEEELHALRKNVD
Sbjct: 1   MSGLMDELIQDNVEISNAAKEMIKDLGDSHGKEMYDLLVEVTNLRKFVEEELHALRKNVD 60

Query: 61  EVRAEWHSRHASNGNASTSTSCTMVGTHNIKVPKPDTYNGTRNATMVENFLFGLEQYYKA 120
           EVRAE HSRHASNGNASTSTSCT+VGTHNIKVPKPD YNGTRNATMVENFLFGLEQYYKA
Sbjct: 61  EVRAECHSRHASNGNASTSTSCTVVGTHNIKVPKPDMYNGTRNATMVENFLFGLEQYYKA 120

Query: 121 LGIIDDGAKIANAPNFLRESAQLWWRRKHAEWEKDRTILQTWEQFKAELRKHFVPHNADM 180
           LGI+DDGAKIANAPNFL ESAQLWW RKHAEWEKDRTIL TW QFKAELRKHFV HNA+M
Sbjct: 121 LGIVDDGAKIANAPNFLHESAQLWWHRKHAEWEKDRTILHTWRQFKAELRKHFVLHNANM 180

Query: 181 EARGKLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDDLKDWAKIELDRRNVRT 240
           EARGKLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRD LKDWAKIELDRRNVRT
Sbjct: 181 EARGKLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDGLKDWAKIELDRRNVRT 240

Query: 241 LDDAIAAAGALIDIYSKEKKRRVDEGEAFEPKKEGNSKQDGKYGKAPFANKDTIPPTCFL 300
           LDDAIAAA ALIDIY KEKK RVDEGEAFEP KE NSKQD KYGK PFAN+DT PPTCFL
Sbjct: 241 LDDAIAAAKALIDIYFKEKKTRVDEGEAFEP-KEWNSKQDEKYGKTPFANRDTTPPTCFL 300

Query: 301 CKGPHWTRDCPKKNKLSAIVANPREEEEVPIKGTAQLGGIRYLSAMKSESSKEPQEGGLL 360
           CKGPH TR+CPK+NKLSAIVANPREEEEVPIKGTAQLG IRYLSAMKS+SSKEPQEGG L
Sbjct: 301 CKGPHRTRECPKRNKLSAIVANPREEEEVPIKGTAQLGAIRYLSAMKSDSSKEPQEGGWL 360

Query: 361 YVDATFNNKAALAMLDAGATHNVMDPEEA 390
           YVDATFNNKAALAMLDAGATHNVM+PEEA
Sbjct: 361 YVDATFNNKAALAMLDAGATHNVMNPEEA 388

[Close]

BLAST of IVF0008740 vs. ExPASy TrEMBL
Match: A0A5D3BUR0 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00660 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 1.0e-132
Identity = 259/416 (62.26%), Postives = 290/416 (69.71%), Query Frame = 0


Query: 1   MSGLMDELIQDNVEISNAAKEMIKVLGDSHGKEMYDILVEVTNLRKFVEEELHALRKNVD 60
           MSG M+ELIQDN+EIS   KEMIK LG S+GKEMYD+LVEVTNLRKFV+EELH LRK+VD
Sbjct: 39  MSGFMEELIQDNMEISKVTKEMIKGLGGSYGKEMYDLLVEVTNLRKFVKEELHVLRKDVD 98

Query: 61  EVRAEWHSRHASNGNASTSTSCTMVGTHNIKVPKPDTYNGTRNATMVENFLFGLEQYYKA 120
           E   E H                                       VENFLFGLEQYY+A
Sbjct: 99  EWHEECHD--------------------------------------VENFLFGLEQYYEA 158

Query: 121 LGIIDDGAKIANAPNFLRESAQLWWRRKHAEWEKDRTILQTWEQFKAELRKHFVPHNADM 180
           LGI+DDGA +ANAP FL +S                           ELRKHFVP+NADM
Sbjct: 159 LGIVDDGANVANAPTFLPKS--------------------------VELRKHFVPYNADM 218

Query: 181 EARGKLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDDLKDWAKIELDRRNVRT 240
           EAR KLRRLRQ G IP+YIKEFTTLML+ E LSDKDALFHFRDDLKDWAKIELDRRN++T
Sbjct: 219 EARSKLRRLRQTGGIPEYIKEFTTLMLKTEYLSDKDALFHFRDDLKDWAKIELDRRNIQT 278

Query: 241 LDDAIAAAGALIDIYSKEKKRRVDEGEAFEPKKEGNSKQDGKYGKAPFANKDTIPPTCFL 300
           LDDAIA    LI++  KEKK  +DEG+  E KK+GNSKQ GK GKA FANK T P  CFL
Sbjct: 279 LDDAIATVKLLINLSFKEKKTCIDEGDRSEAKKDGNSKQGGKNGKALFANKGTTPEPCFL 338

Query: 301 CKGPHWTRDCPKKNKLSAIVANPREEEEVPIKGTAQLGGIRYLSAMKSESSKEPQEGGLL 360
           C GPHW RDCPKKNKLSA+VANP +EEE P+KG+AQL  IRYLS M+++ SKEPQ GG L
Sbjct: 339 CNGPHWARDCPKKNKLSAMVANPYDEEEAPMKGSAQLSAIRYLSPMENDFSKEPQNGGWL 390

Query: 361 YVDATFNNKAALAMLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIG 417
           YVD   N+K AL +LD     NVMDPEEAK+LGLR TRRSDTEIKIISAK M+N G
Sbjct: 399 YVDTMLNSKVALTILDTCTIENVMDPEEAKQLGLRITRRSDTEIKIISAKPMRNTG 390

[Close]

BLAST of IVF0008740 vs. ExPASy TrEMBL
Match: A0A5A7VEX8 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00510 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 2.2e-114
Identity = 229/472 (48.52%), Postives = 310/472 (65.68%), Query Frame = 0


Query: 1   MSGLMDELIQDNVEISNAAKEMIKVLGDSHGKEMYDILVEVTNLRKFVEEELHAL----- 60
           +S   +EL+Q+N EI++ AKEMI+ +G +  +E+ ++   VT L+ FVE ELH L     
Sbjct: 65  LSENFEELVQENAEITSVAKEMIEDMGRTFQEELKELTSTVTTLKAFVEGELHNLHTKSI 124

Query: 61  --RKNVDEVRAEWHSRHASNGNASTSTSCTMVGTHNIKVPKPDTYNGTRNATMVENFLFG 120
                +D +  E  S+H  +   STST  T  GT NIKVPKPD YNG RNAT+V+NFLFG
Sbjct: 125 SFETRLDALCVECRSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVDNFLFG 184

Query: 121 LEQYYKALGIIDDGAKIANAPNFLRESAQLWWRRKHAEWEKDRTILQTWEQFKAELRKHF 180
           LE+Y+ ALG+ DD A+I +AP FLR++AQLWWRRK+A  ++    + +WEQFKAELRKHF
Sbjct: 185 LERYFVALGVRDDEARINHAPTFLRDAAQLWWRRKYA--DQSGNAIHSWEQFKAELRKHF 244

Query: 181 VPHNADMEARGKLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDDLKDWAKIEL 240
           VPHNA++E+RGKLRRLR  GSI +Y+KEFTTLMLEI DL +K+ALF F+D LKDWAKIEL
Sbjct: 245 VPHNAEIESRGKLRRLRHTGSILEYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIEL 304

Query: 241 DRRNVRTLDDAIAAAGALIDIYSKEKKR---------RVDEGEAFEPKKEGNSK----QD 300
           DRRNV+TLDDAIAAA  L+D  ++ K +         + D+ + F  +  G  K    ++
Sbjct: 305 DRRNVQTLDDAIAAAETLVDYSAQSKGKKPGPEKYGGKSDKTKNFGRRDGGKVKTFQWKN 364

