IVF0008520 (gene) Melon (IVF77) v1

Overview


Name	IVF0008520
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	B3 domain-containing protein
Location	chr03: 25618320 .. 25619081 (-)
RNA-Seq Expression	IVF0008520
Synteny	IVF0008520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCCAACAACCACGTCTTCAAGACTTTAGATCTTATCTCATTGTTCGCTCCTGATCGATCAACGGATGGAAGCTCTGAGAGTGATACGGGATCGCAGATATCGAGCGAGAAGAGTAAGAACTCTTCTGGGTCTGATGATCATAAGCCAAGGATGGAGACGCGACGACGAAAGGCGAGCGAGAAGAGGAAGAAGAACGACAATTCTCCTGGGTCTGATCATAGGCCGAAGAAGGAGAGGCGAAAAGACATGGTGTTTTCGAAGACGATTGAGATGTCGGCGATGTTGAGAGATAGGATTGATGAATTGGATGGCTTTGACATCCAATATGTGACTCAAAAGAGATTGCAAGACACTGACATGAACAAGAATCACGGTCGGTTACTGATTCCTTTTAAAAAACTAAGGAATGATTTTGCTTCAGAAGAGGAGAAGCAGCTGTTGAAACAACATGATCAAGAAGATTTGAAAAACAAGAATGGAATGACAGTGTTGATAATCGATCCTCAGTTAAGAAATAGACACATTGAGTTGAAAATGTGGAAGGTTGGGCAACACGATAGCTATTGTCTGATGTCAAAGTGGAATTCGTTTGTCCAAGAAAATTCACTGGAAAGTGGAGATTACATCCAACTTTGGAGTTTTAGATCAAACAATATTTTCATAGTTGGCCATCAAAGTCAAGTGCCCGTCAACTCCAATCTTTGCTTCGCTTTAGTTAAACTTGACATCTCGGAGGGAATTTTTAAGTTTATTTGA

mRNA sequence

ATGGAATCCAACAACCACGTCTTCAAGACTTTAGATCTTATCTCATTGTTCGCTCCTGATCGATCAACGGATGGAAGCTCTGAGAGTGATACGGGATCGCAGATATCGAGCGAGAAGAGTAAGAACTCTTCTGGGTCTGATGATCATAAGCCAAGGATGGAGACGCGACGACGAAAGGCGAGCGAGAAGAGGAAGAAGAACGACAATTCTCCTGGGTCTGATCATAGGCCGAAGAAGGAGAGGCGAAAAGACATGGTGTTTTCGAAGACGATTGAGATGTCGGCGATGTTGAGAGATAGGATTGATGAATTGGATGGCTTTGACATCCAATATGTGACTCAAAAGAGATTGCAAGACACTGACATGAACAAGAATCACGGTCGGTTACTGATTCCTTTTAAAAAACTAAGGAATGATTTTGCTTCAGAAGAGGAGAAGCAGCTGTTGAAACAACATGATCAAGAAGATTTGAAAAACAAGAATGGAATGACAGTGTTGATAATCGATCCTCAGTTAAGAAATAGACACATTGAGTTGAAAATGTGGAAGGTTGGGCAACACGATAGCTATTGTCTGATGTCAAAGTGGAATTCGTTTGTCCAAGAAAATTCACTGGAAAGTGGAGATTACATCCAACTTTGGAGTTTTAGATCAAACAATATTTTCATAGTTGGCCATCAAAGTCAAGTGCCCGTCAACTCCAATCTTTGCTTCGCTTTAGTTAAACTTGACATCTCGGAGGGAATTTTTAAGTTTATTTGA

Coding sequence (CDS)

ATGGAATCCAACAACCACGTCTTCAAGACTTTAGATCTTATCTCATTGTTCGCTCCTGATCGATCAACGGATGGAAGCTCTGAGAGTGATACGGGATCGCAGATATCGAGCGAGAAGAGTAAGAACTCTTCTGGGTCTGATGATCATAAGCCAAGGATGGAGACGCGACGACGAAAGGCGAGCGAGAAGAGGAAGAAGAACGACAATTCTCCTGGGTCTGATCATAGGCCGAAGAAGGAGAGGCGAAAAGACATGGTGTTTTCGAAGACGATTGAGATGTCGGCGATGTTGAGAGATAGGATTGATGAATTGGATGGCTTTGACATCCAATATGTGACTCAAAAGAGATTGCAAGACACTGACATGAACAAGAATCACGGTCGGTTACTGATTCCTTTTAAAAAACTAAGGAATGATTTTGCTTCAGAAGAGGAGAAGCAGCTGTTGAAACAACATGATCAAGAAGATTTGAAAAACAAGAATGGAATGACAGTGTTGATAATCGATCCTCAGTTAAGAAATAGACACATTGAGTTGAAAATGTGGAAGGTTGGGCAACACGATAGCTATTGTCTGATGTCAAAGTGGAATTCGTTTGTCCAAGAAAATTCACTGGAAAGTGGAGATTACATCCAACTTTGGAGTTTTAGATCAAACAATATTTTCATAGTTGGCCATCAAAGTCAAGTGCCCGTCAACTCCAATCTTTGCTTCGCTTTAGTTAAACTTGACATCTCGGAGGGAATTTTTAAGTTTATTTGA

