IVF0008337 (gene) Melon (IVF77) v1

Overview
NameIVF0008337
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSerine/threonine-protein phosphatase 7 long form-like protein
Locationchr03: 17416656 .. 17416952 (-)
RNA-Seq ExpressionIVF0008337
SyntenyIVF0008337
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTATGAAGACTTTGTTGAGGACTATTATAAAATATCAACTTACGCTGCATGCTATGCGCCTCAGTTTCAACCTGTACCGCATGAAGATTATTGGATCACACCTACAAGTATGCCTGTCTTACTGCCAGATCTATCGTTGTTGAGAAAATCAAGTAGACCAAAGACTTCACGTTATCACAACGAGATGGATTGGACAGAACAAAGTGCTCAACAACGATGCTCATTCTGTAGCCAACTTGGTCATAACCGATGGAGCTGTACTTTGTTAAGGAGACAGGCACCTGATAGTTAG

mRNA sequence

ATGAACTATGAAGACTTTGTTGAGGACTATTATAAAATATCAACTTACGCTGCATGCTATGCGCCTCAGTTTCAACCTGTACCGCATGAAGATTATTGGATCACACCTACAAGTATGCCTGTCTTACTGCCAGATCTATCGTTGTTGAGAAAATCAAGTAGACCAAAGACTTCACGTTATCACAACGAGATGGATTGGACAGAACAAAGTGCTCAACAACGATGCTCATTCTGTAGCCAACTTGGTCATAACCGATGGAGCTGTACTTTGTTAAGGAGACAGGCACCTGATAGTTAG

Coding sequence (CDS)

ATGAACTATGAAGACTTTGTTGAGGACTATTATAAAATATCAACTTACGCTGCATGCTATGCGCCTCAGTTTCAACCTGTACCGCATGAAGATTATTGGATCACACCTACAAGTATGCCTGTCTTACTGCCAGATCTATCGTTGTTGAGAAAATCAAGTAGACCAAAGACTTCACGTTATCACAACGAGATGGATTGGACAGAACAAAGTGCTCAACAACGATGCTCATTCTGTAGCCAACTTGGTCATAACCGATGGAGCTGTACTTTGTTAAGGAGACAGGCACCTGATAGTTAG

Protein sequence

MNYEDFVEDYYKISTYAACYAPQFQPVPHEDYWITPTSMPVLLPDLSLLRKSSRPKTSRYHNEMDWTEQSAQQRCSFCSQLGHNRWSCTLLRRQAPDS
Homology
[Close]
BLAST of IVF0008337 vs. ExPASy TrEMBL
Match: A0A5D3BJ66 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4012G00010 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 3.4e-49
Identity = 95/98 (96.94%), Postives = 95/98 (96.94%), Query Frame = 0 

Query: 1  MNYEDFVEDYYKISTYAACYAPQFQPVPHEDYWITPTSMPVLLPDLSLLRKSSRPKTSRY 60
          MNYEDFVEDYYKISTYAACYAPQFQPVPHEDYWITPTSMPVLLPD SLLRKS RPKTSRY
Sbjct: 1  MNYEDFVEDYYKISTYAACYAPQFQPVPHEDYWITPTSMPVLLPDPSLLRKSGRPKTSRY 60

Query: 61 HNEMDWTEQSAQQRCSFCSQLGHNRWSCTLLRRQAPDS 99
          HNEMDWTEQSAQQRCSFCSQLGHNR SCTLLRRQAPDS
Sbjct: 61 HNEMDWTEQSAQQRCSFCSQLGHNRRSCTLLRRQAPDS 98

[Close]
BLAST of IVF0008337 vs. ExPASy TrEMBL
Match: A0A5A7T1X8 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G00510 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.9e-48
Identity = 94/98 (95.92%), Postives = 94/98 (95.92%), Query Frame = 0 

Query: 1   MNYEDFVEDYYKISTYAACYAPQFQPVPHEDYWITPTSMPVLLPDLSLLRKSSRPKTSRY 60
           MNYEDFVEDYYKISTYAACYA QFQPVPHEDYWITPTSMPVLLPD SLLRKS RPKTSRY
Sbjct: 543 MNYEDFVEDYYKISTYAACYASQFQPVPHEDYWITPTSMPVLLPDPSLLRKSGRPKTSRY 602

Query: 61  HNEMDWTEQSAQQRCSFCSQLGHNRWSCTLLRRQAPDS 99
           HNEMDWTEQSAQQRCSFCSQLGHNR SCTLLRRQAPDS
Sbjct: 603 HNEMDWTEQSAQQRCSFCSQLGHNRRSCTLLRRQAPDS 640