Query: 301 GKYGKAPFANKDTIPPTCFLCKGPHWTRDCPKKNKLSAIVANPREEEEVPIKGTAQLGGI 360
           GK   A        P  CF+CKGPHWTRDCP +  L+A+VA  +E ++V      Q+G +
Sbjct: 365 GKNDGAHRGESSNPPKPCFICKGPHWTRDCPNQKALNALVAKFQEIKQVEDAPGPQIGSM 424

Query: 361 RYLSAMKSESSKEPQEGGLLYVDATFNNKAALAMLDAGATHNVMDPEEAKRLGLRTTRRS 420
           + +  MK E++ E +  GLLY       K A AM D GA+HN MD +EAKRLGL+    +
Sbjct: 425 QQIGVMKKETTVEHK--GLLYGSIRIEGKEATAMFDTGASHNFMDVQEAKRLGLKYKEET 484

Query: 421 DTEIKIISAKSMKNIGWAQDVKTRVGGWQGKLNFLIAHLDDCKIILGLDFVD 453
            T +K+++AK     G A+ V  ++G WQ +L+F +  +DD  I+LGL F D
Sbjct: 485 GT-VKVVNAKEQTIHGVAKGVLVKIGDWQKRLDFSVLPMDDFNIVLGLGFFD 531

[Close]

BLAST of IVF0008740 vs. ExPASy TrEMBL
Match: A0A5A7THC0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold370G00130 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 2.8e-114
Identity = 228/472 (48.31%), Postives = 308/472 (65.25%), Query Frame = 0


Query: 1   MSGLMDELIQDNVEISNAAKEMIKVLGDSHGKEMYDILVEVTNLRKFVEEELHAL----- 60
           +S + +EL+Q+N EI++ AKEMI+ +G +  KE+ ++   VT L+ FVE ELH L     
Sbjct: 65  LSEIFEELVQENAEITSVAKEMIEDMGRTFQKELRELASTVTTLKAFVEGELHDLHTKSI 124

Query: 61  --RKNVDEVRAEWHSRHASNGNASTSTSCTMVGTHNIKVPKPDTYNGTRNATMVENFLFG 120
                +D +  E  S+H  +   STST  T  GT NIKVPKPD YNG RNAT+V+NFLFG
Sbjct: 125 SFETRLDALCVECRSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVDNFLFG 184

Query: 121 LEQYYKALGIIDDGAKIANAPNFLRESAQLWWRRKHAEWEKDRTILQTWEQFKAELRKHF 180
           LE+Y+ ALG+ DD A+I +AP FLR++AQLWWRRK+A  ++    + +WEQFKAELRKHF
Sbjct: 185 LERYFVALGVRDDEARINHAPTFLRDAAQLWWRRKYA--DQSGNAIHSWEQFKAELRKHF 244

Query: 181 VPHNADMEARGKLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDDLKDWAKIEL 240
           VPHNA++E+RGKLRRLR  GSI DY+KEFTTLMLEI DL +K+ALF F+D LKDWAKIEL
Sbjct: 245 VPHNAEIESRGKLRRLRHTGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIEL 304

Query: 241 DRRNVRTLDDAIAAAGALIDIYSKEKKR---------RVDEGEAFEPKKEGNSK----QD 300
           DRRNV+TLDDAIA A  L+D  ++ K +         + D+ + F  K  G  K    ++
Sbjct: 305 DRRNVQTLDDAIAVAETLVDYSAQSKGKKPGPEKHGGKSDKTKNFGRKDGGKVKTFQWKN 364

Query: 301 GKYGKAPFANKDTIPPTCFLCKGPHWTRDCPKKNKLSAIVANPREEEEVPIKGTAQLGGI 360
           GK   A        P  CF+CKGPHWTRDCP +  L+A+VA  +E ++V      Q+G +
Sbjct: 365 GKNDGAHRGESSNPPKPCFICKGPHWTRDCPNRKALNALVAKFQEIKQVEDAPGPQIGSM 424