Protein sequence

MESNNHVFKTLDLISLFAPDRSTDGSSESDTGSQISSEKSKNSSGSDDHKPRMETRRRKASEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDTDMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKNGMTVLIIDPQLRNRHIELKMWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFIVGHQSQVPVNSNLCFALVKLDISEGIFKFI

Homology

[Close]

BLAST of IVF0008520 vs. ExPASy Swiss-Prot
Match: Q9XIP5 (Putative B3 domain-containing protein At2g27410 OS=Arabidopsis thaliana OX=3702 GN=At2g27410 PE=3 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 2.0e-10
Identity = 41/149 (27.52%), Postives = 73/149 (48.99%), Query Frame = 0


Query: 103 ELDGFDIQYVTQKRLQDTDMNKNHGRLLIPFKKLRN-DFASEEEKQLLKQHDQEDLKNKN 162
           E +G++ + ++ ++L  TD+ K   RL +PFK+++  DF +E+E +++  H+       N
Sbjct: 80  EENGYNPKLISTRQLYKTDLKKTEARLSVPFKQVKTPDFLTEDETRII--HENAMKIRDN 139

Query: 163 GMTVLIIDPQLRNRHIELKMWKVGQHDSYCLMSKWNSFVQ--ENSLESGDYIQLWSFRSN 222
           G+ V  +DP+L    +EL+ WK+  +  Y  +  W + +   +   +  D   LWSFRS 
Sbjct: 140 GVPVNFVDPELNKHVLELRKWKMKGNWIYVFVKGWKNVLDACKTLFKEDDVYPLWSFRSG 199

Query: 223 NIFIVGHQSQVPVNSNLCFALVKLDISEG 249
                           LCFAL   +   G
Sbjct: 200 -------------TGKLCFALTPKNSGRG 213

[Close]

BLAST of IVF0008520 vs. ExPASy Swiss-Prot
Match: Q9LSF7 (B3 domain-containing protein At3g25182 OS=Arabidopsis thaliana OX=3702 GN=At3g25182 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.5e-10
Identity = 54/188 (28.72%), Postives = 93/188 (49.47%), Query Frame = 0


Query: 54  ETRRRKASEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSA--MLRDRIDELDGFDIQY 113
           + R+R+A E+RK+             ++ K   FS+T   +   ++    D  +  D + 
Sbjct: 165 KNRKRRAVEQRKRTGG---------VKKAKVAPFSQTARETPEWLVNVMRDMKEAKDAKL 224

Query: 114 VTQKRLQDTDMNKNHGRLLIPFKK-LRNDFASEEEKQLLKQHDQEDLKN--KNGMTVLII 173
           + +K L  TD+N    RL +PF   LRNDF +  E +++     +D+KN  K G+  +++
Sbjct: 225 IFEKTLFVTDVNPTQNRLSMPFNNLLRNDFLTSVESRII----DKDIKNDKKIGVGAILV 284

Query: 174 DPQLRNRHIELKMWKVGQHD-----SYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFI 232
           D + +   + LK W++ +       +Y L+  WN  V+ N L+ GD I LWSFRS  I  
Sbjct: 285 DQRCKKWGVMLKRWEMKKESGKGSWNYNLICGWNDIVEANGLKEGDNISLWSFRSCGILC 339

[Close]

BLAST of IVF0008520 vs. ExPASy Swiss-Prot
Match: Q9FLV7 (B3 domain-containing protein At5g24050 OS=Arabidopsis thaliana OX=3702 GN=At5g24050 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.5e-08
Identity = 51/171 (29.82%), Postives = 86/171 (50.29%), Query Frame = 0


Query: 55  TRRRKASEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQ 114
           +R+R+A E+RK++     ++  P  +  ++     T E    +   + E    D + + +
Sbjct: 169 SRKRRAVEQRKRSGGVKKANVAPFSQTARE-----TPEWLVKVMTNMKEAK--DAKLIFE 228

Query: 115 KRLQDTDMNKNHGRLLIPFKK-LRNDFASEEEKQLLKQHDQEDLKNKN--GMTVLIIDPQ 174
           K L  TD+N    RL +PF   LRNDF +  E  ++     ED+ N N  G+  +++D +
Sbjct: 229 KTLFVTDVNPTKNRLSMPFNNLLRNDFLTSVESIII----NEDINNNNKIGVGAILVDQR 288