[Close]
BLAST of IVF0008337 vs. ExPASy TrEMBL
Match: A0A5D3D607 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00150 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.4e-47
Identity = 93/98 (94.90%), Postives = 93/98 (94.90%), Query Frame = 0 

Query: 1  MNYEDFVEDYYKISTYAACYAPQFQPVPHEDYWITPTSMPVLLPDLSLLRKSSRPKTSRY 60
          MNYEDFVEDYYKISTY ACYAPQFQPVPHEDYWITPTSMPVLLPD SLLRKS RPKTSRY
Sbjct: 1  MNYEDFVEDYYKISTYVACYAPQFQPVPHEDYWITPTSMPVLLPDPSLLRKSGRPKTSRY 60

Query: 61 HNEMDWTEQSAQQRCSFCSQLGHNRWSCTLLRRQAPDS 99
          HNEMDWTEQSAQQRCSF SQLGHNR SCTLLRRQAPDS
Sbjct: 61 HNEMDWTEQSAQQRCSFSSQLGHNRRSCTLLRRQAPDS 98

[Close]
BLAST of IVF0008337 vs. ExPASy TrEMBL
Match: A0A5D3BR89 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00280 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 9.3e-47
Identity = 90/98 (91.84%), Postives = 91/98 (92.86%), Query Frame = 0 

Query: 1   MNYEDFVEDYYKISTYAACYAPQFQPVPHEDYWITPTSMPVLLPDLSLLRKSSRPKTSRY 60
           MNYEDFVEDYYKI TY ACYAPQFQPVPHEDYWITPTSMPVLL D SLLRKS R K+SRY
Sbjct: 330 MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY 389

Query: 61  HNEMDWTEQSAQQRCSFCSQLGHNRWSCTLLRRQAPDS 99
           HNEMDWTEQSAQQRCSFCSQLGHNRW CTLLRRQAPDS
Sbjct: 390 HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS 427

[Close]
BLAST of IVF0008337 vs. ExPASy TrEMBL
Match: A0A5A7TD93 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold744G00780 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 9.3e-47
Identity = 90/98 (91.84%), Postives = 91/98 (92.86%), Query Frame = 0 

Query: 1   MNYEDFVEDYYKISTYAACYAPQFQPVPHEDYWITPTSMPVLLPDLSLLRKSSRPKTSRY 60
           MNYEDFVEDYYKI TY ACYAPQFQPVPHEDYWITPTSMPVLL D SLLRKS R K+SRY
Sbjct: 418 MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY 477

Query: 61  HNEMDWTEQSAQQRCSFCSQLGHNRWSCTLLRRQAPDS 99
           HNEMDWTEQSAQQRCSFCSQLGHNRW CTLLRRQAPDS
Sbjct: 478 HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS 515

[Close]
BLAST of IVF0008337 vs. NCBI nr
Match: TYJ98405.1 (uncharacterized protein E5676_scaffold4012G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 202 bits (515), Expect = 1.06e-65
Identity = 95/98 (96.94%), Postives = 95/98 (96.94%), Query Frame = 0 

Query: 1  MNYEDFVEDYYKISTYAACYAPQFQPVPHEDYWITPTSMPVLLPDLSLLRKSSRPKTSRY 60
          MNYEDFVEDYYKISTYAACYAPQFQPVPHEDYWITPTSMPVLLPD SLLRKS RPKTSRY
Sbjct: 1  MNYEDFVEDYYKISTYAACYAPQFQPVPHEDYWITPTSMPVLLPDPSLLRKSGRPKTSRY 60

Query: 61 HNEMDWTEQSAQQRCSFCSQLGHNRWSCTLLRRQAPDS 98
          HNEMDWTEQSAQQRCSFCSQLGHNR SCTLLRRQAPDS
Sbjct: 61 HNEMDWTEQSAQQRCSFCSQLGHNRRSCTLLRRQAPDS 98

[Close]
BLAST of IVF0008337 vs. NCBI nr
Match: TYK18933.1 (uncharacterized protein E5676_scaffold418G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 197 bits (501), Expect = 1.45e-63
Identity = 93/98 (94.90%), Postives = 93/98 (94.90%), Query Frame = 0 

Query: 1  MNYEDFVEDYYKISTYAACYAPQFQPVPHEDYWITPTSMPVLLPDLSLLRKSSRPKTSRY 60
          MNYEDFVEDYYKISTY ACYAPQFQPVPHEDYWITPTSMPVLLPD SLLRKS RPKTSRY
Sbjct: 1  MNYEDFVEDYYKISTYVACYAPQFQPVPHEDYWITPTSMPVLLPDPSLLRKSGRPKTSRY 60