Query: 361 RYLSAMKSESSKEPQEGGLLYVDATFNNKAALAMLDAGATHNVMDPEEAKRLGLRTTRRS 420
           + +  MK E++ E +  GLLY       K A  M D GA+HN +D +EAKRLGL+    +
Sbjct: 425 QQIGVMKKETTVEHK--GLLYGSIRIEGKEATTMFDTGASHNFIDVQEAKRLGLKFKEET 484

Query: 421 DTEIKIISAKSMKNIGWAQDVKTRVGGWQGKLNFLIAHLDDCKIILGLDFVD 453
              +K+++AK     G A+ V  ++G WQ +L+F +  +DD  I+LGL F D
Sbjct: 485 GI-VKVVNAKEQAIHGVAKGVLVKIGDWQKRLDFSVLPMDDFNIVLGLGFFD 531

[Close]

BLAST of IVF0008740 vs. NCBI nr
Match: KAA0035961.1 (uncharacterized protein E6C27_scaffold56G001660 [Cucumis melo var. makuwa] >TYK30442.1 uncharacterized protein E5676_scaffold349G00550 [Cucumis melo var. makuwa])

HSP 1 Score: 920 bits (2377), Expect = 0.0
Identity = 457/457 (100.00%), Postives = 457/457 (100.00%), Query Frame = 0


Query: 1   MSGLMDELIQDNVEISNAAKEMIKVLGDSHGKEMYDILVEVTNLRKFVEEELHALRKNVD 60
           MSGLMDELIQDNVEISNAAKEMIKVLGDSHGKEMYDILVEVTNLRKFVEEELHALRKNVD
Sbjct: 1   MSGLMDELIQDNVEISNAAKEMIKVLGDSHGKEMYDILVEVTNLRKFVEEELHALRKNVD 60

Query: 61  EVRAEWHSRHASNGNASTSTSCTMVGTHNIKVPKPDTYNGTRNATMVENFLFGLEQYYKA 120
           EVRAEWHSRHASNGNASTSTSCTMVGTHNIKVPKPDTYNGTRNATMVENFLFGLEQYYKA
Sbjct: 61  EVRAEWHSRHASNGNASTSTSCTMVGTHNIKVPKPDTYNGTRNATMVENFLFGLEQYYKA 120

Query: 121 LGIIDDGAKIANAPNFLRESAQLWWRRKHAEWEKDRTILQTWEQFKAELRKHFVPHNADM 180
           LGIIDDGAKIANAPNFLRESAQLWWRRKHAEWEKDRTILQTWEQFKAELRKHFVPHNADM
Sbjct: 121 LGIIDDGAKIANAPNFLRESAQLWWRRKHAEWEKDRTILQTWEQFKAELRKHFVPHNADM 180

Query: 181 EARGKLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDDLKDWAKIELDRRNVRT 240
           EARGKLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDDLKDWAKIELDRRNVRT
Sbjct: 181 EARGKLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDDLKDWAKIELDRRNVRT 240

Query: 241 LDDAIAAAGALIDIYSKEKKRRVDEGEAFEPKKEGNSKQDGKYGKAPFANKDTIPPTCFL 300
           LDDAIAAAGALIDIYSKEKKRRVDEGEAFEPKKEGNSKQDGKYGKAPFANKDTIPPTCFL
Sbjct: 241 LDDAIAAAGALIDIYSKEKKRRVDEGEAFEPKKEGNSKQDGKYGKAPFANKDTIPPTCFL 300

Query: 301 CKGPHWTRDCPKKNKLSAIVANPREEEEVPIKGTAQLGGIRYLSAMKSESSKEPQEGGLL 360
           CKGPHWTRDCPKKNKLSAIVANPREEEEVPIKGTAQLGGIRYLSAMKSESSKEPQEGGLL
Sbjct: 301 CKGPHWTRDCPKKNKLSAIVANPREEEEVPIKGTAQLGGIRYLSAMKSESSKEPQEGGLL 360

Query: 361 YVDATFNNKAALAMLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQD 420
           YVDATFNNKAALAMLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQD
Sbjct: 361 YVDATFNNKAALAMLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQD 420

