IVF0008558 (gene) Melon (IVF77) v1

Overview


Name	IVF0008558
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Ulp1-like peptidase
Location	chr04: 20075340 .. 20076324 (-)
RNA-Seq Expression	IVF0008558
Synteny	IVF0008558

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGGGTCGAAATTAGACAAAGAGTACCCAACCCTAAATTTTGAGAGCAACGAGGATGCCGTGAAGATGTCACTCTTCTATTTCGTTGAATTGGCCATGATGGCTAGGGAGGGAAGACAGTATATGGACTGGACCATGTTAGGCCTCTTAGATGACCTTGAGGACTTTGTGAGCTATGATTGGGGTGAGTTGATCTGGATCAAGGCCTTAGGTAGCTTGAAAGAGGCACTAAGGGGAAAGGTGACCATGCATAAGAAGAAGCCCCCAAATAAGTTCCCAGAGTCTTACAGCCTATATGGCTTCCCCTTTACCTTTCAGGTTAGTAACCCAATTCTAGCTTGTTAAGTTTTTTTAGTTATATGCTTTGTGATTATCGTTCTTTTGTTAATGTTATTCTTGCATATTTAAGTTTAGACGTACAAGTTAATGTTGTCCATAAGTAGGCAGGTGGCTAATAGGGCTTGGCGTGATGCGGTACCACGCATCATGCGATGGAGTTACACTTACTCACCTTGATTGAAGGTGATTGAGTCATAAGTCGTTAGGTCCCAAACAGTAAGTCCTGGGTTCTTTTGTTATTCCACTATCACATTTTGGTTTAGGGTTTAAAAACTAGTACTTGTTGGTTGATGTTTCAAATTCAGGCCCGTATACAAGCAATTGAGCCCATAGATGAGGAGCTTGTATACCTAGATCAGGTTCTTGATATCCCTTTTACGGAAGGTTATGAGGATAACCCCGATGCTCCTCTTCAAGATCACGATGCCCCCTTTCCCATCTCATGGCCAGTATGAAGATCACCCATCCATCCTTAGACCACTGTCAACCTCCACTACCCATCCATCCTTGTAAGGATAATTTCGATACACTACGAGAAATCGGGAGGTGCACAAATTGTCGTCGAAAGATGGAACATCAGGATAAACTGCTAATCCCAACACCGTATTACATACGTCGAAAAATGGCAAAAACATTATATTAA

mRNA sequence

ATGAATGGGTCGAAATTAGACAAAGAGTACCCAACCCTAAATTTTGAGAGCAACGAGGATGCCGTGAAGATGTCACTCTTCTATTTCGTTGAATTGGCCATGATGGCTAGGGAGGGAAGACAGTATATGGACTGGACCATGTTAGGCCTCTTAGATGACCTTGAGGACTTTGTGAGCTATGATTGGGGTGAGTTGATCTGGATCAAGGCCTTAGGTAGCTTGAAAGAGGCACTAAGGGGAAAGGTGACCATGCATAAGAAGAAGCCCCCAAATAAGTTCCCAGAGTCTTACAGCCTATATGGCTTCCCCTTTACCTTTCAGGCCCGTATACAAGCAATTGAGCCCATAGATGAGGAGCTTGTATACCTAGATCAGGTTCTTGATATCCCTTTTACGGAAGGTTATGAGGATAACCCCGATGCTCCTCTTCAAGATCACGATATCACCCATCCATCCTTAGACCACTGTCAACCTCCACTACCCATCCATCCTTGTAAGGATAATTTCGATACACTACGAGAAATCGGGAGGTGCACAAATTGTCGTCGAAAGATGGAACATCAGGATAAACTGCTAATCCCAACACCGTATTACATACGTCGAAAAATGGCAAAAACATTATATTAA

Coding sequence (CDS)

