IVF0008227 (gene) Melon (IVF77) v1

Overview
NameIVF0008227
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTranscription and mRNA export factor ENY2
Locationchr03: 21743429 .. 21746228 (-)
RNA-Seq ExpressionIVF0008227
SyntenyIVF0008227
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCGTCTCCAGTCAGCTGTTCCTCGCGGTGTAGTTGGACGCGCTGTGTCGCCGTGAAAGTGAAATTTTTTCAACAACAATCTCTAACCATAATCTTTGATAATTGAATGTAAGTCTCTCCTAAGTCAGATTTCTGGTCGTCTTTCATCAGATCATCACTTTACCAAATTGAAATTTTCGCATCGATGGGGCTAATTCTTCAAGCTTCAATCCATGGCTATAATCGCCATGCCCTAATTTCTGCTACGACAGGAGGGCTTCTATTAATCGGCCTCCGACGCCTGAACCGGAGGATGATCGAGAACACCAACCCACTTTTCAAGAATCAATCAACATCAAGGTCTGCAGTTTATTCGGTTCGTCTGTCTTTTTTTCTTTATGATTTTGATTGGATTTCTTTCTGGACAGCTGATTGAAAGTGGTGAGAAAGAGCGGCTGAAAGAGCTCTTGAGAGAGAGGCTCATTGAATGCGGCTGGAAAGATGAGATGAAAGCACTCTGCAGGTTCCACTCTCCTATATATTCATTCAATTTATGTATCGATTTCTTGTTTCTATTGTTTTTCAAGAATGTTTGATCATTTCCTGTACCGTATCAGTCACTAATTAACGAGTAATTGCTGAAAGAAAAACGCTATAGTGTGGCTTGATGTGTAAAGGTTGCTTTGAAATTAATTCAAACGGAAAATTAGAACTGATGTAGTTCTAGTTTTGTCTAAGGGTATTCCATTAACAGTCCTGGAAGTGGAGATTTGCTATATGATCATATCAATTCTTTCATTCCAAGGCTAAGACTTTTGAATCTCCCTGTTGTTTCTCTAGGGCATATGTAAGGAAGAAAGGAAGGAACAATGTTAGTGTTGATGACCTCGTGCAGGTCATTACTCCAAAAGGCAGAGGTTCGTTCTCACTTTCCATTTTAGAATTGGTTGCTATTGGTTGCATTTATCATAAACTTCTGATATGTTATCATTTGATCGCTTTTGCTGGTGTAAGGATCCTTGATTTCCTACACCCTCTAACAATTGTTACATATGATGCAAGAAAACTTCATATTTATGAATCCTAGGAAGGCTTATAGTTTACGTACTTTTATGACACAAGGTGAGGTGCAACCAACTCTATCTGTATACAAACCCAGTTACATTCTGTCCTGCCTCTGTAAGCCTGTAAGATTCCTGTGCTCACCACATTCCTCACAGCTATTATCCCATATTTTTAAAGTACGGTGATTTAGAGTAATCAAATTAGAGGACTCCTGTGCCAATGTATGCGAGATCATCGGGGGATTTAGTGCAAGTCTAATCCCCTCAACTTTGTGTTCTTTATATATATCTATATTATATAAGTTGTAACTATACCAATACCAGTAGCTAACCCAGTGATAAAAATGTCATCTAGTCCCTCTAGACCCAGGTTCAAGTCACACTACTTACATTCTTTTTTCAAATTAATTTTACTGAACTACAAAGCCCCCGTAAAAAAAAATTCTGGATCCACAGCTGTATGAGATTATAGCTATCAGTCTAATATAAAAAGTCAACAACAATAGGAGCCTTTACATTGGAAGAATTCCTTTACATCAAATCAAATTATAAGGAGTCAAATCGGATGTTATGACTCCGAGAATGACTGATAATTAAAAATATATTAACTAAAACATTTTGCACAAAACAATAGACCAATAATATAACCGATGACTCAATGAGTTATGCTTGGTTGATAGAAAGTAGTCACGAATGATTCAAAGCTCATGCAAATTTCATTTCTTATAAATTGTTAAGGTGAATTCCTGTTATATATGCAGTCTGTATTCGTATGTGTGTCATTGTTGAGGAATATTCTGAATATGAGTCAGTAAGAACTTAGAAAAAACTCACTTTTACTCCTGGCGAAGTTTGATTTTCACACTCTTCCACAGAACCGGCTTAACACAATAGAGAAAGAATTGAAGTCATTAAGGGGTTTTGAGTTCTCATGAGGGACACTCCCAACAATTTAAACTTGCATCCATTATGTTACAACCCATTACGATTTTTTAAACTGCACCCAAAGAACCAACCACAAGAGGAGACTTCCATAGCCATTTTGCCAATTAAACCTCCGTAGTCCATTTTGTTCCGGTTGATTTTTGTGTTATTCACATTTGAAAAGTTTTCTTATGAAGGTGAATTGCTCACCACGT