Query: 421 VKTRVGGWQGKLNFLIAHLDDCKIILGLDFVDTAHSS 457
           VKTRVGGWQGKLNFLIAHLDDCKIILGLDFVDTAHSS
Sbjct: 421 VKTRVGGWQGKLNFLIAHLDDCKIILGLDFVDTAHSS 457

[Close]

BLAST of IVF0008740 vs. NCBI nr
Match: KAA0035960.1 (uncharacterized protein E6C27_scaffold56G001640 [Cucumis melo var. makuwa] >TYK30443.1 uncharacterized protein E5676_scaffold349G00560 [Cucumis melo var. makuwa])

HSP 1 Score: 715 bits (1845), Expect = 1.23e-257
Identity = 360/389 (92.54%), Postives = 369/389 (94.86%), Query Frame = 0


Query: 1   MSGLMDELIQDNVEISNAAKEMIKVLGDSHGKEMYDILVEVTNLRKFVEEELHALRKNVD 60
           MSGLMDELIQDNVEISNAAKEMIK LGDSHGKEMYD+LVEVTNLRKFVEEELHALRKNVD
Sbjct: 1   MSGLMDELIQDNVEISNAAKEMIKDLGDSHGKEMYDLLVEVTNLRKFVEEELHALRKNVD 60

Query: 61  EVRAEWHSRHASNGNASTSTSCTMVGTHNIKVPKPDTYNGTRNATMVENFLFGLEQYYKA 120
           EVRAE HSRHASNGNASTSTSCT+VGTHNIKVPKPD YNGTRNATMVENFLFGLEQYYKA
Sbjct: 61  EVRAECHSRHASNGNASTSTSCTVVGTHNIKVPKPDMYNGTRNATMVENFLFGLEQYYKA 120

Query: 121 LGIIDDGAKIANAPNFLRESAQLWWRRKHAEWEKDRTILQTWEQFKAELRKHFVPHNADM 180
           LGI+DDGAKIANAPNFL ESAQLWW RKHAEWEKDRTIL TW QFKAELRKHFV HNA+M
Sbjct: 121 LGIVDDGAKIANAPNFLHESAQLWWHRKHAEWEKDRTILHTWRQFKAELRKHFVLHNANM 180

Query: 181 EARGKLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDDLKDWAKIELDRRNVRT 240
           EARGKLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRD LKDWAKIELDRRNVRT
Sbjct: 181 EARGKLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDGLKDWAKIELDRRNVRT 240

Query: 241 LDDAIAAAGALIDIYSKEKKRRVDEGEAFEPKKEGNSKQDGKYGKAPFANKDTIPPTCFL 300
           LDDAIAAA ALIDIY KEKK RVDEGEAFEPK E NSKQD KYGK PFAN+DT PPTCFL
Sbjct: 241 LDDAIAAAKALIDIYFKEKKTRVDEGEAFEPK-EWNSKQDEKYGKTPFANRDTTPPTCFL 300

Query: 301 CKGPHWTRDCPKKNKLSAIVANPREEEEVPIKGTAQLGGIRYLSAMKSESSKEPQEGGLL 360
           CKGPH TR+CPK+NKLSAIVANPREEEEVPIKGTAQLG IRYLSAMKS+SSKEPQEGG L
Sbjct: 301 CKGPHRTRECPKRNKLSAIVANPREEEEVPIKGTAQLGAIRYLSAMKSDSSKEPQEGGWL 360

Query: 361 YVDATFNNKAALAMLDAGATHNVMDPEEA 389
           YVDATFNNKAALAMLDAGATHNVM+PEEA
Sbjct: 361 YVDATFNNKAALAMLDAGATHNVMNPEEA 388

[Close]

BLAST of IVF0008740 vs. NCBI nr
Match: KAA0064169.1 (uncharacterized protein E6C27_scaffold548G00940 [Cucumis melo var. makuwa] >TYK02860.1 uncharacterized protein E5676_scaffold218G00660 [Cucumis melo var. makuwa])