Query: 175 LRNRHIELKMWKVGQHD-----SYCLMSKWNSFVQENSLESGDYIQLWSFR 218
            +   + LK W++ +       SY L+  WN  V+ N L+ GD I LWSFR
Sbjct: 289 CKKWGVMLKRWEMKKESGKGSWSYNLICGWNDIVEANRLKEGDNITLWSFR 328

[Close]

BLAST of IVF0008520 vs. ExPASy Swiss-Prot
Match: Q9FFX2 (B3 domain-containing protein At5g38490 OS=Arabidopsis thaliana OX=3702 GN=At5g38490 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.5e-08
Identity = 41/137 (29.93%), Postives = 72/137 (52.55%), Query Frame = 0


Query: 112 VTQKRLQDTDMNKNHGRLLIPFKKL-RNDFASEEE-KQLLKQHDQEDLKNKN-GMTVLII 171
           + ++ L  +D+N N  RLL+PF+KL RNDF +  E + + K  D ++  ++N G+  +++
Sbjct: 239 IFERTLFKSDVNSNLSRLLMPFQKLIRNDFLTPAECRAMQKDEDNDEEDDENIGVGTVLV 298

Query: 172 DPQLRNRHIELKMWKVGQHD-----SYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFI 231
           + + +   +  K+W + +       +Y L   WN  V+ +SL+ GD I LW+FR   +  
Sbjct: 299 NQRFQKWGLRFKIWAMEKDSGHGTLNYTLNWGWNDVVKSSSLKVGDKISLWTFRCRGV-- 358

Query: 232 VGHQSQVPVNSNLCFAL 241
                       LCFAL
Sbjct: 359 ------------LCFAL 361

[Close]

BLAST of IVF0008520 vs. ExPASy Swiss-Prot
Match: Q9LRX6 (Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana OX=3702 GN=At3g24850 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.7e-07
Identity = 48/175 (27.43%), Postives = 85/175 (48.57%), Query Frame = 0


Query: 55  TRRRKASEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQ 114
           +R+R+A E+RK+      +   P     +D           +++   D  +  D + + +
Sbjct: 179 SRKRRAVEERKRTGGFKKAKVAPFPGTARD-------TPKWLVKVMRDMKEAKDAKLIFE 238

Query: 115 KRLQDTDMNKNHGRLLIPFKK-LRNDFASEEEKQLLKQHDQEDLKN--KNGMTVLIIDPQ 174
           K L  TD+N    RL +PF   L+NDF +  E +++K    ED+ N  K G+  +++D +
Sbjct: 239 KTLFVTDINPTQNRLSMPFNNLLQNDFLTSVESRIIK----EDINNNKKIGVGAILVDQR 298

Query: 175 LRNRHIELKMWKVGQHD-----SYCLMSKWNSFVQENSLESGDYIQLWSFRSNNI 222
                + LK W++ +       +Y L+  WN  V+ N L+ GD I +WSFR   +
Sbjct: 299 SVKWGVMLKRWELKKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFRCRGV 342

[Close]

BLAST of IVF0008520 vs. ExPASy TrEMBL
Match: A0A5A7VHB3 (B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005760 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.1e-135
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MESNNHVFKTLDLISLFAPDRSTDGSSESDTGSQISSEKSKNSSGSDDHKPRMETRRRKA 60
           MESNNHVFKTLDLISLFAPDRSTDGSSESDTGSQISSEKSKNSSGSDDHKPRMETRRRKA
Sbjct: 1   MESNNHVFKTLDLISLFAPDRSTDGSSESDTGSQISSEKSKNSSGSDDHKPRMETRRRKA 60

Query: 61  SEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDT 120
           SEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDT
Sbjct: 61  SEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDT 120

Query: 121 DMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKNGMTVLIIDPQLRNRHIELK 180
           DMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKNGMTVLIIDPQLRNRHIELK
Sbjct: 121 DMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKNGMTVLIIDPQLRNRHIELK 180

Query: 181 MWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFIVGHQSQVPVNSNLCFAL 240
           MWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFIVGHQSQVPVNSNLCFAL
Sbjct: 181 MWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFIVGHQSQVPVNSNLCFAL 240

Query: 241 VKLDISEGIFKFI 254
           VKLDISEGIFKFI
Sbjct: 241 VKLDISEGIFKFI 253

[Close]

BLAST of IVF0008520 vs. ExPASy TrEMBL
Match: A0A1S3BCJ5 (B3 domain-containing protein At3g25182-like OS=Cucumis melo OX=3656 GN=LOC103488545 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.1e-135
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MESNNHVFKTLDLISLFAPDRSTDGSSESDTGSQISSEKSKNSSGSDDHKPRMETRRRKA 60
           MESNNHVFKTLDLISLFAPDRSTDGSSESDTGSQISSEKSKNSSGSDDHKPRMETRRRKA
Sbjct: 1   MESNNHVFKTLDLISLFAPDRSTDGSSESDTGSQISSEKSKNSSGSDDHKPRMETRRRKA 60