mRNA sequence

GTCGTCTCCAGTCAGCTGTTCCTCGCGGTGTAGTTGGACGCGCTGTGTCGCCGTGAAAGTGAAATTTTTTCAACAACAATCTCTAACCATAATCTTTGATAATTGAATGAGGGCTTCTATTAATCGGCCTCCGACGCCTGAACCGGAGGATGATCGAGAACACCAACCCACTTTTCAAGAATCAATCAACATCAAGCTGATTGAAAGTGGTGAGAAAGAGCGGCTGAAAGAGCTCTTGAGAGAGAGGCTCATTGAATGCGGCTGGAAAGATGAGATGAAAGCACTCTGCAGGGCATATGTAAGGAAGAAAGGAAGGAACAATGTTAGTGTTGATGACCTCGTGCAGGTCATTACTCCAAAAGGCAGAGGTGAGGTGCAACCAACTCTATCTGTATACAAACCCAGTTACATTCTGTCCTGCCTCTGTAAGCCTGTAAGATTCCTGTGCTCACCACATTCCTCACAGCTATTATCCCATATTTTTAAAGTACGGTGATTTAGAGTAATCAAATTAGAGGACTCCTGTGCCAATGTATGCGAGATCATCGGGGGATTTAGTGCAAGTCTAATCCCCTCAACTTTGTGTTCTTTATATATATCTATATTATATAAGTTGTAACTATACCAATACCAGTAGCTAACCCAGTGATAAAAATGTCATCTAGTCCCTCTAGACCCAGGTTCAAGTCACACTACTTACATTCTTTTTTCAAATTAATTTTACTGAACTACAAAGCCCCCGTAAAAAAAAATTCTGGATCCACAGCTGTATGAGATTATAGCTATCAGTCTAATATAAAAAGTCAACAACAATAGGAGCCTTTACATTGGAAGAATTCCTTTACATCAAATCAAATTATAAGGAGTCAAATCGGATGTTATGACTCCGAGAATGACTGATAATTAAAAATATATTAACTAAAACATTTTGCACAAAACAATAGACCAATAATATAACCGATGACTCAATGAGTTATGCTTGGTTGATAGAAAGTAGTCACGAATGATTCAAAGCTCATGCAAATTTCATTTCTTATAAATTGTTAAGGTGAATTCCTGTTATATATGCAGTCTGTATTCGTATGTGTGTCATTGTTGAGGAATATTCTGAATATGAGTCAGTAAGAACTTAGAAAAAACTCACTTTTACTCCTGGCGAAGTTTGATTTTCACACTCTTCCACAGAACCGGCTTAACACAATAGAGAAAGAATTGAAGTCATTAAGGGGTTTTGAGTTCTCATGAGGGACACTCCCAACAATTTAAACTTGCATCCATTATGTTACAACCCATTACGATTTTTTAAACTGCACCCAAAGAACCAACCACAAGAGGAGACTTCCATAGCCATTTTGCCAATTAAACCTCCGTAGTCCATTTTGTTCCGGTTGATTTTTGTGTTATTCACATTTGAAAAGTTTTCTTATGAAGGTGAATTGCTCACCACGT

Coding sequence (CDS)

ATGAGGGCTTCTATTAATCGGCCTCCGACGCCTGAACCGGAGGATGATCGAGAACACCAACCCACTTTTCAAGAATCAATCAACATCAAGCTGATTGAAAGTGGTGAGAAAGAGCGGCTGAAAGAGCTCTTGAGAGAGAGGCTCATTGAATGCGGCTGGAAAGATGAGATGAAAGCACTCTGCAGGGCATATGTAAGGAAGAAAGGAAGGAACAATGTTAGTGTTGATGACCTCGTGCAGGTCATTACTCCAAAAGGCAGAGGTGAGGTGCAACCAACTCTATCTGTATACAAACCCAGTTACATTCTGTCCTGCCTCTGTAAGCCTGTAAGATTCCTGTGCTCACCACATTCCTCACAGCTATTATCCCATATTTTTAAAGTACGGTGA

Protein sequence

MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSVYKPSYILSCLCKPVRFLCSPHSSQLLSHIFKVR
Homology
[Close]
BLAST of IVF0008227 vs. ExPASy Swiss-Prot
Match: Q6NQ54 (Transcription and mRNA export factor ENY2 OS=Arabidopsis thaliana OX=3702 GN=ENY2 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.7e-25
Identity = 54/94 (57.45%), Postives = 74/94 (78.72%), Query Frame = 0 

Query: 1  MRASINRPPTPEPED----DREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDE 60
          M+ S+NRPPTP+ +D      + + T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDE
Sbjct: 1  MKHSVNRPPTPDEDDVADGFEKDKVTLREIINVKLVESGEKENLMELVRDRLVECGWKDE 60

Query: 61 MKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEV 91
          M+  CR +V+KKGR +V+VD+L++VITPKGR  V
Sbjct: 61 MRIACREHVKKKGRKDVTVDELIRVITPKGRASV 94

[Close]
BLAST of IVF0008227 vs. ExPASy Swiss-Prot
Match: Q3ZBJ0 (Transcription and mRNA export factor ENY2 OS=Bos taurus OX=9913 GN=ENY2 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.5e-17
Identity = 47/94 (50.00%), Postives = 64/94 (68.09%), Query Frame = 0 

Query: 26  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPK 85
           +IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPK
Sbjct: 15  AINQKLIETGERERLKELLRAKLIECGWKDQLKAHCKEVIKEKGLEHVTVDDLVAEITPK 74

Query: 86  GRGEVQPTLSVYKPSYILSCLCKPVRFLCSPHSS 120
           GR  V        P  +   L + +R   + H+S
Sbjct: 75  GRALV--------PDSVKKELLQRIRTFLAQHAS 100

[Close]
BLAST of IVF0008227 vs. ExPASy Swiss-Prot
Match: Q6DH42 (Transcription and mRNA export factor ENY2 OS=Danio rerio OX=7955 GN=eny2 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.5e-17
Identity = 46/94 (48.94%), Postives = 64/94 (68.09%), Query Frame = 0 

Query: 26  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPK 85
           +IN KLIE GE+ERLKELLR +LIECGW+D++KALC+  +++KG  NV+V+DLV  +TPK
Sbjct: 10  AINQKLIEMGERERLKELLRAKLIECGWRDQLKALCKEVIKEKGIENVTVEDLVAGVTPK 69

Query: 86  GRGEVQPTLSVYKPSYILSCLCKPVRFLCSPHSS 120
           GR  V        P  +   L + +R   + HS+
Sbjct: 70  GRALV--------PDSVKKELLQRIRAFLAQHST 95

[Close]
BLAST of IVF0008227 vs. ExPASy Swiss-Prot
Match: Q9NPA8 (Transcription and mRNA export factor ENY2 OS=Homo sapiens OX=9606 GN=ENY2 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.5e-17
Identity = 47/94 (50.00%), Postives = 64/94 (68.09%), Query Frame = 0 

Query: 26  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPK 85
           +IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPK
Sbjct: 15  AINQKLIETGERERLKELLRAKLIECGWKDQLKAHCKEVIKEKGLEHVTVDDLVAEITPK 74

Query: 86  GRGEVQPTLSVYKPSYILSCLCKPVRFLCSPHSS 120
           GR  V        P  +   L + +R   + H+S
Sbjct: 75  GRALV--------PDSVKKELLQRIRTFLAQHAS 100

[Close]
BLAST of IVF0008227 vs. ExPASy Swiss-Prot
Match: Q9JIX0 (Transcription and mRNA export factor ENY2 OS=Mus musculus OX=10090 GN=Eny2 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.5e-17
Identity = 47/94 (50.00%), Postives = 64/94 (68.09%), Query Frame = 0 

Query: 26  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPK 85
           +IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPK
Sbjct: 15  AINQKLIETGERERLKELLRAKLIECGWKDQLKAHCKEVIKEKGLEHVTVDDLVAEITPK 74

Query: 86  GRGEVQPTLSVYKPSYILSCLCKPVRFLCSPHSS 120
           GR  V        P  +   L + +R   + H+S
Sbjct: 75  GRALV--------PDSVKKELLQRIRTFLAQHAS 100

[Close]
BLAST of IVF0008227 vs. ExPASy TrEMBL
Match: A0A1S4DVB5 (Transcription and mRNA export factor ENY2 OS=Cucumis melo OX=3656 GN=LOC103488502 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 6.9e-66
Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 0 

Query: 1   MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60
           MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL
Sbjct: 1   MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60

Query: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSVYKPSYILSCLCKPVRFLCSPHSSQ 120
           CRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSVYKPSYILSCLCKPVRFLCSPHSSQ
Sbjct: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSVYKPSYILSCLCKPVRFLCSPHSSQ 120

Query: 121 LLSHIFKVR 130
           LLS IFKVR
Sbjct: 121 LLSRIFKVR 129

[Close]
BLAST of IVF0008227 vs. ExPASy TrEMBL
Match: A0A0A0KIM7 (Transcription and mRNA export factor ENY2 OS=Cucumis sativus OX=3659 GN=Csa_6G365120 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.0e-41
Identity = 88/90 (97.78%), Postives = 88/90 (97.78%), Query Frame = 0 

Query: 1  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60
          MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL
Sbjct: 1  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60

Query: 61 CRAYVRKKGRNNVSVDDLVQVITPKGRGEV 91
          CRAYVRKKGRNNVSVDDLVQVITPKGR  V
Sbjct: 61 CRAYVRKKGRNNVSVDDLVQVITPKGRASV 90

[Close]
BLAST of IVF0008227 vs. ExPASy TrEMBL
Match: A0A1S3BDR5 (Transcription and mRNA export factor ENY2 OS=Cucumis melo OX=3656 GN=LOC103488502 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.0e-41
Identity = 88/90 (97.78%), Postives = 88/90 (97.78%), Query Frame = 0 

Query: 1  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60
          MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL
Sbjct: 1  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60

Query: 61 CRAYVRKKGRNNVSVDDLVQVITPKGRGEV 91
          CRAYVRKKGRNNVSVDDLVQVITPKGR  V
Sbjct: 61 CRAYVRKKGRNNVSVDDLVQVITPKGRASV 90

[Close]
BLAST of IVF0008227 vs. ExPASy TrEMBL
Match: A0A6J1KQ41 (Transcription and mRNA export factor ENY2 OS=Cucurbita maxima OX=3661 GN=LOC111496587 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.1e-39
Identity = 85/90 (94.44%), Postives = 86/90 (95.56%), Query Frame = 0 

Query: 1  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60
          MR SINRPPTPEPEDDRE QPTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKAL
Sbjct: 1  MRTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60

Query: 61 CRAYVRKKGRNNVSVDDLVQVITPKGRGEV 91
          CRAYVRKKGRNNVSVDDLVQVITPKGR  V
Sbjct: 61 CRAYVRKKGRNNVSVDDLVQVITPKGRASV 90

[Close]
BLAST of IVF0008227 vs. ExPASy TrEMBL
Match: A0A6J1GGQ4 (Transcription and mRNA export factor ENY2 OS=Cucurbita moschata OX=3662 GN=LOC111454046 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.1e-39
Identity = 85/90 (94.44%), Postives = 86/90 (95.56%), Query Frame = 0 

Query: 1  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60
          MR SINRPPTPEPEDDRE QPTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKAL
Sbjct: 1  MRTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60

Query: 61 CRAYVRKKGRNNVSVDDLVQVITPKGRGEV 91
          CRAYVRKKGRNNVSVDDLVQVITPKGR  V
Sbjct: 61 CRAYVRKKGRNNVSVDDLVQVITPKGRASV 90

[Close]
BLAST of IVF0008227 vs. NCBI nr
Match: XP_016899913.1 (PREDICTED: transcription and mRNA export factor SUS1 isoform X1 [Cucumis melo])

HSP 1 Score: 257 bits (657), Expect = 2.28e-86
Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 0 

Query: 1   MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60
           MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL
Sbjct: 1   MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60

Query: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSVYKPSYILSCLCKPVRFLCSPHSSQ 120
           CRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSVYKPSYILSCLCKPVRFLCSPHSSQ
Sbjct: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSVYKPSYILSCLCKPVRFLCSPHSSQ 120

Query: 121 LLSHIFKVR 129
           LLS IFKVR
Sbjct: 121 LLSRIFKVR 129

[Close]
BLAST of IVF0008227 vs. NCBI nr
Match: XP_008445505.1 (PREDICTED: transcription and mRNA export factor SUS1 isoform X2 [Cucumis melo])

HSP 1 Score: 177 bits (448), Expect = 9.34e-55
Identity = 88/90 (97.78%), Postives = 88/90 (97.78%), Query Frame = 0 

Query: 1  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60
          MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL
Sbjct: 1  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60

Query: 61 CRAYVRKKGRNNVSVDDLVQVITPKGRGEV 90
          CRAYVRKKGRNNVSVDDLVQVITPKGR  V
Sbjct: 61 CRAYVRKKGRNNVSVDDLVQVITPKGRASV 90

[Close]
BLAST of IVF0008227 vs. NCBI nr
Match: XP_011657386.1 (transcription and mRNA export factor ENY2 [Cucumis sativus] >KGN47611.1 hypothetical protein Csa_019040 [Cucumis sativus])

HSP 1 Score: 177 bits (448), Expect = 9.34e-55
Identity = 88/90 (97.78%), Postives = 88/90 (97.78%), Query Frame = 0 

Query: 1  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60
          MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL
Sbjct: 1  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60

Query: 61 CRAYVRKKGRNNVSVDDLVQVITPKGRGEV 90
          CRAYVRKKGRNNVSVDDLVQVITPKGR  V
Sbjct: 61 CRAYVRKKGRNNVSVDDLVQVITPKGRASV 90

[Close]
BLAST of IVF0008227 vs. NCBI nr
Match: XP_038884208.1 (transcription and mRNA export factor ENY2 [Benincasa hispida] >XP_038884209.1 transcription and mRNA export factor ENY2 [Benincasa hispida])

HSP 1 Score: 174 bits (440), Expect = 1.55e-53
Identity = 86/90 (95.56%), Postives = 87/90 (96.67%), Query Frame = 0 

Query: 1  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60
          MRASINRPPTPEPEDDREH PTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKAL
Sbjct: 1  MRASINRPPTPEPEDDREHHPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60

Query: 61 CRAYVRKKGRNNVSVDDLVQVITPKGRGEV 90
          CRAYVRKKGRNNVSVDDLVQVITPKGR  V
Sbjct: 61 CRAYVRKKGRNNVSVDDLVQVITPKGRASV 90

[Close]
BLAST of IVF0008227 vs. NCBI nr
Match: XP_022951096.1 (transcription and mRNA export factor SUS1 [Cucurbita moschata] >XP_022951097.1 transcription and mRNA export factor SUS1 [Cucurbita moschata])

HSP 1 Score: 171 bits (433), Expect = 1.80e-52
Identity = 85/90 (94.44%), Postives = 86/90 (95.56%), Query Frame = 0 

Query: 1  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60
          MR SINRPPTPEPEDDRE QPTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKAL
Sbjct: 1  MRTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60

Query: 61 CRAYVRKKGRNNVSVDDLVQVITPKGRGEV 90
          CRAYVRKKGRNNVSVDDLVQVITPKGR  V
Sbjct: 61 CRAYVRKKGRNNVSVDDLVQVITPKGRASV 90

[Close]
BLAST of IVF0008227 vs. TAIR 10
Match: AT3G27100.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 118.6 bits (296), Expect = 3.6e-27
Identity = 56/100 (56.00%), Postives = 78/100 (78.00%), Query Frame = 0 

Query: 1   MRASINRPPTPEPED----DREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDE 60
           M+ S+NRPPTP+ +D      + + T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDE
Sbjct: 1   MKHSVNRPPTPDEDDVADGFEKDKVTLREIINVKLVESGEKENLMELVRDRLVECGWKDE 60

Query: 61  MKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSV 97
           M+  CR +V+KKGR +V+VD+L++VITPKGRG++    SV
Sbjct: 61  MRIACREHVKKKGRKDVTVDELIRVITPKGRGKIYNEQSV 100

[Close]
BLAST of IVF0008227 vs. TAIR 10
Match: AT3G27100.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 288 Blast hits to 288 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). )

HSP 1 Score: 115.2 bits (287), Expect = 4.0e-26
Identity = 54/94 (57.45%), Postives = 74/94 (78.72%), Query Frame = 0 

Query: 1  MRASINRPPTPEPED----DREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDE 60
          M+ S+NRPPTP+ +D      + + T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDE
Sbjct: 1  MKHSVNRPPTPDEDDVADGFEKDKVTLREIINVKLVESGEKENLMELVRDRLVECGWKDE 60

Query: 61 MKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEV 91
          M+  CR +V+KKGR +V+VD+L++VITPKGR  V
Sbjct: 61 MRIACREHVKKKGRKDVTVDELIRVITPKGRASV 94

The following BLAST results are available for this feature:
BLAST of IVF0008227 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6NQ545.7e-2557.45Transcription and mRNA export factor ENY2 OS=Arabidopsis thaliana OX=3702 GN=ENY... [more]
Q3ZBJ01.5e-1750.00Transcription and mRNA export factor ENY2 OS=Bos taurus OX=9913 GN=ENY2 PE=3 SV=... [more]
Q6DH421.5e-1748.94Transcription and mRNA export factor ENY2 OS=Danio rerio OX=7955 GN=eny2 PE=3 SV... [more]
Q9NPA81.5e-1750.00Transcription and mRNA export factor ENY2 OS=Homo sapiens OX=9606 GN=ENY2 PE=1 S... [more]
Q9JIX01.5e-1750.00Transcription and mRNA export factor ENY2 OS=Mus musculus OX=10090 GN=Eny2 PE=1 ... [more]
BLAST of IVF0008227 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4DVB56.9e-6699.22Transcription and mRNA export factor ENY2 OS=Cucumis melo OX=3656 GN=LOC10348850... [more]
A0A0A0KIM72.0e-4197.78Transcription and mRNA export factor ENY2 OS=Cucumis sativus OX=3659 GN=Csa_6G36... [more]
A0A1S3BDR52.0e-4197.78Transcription and mRNA export factor ENY2 OS=Cucumis melo OX=3656 GN=LOC10348850... [more]
A0A6J1KQ411.1e-3994.44Transcription and mRNA export factor ENY2 OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
A0A6J1GGQ41.1e-3994.44Transcription and mRNA export factor ENY2 OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
BLAST of IVF0008227 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016899913.12.28e-8699.22PREDICTED: transcription and mRNA export factor SUS1 isoform X1 [Cucumis melo][more]
XP_008445505.19.34e-5597.78PREDICTED: transcription and mRNA export factor SUS1 isoform X2 [Cucumis melo][more]
XP_011657386.19.34e-5597.78transcription and mRNA export factor ENY2 [Cucumis sativus] >KGN47611.1 hypothet... [more]
XP_038884208.11.55e-5395.56transcription and mRNA export factor ENY2 [Benincasa hispida] >XP_038884209.1 tr... [more]
XP_022951096.11.80e-5294.44transcription and mRNA export factor SUS1 [Cucurbita moschata] >XP_022951097.1 t... [more]
BLAST of IVF0008227 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G27100.23.6e-2756.00FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT3G27100.14.0e-2657.45FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038212Transcription factor EnY2 superfamilyGENE3D1.10.246.140coord: 15..96
e-value: 1.9E-26
score: 94.2
IPR018783Transcription factor, enhancer of yellow 2PFAMPF10163EnY2coord: 25..91
e-value: 3.3E-23
score: 81.8
IPR018783Transcription factor, enhancer of yellow 2PANTHERPTHR12514ENHANCER OF YELLOW 2 TRANSCRIPTION FACTORcoord: 1..92
IPR018783Transcription factor, enhancer of yellow 2HAMAPMF_03046ENY2_Sus1coord: 22..109
score: 16.054319
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..23
NoneNo IPR availablePANTHERPTHR12514:SF3TRANSCRIPTION AND MRNA EXPORT FACTOR ENY2coord: 1..92

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0008227.2IVF0008227.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006325 chromatin organization
biological_process GO:0016578 histone deubiquitination
biological_process GO:0016973 poly(A)+ mRNA export from nucleus
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0045040 protein insertion into mitochondrial outer membrane
biological_process GO:0006357 regulation of transcription by RNA polymerase II
biological_process GO:0006368 transcription elongation from RNA polymerase II promoter
biological_process GO:0006406 mRNA export from nucleus
cellular_component GO:0071819 DUBm complex
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005742 mitochondrial outer membrane translocase complex
cellular_component GO:0005643 nuclear pore
cellular_component GO:0000124 SAGA complex
cellular_component GO:0070390 transcription export complex 2
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003713 transcription coactivator activity