IVF0008654 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCAACGCCACCATTTCCCCTTTCCCTCTCTCTCTACAAACCACTTTTCCGATCCCCTCTCTCTACAATGGCCACCAATCTCCTCACTTTCACCCCCGCCGGCATCCGTGCCTGTGCCGCCTCCGCCGACCGCCGCTCCGACCTTAACCGTCGCAAAGCCTCATCCTCTACCAACTGGTGGGCCCCGGTCTTCGGCTGGTCCTCCGAACCCGACTATATTGACTCCGCCGCCAACAAGGCTGAACCTCAGAACCTTGCCGGCGCTGCTTCCAAACCAGATCTGGAGACGAAGTCCGTTAGGGGTCGATTTTCCCCTGGCTGCTTCACGGAAGCGAAGGCTCGACAGCTGCGAATGATGACGACGGAAACAGAGTCGTTTCACGACGTTATGTACCACTCGGCGATCGCATCTCGTCTGGCTTCCGACTTCAAAAGTCGTGGCGATTCTTGATTCCGCGGCCGTCGGTCCCTCTTATCTACTACTTTTGCAATTATGTATGTTGAATTTTGTATAAATTAATTGCAAATTCAGGGATTAAAGAGTTGTAAACTGTTCTTTTTTTTTTTTTTAAATTTTTTTTTTAAATTCTGATCTTCAATCATGAGGTTTTATTGAAGAAGCAAGAAGAAGAAGATGATGTTGGTGTAATATTAAATGTATTAAAATAACTTTTAATTTGGGGTTTAGGGGTAAATTATTTTAATTAAAAATTGGGGTCCAGCTGCCCACCATGACGTGACATTCTTAAATAACTGATTAATTTGTGGTTATGGGATGTAAGCACTGATCACCAATTTGATTAGGCTATAACAATTTGAGGGGTGCTAATTAACCTTATACTTCCCAATATAGAAGAAGAGTAAAAATAACCCAATGATATCTATAAACTAGAAAGGTAAATAATTTGTTATAATAATAACAAATCTAATAACCACTTTCTAATCGACTAACTAAACTTCACCTCTCAATCAA GCAACGCCACCATTTCCCCTTTCCCTCTCTCTCTACAAACCACTTTTCCGATCCCCTCTCTCTACAATGGCCACCAATCTCCTCACTTTCACCCCCGCCGGCATCCGTGCCTGTGCCGCCTCCGCCGACCGCCGCTCCGACCTTAACCGTCGCAAAGCCTCATCCTCTACCAACTGGTGGGCCCCGGTCTTCGGCTGGTCCTCCGAACCCGACTATATTGACTCCGCCGCCAACAAGGCTGAACCTCAGAACCTTGCCGGCGCTGCTTCCAAACCAGATCTGGAGACGAAGTCCGTTAGGGGTCGATTTTCCCCTGGCTGCTTCACGGAAGCGAAGGCTCGACAGCTGCGAATGATGACGACGGAAACAGAGTCGTTTCACGACGTTATGTACCACTCGGCGATCGCATCTCGTCTGGCTTCCGACTTCAAAAGTCGTGGCGATTCTTGATTCCGCGGCCGTCGGTCCCTCTTATCTACTACTTTTGCAATTATGTATGTTGAATTTTGTATAAATTAATTGCAAATTCAGGGATTAAAGAGTTGTAAACTGTTCTTTTTTTTTTTTTTAAATTTTTTTTTTAAATTCTGATCTTCAATCATGAGGTTTTATTGAAGAAGCAAGAAGAAGAAGATGATGTTGGTGTAATATTAAATGTATTAAAATAACTTTTAATTTGGGGTTTAGGGGTAAATTATTTTAATTAAAAATTGGGGTCCAGCTGCCCACCATGACGTGACATTCTTAAATAACTGATTAATTTGTGGTTATGGGATGTAAGCACTGATCACCAATTTGATTAGGCTATAACAATTTGAGGGGTGCTAATTAACCTTATACTTCCCAATATAGAAGAAGAGTAAAAATAACCCAATGATATCTATAAACTAGAAAGGTAAATAATTTGTTATAATAATAACAAATCTAATAACCACTTTCTAATCGACTAACTAAACTTCACCTCTCAATCAA ATGGCCACCAATCTCCTCACTTTCACCCCCGCCGGCATCCGTGCCTGTGCCGCCTCCGCCGACCGCCGCTCCGACCTTAACCGTCGCAAAGCCTCATCCTCTACCAACTGGTGGGCCCCGGTCTTCGGCTGGTCCTCCGAACCCGACTATATTGACTCCGCCGCCAACAAGGCTGAACCTCAGAACCTTGCCGGCGCTGCTTCCAAACCAGATCTGGAGACGAAGTCCGTTAGGGGTCGATTTTCCCCTGGCTGCTTCACGGAAGCGAAGGCTCGACAGCTGCGAATGATGACGACGGAAACAGAGTCGTTTCACGACGTTATGTACCACTCGGCGATCGCATCTCGTCTGGCTTCCGACTTCAAAAGTCGTGGCGATTCTTGA MATNLLTFTPAGIRACAASADRRSDLNRRKASSSTNWWAPVFGWSSEPDYIDSAANKAEPQNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASDFKSRGDS Homology
BLAST of IVF0008654 vs. ExPASy TrEMBL
Match: A0A5D3CSV6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15G00250 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 2.2e-64 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of IVF0008654 vs. ExPASy TrEMBL