ATGAATGGGTCGAAATTAGACAAAGAGTACCCAACCCTAAATTTTGAGAGCAACGAGGATGCCGTGAAGATGTCACTCTTCTATTTCGTTGAATTGGCCATGATGGCTAGGGAGGGAAGACAGTATATGGACTGGACCATGTTAGGCCTCTTAGATGACCTTGAGGACTTTGTGAGCTATGATTGGGGTGAGTTGATCTGGATCAAGGCCTTAGGTAGCTTGAAAGAGGCACTAAGGGGAAAGGTGACCATGCATAAGAAGAAGCCCCCAAATAAGTTCCCAGAGTCTTACAGCCTATATGGCTTCCCCTTTACCTTTCAGGCCCGTATACAAGCAATTGAGCCCATAGATGAGGAGCTTGTATACCTAGATCAGGTTCTTGATATCCCTTTTACGGAAGGTTATGAGGATAACCCCGATGCTCCTCTTCAAGATCACGATATCACCCATCCATCCTTAGACCACTGTCAACCTCCACTACCCATCCATCCTTGTAAGGATAATTTCGATACACTACGAGAAATCGGGAGGTGCACAAATTGTCGTCGAAAGATGGAACATCAGGATAAACTGCTAATCCCAACACCGTATTACATACGTCGAAAAATGGCAAAAACATTATATTAA

Protein sequence

MNGSKLDKEYPTLNFESNEDAVKMSLFYFVELAMMAREGRQYMDWTMLGLLDDLEDFVSYDWGELIWIKALGSLKEALRGKVTMHKKKPPNKFPESYSLYGFPFTFQARIQAIEPIDEELVYLDQVLDIPFTEGYEDNPDAPLQDHDITHPSLDHCQPPLPIHPCKDNFDTLREIGRCTNCRRKMEHQDKLLIPTPYYIRRKMAKTLY

Homology

[Close]

BLAST of IVF0008558 vs. ExPASy TrEMBL
Match: A0A5D3DRB7 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00550 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.9e-94
Identity = 179/220 (81.36%), Postives = 181/220 (82.27%), Query Frame = 0


Query: 1   MNGSKLDKEYPTLNFESNEDAVKMSLFYFVELAMMAREGRQYMDWTMLGLLDDLEDFVSY 60
           MNGSKLDKEYPTLNFESNEDAVKMSLFYFVELAMMAREGRQYMDWTMLGLLDDLEDFVSY
Sbjct: 1   MNGSKLDKEYPTLNFESNEDAVKMSLFYFVELAMMAREGRQYMDWTMLGLLDDLEDFVSY 60

Query: 61  DWGELIWIKALGSLKEALRGKVTMHKKKPPNKFPESYSLYGFPFTFQ------------- 120
           DWGELIWIKALGSLKEALRGKVTMHKKKPPNKFPESYSLYGFPFTFQ             
Sbjct: 61  DWGELIWIKALGSLKEALRGKVTMHKKKPPNKFPESYSLYGFPFTFQTYKLMLSISRQVA 120

Query: 121 -------ARIQAIEPIDEELVYLDQVLDIPFTEGYEDNPDAPLQDHD-----------IT 180
                  ARIQAIEPIDEELVYLDQVLDIPFTEGYEDNPDAPLQDHD           IT
Sbjct: 121 NRAWRDAARIQAIEPIDEELVYLDQVLDIPFTEGYEDNPDAPLQDHDAPLSHLMASMKIT 180

Query: 181 HPSLDHCQPPLPIHPCKDNFDTLREIGRCTNCRRKMEHQD 190
           HPSLDHCQPPLPIHPCKDNFDTLREIGR  +    +  QD
Sbjct: 181 HPSLDHCQPPLPIHPCKDNFDTLREIGRLNSNINYVSKQD 220

[Close]

BLAST of IVF0008558 vs. ExPASy TrEMBL
Match: A0A5A7THV0 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00560 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.1e-28
Identity = 73/171 (42.69%), Postives = 104/171 (60.82%), Query Frame = 0