HSP 1 Score: 482 bits (1241), Expect = 9.14e-166
Identity = 259/416 (62.26%), Postives = 290/416 (69.71%), Query Frame = 0


Query: 1   MSGLMDELIQDNVEISNAAKEMIKVLGDSHGKEMYDILVEVTNLRKFVEEELHALRKNVD 60
           MSG M+ELIQDN+EIS   KEMIK LG S+GKEMYD+LVEVTNLRKFV+EELH LRK+VD
Sbjct: 39  MSGFMEELIQDNMEISKVTKEMIKGLGGSYGKEMYDLLVEVTNLRKFVKEELHVLRKDVD 98

Query: 61  EVRAEWHSRHASNGNASTSTSCTMVGTHNIKVPKPDTYNGTRNATMVENFLFGLEQYYKA 120
           E   E H                                       VENFLFGLEQYY+A
Sbjct: 99  EWHEECHD--------------------------------------VENFLFGLEQYYEA 158

Query: 121 LGIIDDGAKIANAPNFLRESAQLWWRRKHAEWEKDRTILQTWEQFKAELRKHFVPHNADM 180
           LGI+DDGA +ANAP FL +S                           ELRKHFVP+NADM
Sbjct: 159 LGIVDDGANVANAPTFLPKSV--------------------------ELRKHFVPYNADM 218

Query: 181 EARGKLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDDLKDWAKIELDRRNVRT 240
           EAR KLRRLRQ G IP+YIKEFTTLML+ E LSDKDALFHFRDDLKDWAKIELDRRN++T
Sbjct: 219 EARSKLRRLRQTGGIPEYIKEFTTLMLKTEYLSDKDALFHFRDDLKDWAKIELDRRNIQT 278

Query: 241 LDDAIAAAGALIDIYSKEKKRRVDEGEAFEPKKEGNSKQDGKYGKAPFANKDTIPPTCFL 300
           LDDAIA    LI++  KEKK  +DEG+  E KK+GNSKQ GK GKA FANK T P  CFL
Sbjct: 279 LDDAIATVKLLINLSFKEKKTCIDEGDRSEAKKDGNSKQGGKNGKALFANKGTTPEPCFL 338

Query: 301 CKGPHWTRDCPKKNKLSAIVANPREEEEVPIKGTAQLGGIRYLSAMKSESSKEPQEGGLL 360
           C GPHW RDCPKKNKLSA+VANP +EEE P+KG+AQL  IRYLS M+++ SKEPQ GG L
Sbjct: 339 CNGPHWARDCPKKNKLSAMVANPYDEEEAPMKGSAQLSAIRYLSPMENDFSKEPQNGGWL 390

Query: 361 YVDATFNNKAALAMLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIG 416
           YVD   N+K AL +LD     NVMDPEEAK+LGLR TRRSDTEIKIISAK M+N G
Sbjct: 399 YVDTMLNSKVALTILDTCTIENVMDPEEAKQLGLRITRRSDTEIKIISAKPMRNTG 390

[Close]

BLAST of IVF0008740 vs. NCBI nr
Match: TYK18079.1 (uncharacterized protein E5676_scaffold306G004150 [Cucumis melo var. makuwa])

HSP 1 Score: 419 bits (1078), Expect = 2.44e-136
Identity = 229/472 (48.52%), Postives = 307/472 (65.04%), Query Frame = 0


Query: 1   MSGLMDELIQDNVEISNAAKEMIKVLGDSHGKEMYDILVEVTNLRKFVEEELHALRKN-- 60
           +S   +EL+Q+N EI++ AKEMI+ +G +  KE+ ++   VT L+ FVE ELH L     
Sbjct: 155 LSENFEELVQENAEITSVAKEMIEDMGRTFQKELKELASTVTTLKAFVEGELHDLHTKSI 214

Query: 61  -----VDEVRAEWHSRHASNGNASTSTSCTMVGTHNIKVPKPDTYNGTRNATMVENFLFG 120
                +D +  E HS+H  +   STST  T  GT NIKVPKPD YNG RNAT+V+NFLFG
Sbjct: 215 SFETRLDALCVECHSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVDNFLFG 274

Query: 121 LEQYYKALGIIDDGAKIANAPNFLRESAQLWWRRKHAEWEKDRTILQTWEQFKAELRKHF 180
           LE+Y+ ALG+ DD A+I +AP FLR+ AQLWWR K+A+  +    + +WEQFK ELRKHF
Sbjct: 275 LERYFVALGVRDDEARINHAPTFLRDVAQLWWRHKYAD--QSGNAIHSWEQFKTELRKHF 334

Query: 181 VPHNADMEARGKLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDDLKDWAKIEL 240
           VPHNA++E+RGKLR LR IGSI DY+KEFTTLMLEI DL +K+ALF F+D LKDWAKIEL
Sbjct: 335 VPHNAEIESRGKLRHLRHIGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIEL 394

Query: 241 DRRNVRTLDDAIAAAGALIDIYSKEKKRRV---------DEGEAFEPKKEGNSK----QD 300
           DRRNV+TLDDAIAAA  L+D  ++ K ++          D+ + F  K  G  K    ++
Sbjct: 395 DRRNVQTLDDAIAAAETLVDYSAQSKGKKPGPEKHGGKPDKTKNFGHKDGGKVKTFQWKN 454

Query: 301 GKYGKAPFANKDTIPPTCFLCKGPHWTRDCPKKNKLSAIVANPREEEEVPIKGTAQLGGI 360
           GK   A        P  CF+CKGPHWTRDCP +  L+A+VA  +E ++V      Q+G +
Sbjct: 455 GKNDGAHRGESSNPPKPCFICKGPHWTRDCPNRKALNALVAKFQEVKQVEDAPGPQIGSM 514

Query: 361 RYLSAMKSESSKEPQEGGLLYVDATFNNKAALAMLDAGATHNVMDPEEAKRLGLRTTRRS 420
           + +  MK E++ E +  GLLY +     K A  M D GA+HN MD +EAKRLGL+    +
Sbjct: 515 QQIGVMKKETTVEHK--GLLYGNIRIEGKEATTMFDTGASHNFMDVQEAKRLGLKFKEET 574

Query: 421 DTEIKIISAKSMKNIGWAQDVKTRVGGWQGKLNFLIAHLDDCKIILGLDFVD 452
              +K+++AK     G A+ V  ++G WQ +L+F +  +DD  I+LGL F D
Sbjct: 575 GI-VKVVNAKEQAIHGVAKGVLVKIGDWQKRLDFSVLPMDDFHIVLGLGFFD 621

[Close]

BLAST of IVF0008740 vs. NCBI nr
Match: KAA0042140.1 (uncharacterized protein E6C27_scaffold67G006290 [Cucumis melo var. makuwa])

HSP 1 Score: 419 bits (1078), Expect = 1.36e-135
Identity = 229/472 (48.52%), Postives = 307/472 (65.04%), Query Frame = 0


Query: 1   MSGLMDELIQDNVEISNAAKEMIKVLGDSHGKEMYDILVEVTNLRKFVEEELHALRKN-- 60
           +S   +EL+Q+N EI++ AKEMI+ +G +  KE+ ++   VT L+ FVE ELH L     
Sbjct: 218 LSENFEELVQENAEITSVAKEMIEDMGRTFQKELKELASTVTTLKAFVEGELHDLHTKSI 277

Query: 61  -----VDEVRAEWHSRHASNGNASTSTSCTMVGTHNIKVPKPDTYNGTRNATMVENFLFG 120
                +D +  E HS+H  +   STST  T  GT NIKVPKPD YNG RNAT+V+NFLFG
Sbjct: 278 SFETRLDALCVECHSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVDNFLFG 337

Query: 121 LEQYYKALGIIDDGAKIANAPNFLRESAQLWWRRKHAEWEKDRTILQTWEQFKAELRKHF 180
           LE+Y+ ALG+ DD A+I +AP FLR+ AQLWWR K+A+  +    + +WEQFK ELRKHF
Sbjct: 338 LERYFVALGVRDDEARINHAPTFLRDVAQLWWRHKYAD--QSGNAIHSWEQFKTELRKHF 397

Query: 181 VPHNADMEARGKLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDDLKDWAKIEL 240
           VPHNA++E+RGKLR LR IGSI DY+KEFTTLMLEI DL +K+ALF F+D LKDWAKIEL
Sbjct: 398 VPHNAEIESRGKLRHLRHIGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIEL 457

Query: 241 DRRNVRTLDDAIAAAGALIDIYSKEKKRRV---------DEGEAFEPKKEGNSK----QD 300
           DRRNV+TLDDAIAAA  L+D  ++ K ++          D+ + F  K  G  K    ++
Sbjct: 458 DRRNVQTLDDAIAAAETLVDYSAQSKGKKPGPEKHGGKPDKTKNFGHKDGGKVKTFQWKN 517

Query: 301 GKYGKAPFANKDTIPPTCFLCKGPHWTRDCPKKNKLSAIVANPREEEEVPIKGTAQLGGI 360
           GK   A        P  CF+CKGPHWTRDCP +  L+A+VA  +E ++V      Q+G +
Sbjct: 518 GKNDGAHRGESSNPPKPCFICKGPHWTRDCPNRKALNALVAKFQEVKQVEDAPGPQIGSM 577

Query: 361 RYLSAMKSESSKEPQEGGLLYVDATFNNKAALAMLDAGATHNVMDPEEAKRLGLRTTRRS 420
           + +  MK E++ E +  GLLY +     K A  M D GA+HN MD +EAKRLGL+    +
Sbjct: 578 QQIGVMKKETTVEHK--GLLYGNIRIEGKEATTMFDTGASHNFMDVQEAKRLGLKFKEET 637

Query: 421 DTEIKIISAKSMKNIGWAQDVKTRVGGWQGKLNFLIAHLDDCKIILGLDFVD 452
              +K+++AK     G A+ V  ++G WQ +L+F +  +DD  I+LGL F D
Sbjct: 638 GI-VKVVNAKEQAIHGVAKGVLVKIGDWQKRLDFSVLPMDDFHIVLGLGFFD 684

The following BLAST results are available for this feature:

BLAST of IVF0008740 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0008740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T2W8	5.1e-265	100.00	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7SY30	5.6e-203	92.54	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3BUR0	1.0e-132	62.26	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7VEX8	2.2e-114	48.52	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00510 PE=...	[more]
A0A5A7THC0	2.8e-114	48.31	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of IVF0008740 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035961.1	0.0	100.00	uncharacterized protein E6C27_scaffold56G001660 [Cucumis melo var. makuwa] >TYK3...	[more]
KAA0035960.1	1.23e-257	92.54	uncharacterized protein E6C27_scaffold56G001640 [Cucumis melo var. makuwa] >TYK3...	[more]
KAA0064169.1	9.14e-166	62.26	uncharacterized protein E6C27_scaffold548G00940 [Cucumis melo var. makuwa] >TYK0...	[more]
TYK18079.1	2.44e-136	48.52	uncharacterized protein E5676_scaffold306G004150 [Cucumis melo var. makuwa]	[more]
KAA0042140.1	1.36e-135	48.52	uncharacterized protein E6C27_scaffold67G006290 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0008740 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 38..65
None	No IPR available	PFAM	PF13975	gag-asp_proteas	coord: 362..451 e-value: 4.3E-8 score: 33.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 263..284
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 263..280
None	No IPR available	PANTHER	PTHR34482:SF18	RETROTRANSPOSON GAG DOMAIN, ASPARTIC PEPTIDASE DOMAIN PROTEIN-RELATED	coord: 46..286
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 46..286
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 362..450 e-value: 1.65281E-14 score: 66.9764
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 133..223 e-value: 1.3E-13 score: 51.0
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 341..456 e-value: 2.8E-18 score: 67.9
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 357..451

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0008740.1	IVF0008740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process