Query: 61  SEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDT 120
           SEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDT
Sbjct: 61  SEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDT 120

Query: 121 DMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKNGMTVLIIDPQLRNRHIELK 180
           DMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKNGMTVLIIDPQLRNRHIELK
Sbjct: 121 DMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKNGMTVLIIDPQLRNRHIELK 180

Query: 181 MWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFIVGHQSQVPVNSNLCFAL 240
           MWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFIVGHQSQVPVNSNLCFAL
Sbjct: 181 MWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFIVGHQSQVPVNSNLCFAL 240

Query: 241 VKLDISEGIFKFI 254
           VKLDISEGIFKFI
Sbjct: 241 VKLDISEGIFKFI 253

[Close]

BLAST of IVF0008520 vs. ExPASy TrEMBL
Match: A0A0A0LL20 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361650 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 4.5e-69
Identity = 166/260 (63.85%), Postives = 182/260 (70.00%), Query Frame = 0


Query: 1   MESNNHVFKTLDLISLFAPDRSTDGSS------ESDTGSQISSEKSKNSSGSDDHKPRME 60
           MES   VF+TLDLISLFA D +TDGSS      E+DT SQ+SSEK  N SGSDD  PR E
Sbjct: 1   MESKRDVFETLDLISLFASDPATDGSSSETQTPENDTESQLSSEKRNNPSGSDD-APRTE 60

Query: 61  TRRRKASEKRKKNDNSPGSD-HRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVT 120
           TR+RKA EK   N+NSPGS   RPKKERRKD+VFSKTIEM  MLRDRI+EL GF+IQ+ T
Sbjct: 61  TRKRKAREK-SNNNNSPGSSGRRPKKERRKDVVFSKTIEMPQMLRDRIEELGGFNIQFAT 120

Query: 121 QKRLQDTDMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKNGMTVLIIDPQLR 180
           QKRLQDTDMNKNHGRLLIPFKKL NDFASEEEK+LLKQHDQEDLKNKNGMTVLIIDPQ  
Sbjct: 121 QKRLQDTDMNKNHGRLLIPFKKLVNDFASEEEKRLLKQHDQEDLKNKNGMTVLIIDPQ-- 180

Query: 181 NRHIELKMWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFIVGHQSQVPVN 240
                                                       S+N FIVGH++Q+P+N
Sbjct: 181 --------------------------------------------SDNAFIVGHEAQLPIN 212

Query: 241 SNLCFALVKLDISEGIFKFI 254
           SNLCFA VKLDISEGIFKFI
Sbjct: 241 SNLCFAFVKLDISEGIFKFI 212

[Close]

BLAST of IVF0008520 vs. ExPASy TrEMBL
Match: A0A6J1HD06 (B3 domain-containing protein At1g05920-like OS=Cucurbita moschata OX=3662 GN=LOC111462959 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 3.9e-49
Identity = 113/195 (57.95%), Postives = 139/195 (71.28%), Query Frame = 0


Query: 61  SEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDT 120
           + KRK  D     D  P+++RR++MVFS T+EM A LR RI+ + G D+Q VTQK+LQ++
Sbjct: 21  TNKRKNRD----CDDEPRRKRRREMVFSSTVEMPAALRQRIEAMGGTDVQLVTQKQLQES 80

Query: 121 DMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKN-GMTVLIIDPQLRNRHIEL 180
           D NKNHGRLLIP KKL NDFA+EEE +L+ Q + +  + +  GM V IID  LR   I L
Sbjct: 81  DRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGMQVAIIDAALRESVIGL 140

Query: 181 KMWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRS-NNIFIVGHQSQVPVNSNLCF 240
           K+WK+G   +YCL S+WNSF ++NSLESGDYIQLWSFRS NN FIV   S       LCF
Sbjct: 141 KLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAFIVNDHS-------LCF 200

Query: 241 ALVKLDISEGIFKFI 254
           ALVKLDISEGIF FI
Sbjct: 201 ALVKLDISEGIFNFI 204

[Close]

BLAST of IVF0008520 vs. ExPASy TrEMBL
Match: A0A6J1CSV9 (B3 domain-containing protein At2g31420-like OS=Momordica charantia OX=3673 GN=LOC111013909 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.1e-48
Identity = 124/219 (56.62%), Postives = 145/219 (66.21%), Query Frame = 0


Query: 35  ISSEKSKNSSGSDDHKPRMETRRRKASEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMS 94
           I   K KN   S D+   ++T     S K  KND         KK ++ ++VFS TIEM 
Sbjct: 6   IGGRKRKN---SPDNDTEIDTDNNDMS-KVNKNDQ--------KKHKQLEVVFSSTIEMP 65

Query: 95  AMLRDRIDELDGFDIQYVTQKRLQDTDMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQ 154
           A LRDRI EL G+DIQ V QKRLQDTD+N+NHGRL IP KKL NDF +EEEKQLL Q D 
Sbjct: 66  AXLRDRIAELGGYDIQIVIQKRLQDTDLNRNHGRLSIPIKKLLNDFTTEEEKQLLDQQD- 125

Query: 155 EDLKNKNGMTVLIIDPQLRNRHIELKMWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLW 214
           E   NKNG+  LI+DP LR   I LK WK+G  + YCL+S+WNS  Q+NSLESGD+IQLW
Sbjct: 126 EHQNNKNGVXALILDPCLRESTIHLKKWKIGSREIYCLVSQWNSLAQKNSLESGDFIQLW 185

Query: 215 SFRSNNIFIVGHQSQVPVNSNLCFALVKLDISEGIFKFI 254
           SFR N        S  P   +LCFALVKLDISEGIF+FI
Sbjct: 186 SFRKN--------SGTP-TPHLCFALVKLDISEGIFRFI 202

[Close]

BLAST of IVF0008520 vs. NCBI nr
Match: XP_008445565.1 (PREDICTED: B3 domain-containing protein At3g25182-like [Cucumis melo] >KAA0065235.1 B3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 490 bits (1261), Expect = 2.27e-174
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MESNNHVFKTLDLISLFAPDRSTDGSSESDTGSQISSEKSKNSSGSDDHKPRMETRRRKA 60
           MESNNHVFKTLDLISLFAPDRSTDGSSESDTGSQISSEKSKNSSGSDDHKPRMETRRRKA
Sbjct: 1   MESNNHVFKTLDLISLFAPDRSTDGSSESDTGSQISSEKSKNSSGSDDHKPRMETRRRKA 60

Query: 61  SEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDT 120
           SEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDT
Sbjct: 61  SEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDT 120

Query: 121 DMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKNGMTVLIIDPQLRNRHIELK 180
           DMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKNGMTVLIIDPQLRNRHIELK
Sbjct: 121 DMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKNGMTVLIIDPQLRNRHIELK 180

Query: 181 MWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFIVGHQSQVPVNSNLCFAL 240
           MWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFIVGHQSQVPVNSNLCFAL
Sbjct: 181 MWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFIVGHQSQVPVNSNLCFAL 240

Query: 241 VKLDISEGIFKFI 253
           VKLDISEGIFKFI
Sbjct: 241 VKLDISEGIFKFI 253

[Close]

BLAST of IVF0008520 vs. NCBI nr
Match: XP_004152777.2 (putative B3 domain-containing protein At2g27410 [Cucumis sativus] >KAE8652107.1 hypothetical protein Csa_022429 [Cucumis sativus])

HSP 1 Score: 379 bits (974), Expect = 1.45e-130
Identity = 207/260 (79.62%), Postives = 225/260 (86.54%), Query Frame = 0


Query: 1   MESNNHVFKTLDLISLFAPDRSTDGSS------ESDTGSQISSEKSKNSSGSDDHKPRME 60
           MES   VF+TLDLISLFA D +TDGSS      E+DT SQ+SSEK  N SGSDD  PR E
Sbjct: 1   MESKRDVFETLDLISLFASDPATDGSSSETQTPENDTESQLSSEKRNNPSGSDDA-PRTE 60

Query: 61  TRRRKASEKRKKNDNSPGSD-HRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVT 120
           TR+RKA EK   N+NSPGS   RPKKERRKD+VFSKTIEM  MLRDRI+EL GF+IQ+ T
Sbjct: 61  TRKRKAREK-SNNNNSPGSSGRRPKKERRKDVVFSKTIEMPQMLRDRIEELGGFNIQFAT 120

Query: 121 QKRLQDTDMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKNGMTVLIIDPQLR 180
           QKRLQDTDMNKNHGRLLIPFKKL NDFASEEEK+LLKQHDQEDLKNKNGMTVLIIDPQLR
Sbjct: 121 QKRLQDTDMNKNHGRLLIPFKKLVNDFASEEEKRLLKQHDQEDLKNKNGMTVLIIDPQLR 180

Query: 181 NRHIELKMWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFIVGHQSQVPVN 240
           NR I LKMWKVGQH+SYCLMSKWN FV+ENSLESGDYIQLWSFRS+N FIVGH++Q+P+N
Sbjct: 181 NRQIGLKMWKVGQHESYCLMSKWNLFVKENSLESGDYIQLWSFRSDNAFIVGHEAQLPIN 240

Query: 241 SNLCFALVKLDISEGIFKFI 253
           SNLCFA VKLDISEGIFKFI
Sbjct: 241 SNLCFAFVKLDISEGIFKFI 258

[Close]

BLAST of IVF0008520 vs. NCBI nr
Match: XP_022144152.1 (B3 domain-containing protein At2g31420-like [Momordica charantia])