Query: 61 HNEMDWTEQSAQQRCSFCSQLGHNRWSCTLLRRQAPDS 98
          HNEMDWTEQSAQQRCSF SQLGHNR SCTLLRRQAPDS
Sbjct: 61 HNEMDWTEQSAQQRCSFSSQLGHNRRSCTLLRRQAPDS 98

[Close]
BLAST of IVF0008337 vs. NCBI nr
Match: KAA0036768.1 (uncharacterized protein E6C27_scaffold20G00510 [Cucumis melo var. makuwa])

HSP 1 Score: 199 bits (507), Expect = 1.97e-58
Identity = 94/98 (95.92%), Postives = 94/98 (95.92%), Query Frame = 0 

Query: 1   MNYEDFVEDYYKISTYAACYAPQFQPVPHEDYWITPTSMPVLLPDLSLLRKSSRPKTSRY 60
           MNYEDFVEDYYKISTYAACYA QFQPVPHEDYWITPTSMPVLLPD SLLRKS RPKTSRY
Sbjct: 543 MNYEDFVEDYYKISTYAACYASQFQPVPHEDYWITPTSMPVLLPDPSLLRKSGRPKTSRY 602

Query: 61  HNEMDWTEQSAQQRCSFCSQLGHNRWSCTLLRRQAPDS 98
           HNEMDWTEQSAQQRCSFCSQLGHNR SCTLLRRQAPDS
Sbjct: 603 HNEMDWTEQSAQQRCSFCSQLGHNRRSCTLLRRQAPDS 640

[Close]
BLAST of IVF0008337 vs. NCBI nr
Match: TYK01705.1 (uncharacterized protein E5676_scaffold775G00280 [Cucumis melo var. makuwa])

HSP 1 Score: 194 bits (494), Expect = 2.57e-58
Identity = 90/98 (91.84%), Postives = 91/98 (92.86%), Query Frame = 0 

Query: 1   MNYEDFVEDYYKISTYAACYAPQFQPVPHEDYWITPTSMPVLLPDLSLLRKSSRPKTSRY 60
           MNYEDFVEDYYKI TY ACYAPQFQPVPHEDYWITPTSMPVLL D SLLRKS R K+SRY
Sbjct: 330 MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY 389

Query: 61  HNEMDWTEQSAQQRCSFCSQLGHNRWSCTLLRRQAPDS 98
           HNEMDWTEQSAQQRCSFCSQLGHNRW CTLLRRQAPDS
Sbjct: 390 HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS 427

[Close]
BLAST of IVF0008337 vs. NCBI nr
Match: XP_008457265.1 (PREDICTED: uncharacterized protein LOC103496991 [Cucumis melo])

HSP 1 Score: 194 bits (494), Expect = 4.58e-58
Identity = 90/98 (91.84%), Postives = 91/98 (92.86%), Query Frame = 0 

Query: 1   MNYEDFVEDYYKISTYAACYAPQFQPVPHEDYWITPTSMPVLLPDLSLLRKSSRPKTSRY 60
           MNYEDFVEDYYKI TY ACYAPQFQPVPHEDYWITPTSMPVLL D SLLRKS R K+SRY
Sbjct: 355 MNYEDFVEDYYKILTYVACYAPQFQPVPHEDYWITPTSMPVLLSDPSLLRKSGRSKSSRY 414

Query: 61  HNEMDWTEQSAQQRCSFCSQLGHNRWSCTLLRRQAPDS 98
           HNEMDWTEQSAQQRCSFCSQLGHNRW CTLLRRQAPDS
Sbjct: 415 HNEMDWTEQSAQQRCSFCSQLGHNRWRCTLLRRQAPDS 452

The following BLAST results are available for this feature:
BLAST of IVF0008337 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0008337 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BJ663.4e-4996.94Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7T1X82.9e-4895.92SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A5D3D6071.4e-4794.90Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BR899.3e-4791.84SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5A7TD939.3e-4791.84SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
BLAST of IVF0008337 vs. NCBI nr
Match NameE-valueIdentityDescription
TYJ98405.11.06e-6596.94uncharacterized protein E5676_scaffold4012G00010 [Cucumis melo var. makuwa][more]
TYK18933.11.45e-6394.90uncharacterized protein E5676_scaffold418G00150 [Cucumis melo var. makuwa][more]
KAA0036768.11.97e-5895.92uncharacterized protein E6C27_scaffold20G00510 [Cucumis melo var. makuwa][more]
TYK01705.12.57e-5891.84uncharacterized protein E5676_scaffold775G00280 [Cucumis melo var. makuwa][more]
XP_008457265.14.58e-5891.84PREDICTED: uncharacterized protein LOC103496991 [Cucumis melo][more]
BLAST of IVF0008337 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0008337.1IVF0008337.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010073 meristem maintenance
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding