IVF0008663 (gene) Melon (IVF77) v1

Overview


Name	IVF0008663
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr06: 15021042 .. 15021285 (-)
RNA-Seq Expression	IVF0008663
Synteny	IVF0008663

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTTCATGGAGAATCGCGTTACCATTGCAGAAATGACTCGTGGGTTTCACCGCCACGGCTCGCCAGAAGTGACGGAGAGAAAGTGGGTTCGTGAGTAACACCTTGAACGTGAGGGTGTCTGCTCGTGTCAACGTGAATTCATAGGGGTCTTTGCCGTCTGAGGCTCGCCGGCCAAGAAGAATGAACAGAAAGGGGGTGGCCGGCCGCTGCAAGGGGAAGAAGAAGATTATGAAGGCTAG

mRNA sequence

ATGGAGCTTCATGGAGAATCGCGTTACCATTGCAGAAATGACTCGTGGGTTTCACCGCCACGGCTCGCCAGAAGTGACGGAGAGAAAGTGGGCTCGCCGGCCAAGAAGAATGAACAGAAAGGGGGTGGCCGGCCGCTGCAAGGGGAAGAAGAAGATTATGAAGGCTAG

Coding sequence (CDS)

ATGGAGCTTCATGGAGAATCGCGTTACCATTGCAGAAATGACTCGTGGGTTTCACCGCCACGGCTCGCCAGAAGTGACGGAGAGAAAGTGGGCTCGCCGGCCAAGAAGAATGAACAGAAAGGGGGTGGCCGGCCGCTGCAAGGGGAAGAAGAAGATTATGAAGGCTAG

Protein sequence

MELHGESRYHCRNDSWVSPPRLARSDGEKVGSPAKKNEQKGGGRPLQGEEEDYEG

Homology

[Close]

BLAST of IVF0008663 vs. ExPASy TrEMBL
Match: A0A0A0LDG1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G516500 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.5e-17
Identity = 49/56 (87.50%), Postives = 51/56 (91.07%), Query Frame = 0


Query: 1  MELHGESRYHCRNDSWVSPPRLARSDGEK-VGSPAKKNEQKGGGRPLQGEEEDYEG 56
          MEL+ ESRYHCRND WVSP RLARSDGEK V SPAKKNEQKGGGRP+QGEEEDYEG
Sbjct: 1  MELYRESRYHCRNDLWVSPTRLARSDGEKWVRSPAKKNEQKGGGRPMQGEEEDYEG 56

[Close]

BLAST of IVF0008663 vs. NCBI nr
Match: KGN58111.1 (hypothetical protein Csa_017429 [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 1.20e-25
Identity = 49/56 (87.50%), Postives = 51/56 (91.07%), Query Frame = 0


Query: 1  MELHGESRYHCRNDSWVSPPRLARSDGEK-VGSPAKKNEQKGGGRPLQGEEEDYEG 55
          MEL+ ESRYHCRND WVSP RLARSDGEK V SPAKKNEQKGGGRP+QGEEEDYEG
Sbjct: 1  MELYRESRYHCRNDLWVSPTRLARSDGEKWVRSPAKKNEQKGGGRPMQGEEEDYEG 56

The following BLAST results are available for this feature:

BLAST of IVF0008663 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0008663 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDG1	1.5e-17	87.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G516500 PE=4 SV=1	[more]

BLAST of IVF0008663 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN58111.1	1.20e-25	87.50	hypothetical protein Csa_017429 [Cucumis sativus]	[more]

BLAST of IVF0008663 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0008663.1	IVF0008663.1	mRNA