IVF0008324 (gene) Melon (IVF77) v1

Overview
NameIVF0008324
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionchaperonin-like RbcX protein 2, chloroplastic
Locationchr02: 5243715 .. 5248224 (+)
RNA-Seq ExpressionIVF0008324
SyntenyIVF0008324
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTTAATTCATATTAATGTCGATCGAACTAATTCATATTAATATCGATTGAACTAAACTCTTATCAATTTACGAGGAGCTTTTAAACTTTCTATTACCATTATCTATGGTTGAATACCGTCCACACATAGTAAAGCATATTGACCATGAGGGAGCTTGAATTCCAACCTCGAATGGTTAGAAAACCCACCAAATTCAAGAAACCGTCCAGATGAATTCAAGTATGAAATCCAAAATATCTAATATTGAAGCTTTATTTGGGGAAAAATGGAAAAGATTTTCAAAAGCTTTTTTGAGCTGGAGAATTTTGGACCTCACCAAATTCTCTGGTCAAGATTCATCCAACTTCAAATCCCCCACAGCTCCCCACTTTCCTCCTTTCCCTCACACAATTCCCAAACATAACAATCTAAGAGCTCTAATCTTGAGCTATCTCACATACCCATTTCAAATCTCTGGCGGAAAATCGTTGAAGGGGTTTCCTTTTCGTTTCTCAAATCGACTCACAGGCGAGGGGGGGTCGATTTTGATTAGCGTATTTCCTCTGGTTTTATCTTTCTAAAAGGATGGTGGGAGCTTTATCTATGGTGGGTTCTTCAGTAGTGGATTCTCATACTTCCCCCTGTTTGTGTTTGGATGCTTTGCCCACAACCAGCATCAATCTCAAAAGTTGTGGGGATTTTGTAATGAAAAAGAAATATTCAATGGGTCGACAGCGTTTGCCGAAACCCAAGCACTTGGATCTAAGCAGCTCGTTTGTCGATAATGGCCTGGAGTGGCTGCTCTCGGTTGATATGATAAATAGGAGTTCAAGGAAGCAGACCAAGAATAGAAGACTTGTGGTTGTTGATGAACTTGGGGGGCAGTATGAAGATAACTTTGATGATGTTAAAATGGTAAGAATGTGAATTTGGAATTGTTATTCATCTGTATGCTTAAGACTGAATTTAGATTGGTATTTAAGCACGTTTTGGTAGTTTCTTGTGTTGCTGAAATGTATGTTACTGAATTTGGATAAGAAATCCCATGTAGCTTAATGAACGGTTTAACGGTTTAAGTCTAATCCAAAAGTGCTTTGACTGTGTGCTGTGGTTCTAGCTTTGTGTAGTGTTTGGAGCTATTTTCATTTTGATAAGACATGATTTTGGGTACTTTGGAGATTATAGTTCTTGGAAGGCTTCCTTTTAGACAACTTTACTTGAACAAATCTGTATCCTTGAGGTTATACAACTGTATCCTTGAGTTCTAAGGAAGGCTTCCTTTTGGTTTTGCAATGATTTGGTTACAATTCATCTACGGTATGCAGTCTTAGGAATTCACATTTCTTTCTAGTACCTTGATTCTTTTACTACGTTGATAAACATCTATGATATAGGACAACGCTACCATAATTGTTGTAATGAGGTGATTCAGATGCAGATGGGGTTCTCAGCATAGGAAAATTGTGAAAATCCTTTCTTCCAAATGATCAAGCGAAGGTTTGACTGAGAGCTGAGAAAGTTGGCCTTTCTACTAATACTTTAAAGGCATGCTAGACTCTAGACTAACAGCACTAGCACGTGTTCTCTTGCTTGCTAGTGCTTTCGAAGATTGGAGGGCATTCGTTATCGACTTTAGTAAGCTAGCTAGAAATAACTTCTTGGATGCTGTGGACTTGGTTGACCGTAACAAATGGTATTAGAGCCAAAATTTCGGTTACACCATGGTTAAGAGGAGTTTCTGTCTTATGTAATATTGGGGAATGTACTAACACATAAATACAACATAAAGAAGTAATACAAAATAAAAAATTGTAAATTGCAAAAGATTGTCCCACACTTATACTTCCACATAATCGCTATACTAAAGGACCTATTACTAGAATAGCTTTCAATACACAAATTACAATTTTGACTGCTGAACGACCAATTTCCAAGGTAAGGAATAGGAATAGAAGCACGTTGGTCAATACAGCAATACTCACAATTGTTACTTAAGTCGACTCACGGAGGCTATTTAAAGCCACCAGTGATATACACATGCAATACAAAAACCAACAGGTTGATGCAAGAGGCAACTGGAAGTGTTATTTTTATGCTTATGAGATATGCTTGAGATTTTAATTTTTCATTAAGTTTGTTATAGTCAGGTCCTGCATTTTCAAATTATTGGTTGATACTTCTTTTTAGTTTGATTTTAGTGACTTTCCAGTTTCTTGAGCTTTATCTTCTCCCATCCTTTGCTAATTCATTTGCCTACGAATTAATTAGTGAATTGACTGAAATTTCTCTGGCCCAGCAAATGCTTAATTATTTTACATACAAAGCTGTGAGGACTGTTATGAACCAGCTGTATGAAATGAACCCCCCACAGTACAGGTGGCTTTACGAGTACGTGCTATCTTTTGTTGCACTCTGAGACTTGCTTTTTTAATTAATTTATTTATTTTATTTTTTCTGTGTTACAGCATAACTGGAGTCAGTTTACTATGTTGGTTTCGATATAGACGCATGAAATAGTTGCAGTATTTTATATCATGCAAAATCAAGTTTGGCTGTCAAATTATTTCTTGTTAGAATGGACTTGGTCTTAAATTTTGATTCATATGTTTTCTTACTCACAGTTTCGTGTTAAACAACAAGCCAACAGACGGAAAGCATTTCATCCGAAGGCTTGTGAAGGTACTTCTAAAAATTATTACCTACCTTCATGACTTGGATACTTTTTCTGTGACAAACAAGTAACCGTCATTTCATTAATGAGAGGAAATTACAAAAAGGTTCGAGTGATCATTAGAATCACAAAAAAATTGCCAATGAATGGAAAGAGAAGTTAGGCGTGTTAGTAAAAGAGTTTAAATCTTTAGCTTTTTCCTTGAAGATGCAGACGGTTTTTCTTGAGCGATAATAACCAAAGGATGGCTTCATTGTGAGAGATCCGTAAACCTCTTTACTAATGTATGACTTGGAAACTAATTGGTTGTACGGAGAAGCAAAGCTTATCTAATCGATGCTTCGCATATGTTTTTCGCTATCGATTTTAGGGCCTGTTATATTTTGGAGTGATAGTTGATTAAAGGCATGCTTTAGAATGATTTTAAGTGCAGTAATAGTGATTTTAACCATTTCCAAATCACTCACAAACATATCATTAGACTCTTACTATAACTTGTTCCCAAAGTTCTTATGCTTGCTTGCCTTTTTAGGCCTACCGTAGCACAAAGATGTTACAAAATATGATACGTTTCAATATGATTGTTAAATTGTGTACACTATGCTTTAACTTCTAGTTTAGTCTACAAGTTTCATTATAGTCTATTTATTGATTAAACCTGCTACTAAGTAATATTAAATGCACCATGTACATAAACATTCTCTAACAAGTGAAAAAACAATTGTTCTAAGTGTGTATAAAGCTCCATAATTTGCTGACAAATTTGAAGTAGGAAAAAGAGCTAAATTCAAAGATTTGTTTCTAGGATGGAGGTTTAGTATGTGAAAAATGAATATACATATTAGAGTGAGAAAAAACTGTGGACCTCAAGATTGCATGCCAAGTTACACGAAGGCCTGTGCCTAATTGAGGCCATTTTGCTTGACAATAAGTCAGCTTAAATACACAACTAAAATATTTTCTTTTACTTCAGAATCCCAAATATTTCAGTTTAAAGTTAGAGCATCAAGGTTTAAGGTCATTTACGGTGCGGTAGATGTGGAATGGTTGACCACACCCACCAAACTTGTGTTTACCACTATTGACAAGAATTGAACGCATGTATTGTAACAAAATCATTATAGTTGTGTATTTAAGCTTGACACAAGGTTAGCTTAAATACACTGCTAAAATGGTTTCTTTTACTTGTGGATTCCGAACATTCCAGCTCTAAAATAGCGTTTTACTGCACCTGAATCATTGTTTTCCTAATTGACAGGAACAGCAAGATCTTGCTGAAAGAGTAATGATCACACGTCTCCACCTCTATGGAAAATGGGTGAAGGTATTGTTATCATTGTCGTATTCCTTTCCTTTCAATACAATATGTTCTTCTAATTATAGGAAGACCAGTATTTATATAAATGGAAACAAAAGCATGCAAAAATTTATTTCTTCTGTGGTGTAGAAATGTAACCATGCGGAAATATACCAAGAGATCTCGGACGAAAATGTGGAATTAATGCGAGAACGACTTATGCAGACTGTTATATGGCCTTCAGATGACACAAATACAGAGAAGATTGGCTAAAGAAAGTATCGAGTCATTTTGAGTTCTCTCCCTTGACATTCTTATTGTATTGCATCCTTCAATCGTAATTAGTTTGATTGTCGAGTTGCCGATCTTATTCTCACCGGTCAAGAAGTAGAAGATCAGTGCTGCAGTCTTTTTTTTTTTCTCCTTTGGTTGAAGATATGTATGTAATCAATCATTATATAATGTAAGATGTACATACATTTAGCATCCATTTTAGTTATTGTGAAGGTATAATGTAGAGCTGGGATTTCATCTGTGCTTCTATTTATTCATATGCATATTG