Query: 1   MNGSKLDKEYPTLNFESNEDAVKMSLFYFVELAMMAREGRQYMDWTMLGLLDDLEDFVSY 60
           MN S+  K+YPTL FE+++D  KM +FYF++LAMM+R+ RQ++DWTMLG+++DL+DF+SY
Sbjct: 18  MNESEFKKDYPTLQFENDKDGGKMLVFYFIKLAMMSRKRRQHIDWTMLGMINDLKDFISY 77

Query: 61  DWGELIWIKALGSLKEALRGKVTMHKKKPPNKFPESYSLY-GFPFTFQ-----------A 120
            W EL+  K   SLK AL GK    ++      P+++  +  FP  F             
Sbjct: 78  AWSELVLTKTFSSLKGALHGKWPCTRRNLQITIPQNHVAFTNFPSPFSLSLRDSIVHQWV 137

Query: 121 RIQAIEPIDEELVYLDQVLDIPFTEGYEDNPDAPLQDHDITHPSLDHCQPP 160
           RI  IEP+D+E  YLD+ L+IP  EGYE+    P     + HP L + Q P
Sbjct: 138 RIYDIEPMDDERAYLDRSLEIPMFEGYEEGLHDPSPPPHVQHP-LPYIQHP 187

[Close]

BLAST of IVF0008558 vs. ExPASy TrEMBL
Match: A0A5A7TTZ1 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G00600 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.7e-21
Identity = 52/66 (78.79%), Postives = 59/66 (89.39%), Query Frame = 0


Query: 1  MNGSKLDKEYPTLNFESNEDAVKMSLFYFVELAMMAREGRQYMDWTMLGLLDDLEDFVSY 60
          MNGSKLDK Y  LNFES+EDAVKM LF+F+ELAMM RE RQY+DWTMLGL+DDL+DFV+Y
Sbjct: 1  MNGSKLDKNYLILNFESDEDAVKMLLFFFIELAMMGRERRQYIDWTMLGLIDDLDDFVTY 60

Query: 61 DWGELI 67
          DW ELI
Sbjct: 61 DWDELI 66

[Close]

BLAST of IVF0008558 vs. ExPASy TrEMBL
Match: A0A0A0L7D5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G379230 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.7e-21
Identity = 52/66 (78.79%), Postives = 60/66 (90.91%), Query Frame = 0


Query: 1  MNGSKLDKEYPTLNFESNEDAVKMSLFYFVELAMMAREGRQYMDWTMLGLLDDLEDFVSY 60
          MNG +LDK+Y TL FES+ED VK+SLFYFVELAM+ RE RQ+MDWTMLG++DDLEDFVSY
Sbjct: 27 MNGLELDKDYLTLTFESDEDVVKISLFYFVELAMIGRERRQHMDWTMLGVIDDLEDFVSY 86

Query: 61 DWGELI 67
          DWGELI
Sbjct: 87 DWGELI 92

[Close]

BLAST of IVF0008558 vs. ExPASy TrEMBL
Match: A0A5D3D1I4 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003640 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 9.2e-20
Identity = 51/87 (58.62%), Postives = 64/87 (73.56%), Query Frame = 0


Query: 1  MNGSKLDKEYPTLNFESNEDAVKMSLFYFVELAMMAREGRQYMDWTMLGLLDDLEDFVSY 60
          MN     K    + F+S+EDA+K+SLF F+EL MM RE R++MDWTMLGL+DDLEDFVSY
Sbjct: 1  MNNQSWTKIIWNIQFKSDEDAMKISLFCFIELVMMERERRKHMDWTMLGLIDDLEDFVSY 60

Query: 61 DWGELIWIKALGSLKEALRGKVTMHKK 88
          DWG+LIW K  GSLK  L  KV  +++
Sbjct: 61 DWGKLIWAKTQGSLKWTLNRKVWAYER 87

[Close]

BLAST of IVF0008558 vs. NCBI nr
Match: KAA0068109.1 (Ulp1-like peptidase [Cucumis melo var. makuwa] >TYK26092.1 Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 355 bits (912), Expect = 5.21e-122
Identity = 179/220 (81.36%), Postives = 181/220 (82.27%), Query Frame = 0


Query: 1   MNGSKLDKEYPTLNFESNEDAVKMSLFYFVELAMMAREGRQYMDWTMLGLLDDLEDFVSY 60
           MNGSKLDKEYPTLNFESNEDAVKMSLFYFVELAMMAREGRQYMDWTMLGLLDDLEDFVSY
Sbjct: 1   MNGSKLDKEYPTLNFESNEDAVKMSLFYFVELAMMAREGRQYMDWTMLGLLDDLEDFVSY 60

Query: 61  DWGELIWIKALGSLKEALRGKVTMHKKKPPNKFPESYSLYGFPFTFQ------------- 120
           DWGELIWIKALGSLKEALRGKVTMHKKKPPNKFPESYSLYGFPFTFQ             
Sbjct: 61  DWGELIWIKALGSLKEALRGKVTMHKKKPPNKFPESYSLYGFPFTFQTYKLMLSISRQVA 120

Query: 121 -------ARIQAIEPIDEELVYLDQVLDIPFTEGYEDNPDAPLQDHD-----------IT 180
                  ARIQAIEPIDEELVYLDQVLDIPFTEGYEDNPDAPLQDHD           IT
Sbjct: 121 NRAWRDAARIQAIEPIDEELVYLDQVLDIPFTEGYEDNPDAPLQDHDAPLSHLMASMKIT 180

Query: 181 HPSLDHCQPPLPIHPCKDNFDTLREIGRCTNCRRKMEHQD 189
           HPSLDHCQPPLPIHPCKDNFDTLREIGR  +    +  QD
Sbjct: 181 HPSLDHCQPPLPIHPCKDNFDTLREIGRLNSNINYVSKQD 220

[Close]

BLAST of IVF0008558 vs. NCBI nr
Match: KAA0042982.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 138 bits (347), Expect = 3.80e-37
Identity = 77/178 (43.26%), Postives = 107/178 (60.11%), Query Frame = 0


Query: 1   MNGSKLDKEYPTLNFESNEDAVKMSLFYFVELAMMAREGRQYMDWTMLGLLDDLEDFVSY 60
           MN S+  K+YPTL FE+++D  KM +FYF++LAMM+R+ RQ++DWTMLG+++DL+DF+SY
Sbjct: 18  MNESEFKKDYPTLQFENDKDGGKMLVFYFIKLAMMSRKRRQHIDWTMLGMINDLKDFISY 77

Query: 61  DWGELIWIKALGSLKEALRGKVTMHKKKPPNKFPESYSLY-GFPFTFQ-----------A 120
            W EL+  K   SLK AL GK    ++      P+++  +  FP  F             
Sbjct: 78  AWSELVLTKTFSSLKGALHGKWPCTRRNLQITIPQNHVAFTNFPSPFSLSLRDSIVHQWV 137

Query: 121 RIQAIEPIDEELVYLDQVLDIPFTEGYEDNPDAPLQDHDITHPSLDHCQPPLPI--HP 164
           RI  IEP+D+E  YLD+ L+IP  EGYE+        HD + P   H Q PLP   HP
Sbjct: 138 RIYDIEPMDDERAYLDRSLEIPMFEGYEEGL------HDPSPPP--HVQHPLPYIQHP 187

[Close]

BLAST of IVF0008558 vs. NCBI nr
Match: KAA0046524.1 (Ulp1-like peptidase [Cucumis melo var. makuwa] >TYK28734.1 Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 113 bits (283), Expect = 4.60e-29
Identity = 52/66 (78.79%), Postives = 59/66 (89.39%), Query Frame = 0


Query: 1  MNGSKLDKEYPTLNFESNEDAVKMSLFYFVELAMMAREGRQYMDWTMLGLLDDLEDFVSY 60
          MNGSKLDK Y  LNFES+EDAVKM LF+F+ELAMM RE RQY+DWTMLGL+DDL+DFV+Y
Sbjct: 1  MNGSKLDKNYLILNFESDEDAVKMLLFFFIELAMMGRERRQYIDWTMLGLIDDLDDFVTY 60

Query: 61 DWGELI 66
          DW ELI
Sbjct: 61 DWDELI 66

[Close]

BLAST of IVF0008558 vs. NCBI nr
Match: KGN57895.1 (hypothetical protein Csa_010434 [Cucumis sativus])

HSP 1 Score: 113 bits (283), Expect = 9.56e-29
Identity = 52/66 (78.79%), Postives = 60/66 (90.91%), Query Frame = 0


Query: 1  MNGSKLDKEYPTLNFESNEDAVKMSLFYFVELAMMAREGRQYMDWTMLGLLDDLEDFVSY 60
          MNG +LDK+Y TL FES+ED VK+SLFYFVELAM+ RE RQ+MDWTMLG++DDLEDFVSY
Sbjct: 27 MNGLELDKDYLTLTFESDEDVVKISLFYFVELAMIGRERRQHMDWTMLGVIDDLEDFVSY 86

Query: 61 DWGELI 66
          DWGELI
Sbjct: 87 DWGELI 92

[Close]

BLAST of IVF0008558 vs. NCBI nr
Match: KAA0042171.1 (Ulp1-like peptidase [Cucumis melo var. makuwa] >TYK26746.1 Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 107 bits (267), Expect = 1.94e-26
Identity = 49/68 (72.06%), Postives = 58/68 (85.29%), Query Frame = 0


Query: 1  MNGSKLDKEYPTLNFESNEDAVKMSLFYFVELAMMAREGRQYMDWTMLGLLDDLEDFVSY 60
          M GS+LDKEY TLNFES+ED VKMSLFYF+EL MM RE RQ+MDWT+L L+DD+E+F+SY
Sbjct: 1  MKGSELDKEYQTLNFESDEDVVKMSLFYFIELVMMGREKRQHMDWTILSLIDDVENFMSY 60

Query: 61 DWGELIWI 68
          DWG  I I
Sbjct: 61 DWGLSIQI 68

The following BLAST results are available for this feature:

BLAST of IVF0008558 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0008558 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DRB7	1.9e-94	81.36	Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185...	[more]
A0A5A7THV0	1.1e-28	42.69	Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G0...	[more]
A0A5A7TTZ1	1.7e-21	78.79	Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G...	[more]
A0A0A0L7D5	1.7e-21	78.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G379230 PE=4 SV=1	[more]
A0A5D3D1I4	9.2e-20	58.62	Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G0...	[more]

BLAST of IVF0008558 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0068109.1	5.21e-122	81.36	Ulp1-like peptidase [Cucumis melo var. makuwa] >TYK26092.1 Ulp1-like peptidase [...	[more]
KAA0042982.1	3.80e-37	43.26	Ulp1-like peptidase [Cucumis melo var. makuwa]	[more]
KAA0046524.1	4.60e-29	78.79	Ulp1-like peptidase [Cucumis melo var. makuwa] >TYK28734.1 Ulp1-like peptidase [...	[more]
KGN57895.1	9.56e-29	78.79	hypothetical protein Csa_010434 [Cucumis sativus]	[more]
KAA0042171.1	1.94e-26	72.06	Ulp1-like peptidase [Cucumis melo var. makuwa] >TYK26746.1 Ulp1-like peptidase [...	[more]

BLAST of IVF0008558 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0008558.1	IVF0008558.1	mRNA