Match: A0A1S4E4Y4 (uncharacterized protein LOC103502747 OS=Cucumis melo OX=3656 GN=LOC103502747 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 2.2e-64 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of IVF0008654 vs. ExPASy TrEMBL
Match: A0A0A0LTN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G303705 PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 1.3e-56 Identity = 115/127 (90.55%), Postives = 120/127 (94.49%), Query Frame = 0
BLAST of IVF0008654 vs. ExPASy TrEMBL
Match: A0A6J1HBD8 (uncharacterized protein LOC111461308 OS=Cucurbita moschata OX=3662 GN=LOC111461308 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 8.6e-45 Identity = 100/131 (76.34%), Postives = 107/131 (81.68%), Query Frame = 0
BLAST of IVF0008654 vs. ExPASy TrEMBL
Match: A0A6J1JBM9 (uncharacterized protein LOC111485309 OS=Cucurbita maxima OX=3661 GN=LOC111485309 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 5.6e-44 Identity = 98/128 (76.56%), Postives = 106/128 (82.81%), Query Frame = 0
BLAST of IVF0008654 vs. NCBI nr
Match: XP_016903293.1 (PREDICTED: uncharacterized protein LOC103502747 [Cucumis melo] >KAA0046733.1 uncharacterized protein E6C27_scaffold216G00140 [Cucumis melo var. makuwa] >TYK14510.1 uncharacterized protein E5676_scaffold15G00250 [Cucumis melo var. makuwa]) HSP 1 Score: 258 bits (659), Expect = 9.71e-87 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of IVF0008654 vs. NCBI nr
Match: XP_011656185.1 (uncharacterized protein LOC105435656 [Cucumis sativus] >KGN65295.1 hypothetical protein Csa_019984 [Cucumis sativus]) HSP 1 Score: 232 bits (592), Expect = 1.56e-76 Identity = 115/127 (90.55%), Postives = 120/127 (94.49%), Query Frame = 0
BLAST of IVF0008654 vs. NCBI nr
Match: XP_038880363.1 (uncharacterized protein LOC120072011 [Benincasa hispida]) HSP 1 Score: 227 bits (579), Expect = 1.50e-74 Identity = 114/127 (89.76%), Postives = 117/127 (92.13%), Query Frame = 0
BLAST of IVF0008654 vs. NCBI nr
Match: XP_022960569.1 (uncharacterized protein LOC111461308 [Cucurbita moschata]) HSP 1 Score: 192 bits (489), Expect = 7.87e-61 Identity = 100/131 (76.34%), Postives = 107/131 (81.68%), Query Frame = 0
BLAST of IVF0008654 vs. NCBI nr
Match: XP_023516733.1 (uncharacterized protein LOC111780539 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 190 bits (482), Expect = 8.07e-60 Identity = 97/127 (76.38%), Postives = 104/127 (81.89%), Query Frame = 0
BLAST of IVF0008654 vs. TAIR 10
Match: AT1G52720.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15630.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 93.6 bits (231), Expect = 1.2e-19 Identity = 54/116 (46.55%), Postives = 70/116 (60.34%), Query Frame = 0
BLAST of IVF0008654 vs. TAIR 10
Match: AT3G15630.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52720.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 90.9 bits (224), Expect = 8.0e-19 Identity = 55/116 (47.41%), Postives = 68/116 (58.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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