mRNA sequence

TGTTAATTCATATTAATGTCGATCGAACTAATTCATATTAATATCGATTGAACTAAACTCTTATCAATTTACGAGGAGCTTTTAAACTTTCTATTACCATTATCTATGGTTGAATACCGTCCACACATAGTAAAGCATATTGACCATGAGGGAGCTTGAATTCCAACCTCGAATGGTTAGAAAACCCACCAAATTCAAGAAACCGTCCAGATGAATTCAAGTATGAAATCCAAAATATCTAATATTGAAGCTTTATTTGGGGAAAAATGGAAAAGATTTTCAAAAGCTTTTTTGAGCTGGAGAATTTTGGACCTCACCAAATTCTCTGGTCAAGATTCATCCAACTTCAAATCCCCCACAGCTCCCCACTTTCCTCCTTTCCCTCACACAATTCCCAAACATAACAATCTAAGAGCTCTAATCTTGAGCTATCTCACATACCCATTTCAAATCTCTGGCGGAAAATCGTTGAAGGGGTTTCCTTTTCGTTTCTCAAATCGACTCACAGGCGAGGGGGGGTCGATTTTGATTAGCGTATTTCCTCTGGTTTTATCTTTCTAAAAGGATGGTGGGAGCTTTATCTATGGTGGGTTCTTCAGTAGTGGATTCTCATACTTCCCCCTGTTTGTGTTTGGATGCTTTGCCCACAACCAGCATCAATCTCAAAAGTTGTGGGGATTTTGTAATGAAAAAGAAATATTCAATGGGTCGACAGCGTTTGCCGAAACCCAAGCACTTGGATCTAAGCAGCTCGTTTGTCGATAATGGCCTGGAGTGGCTGCTCTCGGTTGATATGATAAATAGGAGTTCAAGGAAGCAGACCAAGAATAGAAGACTTGTGGTTGTTGATGAACTTGGGGGGCAGTATGAAGATAACTTTGATGATGTTAAAATGCAAATGCTTAATTATTTTACATACAAAGCTGTGAGGACTGTTATGAACCAGCTGTATGAAATGAACCCCCCACAGTACAGGTGGCTTTACGATTTCGTGTTAAACAACAAGCCAACAGACGGAAAGCATTTCATCCGAAGGCTTGTGAAGGAACAGCAAGATCTTGCTGAAAGAGTAATGATCACACGTCTCCACCTCTATGGAAAATGGGTGAAGAAATGTAACCATGCGGAAATATACCAAGAGATCTCGGACGAAAATGTGGAATTAATGCGAGAACGACTTATGCAGACTGTTATATGGCCTTCAGATGACACAAATACAGAGAAGATTGGCTAAAGAAAGTATCGAGTCATTTTGAGTTCTCTCCCTTGACATTCTTATTGTATTGCATCCTTCAATCGTAATTAGTTTGATTGTCGAGTTGCCGATCTTATTCTCACCGGTCAAGAAGTAGAAGATCAGTGCTGCAGTCTTTTTTTTTTTCTCCTTTGGTTGAAGATATGTATGTAATCAATCATTATATAATGTAAGATGTACATACATTTAGCATCCATTTTAGTTATTGTGAAGGTATAATGTAGAGCTGGGATTTCATCTGTGCTTCTATTTATTCATATGCATATTG

Coding sequence (CDS)

ATGGTGGGAGCTTTATCTATGGTGGGTTCTTCAGTAGTGGATTCTCATACTTCCCCCTGTTTGTGTTTGGATGCTTTGCCCACAACCAGCATCAATCTCAAAAGTTGTGGGGATTTTGTAATGAAAAAGAAATATTCAATGGGTCGACAGCGTTTGCCGAAACCCAAGCACTTGGATCTAAGCAGCTCGTTTGTCGATAATGGCCTGGAGTGGCTGCTCTCGGTTGATATGATAAATAGGAGTTCAAGGAAGCAGACCAAGAATAGAAGACTTGTGGTTGTTGATGAACTTGGGGGGCAGTATGAAGATAACTTTGATGATGTTAAAATGCAAATGCTTAATTATTTTACATACAAAGCTGTGAGGACTGTTATGAACCAGCTGTATGAAATGAACCCCCCACAGTACAGGTGGCTTTACGATTTCGTGTTAAACAACAAGCCAACAGACGGAAAGCATTTCATCCGAAGGCTTGTGAAGGAACAGCAAGATCTTGCTGAAAGAGTAATGATCACACGTCTCCACCTCTATGGAAAATGGGTGAAGAAATGTAACCATGCGGAAATATACCAAGAGATCTCGGACGAAAATGTGGAATTAATGCGAGAACGACTTATGCAGACTGTTATATGGCCTTCAGATGACACAAATACAGAGAAGATTGGCTAA