HSP 1 Score: 210 bits (535), Expect = 1.07e-64
Identity = 115/187 (61.50%), Postives = 135/187 (72.19%), Query Frame = 0


Query: 67  NDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDTDMNKNH 126
           ND S  + +  KK ++ ++VFS TIEM A LRDRI EL G+DIQ V QKRLQDTD+N+NH
Sbjct: 26  NDMSKVNKNDQKKHKQLEVVFSSTIEMPAXLRDRIAELGGYDIQIVIQKRLQDTDLNRNH 85

Query: 127 GRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKNGMTVLIIDPQLRNRHIELKMWKVGQ 186
           GRL IP KKL NDF +EEEKQLL Q D E   NKNG+  LI+DP LR   I LK WK+G 
Sbjct: 86  GRLSIPIKKLLNDFTTEEEKQLLDQQD-EHQNNKNGVXALILDPCLRESTIHLKKWKIGS 145

Query: 187 HDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFIVGHQSQVPVNSNLCFALVKLDIS 246
            + YCL+S+WNS  Q+NSLESGD+IQLWSFR N        S  P   +LCFALVKLDIS
Sbjct: 146 REIYCLVSQWNSLAQKNSLESGDFIQLWSFRKN--------SGTPT-PHLCFALVKLDIS 202

Query: 247 EGIFKFI 253
           EGIF+FI
Sbjct: 206 EGIFRFI 202

[Close]

BLAST of IVF0008520 vs. NCBI nr
Match: KAG6598443.1 (B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 208 bits (529), Expect = 8.66e-64
Identity = 110/181 (60.77%), Postives = 136/181 (75.14%), Query Frame = 0


Query: 74  DHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDTDMNKNHGRLLIPF 133
           D  P+++RR++MVFS T+EM A LR+RI+ + G D+Q VTQK+LQ++D NKNHGRLLIP 
Sbjct: 30  DDEPRRKRRREMVFSSTVEMPAALRERIEAMGGTDVQLVTQKQLQESDRNKNHGRLLIPT 89

Query: 134 KKLRNDFASEEEKQLLKQHDQEDLKNKNGMTVLIIDPQLRNRHIELKMWKVGQHDSYCLM 193
           KKL NDFA+EEE +L+ Q ++ D + + GM V IID  LR   I LK+WK+G   +YCL 
Sbjct: 90  KKLMNDFATEEEAELMMQ-EEVDRRRRIGMQVAIIDSALRESVIGLKLWKIGSGHNYCLA 149

Query: 194 SKWNSFVQENSLESGDYIQLWSFRSNN-IFIVGHQSQVPVNSNLCFALVKLDISEGIFKF 253
           S+WNSF ++NSLESGDYIQLWSFRSNN  FIV   S       LCFALVKLDISEGIF F
Sbjct: 150 SRWNSFAEQNSLESGDYIQLWSFRSNNNAFIVNDHS-------LCFALVKLDISEGIFNF 202

[Close]

BLAST of IVF0008520 vs. NCBI nr
Match: XP_023546349.1 (B3 domain-containing protein At1g05920-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 206 bits (524), Expect = 9.97e-63
Identity = 109/182 (59.89%), Postives = 135/182 (74.18%), Query Frame = 0


Query: 74  DHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDTDMNKNHGRLLIPF 133
           D  PK++RR++MVFS T+EM A LR+RI+ + G D+Q VTQK+LQ++D NKNHGRLLIP 
Sbjct: 50  DDEPKRKRRREMVFSSTVEMPAALRERIEAMGGTDVQLVTQKQLQESDRNKNHGRLLIPT 109

Query: 134 KKLRNDFASEEEKQLLKQHDQEDLKNKN-GMTVLIIDPQLRNRHIELKMWKVGQHDSYCL 193
           KKL NDFA+EEE +L+ Q + +  + +  GM V IID  LR   I LK+WK+G   +YCL
Sbjct: 110 KKLMNDFATEEEAELMMQEEVDRRRRRRIGMQVAIIDSALRETVIGLKLWKIGSGHNYCL 169

Query: 194 MSKWNSFVQENSLESGDYIQLWSFRSNN-IFIVGHQSQVPVNSNLCFALVKLDISEGIFK 253
            S+WNSF ++NSLESGDYIQLWSFRSNN  FIV   +       LCFALVKLDISEGIF 
Sbjct: 170 ASRWNSFAEQNSLESGDYIQLWSFRSNNNAFIVNDHT-------LCFALVKLDISEGIFN 224

[Close]

BLAST of IVF0008520 vs. TAIR 10
Match: AT2G27410.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-11
Identity = 41/149 (27.52%), Postives = 73/149 (48.99%), Query Frame = 0


