IVF0008324 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTTAATTCATATTAATGTCGATCGAACTAATTCATATTAATATCGATTGAACTAAACTCTTATCAATTTACGAGGAGCTTTTAAACTTTCTATTACCATTATCTATGGTTGAATACCGTCCACACATAGTAAAGCATATTGACCATGAGGGAGCTTGAATTCCAACCTCGAATGGTTAGAAAACCCACCAAATTCAAGAAACCGTCCAGATGAATTCAAGTATGAAATCCAAAATATCTAATATTGAAGCTTTATTTGGGGAAAAATGGAAAAGATTTTCAAAAGCTTTTTTGAGCTGGAGAATTTTGGACCTCACCAAATTCTCTGGTCAAGATTCATCCAACTTCAAATCCCCCACAGCTCCCCACTTTCCTCCTTTCCCTCACACAATTCCCAAACATAACAATCTAAGAGCTCTAATCTTGAGCTATCTCACATACCCATTTCAAATCTCTGGCGGAAAATCGTTGAAGGGGTTTCCTTTTCGTTTCTCAAATCGACTCACAGGCGAGGGGGGGTCGATTTTGATTAGCGTATTTCCTCTGGTTTTATCTTTCTAAAAGGATGGTGGGAGCTTTATCTATGGTGGGTTCTTCAGTAGTGGATTCTCATACTTCCCCCTGTTTGTGTTTGGATGCTTTGCCCACAACCAGCATCAATCTCAAAAGTTGTGGGGATTTTGTAATGAAAAAGAAATATTCAATGGGTCGACAGCGTTTGCCGAAACCCAAGCACTTGGATCTAAGCAGCTCGTTTGTCGATAATGGCCTGGAGTGGCTGCTCTCGGTTGATATGATAAATAGGAGTTCAAGGAAGCAGACCAAGAATAGAAGACTTGTGGTTGTTGATGAACTTGGGGGGCAGTATGAAGATAACTTTGATGATGTTAAAATGGTAAGAATGTGAATTTGGAATTGTTATTCATCTGTATGCTTAAGACTGAATTTAGATTGGTATTTAAGCACGTTTTGGTAGTTTCTTGTGTTGCTGAAATGTATGTTACTGAATTTGGATAAGAAATCCCATGTAGCTTAATGAACGGTTTAACGGTTTAAGTCTAATCCAAAAGTGCTTTGACTGTGTGCTGTGGTTCTAGCTTTGTGTAGTGTTTGGAGCTATTTTCATTTTGATAAGACATGATTTTGGGTACTTTGGAGATTATAGTTCTTGGAAGGCTTCCTTTTAGACAACTTTACTTGAACAAATCTGTATCCTTGAGGTTATACAACTGTATCCTTGAGTTCTAAGGAAGGCTTCCTTTTGGTTTTGCAATGATTTGGTTACAATTCATCTACGGTATGCAGTCTTAGGAATTCACATTTCTTTCTAGTACCTTGATTCTTTTACTACGTTGATAAACATCTATGATATAGGACAACGCTACCATAATTGTTGTAATGAGGTGATTCAGATGCAGATGGGGTTCTCAGCATAGGAAAATTGTGAAAATCCTTTCTTCCAAATGATCAAGCGAAGGTTTGACTGAGAGCTGAGAAAGTTGGCCTTTCTACTAATACTTTAAAGGCATGCTAGACTCTAGACTAACAGCACTAGCACGTGTTCTCTTGCTTGCTAGTGCTTTCGAAGATTGGAGGGCATTCGTTATCGACTTTAGTAAGCTAGCTAGAAATAACTTCTTGGATGCTGTGGACTTGGTTGACCGTAACAAATGGTATTAGAGCCAAAATTTCGGTTACACCATGGTTAAGAGGAGTTTCTGTCTTATGTAATATTGGGGAATGTACTAACACATAAATACAACATAAAGAAGTAATACAAAATAAAAAATTGTAAATTGCAAAAGATTGTCCCACACTTATACTTCCACATAATCGCTATACTAAAGGACCTATTACTAGAATAGCTTTCAATACACAAATTACAATTTTGACTGCTGAACGACCAATTTCCAAGGTAAGGAATAGGAATAGAAGCACGTTGGTCAATACAGCAATACTCACAATTGTTACTTAAGTCGACTCACGGAGGCTATTTAAAGCCACCAGTGATATACACATGCAATACAAAAACCAACAGGTTGATGCAAGAGGCAACTGGAAGTGTTATTTTTATGCTTATGAGATATGCTTGAGATTTTAATTTTTCATTAAGTTTGTTATAGTCAGGTCCTGCATTTTCAAATTATTGGTTGATACTTCTTTTTAGTTTGATTTTAGTGACTTTCCAGTTTCTTGAGCTTTATCTTCTCCCATCCTTTGCTAATTCATTTGCCTACGAATTAATTAGTGAATTGACTGAAATTTCTCTGGCCCAGCAAATGCTTAATTATTTTACATACAAAGCTGTGAGGACTGTTATGAACCAGCTGTATGAAATGAACCCCCCACAGTACAGGTGGCTTTACGAGTACGTGCTATCTTTTGTTGCACTCTGAGACTTGCTTTTTTAATTAATTTATTTATTTTATTTTTTCTGTGTTACAGCATAACTGGAGTCAGTTTACTATGTTGGTTTCGATATAGACGCATGAAATAGTTGCAGTATTTTATATCATGCAAAATCAAGTTTGGCTGTCAAATTATTTCTTGTTAGAATGGACTTGGTCTTAAATTTTGATTCATATGTTTTCTTACTCACAGTTTCGTGTTAAACAACAAGCCAACAGACGGAAAGCATTTCATCCGAAGGCTTGTGAAGGTACTTCTAAAAATTATTACCTACCTTCATGACTTGGATACTTTTTCTGTGACAAACAAGTAACCGTCATTTCATTAATGAGAGGAAATTACAAAAAGGTTCGAGTGATCATTAGAATCACAAAAAAATTGCCAATGAATGGAAAGAGAAGTTAGGCGTGTTAGTAAAAGAGTTTAAATCTTTAGCTTTTTCCTTGAAGATGCAGACGGTTTTTCTTGAGCGATAATAACCAAAGGATGGCTTCATTGTGAGAGATCCGTAAACCTCTTTACTAATGTATGACTTGGAAACTAATTGGTTGTACGGAGAAGCAAAGCTTATCTAATCGATGCTTCGCATATGTTTTTCGCTATCGATTTTAGGGCCTGTTATATTTTGGAGTGATAGTTGATTAAAGGCATGCTTTAGAATGATTTTAAGTGCAGTAATAGTGATTTTAACCATTTCCAAATCACTCACAAACATATCATTAGACTCTTACTATAACTTGTTCCCAAAGTTCTTATGCTTGCTTGCCTTTTTAGGCCTACCGTAGCACAAAGATGTTACAAAATATGATACGTTTCAATATGATTGTTAAATTGTGTACACTATGCTTTAACTTCTAGTTTAGTCTACAAGTTTCATTATAGTCTATTTATTGATTAAACCTGCTACTAAGTAATATTAAATGCACCATGTACATAAACATTCTCTAACAAGTGAAAAAACAATTGTTCTAAGTGTGTATAAAGCTCCATAATTTGCTGACAAATTTGAAGTAGGAAAAAGAGCTAAATTCAAAGATTTGTTTCTAGGATGGAGGTTTAGTATGTGAAAAATGAATATACATATTAGAGTGAGAAAAAACTGTGGACCTCAAGATTGCATGCCAAGTTACACGAAGGCCTGTGCCTAATTGAGGCCATTTTGCTTGACAATAAGTCAGCTTAAATACACAACTAAAATATTTTCTTTTACTTCAGAATCCCAAATATTTCAGTTTAAAGTTAGAGCATCAAGGTTTAAGGTCATTTACGGTGCGGTAGATGTGGAATGGTTGACCACACCCACCAAACTTGTGTTTACCACTATTGACAAGAATTGAACGCATGTATTGTAACAAAATCATTATAGTTGTGTATTTAAGCTTGACACAAGGTTAGCTTAAATACACTGCTAAAATGGTTTCTTTTACTTGTGGATTCCGAACATTCCAGCTCTAAAATAGCGTTTTACTGCACCTGAATCATTGTTTTCCTAATTGACAGGAACAGCAAGATCTTGCTGAAAGAGTAATGATCACACGTCTCCACCTCTATGGAAAATGGGTGAAGGTATTGTTATCATTGTCGTATTCCTTTCCTTTCAATACAATATGTTCTTCTAATTATAGGAAGACCAGTATTTATATAAATGGAAACAAAAGCATGCAAAAATTTATTTCTTCTGTGGTGTAGAAATGTAACCATGCGGAAATATACCAAGAGATCTCGGACGAAAATGTGGAATTAATGCGAGAACGACTTATGCAGACTGTTATATGGCCTTCAGATGACACAAATACAGAGAAGATTGGCTAAAGAAAGTATCGAGTCATTTTGAGTTCTCTCCCTTGACATTCTTATTGTATTGCATCCTTCAATCGTAATTAGTTTGATTGTCGAGTTGCCGATCTTATTCTCACCGGTCAAGAAGTAGAAGATCAGTGCTGCAGTCTTTTTTTTTTTCTCCTTTGGTTGAAGATATGTATGTAATCAATCATTATATAATGTAAGATGTACATACATTTAGCATCCATTTTAGTTATTGTGAAGGTATAATGTAGAGCTGGGATTTCATCTGTGCTTCTATTTATTCATATGCATATTG TGTTAATTCATATTAATGTCGATCGAACTAATTCATATTAATATCGATTGAACTAAACTCTTATCAATTTACGAGGAGCTTTTAAACTTTCTATTACCATTATCTATGGTTGAATACCGTCCACACATAGTAAAGCATATTGACCATGAGGGAGCTTGAATTCCAACCTCGAATGGTTAGAAAACCCACCAAATTCAAGAAACCGTCCAGATGAATTCAAGTATGAAATCCAAAATATCTAATATTGAAGCTTTATTTGGGGAAAAATGGAAAAGATTTTCAAAAGCTTTTTTGAGCTGGAGAATTTTGGACCTCACCAAATTCTCTGGTCAAGATTCATCCAACTTCAAATCCCCCACAGCTCCCCACTTTCCTCCTTTCCCTCACACAATTCCCAAACATAACAATCTAAGAGCTCTAATCTTGAGCTATCTCACATACCCATTTCAAATCTCTGGCGGAAAATCGTTGAAGGGGTTTCCTTTTCGTTTCTCAAATCGACTCACAGGCGAGGGGGGGTCGATTTTGATTAGCGTATTTCCTCTGGTTTTATCTTTCTAAAAGGATGGTGGGAGCTTTATCTATGGTGGGTTCTTCAGTAGTGGATTCTCATACTTCCCCCTGTTTGTGTTTGGATGCTTTGCCCACAACCAGCATCAATCTCAAAAGTTGTGGGGATTTTGTAATGAAAAAGAAATATTCAATGGGTCGACAGCGTTTGCCGAAACCCAAGCACTTGGATCTAAGCAGCTCGTTTGTCGATAATGGCCTGGAGTGGCTGCTCTCGGTTGATATGATAAATAGGAGTTCAAGGAAGCAGACCAAGAATAGAAGACTTGTGGTTGTTGATGAACTTGGGGGGCAGTATGAAGATAACTTTGATGATGTTAAAATGCAAATGCTTAATTATTTTACATACAAAGCTGTGAGGACTGTTATGAACCAGCTGTATGAAATGAACCCCCCACAGTACAGGTGGCTTTACGATTTCGTGTTAAACAACAAGCCAACAGACGGAAAGCATTTCATCCGAAGGCTTGTGAAGGAACAGCAAGATCTTGCTGAAAGAGTAATGATCACACGTCTCCACCTCTATGGAAAATGGGTGAAGAAATGTAACCATGCGGAAATATACCAAGAGATCTCGGACGAAAATGTGGAATTAATGCGAGAACGACTTATGCAGACTGTTATATGGCCTTCAGATGACACAAATACAGAGAAGATTGGCTAAAGAAAGTATCGAGTCATTTTGAGTTCTCTCCCTTGACATTCTTATTGTATTGCATCCTTCAATCGTAATTAGTTTGATTGTCGAGTTGCCGATCTTATTCTCACCGGTCAAGAAGTAGAAGATCAGTGCTGCAGTCTTTTTTTTTTTCTCCTTTGGTTGAAGATATGTATGTAATCAATCATTATATAATGTAAGATGTACATACATTTAGCATCCATTTTAGTTATTGTGAAGGTATAATGTAGAGCTGGGATTTCATCTGTGCTTCTATTTATTCATATGCATATTG ATGGTGGGAGCTTTATCTATGGTGGGTTCTTCAGTAGTGGATTCTCATACTTCCCCCTGTTTGTGTTTGGATGCTTTGCCCACAACCAGCATCAATCTCAAAAGTTGTGGGGATTTTGTAATGAAAAAGAAATATTCAATGGGTCGACAGCGTTTGCCGAAACCCAAGCACTTGGATCTAAGCAGCTCGTTTGTCGATAATGGCCTGGAGTGGCTGCTCTCGGTTGATATGATAAATAGGAGTTCAAGGAAGCAGACCAAGAATAGAAGACTTGTGGTTGTTGATGAACTTGGGGGGCAGTATGAAGATAACTTTGATGATGTTAAAATGCAAATGCTTAATTATTTTACATACAAAGCTGTGAGGACTGTTATGAACCAGCTGTATGAAATGAACCCCCCACAGTACAGGTGGCTTTACGATTTCGTGTTAAACAACAAGCCAACAGACGGAAAGCATTTCATCCGAAGGCTTGTGAAGGAACAGCAAGATCTTGCTGAAAGAGTAATGATCACACGTCTCCACCTCTATGGAAAATGGGTGAAGAAATGTAACCATGCGGAAATATACCAAGAGATCTCGGACGAAAATGTGGAATTAATGCGAGAACGACTTATGCAGACTGTTATATGGCCTTCAGATGACACAAATACAGAGAAGATTGGCTAA MVGALSMVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKYSMGRQRLPKPKHLDLSSSFVDNGLEWLLSVDMINRSSRKQTKNRRLVVVDELGGQYEDNFDDVKMQMLNYFTYKAVRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKWVKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG Homology
BLAST of IVF0008324 vs. ExPASy Swiss-Prot
Match: Q8L9X2 (Chaperonin-like RbcX protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBCX2 PE=1 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 1.4e-63 Identity = 121/218 (55.50%), Postives = 160/218 (73.39%), Query Frame = 0
BLAST of IVF0008324 vs. ExPASy Swiss-Prot
Match: Q8DIS6 (RuBisCO chaperone RbcX OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=rbcX PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 4.4e-09 Identity = 33/105 (31.43%), Postives = 52/105 (49.52%), Query Frame = 0
BLAST of IVF0008324 vs. ExPASy Swiss-Prot
Match: O86418 (RuBisCO chaperone RbcX OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rbcX PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 6.3e-08 Identity = 35/99 (35.35%), Postives = 54/99 (54.55%), Query Frame = 0
BLAST of IVF0008324 vs. ExPASy Swiss-Prot
Match: Q44212 (RuBisCO chaperone RbcX OS=Anabaena sp. (strain CA / ATCC 33047) OX=52271 GN=rbcX PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.4e-07 Identity = 35/99 (35.35%), Postives = 53/99 (53.54%), Query Frame = 0
BLAST of IVF0008324 vs. ExPASy Swiss-Prot
Match: Q55670 (RuBisCO chaperone RbcX OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rbcX PE=1 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 1.1e-04 Identity = 32/113 (28.32%), Postives = 59/113 (52.21%), Query Frame = 0
BLAST of IVF0008324 vs. ExPASy TrEMBL
Match: A0A5D3D5P8 (RcbX domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00500 PE=4 SV=1) HSP 1 Score: 455.3 bits (1170), Expect = 1.5e-124 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of IVF0008324 vs. ExPASy TrEMBL
Match: A0A1S3BNK3 (uncharacterized protein LOC103492031 OS=Cucumis melo OX=3656 GN=LOC103492031 PE=4 SV=1) HSP 1 Score: 455.3 bits (1170), Expect = 1.5e-124 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of IVF0008324 vs. ExPASy TrEMBL
Match: A0A0A0LXJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613600 PE=4 SV=1) HSP 1 Score: 448.0 bits (1151), Expect = 2.3e-122 Identity = 218/222 (98.20%), Postives = 220/222 (99.10%), Query Frame = 0
BLAST of IVF0008324 vs. ExPASy TrEMBL
Match: A0A6J1HZ31 (chaperonin-like RbcX protein 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467533 PE=4 SV=1) HSP 1 Score: 406.8 bits (1044), Expect = 6.0e-110 Identity = 200/222 (90.09%), Postives = 210/222 (94.59%), Query Frame = 0
BLAST of IVF0008324 vs. ExPASy TrEMBL
Match: A0A6J1EJF5 (chaperonin-like RbcX protein 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111433858 PE=4 SV=1) HSP 1 Score: 405.2 bits (1040), Expect = 1.7e-109 Identity = 199/222 (89.64%), Postives = 209/222 (94.14%), Query Frame = 0
BLAST of IVF0008324 vs. NCBI nr
Match: XP_008450421.1 (PREDICTED: uncharacterized protein LOC103492031 [Cucumis melo] >TYK18852.1 RcbX domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 457 bits (1175), Expect = 2.69e-162 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of IVF0008324 vs. NCBI nr
Match: XP_004139034.1 (chaperonin-like RbcX protein 2, chloroplastic [Cucumis sativus] >KGN66488.1 hypothetical protein Csa_007379 [Cucumis sativus]) HSP 1 Score: 449 bits (1156), Expect = 2.12e-159 Identity = 218/222 (98.20%), Postives = 220/222 (99.10%), Query Frame = 0
BLAST of IVF0008324 vs. NCBI nr
Match: XP_038879928.1 (chaperonin-like RbcX protein 2, chloroplastic isoform X1 [Benincasa hispida]) HSP 1 Score: 432 bits (1111), Expect = 1.54e-152 Identity = 211/222 (95.05%), Postives = 215/222 (96.85%), Query Frame = 0
BLAST of IVF0008324 vs. NCBI nr
Match: XP_038879929.1 (chaperonin-like RbcX protein 2, chloroplastic isoform X2 [Benincasa hispida]) HSP 1 Score: 414 bits (1064), Expect = 1.96e-145 Identity = 206/222 (92.79%), Postives = 210/222 (94.59%), Query Frame = 0
BLAST of IVF0008324 vs. NCBI nr
Match: XP_022968239.1 (chaperonin-like RbcX protein 2, chloroplastic [Cucurbita maxima]) HSP 1 Score: 408 bits (1049), Expect = 4.22e-143 Identity = 200/222 (90.09%), Postives = 210/222 (94.59%), Query Frame = 0
BLAST of IVF0008324 vs. TAIR 10
Match: AT5G19855.1 (Chaperonin-like RbcX protein ) HSP 1 Score: 244.2 bits (622), Expect = 9.9e-65 Identity = 121/218 (55.50%), Postives = 160/218 (73.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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