Protein sequence

MVGALSMVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKYSMGRQRLPKPKHLDLSSSFVDNGLEWLLSVDMINRSSRKQTKNRRLVVVDELGGQYEDNFDDVKMQMLNYFTYKAVRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKWVKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG
Homology
BLAST of IVF0008324 vs. ExPASy Swiss-Prot
Match: Q8L9X2 (Chaperonin-like RbcX protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBCX2 PE=1 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.4e-63
Identity = 121/218 (55.50%), Postives = 160/218 (73.39%), Query Frame = 0

Query: 1   MVGALSMVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKYSMGRQRLPKPKHLDL 60
           MV A  +VGS V+DS +SPCLCLDA  T +I  K                 L K ++L+L
Sbjct: 1   MVSAWFVVGSPVMDSSSSPCLCLDAHTTGTIRRKKI---------------LGKARNLEL 60

Query: 61  SSSFVDNGLEWLLSVDMINRSSRKQTKNRRLVVVDELGGQYEDNFDDVKMQMLNYFTYKA 120
            SSF  + + + LS   ++R + +++K + L+V +++ G Y+D F DV+ Q++NYFTYKA
Sbjct: 61  GSSFTGSRIVFRLSPKRVSRIANRKSK-KLLIVNEDVAGNYDDTFGDVQKQIVNYFTYKA 120

Query: 121 VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW 180
           VRTV++QLYEMNPPQY W Y+ ++ N+PTDGK F+R L KE Q+LAERVMITRLHLYGKW
Sbjct: 121 VRTVLHQLYEMNPPQYTWFYNHIITNRPTDGKRFLRALGKESQELAERVMITRLHLYGKW 180

Query: 181 VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNT 219
           +KKC+H +IYQEISDEN+ LMRERLM+TVIWPSDDTN+
Sbjct: 181 IKKCDHGKIYQEISDENLALMRERLMETVIWPSDDTNS 202

BLAST of IVF0008324 vs. ExPASy Swiss-Prot
Match: Q8DIS6 (RuBisCO chaperone RbcX OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=rbcX PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.4e-09
Identity = 33/105 (31.43%), Postives = 52/105 (49.52%), Query Frame = 0

Query: 112 MLNYFTYKAVRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMI 171
           +++Y TY+AVRTV+ QL E +PP+  WL+ F       DG+ ++  L +EQ DL  R++ 
Sbjct: 14  LISYLTYQAVRTVIGQLAETDPPRSLWLHQFTSQESIQDGERYLEALFREQPDLGFRILT 73

Query: 172 TRLHL-----------------YGKWVKKCNHAEIYQEISDENVE 200
            R HL                      ++C   E   ++S+ NVE
Sbjct: 74  VREHLAEMVADYLPEMLRAGIQQANLQQRCQQLERMTQVSEANVE 118

BLAST of IVF0008324 vs. ExPASy Swiss-Prot
Match: O86418 (RuBisCO chaperone RbcX OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rbcX PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.3e-08
Identity = 35/99 (35.35%), Postives = 54/99 (54.55%), Query Frame = 0

Query: 107 DVKMQMLNYFTYKAVRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLA 166
           D    + +Y TY+A+ TV+ QL E NPP   WL+ F +  K  DG+ +++ L +EQ DLA
Sbjct: 9   DTAKTLQSYLTYQALMTVLAQLGETNPPLALWLHTFSV-GKVQDGEAYVKELFREQPDLA 68

Query: 167 ERVMITRLHLYGKWVKKCNHAEIYQEISDENVELMRERL 206
            R+M  R H+  + V +     +   I   N+E  R+ L
Sbjct: 69  LRIMTVREHI-AEEVAEFLPEMVRSGIQQANMEQRRQHL 105

BLAST of IVF0008324 vs. ExPASy Swiss-Prot
Match: Q44212 (RuBisCO chaperone RbcX OS=Anabaena sp. (strain CA / ATCC 33047) OX=52271 GN=rbcX PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-07
Identity = 35/99 (35.35%), Postives = 53/99 (53.54%), Query Frame = 0

Query: 107 DVKMQMLNYFTYKAVRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLA 166
           D    + +Y TY+A+RTV+ QL E NPP   WL++F    K  DG+ +I  L  E+ DLA
Sbjct: 9   DTAKTLQSYLTYQALRTVLAQLGETNPPLALWLHNFSA-GKVQDGEKYIEELFLEKPDLA 68

Query: 167 ERVMITRLHLYGKWVKKCNHAEIYQEISDENVELMRERL 206
            R+M  R H+  + + +     +   I   N+E  R+ L
Sbjct: 69  LRIMTVREHI-AEEIAEFLPEMVVTGIQQANMEKRRQHL 105

BLAST of IVF0008324 vs. ExPASy Swiss-Prot
Match: Q55670 (RuBisCO chaperone RbcX OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rbcX PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.1e-04
Identity = 32/113 (28.32%), Postives = 59/113 (52.21%), Query Frame = 0

Query: 114 NYFTYKAVRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITR 173
           +Y TY+AV  + ++L E NPPQ  WL  ++ ++   +G+ F+  L+ E ++L  R++  R
Sbjct: 18  SYLTYQAVLRIQSELGETNPPQAIWLNQYLASHSIQNGETFLTELLDENKELVLRILAVR 77

Query: 174 LHLYGKWVKKCNHAEIYQEISDENVELMR---ERLMQTVI----WPSDDTNTE 220
             +  + V           +++ N+   R   ERL +TV     +PS+ +N E
Sbjct: 78  EDI-AESVLDFLPGMTRNSLAESNIAHRRHLLERLTRTVAEVDNFPSETSNGE 129

BLAST of IVF0008324 vs. ExPASy TrEMBL
Match: A0A5D3D5P8 (RcbX domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00500 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 1.5e-124
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0

Query: 1   MVGALSMVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKYSMGRQRLPKPKHLDL 60
           MVGALSMVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKYSMGRQRLPKPKHLDL
Sbjct: 1   MVGALSMVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKYSMGRQRLPKPKHLDL 60

Query: 61  SSSFVDNGLEWLLSVDMINRSSRKQTKNRRLVVVDELGGQYEDNFDDVKMQMLNYFTYKA 120
           SSSFVDNGLEWLLSVDMINRSSRKQTKNRRLVVVDELGGQYEDNFDDVKMQMLNYFTYKA
Sbjct: 61  SSSFVDNGLEWLLSVDMINRSSRKQTKNRRLVVVDELGGQYEDNFDDVKMQMLNYFTYKA 120

Query: 121 VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW 180
           VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW
Sbjct: 121 VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW 180

Query: 181 VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG 223
           VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG
Sbjct: 181 VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG 222

BLAST of IVF0008324 vs. ExPASy TrEMBL
Match: A0A1S3BNK3 (uncharacterized protein LOC103492031 OS=Cucumis melo OX=3656 GN=LOC103492031 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 1.5e-124
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0

Query: 1   MVGALSMVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKYSMGRQRLPKPKHLDL 60
           MVGALSMVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKYSMGRQRLPKPKHLDL
Sbjct: 1   MVGALSMVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKYSMGRQRLPKPKHLDL 60

Query: 61  SSSFVDNGLEWLLSVDMINRSSRKQTKNRRLVVVDELGGQYEDNFDDVKMQMLNYFTYKA 120
           SSSFVDNGLEWLLSVDMINRSSRKQTKNRRLVVVDELGGQYEDNFDDVKMQMLNYFTYKA
Sbjct: 61  SSSFVDNGLEWLLSVDMINRSSRKQTKNRRLVVVDELGGQYEDNFDDVKMQMLNYFTYKA 120

Query: 121 VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW 180
           VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW
Sbjct: 121 VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW 180

Query: 181 VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG 223
           VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG
Sbjct: 181 VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG 222

BLAST of IVF0008324 vs. ExPASy TrEMBL
Match: A0A0A0LXJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613600 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.3e-122
Identity = 218/222 (98.20%), Postives = 220/222 (99.10%), Query Frame = 0

Query: 1   MVGALSMVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKYSMGRQRLPKPKHLDL 60
           MVGALSMVGSSVVDSH+SPCLCLDALPTTSINLKSCGDFVMKKKYS GRQRLPKPKHLDL
Sbjct: 1   MVGALSMVGSSVVDSHSSPCLCLDALPTTSINLKSCGDFVMKKKYSKGRQRLPKPKHLDL 60

Query: 61  SSSFVDNGLEWLLSVDMINRSSRKQTKNRRLVVVDELGGQYEDNFDDVKMQMLNYFTYKA 120
           SSSFVDNG EWLLSVDMINRSSRKQTKNRRL+VVDELGGQYEDNFDDVKMQMLNYFTYKA
Sbjct: 61  SSSFVDNGREWLLSVDMINRSSRKQTKNRRLMVVDELGGQYEDNFDDVKMQMLNYFTYKA 120

Query: 121 VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW 180
           VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW
Sbjct: 121 VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW 180

Query: 181 VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG 223
           VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG
Sbjct: 181 VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG 222

BLAST of IVF0008324 vs. ExPASy TrEMBL
Match: A0A6J1HZ31 (chaperonin-like RbcX protein 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467533 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 6.0e-110
Identity = 200/222 (90.09%), Postives = 210/222 (94.59%), Query Frame = 0

Query: 1   MVGALSMVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKYSMGRQRLPKPKHLDL 60
           MV  LS+VGSSVVDSHTSPCLCLD LPTTSINLKS GDFVM KK+SMGR+RLPKPKHLDL
Sbjct: 1   MVRGLSVVGSSVVDSHTSPCLCLDILPTTSINLKSSGDFVM-KKHSMGRKRLPKPKHLDL 60