Query: 103 ELDGFDIQYVTQKRLQDTDMNKNHGRLLIPFKKLRN-DFASEEEKQLLKQHDQEDLKNKN 162
           E +G++ + ++ ++L  TD+ K   RL +PFK+++  DF +E+E +++  H+       N
Sbjct: 80  EENGYNPKLISTRQLYKTDLKKTEARLSVPFKQVKTPDFLTEDETRII--HENAMKIRDN 139

Query: 163 GMTVLIIDPQLRNRHIELKMWKVGQHDSYCLMSKWNSFVQ--ENSLESGDYIQLWSFRSN 222
           G+ V  +DP+L    +EL+ WK+  +  Y  +  W + +   +   +  D   LWSFRS 
Sbjct: 140 GVPVNFVDPELNKHVLELRKWKMKGNWIYVFVKGWKNVLDACKTLFKEDDVYPLWSFRSG 199

Query: 223 NIFIVGHQSQVPVNSNLCFALVKLDISEG 249
                           LCFAL   +   G
Sbjct: 200 -------------TGKLCFALTPKNSGRG 213

[Close]

BLAST of IVF0008520 vs. TAIR 10
Match: AT5G38490.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 61.6 bits (148), Expect = 1.0e-09
Identity = 41/137 (29.93%), Postives = 72/137 (52.55%), Query Frame = 0


Query: 112 VTQKRLQDTDMNKNHGRLLIPFKKL-RNDFASEEE-KQLLKQHDQEDLKNKN-GMTVLII 171
           + ++ L  +D+N N  RLL+PF+KL RNDF +  E + + K  D ++  ++N G+  +++
Sbjct: 239 IFERTLFKSDVNSNLSRLLMPFQKLIRNDFLTPAECRAMQKDEDNDEEDDENIGVGTVLV 298

Query: 172 DPQLRNRHIELKMWKVGQHD-----SYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFI 231
           + + +   +  K+W + +       +Y L   WN  V+ +SL+ GD I LW+FR   +  
Sbjct: 299 NQRFQKWGLRFKIWAMEKDSGHGTLNYTLNWGWNDVVKSSSLKVGDKISLWTFRCRGV-- 358

Query: 232 VGHQSQVPVNSNLCFAL 241
                       LCFAL
Sbjct: 359 ------------LCFAL 361

[Close]

BLAST of IVF0008520 vs. TAIR 10
Match: AT5G24050.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 61.6 bits (148), Expect = 1.0e-09
Identity = 51/171 (29.82%), Postives = 86/171 (50.29%), Query Frame = 0


Query: 55  TRRRKASEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQ 114
           +R+R+A E+RK++     ++  P  +  ++     T E    +   + E    D + + +
Sbjct: 169 SRKRRAVEQRKRSGGVKKANVAPFSQTARE-----TPEWLVKVMTNMKEAK--DAKLIFE 228

Query: 115 KRLQDTDMNKNHGRLLIPFKK-LRNDFASEEEKQLLKQHDQEDLKNKN--GMTVLIIDPQ 174
           K L  TD+N    RL +PF   LRNDF +  E  ++     ED+ N N  G+  +++D +
Sbjct: 229 KTLFVTDVNPTKNRLSMPFNNLLRNDFLTSVESIII----NEDINNNNKIGVGAILVDQR 288

Query: 175 LRNRHIELKMWKVGQHD-----SYCLMSKWNSFVQENSLESGDYIQLWSFR 218
            +   + LK W++ +       SY L+  WN  V+ N L+ GD I LWSFR
Sbjct: 289 CKKWGVMLKRWEMKKESGKGSWSYNLICGWNDIVEANRLKEGDNITLWSFR 328

[Close]

BLAST of IVF0008520 vs. TAIR 10
Match: AT3G24850.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 56.6 bits (135), Expect = 3.3e-08
Identity = 48/175 (27.43%), Postives = 85/175 (48.57%), Query Frame = 0


Query: 55  TRRRKASEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQ 114
           +R+R+A E+RK+      +   P     +D           +++   D  +  D + + +
Sbjct: 179 SRKRRAVEERKRTGGFKKAKVAPFPGTARD-------TPKWLVKVMRDMKEAKDAKLIFE 238

Query: 115 KRLQDTDMNKNHGRLLIPFKK-LRNDFASEEEKQLLKQHDQEDLKN--KNGMTVLIIDPQ 174
           K L  TD+N    RL +PF   L+NDF +  E +++K    ED+ N  K G+  +++D +
Sbjct: 239 KTLFVTDINPTQNRLSMPFNNLLQNDFLTSVESRIIK----EDINNNKKIGVGAILVDQR 298

Query: 175 LRNRHIELKMWKVGQHD-----SYCLMSKWNSFVQENSLESGDYIQLWSFRSNNI 222
                + LK W++ +       +Y L+  WN  V+ N L+ GD I +WSFR   +
Sbjct: 299 SVKWGVMLKRWELKKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFRCRGV 342

[Close]

BLAST of IVF0008520 vs. TAIR 10
Match: AT1G05920.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 50.4 bits (119), Expect = 2.4e-06
Identity = 64/250 (25.60%), Postives = 111/250 (44.40%), Query Frame = 0


Query: 22  STDGSSESDTGSQISSEKSKNSSGSDDHKPRMETRRRKASEKRKKNDNSPGSDHRPKK-E 81
           S D  ++  T +Q+   K K +    DH PR  TR   A     +ND +P     PK   
Sbjct: 78  SRDNRTKPKTVAQVRDAKRKRTF---DHVPR-GTREPHA---YLRNDPAPQVASVPKSVP 137

Query: 82  RRKDMVFSKTI--------------------EMSAMLRDRIDELDGF-DIQYVTQKRLQD 141
             KD++  + +                    +    L   +  ++G  D + + +K L  
Sbjct: 138 EEKDVILDRILSNVPRRKKTTSYEFVPPKHPQEPQWLLQVMSRMNGAGDPKLIIEKNLDS 197

Query: 142 TDMNKNHGRLLIPFKK-LRNDFASEEEKQLLKQHDQEDLKNKN--GMTVLIIDPQLRNRH 201
            D++    RL IP    ++NDF + +E +L+   D++++ N+   G+   ++D + +  +
Sbjct: 198 NDVDPRQNRLSIPINTVIQNDFLTLDESRLI---DEDEITNEGNMGVAAFLVDQRTKKWN 257

Query: 202 IELKMWKV-----GQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFIVGHQSQVP 242
           +  K W +       + S+ L  +W++ V+ N L+ GD I LWSFRSN+I          
Sbjct: 258 MGFKQWFMTTDSGSSYWSFVLRGEWSNVVETNGLKEGDKISLWSFRSNDI---------- 303

The following BLAST results are available for this feature:

BLAST of IVF0008520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XIP5	2.0e-10	27.52	Putative B3 domain-containing protein At2g27410 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LSF7	3.5e-10	28.72	B3 domain-containing protein At3g25182 OS=Arabidopsis thaliana OX=3702 GN=At3g25...	[more]
Q9FLV7	1.5e-08	29.82	B3 domain-containing protein At5g24050 OS=Arabidopsis thaliana OX=3702 GN=At5g24...	[more]
Q9FFX2	1.5e-08	29.93	B3 domain-containing protein At5g38490 OS=Arabidopsis thaliana OX=3702 GN=At5g38...	[more]
Q9LRX6	4.7e-07	27.43	Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of IVF0008520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VHB3	2.1e-135	100.00	B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A1S3BCJ5	2.1e-135	100.00	B3 domain-containing protein At3g25182-like OS=Cucumis melo OX=3656 GN=LOC103488...	[more]
A0A0A0LL20	4.5e-69	63.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361650 PE=4 SV=1	[more]
A0A6J1HD06	3.9e-49	57.95	B3 domain-containing protein At1g05920-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1CSV9	1.1e-48	56.62	B3 domain-containing protein At2g31420-like OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of IVF0008520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445565.1	2.27e-174	100.00	PREDICTED: B3 domain-containing protein At3g25182-like [Cucumis melo] >KAA006523...	[more]
XP_004152777.2	1.45e-130	79.62	putative B3 domain-containing protein At2g27410 [Cucumis sativus] >KAE8652107.1 ...	[more]
XP_022144152.1	1.07e-64	61.50	B3 domain-containing protein At2g31420-like [Momordica charantia]	[more]
KAG6598443.1	8.66e-64	60.77	B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023546349.1	9.97e-63	59.89	B3 domain-containing protein At1g05920-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0008520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27410.1	1.4e-11	27.52	Domain of unknown function (DUF313)	[more]
AT5G38490.1	1.0e-09	29.93	Domain of unknown function (DUF313)	[more]
AT5G24050.1	1.0e-09	29.82	Domain of unknown function (DUF313)	[more]
AT3G24850.1	3.3e-08	27.43	Domain of unknown function (DUF313)	[more]
AT1G05920.1	2.4e-06	25.60	Domain of unknown function (DUF313)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005508	B3 domain-containing protein At2g31720-like	PFAM	PF03754	DUF313	coord: 94..201 e-value: 8.6E-19 score: 67.8
IPR005508	B3 domain-containing protein At2g31720-like	PANTHER	PTHR31541	B3 DOMAIN PLANT PROTEIN-RELATED	coord: 39..243
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 104..233 e-value: 1.6E-19 score: 71.8
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 113..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..87
None	No IPR available	PANTHER	PTHR31541:SF25	DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED	coord: 39..243
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 132..230 score: 8.754861
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 114..224 e-value: 8.35663E-7 score: 44.2409

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0008520.1	IVF0008520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding