IVF0008340 (gene) Melon (IVF77) v1

Overview


Name	IVF0008340
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ER membrane protein complex subunit 4
Location	chr07: 884103 .. 887453 (-)
RNA-Seq Expression	IVF0008340
Synteny	IVF0008340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCATACAAAAGTAAGGGTAAAAACAGTAATTATTTAAAACCATTCCCTTTTTAGTTTTGGTTTTGGAAATTAAAAAAGATATTAATCTGGTTGAAATTTCCGGACCATAAGCCTTCAAAAGGATCTGAATCTAAGCGTCTAAGTGAATCAACTCCGAACTCCACCATTGGAAAATCAGAAAACCCGTAATCTGAATGGAAAAGGGCAAGGGTTTGATGGTGGACGGCCGGCGATGGGCCGTCGATTTCTCCGACAATTCTTCGTCGAATTCAACTCGCGATATTCCTGATCCTCCTGGTTTTACTCGTGCTTCCCAAGATCAAGACGATTCCACTCTCAGCCGCCAGAAGAAGGATGCCGAATCCAATTGGAAGGCTCAGGTGCTACTCGAAATTCATTATTTTGGTCGATTAGGGTTTCTTTTGAGATTCTTCGTCCTTAATTTTTCACGCATCTCGTTGGGTTGTAGTTCTAGGGAAATTTAGAGCTTAGCAATAATTAATTATCTTTTTAGGGGACGAGTCGATGAGATTACTTAATAGTAGAAGCTTTGTTCTTCATTTTGTGTTGGGATTTTTTTTAAAAAAAATAAATATGGTCGACAAGAATTTTGTTGCCAAATGTAGTGATCTAACTTTGCAATATATGAGCAGAAAGCTTGGGAAGTGGCCCAGGCGCCGTTGAAGAATTTGTTCATGATGGGATTCATGATGTGGATGGCTGGAAGCACTGTTCATTTATTTAGCATTGGTATCACATTTTCAGCTCTTTGGCAGCCCATAAGCGCCCTGCAAGGCGTTGGAAAGGGTAGGATTGATATCCATTCTTTTGCTAACTTCATCTTTTTCTTTGTGTGTGTGTGTGTGTTTTGTTTAGCATGGTGTTGTCTTGTCTCTATCGTTCTGTCTACAAGCACATTTGACCTACAGTACACCATCTATTCGGTTTTCTTTTTCCACCTTCGTTTTTTACTATGTTTGTAGTCTCTGAACGATTCTTCGTTTTTTACTACTATGTTTGTAGTCTCTGAACGATTCTGCTTCCTCCGCCCCACTTGATACTATGTAAAGACGCTCGTTAGGAGCTTAATCATATTCCTTGATTTGTTTTTTTGGTGGTCTCTTGAGTTGGGTTGGACCTTTTTTTTATAGAGAAAGTAATACCCCCATTCTTCTTTGTTTTTAATGGTGTTTCTTATTGGAAGAAAAAAGAACTAGGGGTAGCTCAAGAACACAAACATATCTTGATCAAGTGAGGTTGTAACAAGGTAGTGTTTTTCAATAGCTTCCTTTTTTAGTGGATTTCTAGTAAGTAGAACTAAATACCGATTGTTCTGTTTGTAGAATGGCTATATAAGGTATAAAATTTTGAATTATGTAAGGAAAAATTATATTATTTGTGGGATATTAGTGATTTGATTTTAGTAGGTTTATCATATTGTTGGCTGTTGTTATTGGTATTTTTTTTTTCCTGCAGTTTTTGAGCCTTACAAGGACAGTAAAGTAGATCTTCTTGGACCTAAGTTGCTATTTATTGCCCTCAACCTCGGAGGTTTAGCATTAGGTGTTTGGAAGGTGAGTTTTCTAATATATTATTATTATTATTATTTTTAATCTCTTAATCTCTAAACAAGTTTTGAATGTCTCTTTTGTATTTTCTTACCACTGCTTAATTTTCCTACATCTCAAATGTGGCTTTTGCAGCTTAACACTTTGGGGCTTCTGCCAACACATGTATCAGACTGGGTTTCGTCTCTACCACCTGCTCAGGTCAGATTCTTACTCCTATGTTAATATGATTACTCCCTTTCATGGACATGTGCTGTTGTGCACCTTTTACCTGATTTTTGAAATGATATGCAAATTTGTTTTCTTGTTGCCAATGATTGAAATTGCTAAATACTATGGAAACTCATGGGCTCCATGTTTCGATAACTTGTGGTTCTACTTCTAAATACTGTCATGTTAATCAAATACAGTGTTAGGATGCAAGCTATATTGTTAATATTCAAGAAAAAATATTTTTCAATTGGTCCGGTTGATTGGATTTCTGGGCCATCTGTTTGGTGTATACTCTTTCAAGTAGAGTTGAATCGTTTCTAATGTGGACTGATTTTTTATTTTTAATGGTTGACTGGAGAAAGGTTAATTGTTTGTAGTTAGCTTGATTGCGCCCTGTTAATTAGTTAAGTTACTTGGATAGGATAAAATAGAAGGGGGAAGAATAAGGTATGAGAGAAGCAATGGGTTAATACAGTATCACCTCGACCAAAGGGTCAGAGGTTCAAACCTCACTTAAGGGCTGAGAGAAGTTGTGAGGAAAAAATTTGCTTTCTCATACCTCTCTATCCTTTGATTATGATAACTAACTATAGCTTTTAAATCCGGATTGAAGTCACTTAACATTTGATAGGATCTACAGGGTTAGTTTTATTTAAACATTGTTTCAATTGGATCGGAGATCTTCTCTATTGTCATTTATAGTTATTCTGATTGTTTATCAAATTTTAACATGCAATTAAATGCTCCCATCTCCTCGTAATCCCATTTTGGGGAAAAACTCACTGACGACATGTTTGGTAACGTTCTTTAATGGTTAAAATCACTTTTATTATTTTCAAAATTATTTTTGATAATCTAAATTCAAGTTTAAAAGATTGAAAAGTGTCGTTCATTTAAACACGACAAAAAATTCACTAGTCGATCTTGGCATTGAATTACAACGCATAAATTAGCGAAACATGGACCCCGTTGAGATGTGCTTGGTTAACAAAAAGAATAGTAACTTGTCGTGCCTATTCATTTATTAAACTTTTGGTCAGTGCTAGCACCTTGGAACTTATTCTTTATGATATTAGTCCTTCAATTCCCTGTACCATTGTTAAATATTTATCGTCTTTTTTCTCAGGAGGTTGAATTTTCCGGTGGTGGGATTTCTCTTCGCTAAGATGCACAACACCATTTTGTCTACTAACGACAGGGAAACCAACAGAGAATCATTGAGCCACTTGTTGATGATCGAACTTCATGGATGGATGGATGGATTGCTCGTGTTGTGCATGAACGTGATTATAAGTCTTTATATTACGCCTGCATGGATTGTGCTTGATCAAGAACAATGTTAGAGATGTGCTGAGGGCACAGCTATTGTTTATGGTACTCATTTTTCTTTAAAAATTAGATCCTGCTAGTAAAAATTATTACTGACTGGTAAACCATCCCATAGTATGCTAATTCCTTGCTCTGTATGCCCAAGAACAAAATGCTTTACATGGAATATGGTTTAACATTTTTTTTCTCTCTTTTGCATTATTTTTGAACAAATAAATCCTTGGAAAGTGATTGTAGTC

mRNA sequence

CTTCATACAAAAGTAAGGGTAAAAACAGTAATTATTTAAAACCATTCCCTTTTTAGTTTTGGTTTTGGAAATTAAAAAAGATATTAATCTGGTTGAAATTTCCGGACCATAAGCCTTCAAAAGGATCTGAATCTAAGCGTCTAAGTGAATCAACTCCGAACTCCACCATTGGAAAATCAGAAAACCCGTAATCTGAATGGAAAAGGGCAAGGGTTTGATGGTGGACGGCCGGCGATGGGCCGTCGATTTCTCCGACAATTCTTCGTCGAATTCAACTCGCGATATTCCTGATCCTCCTGGTTTTACTCGTGCTTCCCAAGATCAAGACGATTCCACTCTCAGCCGCCAGAAGAAGGATGCCGAATCCAATTGGAAGGCTCAGAAAGCTTGGGAAGTGGCCCAGGCGCCGTTGAAGAATTTGTTCATGATGGGATTCATGATGTGGATGGCTGGAAGCACTGTTCATTTATTTAGCATTGGTATCACATTTTCAGCTCTTTGGCAGCCCATAAGCGCCCTGCAAGGCGTTGGAAAGGTTTTTGAGCCTTACAAGGACAGTAAAGTAGATCTTCTTGGACCTAAGTTGCTATTTATTGCCCTCAACCTCGGAGGTTTAGCATTAGGTGTTTGGAAGCTTAACACTTTGGGGCTTCTGCCAACACATGTATCAGACTGGGTTTCGTCTCTACCACCTGCTCAGGAGGTTGAATTTTCCGGTGGTGGGATTTCTCTTCGCTAAGATGCACAACACCATTTTGTCTACTAACGACAGGGAAACCAACAGAGAATCATTGAGCCACTTGTTGATGATCGAACTTCATGGATGGATGGATGGATTGCTCGTGTTGTGCATGAACGTGATTATAAGTCTTTATATTACGCCTGCATGGATTGTGCTTGATCAAGAACAATGTTAGAGATGTGCTGAGGGCACAGCTATTGTTTATGGTACTCATTTTTCTTTAAAAATTAGATCCTGCTAGTAAAAATTATTACTGACTGGTAAACCATCCCATAGTATGCTAATTCCTTGCTCTGTATGCCCAAGAACAAAATGCTTTACATGGAATATGGTTTAACATTTTTTTTCTCTCTTTTGCATTATTTTTGAACAAATAAATCCTTGGAAAGTGATTGTAGTC

Coding sequence (CDS)

ATGGAAAAGGGCAAGGGTTTGATGGTGGACGGCCGGCGATGGGCCGTCGATTTCTCCGACAATTCTTCGTCGAATTCAACTCGCGATATTCCTGATCCTCCTGGTTTTACTCGTGCTTCCCAAGATCAAGACGATTCCACTCTCAGCCGCCAGAAGAAGGATGCCGAATCCAATTGGAAGGCTCAGAAAGCTTGGGAAGTGGCCCAGGCGCCGTTGAAGAATTTGTTCATGATGGGATTCATGATGTGGATGGCTGGAAGCACTGTTCATTTATTTAGCATTGGTATCACATTTTCAGCTCTTTGGCAGCCCATAAGCGCCCTGCAAGGCGTTGGAAAGGTTTTTGAGCCTTACAAGGACAGTAAAGTAGATCTTCTTGGACCTAAGTTGCTATTTATTGCCCTCAACCTCGGAGGTTTAGCATTAGGTGTTTGGAAGCTTAACACTTTGGGGCTTCTGCCAACACATGTATCAGACTGGGTTTCGTCTCTACCACCTGCTCAGGAGGTTGAATTTTCCGGTGGTGGGATTTCTCTTCGCTAA

Protein sequence

MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWKAQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR

Homology

[Close]

BLAST of IVF0008340 vs. ExPASy Swiss-Prot
Match: Q3T0K8 (ER membrane protein complex subunit 4 OS=Bos taurus OX=9913 GN=EMC4 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-19
Identity = 47/118 (39.83%), Postives = 74/118 (62.71%), Query Frame = 0


Query: 62  QKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDS 121
           ++ W++A  PLK + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + S
Sbjct: 67  KRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESS 126

Query: 122 KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISL 180
               L   L+++  NL GLAL V+K  ++GLLPTH SDW++ + P + +EFSGGG+ L
Sbjct: 127 SQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

[Close]

BLAST of IVF0008340 vs. ExPASy Swiss-Prot
Match: Q5J8M3 (ER membrane protein complex subunit 4 OS=Homo sapiens OX=9606 GN=EMC4 PE=1 SV=2)

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-19
Identity = 47/118 (39.83%), Postives = 74/118 (62.71%), Query Frame = 0


Query: 62  QKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDS 121
           ++ W++A  PLK + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + S
Sbjct: 67  KRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESS 126

Query: 122 KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISL 180
               L   L+++  NL GLAL V+K  ++GLLPTH SDW++ + P + +EFSGGG+ L
Sbjct: 127 SQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

[Close]

BLAST of IVF0008340 vs. ExPASy Swiss-Prot
Match: Q9CZX9 (ER membrane protein complex subunit 4 OS=Mus musculus OX=10090 GN=Emc4 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-19
Identity = 47/118 (39.83%), Postives = 74/118 (62.71%), Query Frame = 0


Query: 62  QKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDS 121
           ++ W++A  PLK + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + S
Sbjct: 67  KRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESS 126

Query: 122 KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISL 180
               L   L+++  NL GLAL V+K  ++GLLPTH SDW++ + P + +EFSGGG+ L
Sbjct: 127 SQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

[Close]

BLAST of IVF0008340 vs. ExPASy Swiss-Prot
Match: Q5RC35 (ER membrane protein complex subunit 4 OS=Pongo abelii OX=9601 GN=EMC4 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-19
Identity = 47/118 (39.83%), Postives = 74/118 (62.71%), Query Frame = 0


Query: 62  QKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDS 121
           ++ W++A  PLK + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + S
Sbjct: 67  KRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESS 126

Query: 122 KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISL 180
               L   L+++  NL GLAL V+K  ++GLLPTH SDW++ + P + +EFSGGG+ L
Sbjct: 127 SQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

[Close]

BLAST of IVF0008340 vs. ExPASy Swiss-Prot
Match: Q6P011 (ER membrane protein complex subunit 4 OS=Danio rerio OX=7955 GN=emc4 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.8e-19
Identity = 59/171 (34.50%), Postives = 94/171 (54.97%), Query Frame = 0


Query: 13  RWAVDFS-DNSSSNSTR-----DIPDPPGFTRASQDQDDSTLSRQKKDAESNWKAQKAWE 72
           +WAV+ S  NS S S R     D+  P G++      D        ++A+ N   ++ W+
Sbjct: 24  KWAVELSLGNSRSRSDRQGKDGDVMYPVGYS------DKPVPDTSVQEADRNLVEKRCWD 83

Query: 73  VAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLL 132
           VA  PLK + M  F+M+M+G+T+ +F I +     W+PI AL  +   F+  + S    L
Sbjct: 84  VALGPLKQIPMNLFIMYMSGNTISIFPIMMVCMMAWRPIQALMSMSATFKLLESSSQQWL 143

Query: 133 GPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGI 178
              L+++  NL G AL ++K  ++GLLPTH SDW++ + P Q +E  GGG+
Sbjct: 144 -QGLVYLIGNLLGSALAIYKCQSMGLLPTHSSDWLAFIEPPQRLEIMGGGM 187

[Close]

BLAST of IVF0008340 vs. ExPASy TrEMBL
Match: A0A1S3BUR2 (ER membrane protein complex subunit 4 OS=Cucumis melo OX=3656 GN=LOC103493734 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 6.2e-97
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR 180

[Close]

BLAST of IVF0008340 vs. ExPASy TrEMBL
Match: A0A0A0L0B6 (ER membrane protein complex subunit 4 OS=Cucumis sativus OX=3659 GN=Csa_4G651820 PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.0e-96
Identity = 178/180 (98.89%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVD RRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTH+SDWVSSLPPAQEVEFSGGGISLR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISLR 180

[Close]

BLAST of IVF0008340 vs. ExPASy TrEMBL
Match: A0A6J1FBZ1 (ER membrane protein complex subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111442661 PE=3 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 6.8e-96
Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVDGRRWAVDFSDNSSSNSTRDI DPPGFTRASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIVDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR 180

[Close]

BLAST of IVF0008340 vs. ExPASy TrEMBL
Match: A0A6J1IP31 (ER membrane protein complex subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111477281 PE=3 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 7.5e-95
Identity = 176/180 (97.78%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVDGRRWAVDFSDNSSSNSTRDI DPPGFTRASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIVDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAG TVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGRTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQ+VEFSGGG+SLR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQDVEFSGGGVSLR 180

[Close]

BLAST of IVF0008340 vs. ExPASy TrEMBL
Match: A0A6J1J3R8 (ER membrane protein complex subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111481007 PE=3 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 7.5e-95
Identity = 175/180 (97.22%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVDGRRWAVDF+DNSSSNSTRDIPDPPGF RASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFTDNSSSNSTRDIPDPPGFNRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTH+SDWVSSLPPAQEVEFSGGG  LR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPLR 180

[Close]

BLAST of IVF0008340 vs. NCBI nr
Match: XP_008452824.1 (PREDICTED: ER membrane protein complex subunit 4 [Cucumis melo])

HSP 1 Score: 361 bits (926), Expect = 1.01e-125
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR 180

[Close]

BLAST of IVF0008340 vs. NCBI nr
Match: XP_004145491.1 (ER membrane protein complex subunit 4 [Cucumis sativus] >KGN55415.1 hypothetical protein Csa_012491 [Cucumis sativus])

HSP 1 Score: 358 bits (919), Expect = 1.17e-124
Identity = 178/180 (98.89%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVD RRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTH+SDWVSSLPPAQEVEFSGGGISLR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISLR 180

[Close]

BLAST of IVF0008340 vs. NCBI nr
Match: XP_022935895.1 (ER membrane protein complex subunit 4-like [Cucurbita moschata] >XP_023535009.1 ER membrane protein complex subunit 4-like [Cucurbita pepo subsp. pepo] >KAG6591518.1 ER membrane protein complex subunit 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024405.1 ER membrane protein complex subunit 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 357 bits (917), Expect = 2.37e-124
Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVDGRRWAVDFSDNSSSNSTRDI DPPGFTRASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIVDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR 180

[Close]

BLAST of IVF0008340 vs. NCBI nr
Match: XP_022941437.1 (ER membrane protein complex subunit 4-like [Cucurbita moschata] >XP_022982038.1 ER membrane protein complex subunit 4-like [Cucurbita maxima] >XP_023524401.1 ER membrane protein complex subunit 4-like [Cucurbita pepo subsp. pepo] >KAG7037662.1 ER membrane protein complex subunit 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 354 bits (908), Expect = 5.59e-123
Identity = 175/180 (97.22%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVDGRRWAVDF+DNSSSNSTRDIPDPPGF RASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFTDNSSSNSTRDIPDPPGFNRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTH+SDWVSSLPPAQEVEFSGGG  LR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPLR 180

[Close]

BLAST of IVF0008340 vs. NCBI nr
Match: XP_022977118.1 (ER membrane protein complex subunit 4-like [Cucurbita maxima])

HSP 1 Score: 354 bits (908), Expect = 5.59e-123
Identity = 176/180 (97.78%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVDGRRWAVDFSDNSSSNSTRDI DPPGFTRASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIVDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAG TVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGRTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQ+VEFSGGG+SLR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQDVEFSGGGVSLR 180

[Close]

BLAST of IVF0008340 vs. TAIR 10
Match: AT5G10780.1 (CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transmembrane protein 85 (InterPro:IPR016687), Protein of unknown function DUF1077 (InterPro:IPR009445); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 292.7 bits (748), Expect = 2.0e-79
Identity = 142/176 (80.68%), Postives = 158/176 (89.77%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           M+KGK +M  GRRWAV+FSD S+  S+RDI DPPGF+RASQ+QDDS  SRQKKDAE+ WK
Sbjct: 1   MDKGKAVMGTGRRWAVEFSDQSTVPSSRDILDPPGFSRASQEQDDSANSRQKKDAEATWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
            QKAWEVAQ+P KNL MMGFMMWMAG+TVHLFSIGITFSALWQPISALQ VGK+FEP+KD
Sbjct: 61  LQKAWEVAQSPFKNLMMMGFMMWMAGNTVHLFSIGITFSALWQPISALQSVGKIFEPFKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGG 177
           +KV+LL PKL+F+ALNLGGLALGVWKLNTLGLLPTH SDWVSSLPP QEVE SGGG
Sbjct: 121 NKVELLMPKLVFLALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPPQEVEHSGGG 176

[Close]

BLAST of IVF0008340 vs. TAIR 10
Match: AT5G10780.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transmembrane protein 85 (InterPro:IPR016687), Protein of unknown function DUF1077 (InterPro:IPR009445); Has 395 Blast hits to 395 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 122; Plants - 51; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). )

HSP 1 Score: 279.3 bits (713), Expect = 2.2e-75
Identity = 135/168 (80.36%), Postives = 151/168 (89.88%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           M+KGK +M  GRRWAV+FSD S+  S+RDI DPPGF+RASQ+QDDS  SRQKKDAE+ WK
Sbjct: 1   MDKGKAVMGTGRRWAVEFSDQSTVPSSRDILDPPGFSRASQEQDDSANSRQKKDAEATWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
            QKAWEVAQ+P KNL MMGFMMWMAG+TVHLFSIGITFSALWQPISALQ VGK+FEP+KD
Sbjct: 61  LQKAWEVAQSPFKNLMMMGFMMWMAGNTVHLFSIGITFSALWQPISALQSVGKIFEPFKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQ 169
           +KV+LL PKL+F+ALNLGGLALGVWKLNTLGLLPTH SDWVSSLPP Q
Sbjct: 121 NKVELLMPKLVFLALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPPQ 168

The following BLAST results are available for this feature:

BLAST of IVF0008340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3T0K8	1.3e-19	39.83	ER membrane protein complex subunit 4 OS=Bos taurus OX=9913 GN=EMC4 PE=2 SV=1	[more]
Q5J8M3	1.3e-19	39.83	ER membrane protein complex subunit 4 OS=Homo sapiens OX=9606 GN=EMC4 PE=1 SV=2	[more]
Q9CZX9	1.3e-19	39.83	ER membrane protein complex subunit 4 OS=Mus musculus OX=10090 GN=Emc4 PE=1 SV=1	[more]
Q5RC35	1.3e-19	39.83	ER membrane protein complex subunit 4 OS=Pongo abelii OX=9601 GN=EMC4 PE=2 SV=1	[more]
Q6P011	3.8e-19	34.50	ER membrane protein complex subunit 4 OS=Danio rerio OX=7955 GN=emc4 PE=2 SV=1	[more]

BLAST of IVF0008340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BUR2	6.2e-97	100.00	ER membrane protein complex subunit 4 OS=Cucumis melo OX=3656 GN=LOC103493734 PE...	[more]
A0A0A0L0B6	4.0e-96	98.89	ER membrane protein complex subunit 4 OS=Cucumis sativus OX=3659 GN=Csa_4G651820...	[more]
A0A6J1FBZ1	6.8e-96	99.44	ER membrane protein complex subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111442...	[more]
A0A6J1IP31	7.5e-95	97.78	ER membrane protein complex subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC11147728...	[more]
A0A6J1J3R8	7.5e-95	97.22	ER membrane protein complex subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC11148100...	[more]

BLAST of IVF0008340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452824.1	1.01e-125	100.00	PREDICTED: ER membrane protein complex subunit 4 [Cucumis melo]	[more]
XP_004145491.1	1.17e-124	98.89	ER membrane protein complex subunit 4 [Cucumis sativus] >KGN55415.1 hypothetical...	[more]
XP_022935895.1	2.37e-124	99.44	ER membrane protein complex subunit 4-like [Cucurbita moschata] >XP_023535009.1 ...	[more]
XP_022941437.1	5.59e-123	97.22	ER membrane protein complex subunit 4-like [Cucurbita moschata] >XP_022982038.1 ...	[more]
XP_022977118.1	5.59e-123	97.78	ER membrane protein complex subunit 4-like [Cucurbita maxima]	[more]

BLAST of IVF0008340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10780.1	2.0e-79	80.68	CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transme...	[more]
AT5G10780.2	2.2e-75	80.36	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009445	TMEM85/ER membrane protein complex subunit 4	PIRSF	PIRSF017207	UCP017207_Tmem85	coord: 1..178 e-value: 2.0E-53 score: 178.4
IPR009445	TMEM85/ER membrane protein complex subunit 4	PFAM	PF06417	DUF1077	coord: 52..164 e-value: 1.7E-38 score: 131.3
IPR009445	TMEM85/ER membrane protein complex subunit 4	PANTHER	PTHR19315	ER MEMBRANE PROTEIN COMPLEX SUBUNIT 4	coord: 8..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..31

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0008340.2	IVF0008340.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0072546	EMC complex