Query: 61  SSSFVDNGLEWLLSVDMINRSSRKQTKNRRLVVVDELGGQYEDNFDDVKMQMLNYFTYKA 120
           SSSFVD G EWLLS DMINRSSRKQ KNRRLVV+DELGGQYED FDDVKMQ+LNYFTYKA
Sbjct: 61  SSSFVDAGREWLLSADMINRSSRKQHKNRRLVVIDELGGQYEDTFDDVKMQILNYFTYKA 120

Query: 121 VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW 180
           VRTVMNQLYEMNPP YRWLYDFVL+NKP+DGKHFIR LVKE+QDLAERVMITRLHLYGKW
Sbjct: 121 VRTVMNQLYEMNPPTYRWLYDFVLSNKPSDGKHFIRTLVKERQDLAERVMITRLHLYGKW 180

Query: 181 VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG 223
           VKKCNHAEIYQEIS+ENVELMRERLM+TVIWPSDDTNTEKIG
Sbjct: 181 VKKCNHAEIYQEISNENVELMRERLMETVIWPSDDTNTEKIG 221

BLAST of IVF0008324 vs. ExPASy TrEMBL
Match: A0A6J1EJF5 (chaperonin-like RbcX protein 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111433858 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.7e-109
Identity = 199/222 (89.64%), Postives = 209/222 (94.14%), Query Frame = 0

Query: 1   MVGALSMVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKYSMGRQRLPKPKHLDL 60
           MV  LS+VGSSVVDSHTSPCLCLD LPTTSINLKS GDFVMK+  SMGR+RLPKPKHLDL
Sbjct: 1   MVRGLSVVGSSVVDSHTSPCLCLDVLPTTSINLKSSGDFVMKRN-SMGRKRLPKPKHLDL 60

Query: 61  SSSFVDNGLEWLLSVDMINRSSRKQTKNRRLVVVDELGGQYEDNFDDVKMQMLNYFTYKA 120
           SSSFVD G EWLLS DMINRSSRKQ KNRRLVV+DELGGQYED FDDVKMQ+LNYFTYKA
Sbjct: 61  SSSFVDAGREWLLSADMINRSSRKQHKNRRLVVIDELGGQYEDTFDDVKMQILNYFTYKA 120

Query: 121 VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW 180
           VRTVMNQLYEMNPP YRWLYDFVL+NKP+DGKHFIR LVKE+QDLAERVMITRLHLYGKW
Sbjct: 121 VRTVMNQLYEMNPPTYRWLYDFVLSNKPSDGKHFIRTLVKERQDLAERVMITRLHLYGKW 180

Query: 181 VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG 223
           VKKCNHAEIYQEIS+ENVELMRERLM+TVIWPSDDTNTEKIG
Sbjct: 181 VKKCNHAEIYQEISNENVELMRERLMETVIWPSDDTNTEKIG 221

BLAST of IVF0008324 vs. NCBI nr
Match: XP_008450421.1 (PREDICTED: uncharacterized protein LOC103492031 [Cucumis melo] >TYK18852.1 RcbX domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 457 bits (1175), Expect = 2.69e-162
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0

Query: 1   MVGALSMVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKYSMGRQRLPKPKHLDL 60
           MVGALSMVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKYSMGRQRLPKPKHLDL
Sbjct: 1   MVGALSMVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKYSMGRQRLPKPKHLDL 60

Query: 61  SSSFVDNGLEWLLSVDMINRSSRKQTKNRRLVVVDELGGQYEDNFDDVKMQMLNYFTYKA 120
           SSSFVDNGLEWLLSVDMINRSSRKQTKNRRLVVVDELGGQYEDNFDDVKMQMLNYFTYKA
Sbjct: 61  SSSFVDNGLEWLLSVDMINRSSRKQTKNRRLVVVDELGGQYEDNFDDVKMQMLNYFTYKA 120

Query: 121 VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW 180
           VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW
Sbjct: 121 VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW 180

Query: 181 VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG 222
           VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG
Sbjct: 181 VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG 222

BLAST of IVF0008324 vs. NCBI nr
Match: XP_004139034.1 (chaperonin-like RbcX protein 2, chloroplastic [Cucumis sativus] >KGN66488.1 hypothetical protein Csa_007379 [Cucumis sativus])

HSP 1 Score: 449 bits (1156), Expect = 2.12e-159
Identity = 218/222 (98.20%), Postives = 220/222 (99.10%), Query Frame = 0

Query: 1   MVGALSMVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKYSMGRQRLPKPKHLDL 60
           MVGALSMVGSSVVDSH+SPCLCLDALPTTSINLKSCGDFVMKKKYS GRQRLPKPKHLDL
Sbjct: 1   MVGALSMVGSSVVDSHSSPCLCLDALPTTSINLKSCGDFVMKKKYSKGRQRLPKPKHLDL 60

Query: 61  SSSFVDNGLEWLLSVDMINRSSRKQTKNRRLVVVDELGGQYEDNFDDVKMQMLNYFTYKA 120
           SSSFVDNG EWLLSVDMINRSSRKQTKNRRL+VVDELGGQYEDNFDDVKMQMLNYFTYKA
Sbjct: 61  SSSFVDNGREWLLSVDMINRSSRKQTKNRRLMVVDELGGQYEDNFDDVKMQMLNYFTYKA 120

Query: 121 VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW 180
           VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW
Sbjct: 121 VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW 180

Query: 181 VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG 222
           VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG
Sbjct: 181 VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG 222

BLAST of IVF0008324 vs. NCBI nr
Match: XP_038879928.1 (chaperonin-like RbcX protein 2, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 432 bits (1111), Expect = 1.54e-152
Identity = 211/222 (95.05%), Postives = 215/222 (96.85%), Query Frame = 0

Query: 1   MVGALSMVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKYSMGRQRLPKPKHLDL 60
           MVGALS+VGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKK  MGR RLPK KHLDL
Sbjct: 1   MVGALSVVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKNLMGRNRLPKSKHLDL 60

Query: 61  SSSFVDNGLEWLLSVDMINRSSRKQTKNRRLVVVDELGGQYEDNFDDVKMQMLNYFTYKA 120
           SSSFVDNG EWLLS DMINRSSRKQ KNRRLVVVDELGGQYEDNFDDVKMQ+LNYFTYKA
Sbjct: 61  SSSFVDNGREWLLSADMINRSSRKQHKNRRLVVVDELGGQYEDNFDDVKMQILNYFTYKA 120

Query: 121 VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW 180
           VRTVMNQLYEMNPPQYRWLYDFVL+NKPTDGK+FIRRLVKEQQDLAERVMITRLHLYGKW
Sbjct: 121 VRTVMNQLYEMNPPQYRWLYDFVLSNKPTDGKYFIRRLVKEQQDLAERVMITRLHLYGKW 180

Query: 181 VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG 222
           VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG
Sbjct: 181 VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG 222

BLAST of IVF0008324 vs. NCBI nr
Match: XP_038879929.1 (chaperonin-like RbcX protein 2, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 414 bits (1064), Expect = 1.96e-145
Identity = 206/222 (92.79%), Postives = 210/222 (94.59%), Query Frame = 0

Query: 1   MVGALSMVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKYSMGRQRLPKPKHLDL 60
           MVGALS+VGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKK  MGR RLPK KHLDL
Sbjct: 1   MVGALSVVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKNLMGRNRLPKSKHLDL 60

Query: 61  SSSFVDNGLEWLLSVDMINRSSRKQTKNRRLVVVDELGGQYEDNFDDVKMQMLNYFTYKA 120
           SSSFVDNG EWLLS DMINRSSRKQ KNRRLVVVDELGGQYEDNFDDVKMQ+LNYFTYKA
Sbjct: 61  SSSFVDNGREWLLSADMINRSSRKQHKNRRLVVVDELGGQYEDNFDDVKMQILNYFTYKA 120

Query: 121 VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW 180
           VRTVMNQLYEMNPPQ    Y FVL+NKPTDGK+FIRRLVKEQQDLAERVMITRLHLYGKW
Sbjct: 121 VRTVMNQLYEMNPPQ----YSFVLSNKPTDGKYFIRRLVKEQQDLAERVMITRLHLYGKW 180

Query: 181 VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG 222
           VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG
Sbjct: 181 VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG 218

BLAST of IVF0008324 vs. NCBI nr
Match: XP_022968239.1 (chaperonin-like RbcX protein 2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 408 bits (1049), Expect = 4.22e-143
Identity = 200/222 (90.09%), Postives = 210/222 (94.59%), Query Frame = 0

Query: 1   MVGALSMVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKYSMGRQRLPKPKHLDL 60
           MV  LS+VGSSVVDSHTSPCLCLD LPTTSINLKS GDFVMKK +SMGR+RLPKPKHLDL
Sbjct: 1   MVRGLSVVGSSVVDSHTSPCLCLDILPTTSINLKSSGDFVMKK-HSMGRKRLPKPKHLDL 60

Query: 61  SSSFVDNGLEWLLSVDMINRSSRKQTKNRRLVVVDELGGQYEDNFDDVKMQMLNYFTYKA 120
           SSSFVD G EWLLS DMINRSSRKQ KNRRLVV+DELGGQYED FDDVKMQ+LNYFTYKA
Sbjct: 61  SSSFVDAGREWLLSADMINRSSRKQHKNRRLVVIDELGGQYEDTFDDVKMQILNYFTYKA 120

Query: 121 VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW 180
           VRTVMNQLYEMNPP YRWLYDFVL+NKP+DGKHFIR LVKE+QDLAERVMITRLHLYGKW
Sbjct: 121 VRTVMNQLYEMNPPTYRWLYDFVLSNKPSDGKHFIRTLVKERQDLAERVMITRLHLYGKW 180

Query: 181 VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG 222
           VKKCNHAEIYQEIS+ENVELMRERLM+TVIWPSDDTNTEKIG
Sbjct: 181 VKKCNHAEIYQEISNENVELMRERLMETVIWPSDDTNTEKIG 221

BLAST of IVF0008324 vs. TAIR 10
Match: AT5G19855.1 (Chaperonin-like RbcX protein )

HSP 1 Score: 244.2 bits (622), Expect = 9.9e-65
Identity = 121/218 (55.50%), Postives = 160/218 (73.39%), Query Frame = 0

Query: 1   MVGALSMVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKYSMGRQRLPKPKHLDL 60
           MV A  +VGS V+DS +SPCLCLDA  T +I  K                 L K ++L+L
Sbjct: 1   MVSAWFVVGSPVMDSSSSPCLCLDAHTTGTIRRKKI---------------LGKARNLEL 60

Query: 61  SSSFVDNGLEWLLSVDMINRSSRKQTKNRRLVVVDELGGQYEDNFDDVKMQMLNYFTYKA 120
            SSF  + + + LS   ++R + +++K + L+V +++ G Y+D F DV+ Q++NYFTYKA
Sbjct: 61  GSSFTGSRIVFRLSPKRVSRIANRKSK-KLLIVNEDVAGNYDDTFGDVQKQIVNYFTYKA 120

Query: 121 VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW 180
           VRTV++QLYEMNPPQY W Y+ ++ N+PTDGK F+R L KE Q+LAERVMITRLHLYGKW
Sbjct: 121 VRTVLHQLYEMNPPQYTWFYNHIITNRPTDGKRFLRALGKESQELAERVMITRLHLYGKW 180

Query: 181 VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNT 219
           +KKC+H +IYQEISDEN+ LMRERLM+TVIWPSDDTN+
Sbjct: 181 IKKCDHGKIYQEISDENLALMRERLMETVIWPSDDTNS 202

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8L9X21.4e-6355.50Chaperonin-like RbcX protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN... [more]
Q8DIS64.4e-0931.43RuBisCO chaperone RbcX OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 ... [more]
O864186.3e-0835.35RuBisCO chaperone RbcX OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) O... [more]
Q442121.4e-0735.35RuBisCO chaperone RbcX OS=Anabaena sp. (strain CA / ATCC 33047) OX=52271 GN=rbcX... [more]
Q556701.1e-0428.32RuBisCO chaperone RbcX OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=111170... [more]
Match NameE-valueIdentityDescription
A0A5D3D5P81.5e-124100.00RcbX domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A1S3BNK31.5e-124100.00uncharacterized protein LOC103492031 OS=Cucumis melo OX=3656 GN=LOC103492031 PE=... [more]
A0A0A0LXJ92.3e-12298.20Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613600 PE=4 SV=1[more]
A0A6J1HZ316.0e-11090.09chaperonin-like RbcX protein 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1EJF51.7e-10989.64chaperonin-like RbcX protein 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=L... [more]
Match NameE-valueIdentityDescription
XP_008450421.12.69e-162100.00PREDICTED: uncharacterized protein LOC103492031 [Cucumis melo] >TYK18852.1 RcbX ... [more]
XP_004139034.12.12e-15998.20chaperonin-like RbcX protein 2, chloroplastic [Cucumis sativus] >KGN66488.1 hypo... [more]
XP_038879928.11.54e-15295.05chaperonin-like RbcX protein 2, chloroplastic isoform X1 [Benincasa hispida][more]
XP_038879929.11.96e-14592.79chaperonin-like RbcX protein 2, chloroplastic isoform X2 [Benincasa hispida][more]
XP_022968239.14.22e-14390.09chaperonin-like RbcX protein 2, chloroplastic [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT5G19855.19.9e-6555.50Chaperonin-like RbcX protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038052Chaperonin-like RbcX superfamilyGENE3D1.10.1200.210coord: 94..219
e-value: 2.0E-49
score: 168.6
IPR038052Chaperonin-like RbcX superfamilySUPERFAMILY158615RbcX-likecoord: 100..219
IPR003435Chaperonin-like RbcXPFAMPF02341RcbXcoord: 111..208
e-value: 4.3E-20
score: 72.1
IPR003435Chaperonin-like RbcXPANTHERPTHR33791FAMILY NOT NAMEDcoord: 1..222
NoneNo IPR availablePANTHERPTHR33791:SF1CHAPERONIN-LIKE RBCX PROTEIN 2, CHLOROPLASTICcoord: 1..222

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0008324.1IVF0008324.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015977 carbon fixation
biological_process GO:0015979 photosynthesis
biological_process GO:0006457 protein folding
biological_process GO:0110102 ribulose bisphosphate carboxylase complex assembly
molecular_function GO:0044183 protein folding chaperone