IVF0008264 (gene) Melon (IVF77) v1

Overview
NameIVF0008264
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description30S ribosomal protein S17, chloroplastic
Locationchr10: 22521734 .. 22531148 (+)
RNA-Seq ExpressionIVF0008264
SyntenyIVF0008264
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGAGAGTTCTTCTCCTTGTGCTTAAACCCTATTTCACGTTAAGCCACCCCGCCCTCCCATTACATGGTACTCCGCCCCACCGCACGCCGTTCCTATCCAGATAGTTCCTGAATCTTTGTAATTTGTAGCAGCTTCAAGCTTAAAAGGGTTTAGGGTTTTCAATCGCTTGCCCAAGATGAAGCAAGTAGTGGGTATGGTGGTTTCAAACAAAATGCAGAAATCAGTTGTCGTTGCAGTGGACAGATTGTTTTATCACAAACTCTATAATCGCTACGTTAAACGCACTTCCAAGTTCATGGCTCATGACGAGAACAACCAGTGCAATATTGGTGACAGGGTGAGAATTTAATTCCATATTTACTTCCCCAATTAATTTGTTTTTACTTCATTTCAATTCGATCGATCAAGTTGTGGACTCCATGTATAGTTTCAGTTACAATATCGTGCAAATTTGTTCGACATCACGGTAGTACTGGATGAAATGGATAGTGTAAAGCATGTTGTCGTGGACCTTCTTTGTGTTTGAACAGTTTATTTGTTAAATTTTCATATGCATTATGTTAATTTATATAATTCTTGTTTCTTTTTCATTTCTCTTGAACATGTACTTTGGGTTTGTTAGTATTTAACGTTTCTAGTTAATCCACTGATGCAACAAATTGAATTTTATAAACTCAGGTTAAATTAGATCCTTCTAGGCCATTGAGCAAGCGTAAACATTGGGTGGTTGCTGAAATTTTGAGGAAAGCACGAATTTACGAGCCACCATCACAAGATAACCAAACTGTTTCAGACAAAAGCAATGTTTCAGCTCCTTCAACCACTTAAGGTTTGATTGACACACTTGTTATTTTCTTTGTAGAAAGGCAAACTTGAATCTTATTGAGTTCTGGATTGTTCTGGGCGATCATAATCACTTGAATCCTTGATGACTATTTGCGGCAACTCTTTGTTTCCATTTAGAGTATGTGGCTGTTGCCGTTGATTGTTATTTATTAGAAATTACTAGAATACATCTTTTTATTGTTCTGTGAACAATATGTCATAACTTGGCATTTTACCATCTTTCTTGATGGCATGGTAGGTTCATGAGCAGGTTTTTTTTTTTTTTTAATGAAATCAAACAGCTTTCATTGAGATCAAAATGAAAGAATACAAGGGCATACAAAAAAACCAGCCCACCAAATCACCCCACTTACGATAAGGGGGACTGTTAGATACCTAGATTAGTATAGGGTAGGGTATAAGGGTAATTAGATATTTTGAACATTTACATGGTTAATAGGAAGTTGGTGAGAGAAGAAGGGGGATCATTTTGTGAGTGGTTTCTGCAAGTTTCCTTGAGAGAGAGGAAAGGTAGAGAGGGTAGTTACTTTCATATTTGTTCTTAATTTACTGCAATTTCATTCCAGAATTGAGTTCATCAATTCTTTCTTGTGATCGTTGAAGTTCATATCAATATAATACGAGCACACTCCTTGGTGTTCTATCAGGGACCAACTAAGTAAAATACTGTCTATGGAGTAGTTACAAAAAGTTCTTTGAAATCGAAGCCCAAAAAGACACATGAAATCTAATGAAGGACCAAATCACACTAAGATCCCTCTCTTTCCCTCGGAACACCCTATCGTTCTGCTCACCCCAAATGTCCTAAATAACCCTACACACCCTGGAAAGCCATAAAAAGCCCCTTTATCTTTGAAAAGCGGATGGAGGAGGAACTCCTCTATCGTCGCTCTGAGGCTACGTAAACTAGCAAAGCTAACACCGAACTCCTGAAGGAAGGAGCTCCACACAACCCTCGCAAATTTGCAATCCTAAAAAAGATGATCAAGATCATTCTCCGCCTTCTGACACAACATGCAACAAAAAAGCCCGACAAGCGAAGTTCTTCTCCTAACAAGCCTATCAACAATGTTAACCTGATCAAGCAAGACTTGCCAGATAAAGAACATAACTTTCTTAGGCACATTAGTACTCCACACCACATCAAAAACCAACTCTTTAGTGGGAGCGGGATCCAACAACAGACTAAACATGGAGAAACCCCAACTAGGATTAGGATTCCAAACATGAATATCCCTTCTCCCCTCTCTAAAAGAGCATCCCTTAAGGAAGGACAGAAGAGAAGCCACCTTTGTCTTCTCCCTATTGGTCAAATTACGACAAAACCCGAAAGAGAAAGACACAAAATTCTCAAATCTCACCAAAAGATCAGAGATGGTGCAATTTTTGGAAGATGATAAATGATACAGATATGGAAATATGTTTCTCCTCCACCCACGGATCCTCTCGAAAATGTATCCTTACTATCCCCCACAATATAGCCAGAAAACTGAGAAAATAAAGGAGCTTGAAAGAGATGTCCTTCCAAGGATTCCAAAAAGTTCCTTTAACCCCTAAAGCCATCCATTCAAAAGATGGGGGCCATGAATGCGCACAACAATCTTATGCCAAAGAGAATTAGATTCCAGATACAAGCACGAAAACCACTTTGCCAACAAAGCGCCCTACCAACTCCCAATTAACCAAATGGGAGCCACCCCACCCCCTCCCACAGGAAATCTCTCATGTACTTTTCAATACTCTTACACACCAAGTAGGGGCCCTAAACAATGAAAGATAATATACTGGAATACCACTTTGCACATACTTAATTGAAGTTAATCTGCCAGCTTTCAAATCTTTTAGGGTTACGTCGATGAGAATGGAATACTTAACACTTCTAACACACCCCACATCCACACCCGCCATTTATAACCACAGCCTTTCCTCTTTACAATCCTATCTAGAAAATTCTTGTCCACATGGTCGTACGCTTTCCCAAAGTCAAAGTTTAACAAAAACCCCTCCAAATTTTCGATCTAGACTCCTCAATAGCTTCATTAGCTAACGAAGCTTGGTCCAAAATCTGCCTACCAGTCAAAAAAGCCCCTTGCGAATTAGAGATTGTCGACAGGAGTATAGTCCTTAGGCGATTAGCAAGTACTTTAGCCAAAATGTTGAAGATGCTAGTAATGAGATTAATAGGCCGAAACTCTTTCACCCTGTTCGCATTTTCCTTTTTGGGAATCAAACAAACTAAGGTTTCAGTCATCGAGCTATTCAGAATACCTCTTTCAAAGAATTCCTTAAAAATCCCCTCCAAGTCTCCTTTGATAAGCTCCCAATTCTCCTTGAAGAACGCCATAGAGAACACATCCGCACCAGGAGACTTGTTACCATCACAGCTGAAGACAACCTTTTTAATATCGTCAACGAAAACCAGGCCACTAACTCCTCATTCTCCCTTGGCGATATAGGACTCCATTCAATGCCCTCCACAAATGTCTTAACTGACACCGTGGGACTATAGAGATTAGAGAAAGAATTTAGGATCTCGTCCTCGGTTTCCTTCCTATCTCTTTCATGAGCAGTTCTTGCTAATAAAATGATTGACATGGTGCGCATCATCCTAAGAAGATTTAGTAATAAAACTAAAATGAAGCATTTTAGTGGTCTTGAGACATATAATGTCTTTGTGAGCAACTAAGATACCCTTCCCATTTGAATCCCTTGTTTGAAATTTGATGATTATGTTGTCTTATTTTTGCTGTATGTTAATGACTTGGTGTTCGTAGTGAACCATGAAACACATCTTGCCTTTTGAAAATGCAGTTCAGAAAGTTTTGCTAGATAAGAGCCTGTATTTTCTTCGCTTCATTTTTCCTTTTAGGTGTTTATTTCATTTTCCTTTAAATGTTTCGTCTATCTTTTCATTTTGAGGAGTTTCAACTTACCCAAAAAGGGACATAATGATAGTATTTCATGGAGGTTCTTTCACAATGATTGATTTATGTTCATTCTGCCCTCCAATTGTTTGCAAACGCATTGCATTTATTCATGCCCTTTTATCTATATAATTCTGGGTTTTGATGAGCCAGGTGGCTGTCTTAAAATACTCATTGGTGATTGTTCGAAATTTTTATTTGAAGTTTGATCCATAGGATACTTTGTCTCCAGAAAGTCCTATCTTGTAGTTGTTCCTAGCGATTTTGGTTGGATTAAGATTAAAACATGTTTCCACGTATCATTTTAGAATTACTAACCTTCAAAACCTGCATTGATTGGCTAATGGTCAACAAGGCTGAAAGTACATACCTAAGATTTAAAATTGTACAAGTGTTTGCTTGGCAACCAAATGCAGTTCTAAGAGGAAACCTTCAACATCACAGAGGATTATTTGGAGGTTTTAAGGGTGTGATCGTATCAGTGCTGGATCTTGTGGAAAAATCAAAGTTAAAAGAGGAAATATAGAGGTTCTCTTACAGTGAAAATAGGGTTTTCAAGGGTGCTGGCCCAATAACAATGTCCTTGGTTCCTTATAGAGCTACATGGCTATTATGGAGCCATTTCAGTGAATTTTTGTTGACAGATGCACCTTATTGTTCATTGAGTTCAATATGCTACGGAAACCTTTTATTTTCATTTACAACGCAGAGAAGAAAGTTTCTCGGTCGTCCAAAGTTCCCTGAAAAAATAAGAAATGGAAAATGGTTGATTAAACTTCTTTTAGGAACATTACAATTTGAGTATTATGATGGGTTAACTTTGAACCTGATGTGTTGAGTGGAAACTTGAAGCTGAAACCAAACAAGAAAAAGAGGTTTTGGTCGTGAACGGTTTATAGGAAATGATTCAAGAAGTAATAAGGAGATGGTTGGGCCTAAAGGGTTTTGTTTGAACCCTGATTTTGTTGAATGTCAACACCGACATAATTTTTGCTTGGCTCCAATTTTTAAATCACAAATGATAGCCAGCGCTCTGTGAGTGAACAATCTTTTCCCTTAATGATGACAAAAGACTCTTTTGTGCTTTTTTGGGTAACAATATTGTTGAATGAAGATTTGAACTGGAATACACATTTGAGGGATGGAGCTCAATGCAGTTTGGGTAATATAATCCTTACGTAAGAGTCATCCTACTCAACTTTCAGGCATTATGGGTTACAAACTGTTTGAAATTTAATCTCGTTATTGTGGTTGTACGAGAAATACAATTTAGAGAAGTTGATGGAAGATTTGTTGAATCTTCATGGTGTTCCAAGAACATTGCAACAAATGACTTCTTCCGGTGCCATTGCTATTGGGGCATTTTGGTTTTATTCAGCAACTATTGTTTATGTTTTGGTAGGTTAGCGTGATCGTAACTGGGTCTTGGGAGTAATCTCTTTGTGGTAAGATCATCAAGAGAACAATTTTGAATGGTCATAGATTTATTTCTAGCATGAAGAATTATCTCTTTTTGACCCTCCCAAAAAGTCCTTTTACATGGTCTAACATAAGAGAAATCCCATCTTTCTTGTTTTGTTAAATTTTCTTTCCTATGCTATGTTGTAAAAAATCTTAAATTCATTCAAGTGAGATCAAAGGAATAGGAGCACCACCTGACTATCATCTAATTTTCTTTGAAGTTAGCAATTTGGACAGTTTTACTCCTTTTTATTTTGATGATTCCGGTAGATTCATGTTAGGTAACCAATATTTCTGCTCTCAGAAAAAATACCCGAGAAGAGATAAACAGGGGAAAACACACCGTGATCTTGATATATTCCAATATGGAAATACTATCTCAAGCCAAAGTCTCAAGAACAAGAACACTAAAAGACCAGAGAACAAAGAAAATATAAGGGCTGATATGAGAGCACCTCCTCTCCAAGAAAGCTTACTCCAAATCACCAATTCCTCTCCACAAAACCCTACATAAACCACCAACGTAAACTCTCCTCCTACATTCTTCATGATCCCTTGACAGGAAGCTGCAGAACCCATACACTCCCTTTCCACTAACGGTTTGCTGCACCTCCAGTTACCTTCTTGCCCCTCCTTTCAAATGTATGAATTATCAGGAGTCTTATGTTTCATTATGAGTTCCTTCGTGTCAAAATGAAAGTAGCTCTACAACGCTAATAAAAATGAATTGCTGGAGATTGTCCTCAAGGGTTTATGTTATGGAAAACAAAGTGCCAGCCAAAGTGGCAAAGAAGTGTGAGGATGAGGAAAGTGATAGAACACTAAGAAGTTGTGTTTGTATTATATTGATATGAACTTCAACAATTACAATATAGAATTGATGATCTCAATTCTGGAAATAAAATGCAGAAATTAAGAACAATGCAGAAAAACAAAGAACAAAGATGAATGAAACTTCCCTCTCTGCCTTTCCTTTCTCTCAAGTGCAGAAATCACTCACAAAATGATCGTCCCTTCTCTCTAAATTCCCTCTCATTTAACCACTTCTTCCTTGTAACTAACTATGGACCCCACCATTGTGGTCTTTCTCCTAATGCTCACCCCCTCATTTGCACGTGTGTTTTCCTTCTTCTTCCTCCTACTATATTGTAATACAATTGGAGGTCTATCATTATGCTCCTCCAAACTCACCTTGTCCTCAAGGTGGAAATTAGGAAATTGTTGTTTAAAATCATTACAGTTCTCCCACGTAGCTTCATGTGGTGGTAGGCCTTTCCAACTGATTAGCATTTCCCATTCCCCGAGTTGAAGAATTCTTGTTGTACCTGAATACTTCTTTTGGTGTTGCCATCCATTCATGGTTTTCATTCACGAAAGGACTCAATTGGTTCACCTCAGTATGATCTCCTAGCATCTTTTGAGTTGGGATACATGGAATACTGGGTGAATGGATGCTGTGGTCGGTAATTCCAACTTATAAGCAACAGGACCTATTCTTTCGATCACCCTGTAAGGTTCGAAAAATTTTGGTGACAATTTTTTGTTTCTTCTCTTTCTAAATGAGACCCCACGATAGGGTCTATTTTTTAGAAATACAAGCTCCCCACTTGGAATTCAACATGTTTTCTCTTCATGTCTGCATACTTCATCTTTTCTTGGGCAATTTTAAGGTGTTCCTTCAATGTTTCCAAAATCACATCTCTTTCCTTTAACTGTCGATCAAGTATCGAATTGGGTGTCTCCATATCACCATAATATATTAATGGTGGTGGTAACTGTCCATAAACGGCTTGGAATGGGGTTATCCCAATTGATCTTTGGTATGTGGTGTTATACCGGTATTCGGCCTAGGGGAGCCAATTTACTCATTCCTTCGGCTTCTGCCCACAAAAACACCTCAGATATGCTTCCACTCCTTGGTTAACCACTTCTGTTTGGCCGTCAGACTGTGGGTGGTATGTCGAGCTTCTATTCAGCCCATTCCAGATAGACAAAACATCTCCTTCCAAATGTTACTAAGGAACACTTTATCACGATCTAAAACTATAGACTTTGGGTATCCATGTAATCTTACTATCTCTTTTACATAAATTTCAGCGACTGACTTAGCAGTATATGGATGTTTCAAAGCTAAAAAGTGGGTATACTTACTCATTCTACCACTACCAAAAATTAAGAACAATGCAGAAAAACAAAGAACAAAGATGAATGAAACTTTCCTCTCCATCTTTCCTTTCTCTTAAGGAAACATGCAGAAATCACACACAAAATGATCCTCCCTTCTCCCTTCCGAATTCCCTCTCATTTAATGACTTCTTCCTTGTAACTAACTGTGGACCTCACCATTGTGGTCCTCTCTCCTAATGCTCACCCCCTCGTTGGCACATGTGTTTTCCTTCTTCTTCCTCCTACTATATTGTAATACAATTGGTGGTCTATCAGAAAGCTGCTAAATTCTGTCACAACAACTTGGTTACAAATAAGAATGGTTTCCTTTTGGAAATTCATTTGGAGTATGGAAGTTGTTTGGCCATTGTTTAGCAAGTAGCAGGGAAATCAATTTTTCTGTCTACAAAATGGAATTTCTTTGTTTTATTACCAAAGGGTCATAATTTAGTTCAATTTTTTCACCATTGGATGTTGATTGGCTGTAGCGTGTCATATTGATATTTTGGGAACATTTGAACAGCTAACATGCTTTGAACAAGGAATGGAGCTTGGTGGAACTTCAATGAGCTTCATCTTATATTGCCGTCATTGAGTTTGGTTTGAAGAAGGGAGAGAACTTCAATGAGCTTCATCCCACCAATGAGTTTGTTTGAATAAGAGATGGAACTTTCCGAATGTGGATTTTTTTGTTTTGTTCAACAACTTATGGATAATGGTATTGGTTTTTTGATACAGAGACAAGCTTAGGTATTATAAACTCTAACATCAATCTATCTTCTTTTTCTCTTTAATTCCTAAAGATTTGATGCCAAATGTTTGAATTGAAACCAATTTTGGGCCCCTTTTGCAGAAATTTTGGCTAGTAGGCCTTTTTTGGTTGGTAATTTCCGGCTACTTTTGATGTCAGTCTGAGCTGAAGCAGCTCTGATCGTAAAAAGATCCCCCCAAGCATACCTTGGCTTCAAGTGTTGCTTCTTGTTTAAGAAAAATGTGGAATGGAAGATTCAGACCATATATTCTTGACTTACCGTGACATTTTATCTTTATCTGGACTGAAGGAGGTTTTGTAACACTTTCAACTGCAAGATCATGTGAAAGATTCGTAATGAAAATGTCCATGTAGAAATAGCCATCAATTGGTTGAGGCATTATAATCTTAACCAGCAGGTGATAGCCTGATAGGTTCGAATTCTACCCAATATATTATTAAACAGTTTCTTTTTTCTTTGTTTTAGTACAAAAGGGGTGGAAGTACGTGGGTTTGAACTTCTGACCTTGAGAGGAGTGCATATTTAATTATGTGGCTTGTTTTTGTGATTTTCATGCTAGCTACCCTTTTGGGAGTTAGGTGGGAGAATCTTCAAAGATGAGTGATCGGGATTTAGGTGAAATGAATAGGAAGAAATTTTTTTGAAGATGATTGTATTTCATTATTGTTTCTCTTTTTGTGCCTCGCCAGTTCTTTCTATAATTATTCTTTCTTTTGTATTTATGGTTCAACCTAATAAGACATGCATGTATATAATTTCTTTGGCAACTCAGTTACACTCCCTCTCCCTTTCTATTGGTTTCTTTCATCAATGTAAAAACTGCAAATCTGTCTCGCATTTATATAAAGACATTTCCAATAATATCTGTTTGCCTAACCATTTAACAGAAGAAACTACTGCAAACCACAAGACCAAATTCGATCTCGCATTGCATTGGAAAACTGAAGAACGGAAACTCTGGACAATGAACTACTTCTGTAAGCAGTATGTTTCTCAGATTAAAGATTTGTAGTTACATTACCATTTCGTTTCTTACTGTTGTGTGAACCTTCTTCTTTCCTACGAGGCATTTTATCTCCACAAGTGTTGTTGTGATGTTAAAAATGCATAATAAACATATTCAGAAAGGTTCTATCCATCAGTTCATATCTCTGGAAGTCAGAAGAGATCTAACTTTATTCTAAACTAAATCTTCTTAATATTCTTTTATAGATTATGTTTTTCATAATTTAATGATACTTGAG

mRNA sequence

CCGAGAGTTCTTCTCCTTGTGCTTAAACCCTATTTCACGTTAAGCCACCCCGCCCTCCCATTACATGGTACTCCGCCCCACCGCACGCCGTTCCTATCCAGATAGTTCCTGAATCTTTGTAATTTGTAGCAGCTTCAAGCTTAAAAGGGTTTAGGGTTTTCAATCGCTTGCCCAAGATGAAGCAAGTAGTGGGTATGGTGGTTTCAAACAAAATGCAGAAATCAGTTGTCGTTGCAGTGGACAGATTGTTTTATCACAAACTCTATAATCGCTACGTTAAACGCACTTCCAAGTTCATGGCTCATGACGAGAACAACCAGTGCAATATTGGTGACAGGGTTAAATTAGATCCTTCTAGGCCATTGAGCAAGCGTAAACATTGGGTGGTTGCTGAAATTTTGAGGAAAGCACGAATTTACGAGCCACCATCACAAGATAACCAAACTGTTTCAGACAAAAGCAATGTTTCAGCTCCTTCAACCACTTAAGAAGAAACTACTGCAAACCACAAGACCAAATTCGATCTCGCATTGCATTGGAAAACTGAAGAACGGAAACTCTGGACAATGAACTACTTCTGTAAGCAGTATGTTTCTCAGATTAAAGATTTGTAGTTACATTACCATTTCGTTTCTTACTGTTGTGTGAACCTTCTTCTTTCCTACGAGGCATTTTATCTCCACAAGTGTTGTTGTGATGTTAAAAATGCATAATAAACATATTCAGAAAGGTTCTATCCATCAGTTCATATCTCTGGAAGTCAGAAGAGATCTAACTTTATTCTAAACTAAATCTTCTTAATATTCTTTTATAGATTATGTTTTTCATAATTTAATGATACTTGAG

Coding sequence (CDS)

ATGAAGCAAGTAGTGGGTATGGTGGTTTCAAACAAAATGCAGAAATCAGTTGTCGTTGCAGTGGACAGATTGTTTTATCACAAACTCTATAATCGCTACGTTAAACGCACTTCCAAGTTCATGGCTCATGACGAGAACAACCAGTGCAATATTGGTGACAGGGTTAAATTAGATCCTTCTAGGCCATTGAGCAAGCGTAAACATTGGGTGGTTGCTGAAATTTTGAGGAAAGCACGAATTTACGAGCCACCATCACAAGATAACCAAACTGTTTCAGACAAAAGCAATGTTTCAGCTCCTTCAACCACTTAA

Protein sequence

MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPSRPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT
Homology
[Close]
BLAST of IVF0008264 vs. ExPASy Swiss-Prot
Match: A7HM43 (30S ribosomal protein S17 OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) OX=381764 GN=rpsQ PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 4.4e-20
Identity = 46/83 (55.42%), Postives = 62/83 (74.70%), Query Frame = 0 

Query: 2  KQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPSR 61
          K++VG+VVS+KM K+V V V+RL  H  + +YVKRT KF AHDENN C +GD V+++ SR
Sbjct: 4  KRLVGVVVSDKMDKTVTVKVERLVKHAKFGKYVKRTKKFYAHDENNACRVGDVVEIEESR 63

Query: 62 PLSKRKHWVVAEILRKARIYEPP 85
          PLSK K WVV  IL ++++ E P
Sbjct: 64 PLSKLKRWVVVNILERSKLSETP 86

[Close]
BLAST of IVF0008264 vs. ExPASy Swiss-Prot
Match: B1I1J7 (30S ribosomal protein S17 OS=Desulforudis audaxviator (strain MP104C) OX=477974 GN=rpsQ PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 5.7e-20
Identity = 47/75 (62.67%), Postives = 59/75 (78.67%), Query Frame = 0 

Query: 6  GMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPSRPLSK 65
          G VVS+KM K+VVVAVD L  H LY R V+RT KFMAHDE+NQC IGD+VK+  +RPLS+
Sbjct: 11 GRVVSDKMDKTVVVAVDTLVKHPLYGRTVRRTRKFMAHDEDNQCRIGDKVKIAETRPLSR 70

Query: 66 RKHWVVAEILRKARI 81
           K W VAE+L +++I
Sbjct: 71 HKRWRVAEVLERSQI 85

[Close]
BLAST of IVF0008264 vs. ExPASy Swiss-Prot
Match: Q6LVA7 (30S ribosomal protein S17 OS=Photobacterium profundum (strain SS9) OX=298386 GN=rpsQ PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 8.3e-19
Identity = 40/76 (52.63%), Postives = 58/76 (76.32%), Query Frame = 0 

Query: 5  VGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPSRPLS 64
          +G V+S+KM KS+VVA++R+  H +Y +Y+KRT+K  AHDENN+CN+GD V++   RPLS
Sbjct: 9  LGRVISSKMDKSIVVAIERMVKHPMYGKYIKRTTKLHAHDENNECNLGDTVEVRECRPLS 68

Query: 65 KRKHWVVAEILRKARI 81
          K K W +  I+ KAR+
Sbjct: 69 KTKSWTLVRIVEKARV 84

[Close]
BLAST of IVF0008264 vs. ExPASy Swiss-Prot
Match: Q1LTC9 (30S ribosomal protein S17 OS=Baumannia cicadellinicola subsp. Homalodisca coagulata OX=374463 GN=rpsQ PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-18
Identity = 40/73 (54.79%), Postives = 55/73 (75.34%), Query Frame = 0 

Query: 6  GMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPSRPLSK 65
          G VVSNKM KS+VVA++R+  H +Y +Y+KRT+K  AHDENN CNIGD +++   RP+SK
Sbjct: 15 GRVVSNKMDKSIVVAIERIIKHPIYGKYIKRTTKIHAHDENNACNIGDLIEIKECRPISK 74

Query: 66 RKHWVVAEILRKA 79
           K W++  I+ KA
Sbjct: 75 TKSWILIRIIEKA 87

[Close]
BLAST of IVF0008264 vs. ExPASy Swiss-Prot
Match: Q8R7W3 (30S ribosomal protein S17 OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=rpsQ PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.4e-18
Identity = 43/74 (58.11%), Postives = 56/74 (75.68%), Query Frame = 0 

Query: 5  VGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPSRPLS 64
          +G VVSNKMQK++VVAV+  F H LY + VKRT K+  HDENN CN+GD VK+  +RPLS
Sbjct: 10 IGTVVSNKMQKTIVVAVEDKFRHPLYGKIVKRTKKYKVHDENNICNVGDVVKIMETRPLS 69

Query: 65 KRKHWVVAEILRKA 79
          K K W + E+++KA
Sbjct: 70 KEKRWRLVEVIKKA 83

[Close]
BLAST of IVF0008264 vs. ExPASy TrEMBL
Match: A0A5D3D9X1 (30S ribosomal protein S17, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold228G00680 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.7e-49
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
           MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS
Sbjct: 51  MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 110

Query: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 104
           RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT
Sbjct: 111 RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 153

[Close]
BLAST of IVF0008264 vs. ExPASy TrEMBL
Match: A0A5A7TD01 (30S ribosomal protein S17, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G002330 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.7e-49
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
           MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS
Sbjct: 51  MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 110

Query: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 104
           RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT
Sbjct: 111 RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 153

[Close]
BLAST of IVF0008264 vs. ExPASy TrEMBL
Match: A0A1S4E5I9 (30S ribosomal protein S17, chloroplastic OS=Cucumis melo OX=3656 GN=LOC107992092 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.7e-49
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
           MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS
Sbjct: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60

Query: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 104
           RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT
Sbjct: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 103

[Close]
BLAST of IVF0008264 vs. ExPASy TrEMBL
Match: A0A6J1JP01 (30S ribosomal protein S17, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486195 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.4e-45
Identity = 97/103 (94.17%), Postives = 98/103 (95.15%), Query Frame = 0 

Query: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
           MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS
Sbjct: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60

Query: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 104
           RPLSK K WVVAEILRKARIYEPPSQ+NQ VSDK  VSAPSTT
Sbjct: 61  RPLSKHKRWVVAEILRKARIYEPPSQENQVVSDKGKVSAPSTT 103

[Close]
BLAST of IVF0008264 vs. ExPASy TrEMBL
Match: A0A6J1FRT9 (30S ribosomal protein S17, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447872 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.1e-45
Identity = 96/103 (93.20%), Postives = 98/103 (95.15%), Query Frame = 0 

Query: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
           MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS
Sbjct: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60

Query: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 104
           RPLSK K WVVAEILRKARIY+PPSQ+NQ VSDK  VSAPSTT
Sbjct: 61  RPLSKHKRWVVAEILRKARIYQPPSQENQVVSDKGKVSAPSTT 103

[Close]
BLAST of IVF0008264 vs. NCBI nr
Match: XP_016903240.1 (PREDICTED: 30S ribosomal protein S17-like [Cucumis melo])

HSP 1 Score: 204 bits (518), Expect = 5.33e-66
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
           MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS
Sbjct: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60

Query: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 103
           RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT
Sbjct: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 103

[Close]
BLAST of IVF0008264 vs. NCBI nr
Match: KAA0041013.1 (30S ribosomal protein S17-like [Cucumis melo var. makuwa])

HSP 1 Score: 204 bits (518), Expect = 2.70e-65
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
           MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS
Sbjct: 51  MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 110

Query: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 103
           RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT
Sbjct: 111 RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 153

[Close]
BLAST of IVF0008264 vs. NCBI nr
Match: TYK20371.1 (30S ribosomal protein S17-like [Cucumis melo var. makuwa])

HSP 1 Score: 204 bits (518), Expect = 2.70e-65
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
           MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS
Sbjct: 51  MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 110

Query: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 103
           RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT
Sbjct: 111 RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 153

[Close]
BLAST of IVF0008264 vs. NCBI nr
Match: XP_004137152.1 (uncharacterized protein LOC101211400 [Cucumis sativus] >XP_011653397.1 uncharacterized protein LOC101211400 [Cucumis sativus])

HSP 1 Score: 198 bits (503), Expect = 1.04e-63
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0 

Query: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
           MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS
Sbjct: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60

Query: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 103
           RPLSK KHWVVAEILRKARIYEPPSQD Q+VSDKSNVSAPSTT
Sbjct: 61  RPLSKHKHWVVAEILRKARIYEPPSQDKQSVSDKSNVSAPSTT 103

[Close]
BLAST of IVF0008264 vs. NCBI nr
Match: KAE8649314.1 (hypothetical protein Csa_015070 [Cucumis sativus])

HSP 1 Score: 198 bits (503), Expect = 4.44e-63
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0 

Query: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
           MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS
Sbjct: 46  MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 105

Query: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 103
           RPLSK KHWVVAEILRKARIYEPPSQD Q+VSDKSNVSAPSTT
Sbjct: 106 RPLSKHKHWVVAEILRKARIYEPPSQDKQSVSDKSNVSAPSTT 148

[Close]
BLAST of IVF0008264 vs. TAIR 10
Match: AT1G49400.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 145.2 bits (365), Expect = 2.9e-35
Identity = 74/103 (71.84%), Postives = 87/103 (84.47%), Query Frame = 0 

Query: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
           MK V+G VVSNKMQKSVVVAVDRLF++K+YNRYVKRTSKFMAHD+ + CNIGDRVKLDPS
Sbjct: 1   MKPVIGTVVSNKMQKSVVVAVDRLFHNKIYNRYVKRTSKFMAHDDKDACNIGDRVKLDPS 60

Query: 61  RPLSKRKHWVVAEILRKARIYEPPSQDNQTVSDKSNVSAPSTT 104
           RPLSK KHW+VAEI++KARIY P +     VS  ++ S+ STT
Sbjct: 61  RPLSKNKHWIVAEIIKKARIYSPKAA-AAAVSASASASSASTT 102

[Close]
BLAST of IVF0008264 vs. TAIR 10
Match: AT3G18880.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 140.2 bits (352), Expect = 9.3e-34
Identity = 66/83 (79.52%), Postives = 75/83 (90.36%), Query Frame = 0 

Query: 1  MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
          MK V+G VVSNKMQ SVVVAVDRLF++ +YNRYVKRTSKFMAHDE + CNIGDRVKLDPS
Sbjct: 1  MKAVIGTVVSNKMQMSVVVAVDRLFHNNIYNRYVKRTSKFMAHDEKDSCNIGDRVKLDPS 60

Query: 61 RPLSKRKHWVVAEILRKARIYEP 84
          RPLSK KHW+V+EI++KARIY P
Sbjct: 61 RPLSKHKHWIVSEIIKKARIYSP 83

[Close]
BLAST of IVF0008264 vs. TAIR 10
Match: AT1G79850.1 (ribosomal protein S17 )

HSP 1 Score: 61.2 bits (147), Expect = 5.5e-10
Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 0 

Query: 1   MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAHDENNQCNIGDRVKLDPS 60
           MK + G VV     K+V V V RL  H  Y R V+   K+ AHD +NQ  +GD V+L+ S
Sbjct: 50  MKTMQGRVVCATSDKTVAVEVVRLAPHPKYKRRVRMKKKYQAHDPDNQFKVGDVVRLEKS 109

Query: 61  RPLSKRKHWVVAEILRKA 79
           RP+SK K +V   ++ +A
Sbjct: 110 RPISKTKSFVALPVIARA 127

[Close]
BLAST of IVF0008264 vs. TAIR 10
Match: AT4G30800.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 42.7 bits (99), Expect = 2.0e-04
Identity = 27/71 (38.03%), Postives = 38/71 (53.52%), Query Frame = 0 

Query: 6   GMVVSNKMQKSVVVAVDRLFYHKLYNRYVKRTSKFMAH-DENNQCNIGDRVKLDPSRPLS 65
           G   S KMQ++++V  D L + K Y RY KR S   AH     +   GDRV +   RPLS
Sbjct: 74  GTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPAHVSPCFRVKEGDRVTIGQCRPLS 133

Query: 66  KRKHWVVAEIL 76
           K   + V +++
Sbjct: 134 KTVRFNVLKVI 144

The following BLAST results are available for this feature:
BLAST of IVF0008264 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A7HM434.4e-2055.4230S ribosomal protein S17 OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5... [more]
B1I1J75.7e-2062.6730S ribosomal protein S17 OS=Desulforudis audaxviator (strain MP104C) OX=477974 ... [more]
Q6LVA78.3e-1952.6330S ribosomal protein S17 OS=Photobacterium profundum (strain SS9) OX=298386 GN=... [more]
Q1LTC91.1e-1854.7930S ribosomal protein S17 OS=Baumannia cicadellinicola subsp. Homalodisca coagul... [more]
Q8R7W31.4e-1858.1130S ribosomal protein S17 OS=Caldanaerobacter subterraneus subsp. tengcongensis ... [more]
BLAST of IVF0008264 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D9X12.7e-49100.0030S ribosomal protein S17, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7TD012.7e-49100.0030S ribosomal protein S17, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A1S4E5I92.7e-49100.0030S ribosomal protein S17, chloroplastic OS=Cucumis melo OX=3656 GN=LOC107992092... [more]
A0A6J1JP011.4e-4594.1730S ribosomal protein S17, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11148... [more]
A0A6J1FRT93.1e-4593.2030S ribosomal protein S17, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
BLAST of IVF0008264 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016903240.15.33e-66100.00PREDICTED: 30S ribosomal protein S17-like [Cucumis melo][more]
KAA0041013.12.70e-65100.0030S ribosomal protein S17-like [Cucumis melo var. makuwa][more]
TYK20371.12.70e-65100.0030S ribosomal protein S17-like [Cucumis melo var. makuwa][more]
XP_004137152.11.04e-6397.09uncharacterized protein LOC101211400 [Cucumis sativus] >XP_011653397.1 uncharact... [more]
KAE8649314.14.44e-6397.09hypothetical protein Csa_015070 [Cucumis sativus][more]
BLAST of IVF0008264 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G49400.12.9e-3571.84Nucleic acid-binding, OB-fold-like protein [more]
AT3G18880.19.3e-3479.52Nucleic acid-binding, OB-fold-like protein [more]
AT1G79850.15.5e-1042.31ribosomal protein S17 [more]
AT4G30800.12.0e-0438.03Nucleic acid-binding, OB-fold-like protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000266Ribosomal protein S17/S11PRINTSPR00973RIBOSOMALS17coord: 52..62
score: 49.27
coord: 62..69
score: 61.5
coord: 20..43
score: 37.58
IPR000266Ribosomal protein S17/S11PFAMPF00366Ribosomal_S17coord: 6..73
e-value: 1.5E-32
score: 111.5
IPR000266Ribosomal protein S17/S11PANTHERPTHR1074440S RIBOSOMAL PROTEIN S11 FAMILY MEMBERcoord: 1..94
NoneNo IPR availableGENE3D2.40.50.140coord: 1..99
e-value: 2.1E-34
score: 119.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..103
NoneNo IPR availablePANTHERPTHR10744:SF137S RIBOSOMAL PROTEIN S17, MITOCHONDRIALcoord: 1..94
IPR01998430S ribosomal protein S17TIGRFAMTIGR03635TIGR03635coord: 2..71
e-value: 3.9E-31
score: 104.9
IPR01998430S ribosomal protein S17HAMAPMF_01345_BRibosomal_S17_Bcoord: 1..76
score: 22.205238
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 2..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0008264.1IVF0008264.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome