IVF0008073 (gene) Melon (IVF77) v1

Overview


Name	IVF0008073
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	THO complex subunit 6
Location	chr02: 2165700 .. 2173767 (-)
RNA-Seq Expression	IVF0008073
Synteny	IVF0008073

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAAACAGAAAAATATGATTTTTGTTTTTGTTTTTCGTTTTTTTAAATTATAATAATTTTATTATTATTGTTTTTCTTAAACAGAACGTCATGTCGTTTGTTATTCGCCGATTGCTATTCGTCGTTCACCACAAAACAACGATACCGCTTACTAACAGTTCAGGCAGTTGCTTCACGAAGTTTCTCCGGTGAGACATCAAGGGTCGTCTTCCGATTTTCCGGCGTCCTTTTCTGGCAGTCTCGCCGCCGCAACTGAGTTGACAGCTTTCACTATTATCGTTTGAAGCAAATATCGAGCGACTGAAAATTGAGCTGTAGCAACAGATCATCAAATGTTGGCGGACGCAACAAATTGGGACGAAGCTGCCTACAGAGAGAGTATATATAAAGAAAGAGAGATTCAAACTCGTACTGTGTTCAGAACTGCCTGGGCGCCTTCTTTAAATGGCTGCCCTGAGACCATTGTAGCTGCATCCAGTGATGGATCCGTTGCCTCTTATTCTATTGCTTCTTGCATCTCTAAGCTGGTAAGGTTCTTGATTTTTGATATTGATAGTCATTTTGCTGTTTGATTTGCCTATGAAATCAGATGTTCTTCGAGGGCTTTTTTGGTTTGACTAGTGAAGGGCCAATACCGTGTTTAAAACCAAAATTCTTTCTTAACCCATCCATTTTGGATTCACTGACATTGAATCCTCAGAACTTCGCTCTTGGCAAAATTTATATTCTATCTGCAAACAAACTCAAATATCAGTAAATTGTTTGTGATTCAGACAACAGATGAAATTCGAACTGGATAAGACACATGTTGGAACGATTTGACCTCTAGGTTTCCCATTTATGATCATGAGTATTAAAACTTGATTGAAAGAAATTAATTATTTTAAGATCAAATTTAGTGCTACCCTTTCAAAGTTTTATCATGAGTTGCAGAATACTTGCCACTTCTTACGATGGTTGATTCAAACAATATGTAGTTGCAGAAGAAAAAAAGTTTATTTTGTGTATTTGGTGTTCATTGCCTGCACCCCTGTAGAGTTCCTCTTTGTTCTTCATTAGTAGTTTTGGACTAGGTATGTTGTGCATCTTACGAACTCTTTTCCTGATTATACCTATTTTTCATGCCTGTTTCAGCAATTTGGTTATGGAAATACTAAAAGGCAAGTCCATTTATCTCTTGTTTCAAGTTATTTCTAAATTTCCGGCTGCAAACTTGTAATAATGTTTCACTATGTGCCTTGCTTTAGTTTGTTAGCAGCAGAGCCTCATTGCTTCCTTCAAGGGCACGATGGGCCCACATATGATGTCAAATTTTATGACAATGGCGACAATACTCTATTACTGAGGTTCCTCTCTTTCCCAATACTATAATAGTGCGGGGACTTTCTTTTTTACTCTTTCATTTCTTGTAAATTTCATTCTAGTTCTATATCGAGTATTGTAATTGTATCTGTCATCTCATCCCAATGATCTCAACGCTGATTCTAAAGTGAATTTGAATATATATGTATGTTTATCATGGCTATTTTTTTGGATGGTGAGATGAATCCATAAACTTAGCTGTTGGATATCCATTATTTCAACTTCCAGAGGGTGATCTCGTAGTTTTCTTAAATTAGTTGACTTGTAATTATTTGAAATTCAAAGCTGCCTAAATGCTTTTGATTGGTTGTTGAATTTATAGTCATTGAAGAATAAAGATATACCTACAGATTGTAAAATTGAGTTAAACGGCAAGATAGAATGGGAGAAAAACTTGGGCTTGTTCTTGTCTTCTCGATTGAAATATCTGATTGATTGTGCACAACATTTTAGCTGTGGGGATGATGGTCACATTCGAGGATGGAGGTGGAGAGATTGTACAGATATAGAAGTGCCCATTTATTTGCAAGGTAATAGTTTATATATTTGTTATCTGTGGGAGTATCACAGCTTTCATGACCCCAGGGGCAGTCTTTTCATCTGTTTTTTTTTTTTTTTTTGACCGTCTGAAAGTTCCATTTTCTTGTTCTGCTATCACTCATTTTAAGGTTTTTGACTAGGTGTATCGTTTCAATTTTCAACTGTTATAATTACTTCATTCCTTTCTTGTTACTCCAGGTAGTCATATTGAGCCTGTAATGGACCTGATGAATCCTCAATTCAAGTAGGCTATTGACAAATGTTTTGTGTTTTTTTTTTCACTTATTTTTCATTGGCATTCTAATTCGGCCTGTAGTTAATCTGGTGAATTCTGGAAATGATTTGGTCGCCAAAAGATATATAATTCTACAATTGGCAATTATTAGATTTAGGTTTATATTCTGTTTGGCGCCTGTTTTTTTAGCTTTGGTCCTCATACTTTCTGAAAAGTGGTCACTTTTTTAAAGTACAATGGACGTTTTGAAAATACATAGACTAAAATGAACAAAAGTTGTAAGTATATAAACTAAAATGAACGTTTTGAAAGACAAGAGACCAAAATGACCAAAGGCTAAAAATATGAGTTTCTAACTTATATTTAAACCTAAAATTTAATATCCTGTGAATAATATTATACAAAAAGGAAAATCACTGGTTTTCCTTGGTTTTATGTTTCGTACTACTTTCTTCTAATTTATAAGAAACAGACCCCCATACTTTAATTATCTATCTGAAATTTCCGTGTTGAACATTAGTTTCGACTTTCAAGTATTGTCTTTTTGACTCCTTAATGAGATGTTTATCGGTTTATCTAATCATCTATATATATTAATACAGCAGCTGCTCTTGGAAAATGTTCAACATATAATCAAGGATGCTTTTAGTTTTTTTCCTTCGATAGATTTGTCTGACATAGCTTTATGTTTGTCTAATTTCTGATTTATAACTTAGCTGAAGATAAAATAAATATGGATTTGTTTCCCTTAGCGCATGTGATATCTCTTAATGCCCTCTTATTTTTTCATGTATCTTATTGCTGTCTTCTAGAGGTCCTTGGGGTGCTCTTTCTCCAATCCCCGAAAATAATGCAATTGCTACTGATGCCCAGGTTAACAATTTTGATATTTCCCTCTCTTACTCTATAACTTGTAAGCTAACACATGTGTTTTGGATGATTTTTGACTTTGCAAGTATGATTCTATTATATAGAAGTTGTCTTTGTTGATAATGTTGATTAATGCATAAATAGATCTTGTTATCAAGATTTATTAATCATTATCTTTGGTGTACTCTTAATAATTTAATTAAAATACCAAATAATTATATATACACACGTAGTAAGGTTTAGATTAGGATAGCTTCTTATCCACACACAGAATGAAAAGAGTATAAGAATAAGAACAGATGAGGTGATATCTTATTTTATTGGTATTTTACAGAGTGGATCCATTTTCTCTGCTGCTGGAGATTCTTGTGCGTATTGTTGGGATTTGGTACGTGTATTTTAAGGTGGATGGTGTAATTGTAAAAGTTTCCATTCATATCTTCTTTGCAGCCAAATAATTAACTTCCTCTTAGCTCTAACTGAGTTTCTGGCTTTCTGCGTCTTTAATTTCCAGGAGAGCGGTAAAGTAAAGATGGTGTTTAAGGGGCACTCTGACTACTTGCACTGTATTGTTGCTCGAAACACTGTCAATCAAGTAAAGTCTTTCCTTCTCTTTCTTCTTTGTACCATAGATTTTGATCTTCATTTCTACGTTAACCCTCTTTTGTATTTTGTATAGACTAGCGTAGTTTGTTCGTTTGTCTTGATTGTGGTCGGCCTCCTGGCAGGTTAACTAGTAATGAATTGGAAGAAAATGTCATTTCAAGGAAGTATACTTGCACAAATAAAAGAGCATTAGGCGTAGATGCATAAGATAGTTGGGATGAAGGTCTTGAAGTTATAAGACAGTTGAGTAAACAAGTGAAGCATCAAATGGATCCGGATGAAAACTGGAATTTTAAGAGAGTTCCTACTCCCCCAGAAATTGACTTCTCTGGCTAAAATCTTTTCTAGTTCTGCCATTGGCTACTTCTCTTTATCTTCAACTTTATCTCCACCCAACACTGTCCTTCACAACCCCCCGAGTCTGAGTAATCTGTCTCACTACATGTTTGCCAGGAATATTTGCGCTCTTATTAACTCTCCCATATAACATCTCCTCAGTTGTCTCATTTATTGCCTCCAGACTTGATTGTCTGTTGATCTAAATTAATGAATCAGGAGTCTATTGCTATGCCTGGTAATCTTTCTCTTTTAATAATAGTTTAGGTATGCAAGTAGTAGAGTGTTGCCATTTTCCCATACATTTATGGAAAGCATGAATTTTTTTAGATCTGCTTCAAGTTCTTTTCCTCTCCTTCATAGTCAATAGTTTCATGTTCTGTCACCAAGCTCTAAGTTTCTAACTCTATGGCAATTAAATTCACTTCTGAAAGTAAAGATACTTTATTATTATTATTGGTCCATTTCAAAATTAATTATTATGTCTTCGCTTGTTATAGTTTTTCTTTCAGCTTTATGTGTCAAAACATGTAATAATCACTAGATTTTGAACGGTACTTTTCATGTATATTCACACTATTTGTTTCACACCTTGAATTCCAGATCATAACTGGTTCAGAAGATGGTACAGCACGAATATGGGGTAGGGAATTATGCATCTATTTATATTTATTGATCTGAATAAGAAGGCTTAACCATTTTGTTCCTGCACTTGTATCATGCGTATTGAAAATTCCCTTTAACAAACGTAAATTTGTTGAGAGAACATAATTTAGCATGGTGGTTAGGACTTCTCAAAAAGAACACGGGTTTGAATTCTCTTTCGTTATCAGTCTTCAATCAATTGCAATCTTTACTTTATTAGATGGTAAATTTGGTTTGGGAGAATTTTGGGAATATGTAAACTATAAGAGCTTTTTTTTGTATCTTATACATTTTTATACTATCAAACAAACCAGATTGCAAGAGTGGAAAGTGCATTCAACTAATTGACCCTGCTAAGGATAAGAAGCTGAAAGGGCATTTCTCATTTGTTAGATGCATTGCTCTTGATGCAAGTGAAAGCTGGTTGGTAAGTACTTACTTAAAAAATCAGGAAATTCTCCCTTTTTTCTTTGTAATGTCTAATATCAATAATTTGTGTTTACGGCTACAGATTTGGGTATGGGTTTTCTGTGCAGTTGTCTTATTTTGTTGTTTGGCCTGTTTTCCATTTATTGAAAAAGAAAGAAGAGAAAACACAAGGTATACGTAAAAAGCCCCAGTACAGGGAGAAAAATTCACGATAGAAGTCTTTCTTATTATTTTCTAATAATCAAAAGAATAGGAGGGGTAAGAATATATATAGGCCACAATAAGTCTTTACAAATAAGGAAATAAAACTAGGGTATAATAAATTATAAAAATACCATTGCGGCTATACACACACAACTAGCTCCTTATTTCCAACGCCATTCTTCCTTATTCTTTATGGAAGTTATTTTTTCCCTGAAGGAAAATATTTTGATAATGGCTTTATATTACTTCATCATTCTTCGGCTTCTTGGTGGATATCTTGCCATGCAAAATTATTTTGCAATTGGTCTCTTTTGGGGGCATTTGGGACAATGAGAGTATCAGCTAATTACAAGTGGCATATGATTATTTTATCCTTTCTCCAGCTATCCTAGAACAGGAAGGATAGTTGACTTGATCTTAGCCTCTTGTTTCTTATCCTCCCATTGCTTTTACATTCAAGAAAAGAAAAATCTTTCTATTTGAAATGCAGGCATAGAAACACTTCCTACTTCTTCAATTGCCATACCGTAGAAACTCCAAGAACACAAAAAACACGAGCACTCAAAGACATATTGCAATATATCAATAGCCTTTTGATAGGGCTTTCTTTCCCAAGTTTCCACCCTGGAAAGTCCTTCAATTCTTCCAACTTTGTTCCCAACTCACTTCCTTTATTTATAATAAAAACCCATAACTAAACTCTCTAGCTAATTACTAATATCCTCTCCCCAACAAACATGCATACTAATAGTCCTAATATATTCATATCTAGGGTTCTCGGCTTCACCCACACTCCCGACCTCCTTTCTTAGACTGTATTAATTCTTTACACAAGGACTTGGGATATTTTTTACGCACTAGCTTCTTTAGTACAACAATTGTGGGGTTGAGGGATTGAATCTCCAACCTTTAAGGTGAAACGCTGTGTTGTTAATTATTGTTGAGCTAAGACTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTTTACATACTAATTAACACCAAGTTCACTAGTTAGAACTTCCTTTTTAAGAACTTCAACCTTTTAGCAATCGATCAAATGAAGTTTTGAAAAAGCGAGTTTGGTTCACATTCACTTGAGAATGTCAATTGTAAATTTGAAACAATGCTCCATCGTTTTTCATTTCAGTTCTATGCAAGAAAGATGAAAAAGTTGAAGACGTGACTTACTTTTTGCTGAAAACATATCTCTTGCTGCATTGATTGGTACAATTGAGTGGCACTCATGTGATGTTTTTTTTATGCTAGGCCTGTGCTGATGGTCGGAGTTTATCTGTTTGGAACCTTCCGTCTTCTGAATTCATTTCAAAAACTTTGACCCGTTCTTCATTGCAGGATATGGTTTTTTGTGATAATCAAGTGAGTCATTCTCCTCGAACTGATTATACTTCCAAATTTTAATTGATTGACACTAGCTTGCAATTAGGTATTGTTCAGAAATCTGTCTGTCACGTTTTCATCTTTCATTAGATGATCAGTCAAGATATATTTACCTATTTCCAAATTTCTTGTACATGATTTAGTGCAACAAGAAGGTCATTTTGCTTGCATAATTATTGTCAGACTTACAAGTTAAGAAGCATACATATTATGACCATGATACGACATGAGACTAGTAAGAAGTTATCAAAACTAGCACATGAGTAAATCAAATAGTGTCATCTTCGATATCTATTGCTATACCAGATTTTTTTGTCACCATTATATGTTCATTATTGTCTCTCCATGACCAGATATTAGGTGTTGGAGCAGAGCCATTCCTAACTCGCTTCGACATAAATGGATCAGTGCTTTCACAAATACAATGCGCCCCTCAGTCAGCTTTTTCTGTTGCATTGCATCCATCTGGCGTATGTATAACTTAATTCCTTCCTTAGTCTTCTCTTTGGAACTACTTCATGTCTCTCAATTCAGCTTGACACTATGGGAAGATTAGAAGTTAGTGATTCCTTGAAACCGAGTATTGGACTCTGAAGCCAACTCCAATGCAGCAACACTTTATATGCAAACCTTGGTGTTGTTCAACGTCTCATAATCCGCTAAGGCTTTTGGTTTAGTGATGATTTAGCATGTTATTAGAAGTTCTATGTTCGAACCCCCATAATATCGTCTTTTCTCCGATTAATATTTATTCCTACCTTCTACAAAATCTTCAAGTCCACAAGTGAAGTAGATTTAATCAAATTTATCGTTAACCCATCAATTTAAGCTTGAGTTCAGTAATGATACAACAAATATTTCATCATTATATTTTACATAATGAATTATGCCATAATGGAACTCCCGAGAGGATAACCTAAATTCAATGAACTTGCCTAGGCTATCGTACAACTACCTCTCATCAATTTGTGGCTGATGCTCATAAAATGATATTATCCTTCTCTCATTCTTGGATGGTTTATTTGTCTATTCAGGTTGCAGCAGTTGGAGGGTACGGTGGTCTCATCGATGTTATCTCGCAGTTTGGAAGTCACTTATGCACATTCTGCTGTCAATACAGATAAGAAGAGATATAACATTGCTTTACTACAGCAGTTGAGGATGTTGGAAATTGGAAGGTGTTGTATTTTGCTTCTCAAGGAGTTCCAATCCAAAAACTTTTTTCTTGTTGTATGTAGATTGCACATAATTAACCACTTTAGTTTGTCAGTTTTGATGTTCCTAGAGTATATGAACACTTCCATTCCAATATAGTCATGGCACTTGTATGGAGAAAGATTAGACTAAGTTTTAGGAAAATTATTTTAAATGATAAAATTTCTAAAATATTTAGAAATATAGCAAAATATCGCAACCTATATATGATACACTATGAT

mRNA sequence

TAAAAAACAGAAAAATATGATTTTTGTTTTTGTTTTTCGTTTTTTTAAATTATAATAATTTTATTATTATTGTTTTTCTTAAACAGAACGTCATGTCGTTTGTTATTCGCCGATTGCTATTCGTCGTTCACCACAAAACAACGATACCGCTTACTAACAGTTCAGGCAGTTGCTTCACGAAGTTTCTCCGGTGAGACATCAAGGGTCGTCTTCCGATTTTCCGGCGTCCTTTTCTGGCAGTCTCGCCGCCGCAACTGAGTTGACAGCTTTCACTATTATCGTTTGAAGCAAATATCGAGCGACTGAAAATTGAGCTGTAGCAACAGATCATCAAATGTTGGCGGACGCAACAAATTGGGACGAAGCTGCCTACAGAGAGAGTATATATAAAGAAAGAGAGATTCAAACTCGTACTGTGTTCAGAACTGCCTGGGCGCCTTCTTTAAATGGCTGCCCTGAGACCATTGTAGCTGCATCCAGTGATGGATCCGTTGCCTCTTATTCTATTGCTTCTTGCATCTCTAAGCTGCAATTTGGTTATGGAAATACTAAAAGTTTGTTAGCAGCAGAGCCTCATTGCTTCCTTCAAGGGCACGATGGGCCCACATATGATGTCAAATTTTATGACAATGGCGACAATACTCTATTACTGAGCTGTGGGGATGATGGTCACATTCGAGGATGGAGGTGGAGAGATTGTACAGATATAGAAGTGCCCATTTATTTGCAAGGTAGTCATATTGAGCCTGTAATGGACCTGATGAATCCTCAATTCAAAGGTCCTTGGGGTGCTCTTTCTCCAATCCCCGAAAATAATGCAATTGCTACTGATGCCCAGAGTGGATCCATTTTCTCTGCTGCTGGAGATTCTTGTGCGTATTGTTGGGATTTGGAGAGCGGTAAAGTAAAGATGGTGTTTAAGGGGCACTCTGACTACTTGCACTGTATTGTTGCTCGAAACACTGTCAATCAAATCATAACTGGTTCAGAAGATGGTACAGCACGAATATGGGATTGCAAGAGTGGAAAGTGCATTCAACTAATTGACCCTGCTAAGGATAAGAAGCTGAAAGGGCATTTCTCATTTGTTAGATGCATTGCTCTTGATGCAAGTGAAAGCTGGTTGGCCTGTGCTGATGGTCGGAGTTTATCTGTTTGGAACCTTCCGTCTTCTGAATTCATTTCAAAAACTTTGACCCGTTCTTCATTGCAGGATATGGTTTTTTGTGATAATCAAATATTAGGTGTTGGAGCAGAGCCATTCCTAACTCGCTTCGACATAAATGGATCAGTGCTTTCACAAATACAATGCGCCCCTCAGTCAGCTTTTTCTGTTGCATTGCATCCATCTGGCGTTGCAGCAGTTGGAGGGTACGGTGGTCTCATCGATGTTATCTCGCAGTTTGGAAGTCACTTATGCACATTCTGCTGTCAATACAGATAAGAAGAGATATAACATTGCTTTACTACAGCAGTTGAGGATGTTGGAAATTGGAAGGTGTTGTATTTTGCTTCTCAAGGAGTTCCAATCCAAAAACTTTTTTCTTGTTGTATGTAGATTGCACATAATTAACCACTTTAGTTTGTCAGTTTTGATGTTCCTAGAGTATATGAACACTTCCATTCCAATATAGTCATGGCACTTGTATGGAGAAAGATTAGACTAAGTTTTAGGAAAATTATTTTAAATGATAAAATTTCTAAAATATTTAGAAATATAGCAAAATATCGCAACCTATATATGATACACTATGAT

Coding sequence (CDS)

ATGTTGGCGGACGCAACAAATTGGGACGAAGCTGCCTACAGAGAGAGTATATATAAAGAAAGAGAGATTCAAACTCGTACTGTGTTCAGAACTGCCTGGGCGCCTTCTTTAAATGGCTGCCCTGAGACCATTGTAGCTGCATCCAGTGATGGATCCGTTGCCTCTTATTCTATTGCTTCTTGCATCTCTAAGCTGCAATTTGGTTATGGAAATACTAAAAGTTTGTTAGCAGCAGAGCCTCATTGCTTCCTTCAAGGGCACGATGGGCCCACATATGATGTCAAATTTTATGACAATGGCGACAATACTCTATTACTGAGCTGTGGGGATGATGGTCACATTCGAGGATGGAGGTGGAGAGATTGTACAGATATAGAAGTGCCCATTTATTTGCAAGGTAGTCATATTGAGCCTGTAATGGACCTGATGAATCCTCAATTCAAAGGTCCTTGGGGTGCTCTTTCTCCAATCCCCGAAAATAATGCAATTGCTACTGATGCCCAGAGTGGATCCATTTTCTCTGCTGCTGGAGATTCTTGTGCGTATTGTTGGGATTTGGAGAGCGGTAAAGTAAAGATGGTGTTTAAGGGGCACTCTGACTACTTGCACTGTATTGTTGCTCGAAACACTGTCAATCAAATCATAACTGGTTCAGAAGATGGTACAGCACGAATATGGGATTGCAAGAGTGGAAAGTGCATTCAACTAATTGACCCTGCTAAGGATAAGAAGCTGAAAGGGCATTTCTCATTTGTTAGATGCATTGCTCTTGATGCAAGTGAAAGCTGGTTGGCCTGTGCTGATGGTCGGAGTTTATCTGTTTGGAACCTTCCGTCTTCTGAATTCATTTCAAAAACTTTGACCCGTTCTTCATTGCAGGATATGGTTTTTTGTGATAATCAAATATTAGGTGTTGGAGCAGAGCCATTCCTAACTCGCTTCGACATAAATGGATCAGTGCTTTCACAAATACAATGCGCCCCTCAGTCAGCTTTTTCTGTTGCATTGCATCCATCTGGCGTTGCAGCAGTTGGAGGGTACGGTGGTCTCATCGATGTTATCTCGCAGTTTGGAAGTCACTTATGCACATTCTGCTGTCAATACAGATAA

Protein sequence

MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISKLQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWRDCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLIDVISQFGSHLCTFCCQYR

Homology

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BLAST of IVF0008073 vs. ExPASy Swiss-Prot
Match: Q8L4M1 (THO complex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=THO6 PE=1 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 1.8e-132
Identity = 216/366 (59.02%), Postives = 288/366 (78.69%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLN-GCPETIVAASSDGSVASYSIA 60
           M  DATNW+E  YRESI KEREI+TRTVFRTAWAP      P+  V ASSDG++A +S+ 
Sbjct: 1   MYGDATNWNEDEYRESILKEREIETRTVFRTAWAPPARISNPDAFVVASSDGTLAFHSLN 60

Query: 61  SCISK-LQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWR 120
           S +S+   FGY   + ++ AEP   ++ H+GP YDVKFY   ++ LLLSCGDDG +RGW+
Sbjct: 61  SLVSQSASFGYSKGQDVMVAEPERVVRAHEGPAYDVKFYGEDEDALLLSCGDDGRVRGWK 120

Query: 121 WRDCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGD 180
           WR+  + +V ++L+ +H++P+++L+NPQ KGPWGALSP+PE NA++ D QSGS+F+AAGD
Sbjct: 121 WREFAESDVSLHLKENHLKPLLELINPQHKGPWGALSPMPEINAMSVDPQSGSVFTAAGD 180

Query: 181 SCAYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLID 240
           SCAYCWD+ESGK+KM FKGHSDYLH +V+R++ +QI+TGSEDGTARIWDCK+GKC+++I 
Sbjct: 181 SCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIG 240

Query: 241 PAKDKKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFC 300
            ++DKK +     V  +ALD SESWL C  G++L++WNLP+SE +      + +QD++F 
Sbjct: 241 -SQDKKSRLR---VSSMALDGSESWLVCGQGKNLALWNLPASECVQTIPIPAHVQDVMFD 300

Query: 301 DNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLIDVISQFG 360
           + QIL VGAEP L RFD+NG++LSQI CAP S FS++LHP+GV AVGGYGG++DVISQFG
Sbjct: 301 EKQILTVGAEPLLRRFDLNGALLSQIHCAPCSVFSISLHPAGVVAVGGYGGIVDVISQFG 360

Query: 361 SHLCTF 365
           SHLCTF
Sbjct: 361 SHLCTF 362

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BLAST of IVF0008073 vs. ExPASy Swiss-Prot
Match: Q5XJS5 (THO complex subunit 6 homolog OS=Danio rerio OX=7955 GN=thoc6 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 9.8e-30
Identity = 93/348 (26.72%), Postives = 160/348 (45.98%), Query Frame = 0


Query: 22  EIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIASCISKLQFGYGNTKSLLAAEPH 81
           E+   +VF  +++P    C   + A ++ G +A +S+++ +S          S  + +P 
Sbjct: 5   ELLHMSVFSQSFSP----CGRYLAAGNNYGEIAVFSLSAALSP-------DASERSQKPI 64

Query: 82  CFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWRDCTDIEVPIYLQGSHIEPVMD 141
                HDGP + +        + LLS G +G I  W W                     +
Sbjct: 65  LNFTAHDGPVFSLL----STESHLLSAG-NGEISAWSW--------------------AE 124

Query: 142 LMNPQFKGPW------GALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVF 201
           L+    K  W           IPE NA+  + +  ++    GD+  +  D+E+G  K V 
Sbjct: 125 LIKKSTKAAWTRKPNYETSLEIPEINAMIINPKDNNLIVGGGDNNIHIMDMETGTFKSVL 184

Query: 202 KGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPAK-DKKLKGHF-SFVR 261
           KGH+DY+HC+  +    +I++G EDG  RIWD ++ + +  I+  K ++  +  F  ++ 
Sbjct: 185 KGHTDYIHCLSFKEREGEILSGGEDGAVRIWDSRTNRPVHCIEVFKYEECARPQFGKWIS 244

Query: 262 CIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFCDNQILGVGAEPFLTR 321
           C+A D+   W+ C  G SLS+W+L S    S        ++ V   + I+ VG  P+++ 
Sbjct: 245 CLATDS--DWMLCGGGPSLSLWHLRSMSPTSVFPLSGCQREAVSYQDLIMSVGEGPYVSH 304

Query: 322 FDINGSVLSQIQCAPQSAFSVALHPSG----VAAVGGYGGLIDVISQF 358
               G+V +QI C+P S  ++AL+       V  VGG    IDV + F
Sbjct: 305 CLHGGTVKAQIPCSPSSLNTLALNLKNTEHRVMTVGGSSHQIDVFTNF 314

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BLAST of IVF0008073 vs. ExPASy Swiss-Prot
Match: Q86W42 (THO complex subunit 6 homolog OS=Homo sapiens OX=9606 GN=THOC6 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 8.3e-29
Identity = 84/336 (25.00%), Postives = 157/336 (46.73%), Query Frame = 0


Query: 31  TAWAPSLNGCPETIVAASSDGSVASYSIASCISKLQFGYGNTKSLLAAEPHCFLQGHDGP 90
           T ++ S++ C + + A ++ G +A +S++S +S       +     + +P    Q HDGP
Sbjct: 26  TIFSQSVSPCGKFLAAGNNYGQIAIFSLSSALS-------SEAKEESKKPVVTFQAHDGP 85

Query: 91  TYDVKFYDNGDNTLLLSCGDDGHIRGWRWRDCTDIEVPIYLQGSHIEPVMDLMNPQFKGP 150
            Y +   D      LLS G DG ++ W W +               +   +L   Q   P
Sbjct: 86  VYSMVSTDRH----LLSAG-DGEVKAWLWAEMLK------------KGCKELWRRQ--PP 145

Query: 151 WGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIVARNT 210
           +     +PE NA+    +  S+  A GD   +  DLE+G    V +GH+DY+HC+  R  
Sbjct: 146 YRTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTFTRVLRGHTDYIHCLALRER 205

Query: 211 VNQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFS--FVRCIALDASESWLACAD 270
             ++++G EDG  R+WD ++ K +Q I+  K ++     +  ++ C+A D+   W+ C  
Sbjct: 206 SPEVLSGGEDGAVRLWDLRTAKEVQTIEVYKHEECSRPHNGRWIGCLATDS--DWMVCGG 265

Query: 271 GRSLSVWNLPSSEFISKTLTRSSLQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAP 330
           G +L++W+L SS   +    R+  + + F  + IL  G    + ++ ++G + +Q+  + 
Sbjct: 266 GPALTLWHLRSSTPTTIFPIRAPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVPGSS 325

Query: 331 QSAFSVALHPSGVA------AVGGYGGLIDVISQFG 359
               S++L+    A         G    +DV +  G
Sbjct: 326 PGLLSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLG 333

[Close]

BLAST of IVF0008073 vs. ExPASy Swiss-Prot
Match: Q5U4D9 (THO complex subunit 6 homolog OS=Mus musculus OX=10090 GN=Thoc6 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 5.4e-28
Identity = 84/336 (25.00%), Postives = 156/336 (46.43%), Query Frame = 0


Query: 31  TAWAPSLNGCPETIVAASSDGSVASYSIASCISKLQFGYGNTKSLLAAEPHCFLQGHDGP 90
           T ++ S++ C + + A ++ G +A +S+++ +S       +     + +P      HDGP
Sbjct: 26  TIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALS-------SEAKEESKKPVVVFHAHDGP 85

Query: 91  TYDVKFYDNGDNTLLLSCGDDGHIRGWRWRDCTDIEVPIYLQGSHIEPVMDLMNPQFKGP 150
            Y +   D      LLS G DG ++GW W +       I  +G       +L   Q   P
Sbjct: 86  VYSMVSTDRH----LLSAG-DGEVKGWLWAE-------ILKKG-----CKELWRRQ--PP 145

Query: 151 WGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIVARNT 210
           +     +PE NA+    +  S+  A GD   +  DLE+G      +GH+DY+HC+  R  
Sbjct: 146 YRTSLEVPEINALLLVPKENSLILAGGDCQLHSMDLETGAFTRALRGHTDYIHCLALRER 205

Query: 211 VNQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFS--FVRCIALDASESWLACAD 270
             ++++G EDG  R+WD +  K +Q I+  K ++     +  ++ C+A D+   W+ C  
Sbjct: 206 SPEVLSGGEDGAVRLWDLRIAKEVQTIEVYKHEECSRPHNGRWIGCLATDS--DWMVCGG 265

Query: 271 GRSLSVWNLPSSEFISKTLTRSSLQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAP 330
           G +L++W+L SS   +    R+  + + F  + IL  G    +  + ++G + +Q+  + 
Sbjct: 266 GPALTLWHLRSSTPTTVFPIRAPQKHVTFYQDLILSAGQGCCVNHWQLSGELKAQVPGSS 325

Query: 331 QSAFSVALHPSGVA------AVGGYGGLIDVISQFG 359
               S++L+    A         G    +DV +  G
Sbjct: 326 PGLLSLSLNQQPAAPECKVLTASGNSCRVDVFTNLG 333

[Close]

BLAST of IVF0008073 vs. ExPASy Swiss-Prot
Match: Q6AY87 (THO complex subunit 6 homolog OS=Rattus norvegicus OX=10116 GN=Thoc6 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 5.4e-28
Identity = 84/336 (25.00%), Postives = 156/336 (46.43%), Query Frame = 0


Query: 31  TAWAPSLNGCPETIVAASSDGSVASYSIASCISKLQFGYGNTKSLLAAEPHCFLQGHDGP 90
           T ++ S++ C + + A ++ G +A +S+++ +S       +     + +P      HDGP
Sbjct: 26  TIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALS-------SEAKEESKKPMVTFHAHDGP 85

Query: 91  TYDVKFYDNGDNTLLLSCGDDGHIRGWRWRDCTDIEVPIYLQGSHIEPVMDLMNPQFKGP 150
            Y +   D      LLS G DG ++GW W +       I  +G       +L   Q   P
Sbjct: 86  VYSMVSTDRH----LLSAG-DGEVKGWLWAE-------ILKKG-----CKELWRRQ--PP 145

Query: 151 WGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIVARNT 210
           +     +PE NA+    +  S+  A GD   +  DLE+G      +GH+DY+HC+  R  
Sbjct: 146 YRTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTFTRALRGHTDYIHCLALRER 205

Query: 211 VNQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFS--FVRCIALDASESWLACAD 270
             ++++G EDG  R+WD +  K +Q I+  K ++     +  ++ C+A D+   W+ C  
Sbjct: 206 SPEVLSGGEDGAVRLWDLRIAKEVQTIEVYKHEECSRPHNGRWIGCLATDS--DWMVCGG 265

Query: 271 GRSLSVWNLPSSEFISKTLTRSSLQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAP 330
           G +L++W+L SS   +    R+  + + F  + IL  G    +  + ++G + +Q+  + 
Sbjct: 266 GPALTLWHLRSSTPTTVFPIRAPQKHVTFYQDLILSAGQGCCVNHWQLSGELKAQVPGSS 325

Query: 331 QSAFSVALHPSGVA------AVGGYGGLIDVISQFG 359
               S++L+    A         G    +DV +  G
Sbjct: 326 PGLLSLSLNQQPAAPECKVLTASGNSCRVDVFTNLG 333

[Close]

BLAST of IVF0008073 vs. ExPASy TrEMBL
Match: A0A5A7UQQ6 (THO complex subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001940 PE=3 SV=1)

HSP 1 Score: 777.3 bits (2006), Expect = 2.8e-221
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60
           MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS
Sbjct: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60

Query: 61  CISKLQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR 120
           CISKLQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR
Sbjct: 61  CISKLQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR 120

Query: 121 DCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC 180
           DCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC
Sbjct: 121 DCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC 180

Query: 181 AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA 240
           AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA
Sbjct: 181 AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA 240

Query: 241 KDKKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFCDN 300
           KDKKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFCDN
Sbjct: 241 KDKKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFCDN 300

Query: 301 QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLIDVISQFGSH 360
           QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLIDVISQFGSH
Sbjct: 301 QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLIDVISQFGSH 360

Query: 361 LCTFCCQYR 370
           LCTFCCQYR
Sbjct: 361 LCTFCCQYR 369

[Close]

BLAST of IVF0008073 vs. ExPASy TrEMBL
Match: A0A1S3BQ99 (THO complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103492340 PE=3 SV=1)

HSP 1 Score: 777.3 bits (2006), Expect = 2.8e-221
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60
           MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS
Sbjct: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60

Query: 61  CISKLQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR 120
           CISKLQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR
Sbjct: 61  CISKLQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR 120

Query: 121 DCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC 180
           DCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC
Sbjct: 121 DCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC 180

Query: 181 AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA 240
           AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA
Sbjct: 181 AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA 240

Query: 241 KDKKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFCDN 300
           KDKKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFCDN
Sbjct: 241 KDKKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFCDN 300

Query: 301 QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLIDVISQFGSH 360
           QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLIDVISQFGSH
Sbjct: 301 QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLIDVISQFGSH 360

Query: 361 LCTFCCQYR 370
           LCTFCCQYR
Sbjct: 361 LCTFCCQYR 369

[Close]

BLAST of IVF0008073 vs. ExPASy TrEMBL
Match: A0A0A0LWJ2 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G589670 PE=3 SV=1)

HSP 1 Score: 765.4 bits (1975), Expect = 1.1e-217
Identity = 362/369 (98.10%), Postives = 367/369 (99.46%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60
           ML DATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS
Sbjct: 1   MLGDATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60

Query: 61  CISKLQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR 120
           CISKLQFGYGNTKSLLAAEP+CFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR
Sbjct: 61  CISKLQFGYGNTKSLLAAEPNCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR 120

Query: 121 DCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC 180
           DCTDI+VPI LQGSHIEPVMDL+NPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC
Sbjct: 121 DCTDIKVPISLQGSHIEPVMDLINPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC 180

Query: 181 AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA 240
           AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA
Sbjct: 181 AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA 240

Query: 241 KDKKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFCDN 300
           KDKKLKGHFSFVRCIALDASESWLACADGRS+SVWNLPSSEFISKTLTRSSLQDMVFCDN
Sbjct: 241 KDKKLKGHFSFVRCIALDASESWLACADGRSISVWNLPSSEFISKTLTRSSLQDMVFCDN 300

Query: 301 QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLIDVISQFGSH 360
           QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGL+DVISQFGSH
Sbjct: 301 QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLVDVISQFGSH 360

Query: 361 LCTFCCQYR 370
           LCTFCCQYR
Sbjct: 361 LCTFCCQYR 369

[Close]

BLAST of IVF0008073 vs. ExPASy TrEMBL
Match: A0A6J1D376 (THO complex subunit 6 OS=Momordica charantia OX=3673 GN=LOC111016586 PE=3 SV=1)

HSP 1 Score: 723.4 bits (1866), Expect = 4.8e-205
Identity = 337/369 (91.33%), Postives = 352/369 (95.39%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60
           M ADATNWDE AYRESI+KERE+QTRTVFRTAWAPSLNG PETIV ASSDGS+ASYSIAS
Sbjct: 1   MSADATNWDEDAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60

Query: 61  CISKLQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR 120
           CISKL FGY N KS LAAEPHCFLQGHDGP YDVKFYD+GDNTLLLSCGDDGHIRGWRWR
Sbjct: 61  CISKLHFGYSNAKSFLAAEPHCFLQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWRWR 120

Query: 121 DCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC 180
           +CTDIE+PIY QGSHIEPVMDL NPQ+KGPWGALSPIPENNAIATDAQ GSIFSAAGDSC
Sbjct: 121 ECTDIEMPIYFQGSHIEPVMDLTNPQYKGPWGALSPIPENNAIATDAQGGSIFSAAGDSC 180

Query: 181 AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA 240
           AYCWDLES K+KMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQ+IDPA
Sbjct: 181 AYCWDLESCKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQVIDPA 240

Query: 241 KDKKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFCDN 300
           KDKKLKGHFS +RCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSS+QDM FCDN
Sbjct: 241 KDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMAFCDN 300

Query: 301 QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLIDVISQFGSH 360
           QILG+GAEP LTRFD+NGS+LSQIQCAPQSAFSVALHPSGVAAVGGYGGL+DVISQFGSH
Sbjct: 301 QILGIGAEPSLTRFDVNGSILSQIQCAPQSAFSVALHPSGVAAVGGYGGLVDVISQFGSH 360

Query: 361 LCTFCCQYR 370
           LCTF CQYR
Sbjct: 361 LCTFRCQYR 369

[Close]

BLAST of IVF0008073 vs. ExPASy TrEMBL
Match: A0A6J1F6F8 (THO complex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC111441243 PE=3 SV=1)

HSP 1 Score: 722.6 bits (1864), Expect = 8.2e-205
Identity = 336/370 (90.81%), Postives = 358/370 (96.76%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60
           ML DATNWDE AYRES+YKERE+QTRTVFRTAWAPSL+GCPE+IV ASSDGS+ASYSIAS
Sbjct: 1   MLGDATNWDEDAYRESLYKEREVQTRTVFRTAWAPSLSGCPESIVVASSDGSIASYSIAS 60

Query: 61  CISKLQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR 120
           CISKL  GYGNTKSLLAAEPHCFLQGHDGPTYDVKF+D GDNTLLLSCGDDGHIRGWRW 
Sbjct: 61  CISKLHSGYGNTKSLLAAEPHCFLQGHDGPTYDVKFFDAGDNTLLLSCGDDGHIRGWRWN 120

Query: 121 DCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC 180
           +CTDIEVPIYLQGSHIEPVMDLMNPQ+KGPWGALSPIPENNAIAT+AQSGSIFSAAGDSC
Sbjct: 121 ECTDIEVPIYLQGSHIEPVMDLMNPQYKGPWGALSPIPENNAIATNAQSGSIFSAAGDSC 180

Query: 181 AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA 240
           AYCWDLESGK+KMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCK+GKCIQL+DPA
Sbjct: 181 AYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKTGKCIQLLDPA 240

Query: 241 KD-KKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFCD 300
           KD KK KG+FS VRCIALDASESWLACADGRS SVWNLP+S+FIS+TLTRSS+QDMVFCD
Sbjct: 241 KDNKKQKGNFSCVRCIALDASESWLACADGRSFSVWNLPASDFISRTLTRSSMQDMVFCD 300

Query: 301 NQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLIDVISQFGS 360
           NQILGVGAEP LTRFDI+GS+LS+IQCAPQSAFSVA+HPSGVAAVGGYGGL+DVISQFGS
Sbjct: 301 NQILGVGAEPLLTRFDIHGSILSEIQCAPQSAFSVAVHPSGVAAVGGYGGLVDVISQFGS 360

Query: 361 HLCTFCCQYR 370
           HLCTFCCQYR
Sbjct: 361 HLCTFCCQYR 370

[Close]

BLAST of IVF0008073 vs. NCBI nr
Match: XP_008450878.1 (PREDICTED: THO complex subunit 6 [Cucumis melo] >KAA0055809.1 THO complex subunit 6 [Cucumis melo var. makuwa] >TYK10060.1 THO complex subunit 6 [Cucumis melo var. makuwa])

HSP 1 Score: 773 bits (1995), Expect = 2.38e-282
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60
           MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS
Sbjct: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60

Query: 61  CISKLQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR 120
           CISKLQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR
Sbjct: 61  CISKLQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR 120

Query: 121 DCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC 180
           DCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC
Sbjct: 121 DCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC 180

Query: 181 AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA 240
           AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA
Sbjct: 181 AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA 240

Query: 241 KDKKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFCDN 300
           KDKKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFCDN
Sbjct: 241 KDKKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFCDN 300

Query: 301 QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLIDVISQFGSH 360
           QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLIDVISQFGSH
Sbjct: 301 QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLIDVISQFGSH 360

Query: 361 LCTFCCQYR 369
           LCTFCCQYR
Sbjct: 361 LCTFCCQYR 369

[Close]

BLAST of IVF0008073 vs. NCBI nr
Match: XP_004144008.1 (THO complex subunit 6 [Cucumis sativus] >KGN66260.1 hypothetical protein Csa_007648 [Cucumis sativus])

HSP 1 Score: 761 bits (1964), Expect = 1.27e-277
Identity = 362/369 (98.10%), Postives = 367/369 (99.46%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60
           ML DATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS
Sbjct: 1   MLGDATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60

Query: 61  CISKLQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR 120
           CISKLQFGYGNTKSLLAAEP+CFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR
Sbjct: 61  CISKLQFGYGNTKSLLAAEPNCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR 120

Query: 121 DCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC 180
           DCTDI+VPI LQGSHIEPVMDL+NPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC
Sbjct: 121 DCTDIKVPISLQGSHIEPVMDLINPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC 180

Query: 181 AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA 240
           AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA
Sbjct: 181 AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA 240

Query: 241 KDKKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFCDN 300
           KDKKLKGHFSFVRCIALDASESWLACADGRS+SVWNLPSSEFISKTLTRSSLQDMVFCDN
Sbjct: 241 KDKKLKGHFSFVRCIALDASESWLACADGRSISVWNLPSSEFISKTLTRSSLQDMVFCDN 300

Query: 301 QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLIDVISQFGSH 360
           QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGL+DVISQFGSH
Sbjct: 301 QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLVDVISQFGSH 360

Query: 361 LCTFCCQYR 369
           LCTFCCQYR
Sbjct: 361 LCTFCCQYR 369

[Close]

BLAST of IVF0008073 vs. NCBI nr
Match: XP_038880261.1 (THO complex subunit 6 isoform X4 [Benincasa hispida] >XP_038880262.1 THO complex subunit 6 isoform X4 [Benincasa hispida])

HSP 1 Score: 755 bits (1949), Expect = 2.45e-275
Identity = 355/369 (96.21%), Postives = 366/369 (99.19%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60
           MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGS+ASYSIAS
Sbjct: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSIASYSIAS 60

Query: 61  CISKLQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR 120
           CISKL FGYGNT+SLLAAEPHCFLQGHDGP YDVKFYDNG+NTLLLSCGDDGHIRGWRWR
Sbjct: 61  CISKLHFGYGNTRSLLAAEPHCFLQGHDGPAYDVKFYDNGNNTLLLSCGDDGHIRGWRWR 120

Query: 121 DCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC 180
           +CTDIEVPIYLQGSHIEPVMDLMNPQ+KGPWGALSP+PENNAIA+DAQSGSIFSAAGDSC
Sbjct: 121 ECTDIEVPIYLQGSHIEPVMDLMNPQYKGPWGALSPMPENNAIASDAQSGSIFSAAGDSC 180

Query: 181 AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA 240
           AYCWDLESGK+KMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA
Sbjct: 181 AYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA 240

Query: 241 KDKKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFCDN 300
           KDKKLKGHFS +RCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSS+QDMVFCDN
Sbjct: 241 KDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMVFCDN 300

Query: 301 QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLIDVISQFGSH 360
           QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGL+DVISQFGSH
Sbjct: 301 QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLVDVISQFGSH 360

Query: 361 LCTFCCQYR 369
           LCTFCCQYR
Sbjct: 361 LCTFCCQYR 369

[Close]

BLAST of IVF0008073 vs. NCBI nr
Match: XP_022147721.1 (THO complex subunit 6 [Momordica charantia])

HSP 1 Score: 719 bits (1855), Expect = 5.23e-261
Identity = 337/369 (91.33%), Postives = 352/369 (95.39%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60
           M ADATNWDE AYRESI+KERE+QTRTVFRTAWAPSLNG PETIV ASSDGS+ASYSIAS
Sbjct: 1   MSADATNWDEDAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60

Query: 61  CISKLQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR 120
           CISKL FGY N KS LAAEPHCFLQGHDGP YDVKFYD+GDNTLLLSCGDDGHIRGWRWR
Sbjct: 61  CISKLHFGYSNAKSFLAAEPHCFLQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWRWR 120

Query: 121 DCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC 180
           +CTDIE+PIY QGSHIEPVMDL NPQ+KGPWGALSPIPENNAIATDAQ GSIFSAAGDSC
Sbjct: 121 ECTDIEMPIYFQGSHIEPVMDLTNPQYKGPWGALSPIPENNAIATDAQGGSIFSAAGDSC 180

Query: 181 AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA 240
           AYCWDLES K+KMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQ+IDPA
Sbjct: 181 AYCWDLESCKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQVIDPA 240

Query: 241 KDKKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFCDN 300
           KDKKLKGHFS +RCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSS+QDM FCDN
Sbjct: 241 KDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMAFCDN 300

Query: 301 QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLIDVISQFGSH 360
           QILG+GAEP LTRFD+NGS+LSQIQCAPQSAFSVALHPSGVAAVGGYGGL+DVISQFGSH
Sbjct: 301 QILGIGAEPSLTRFDVNGSILSQIQCAPQSAFSVALHPSGVAAVGGYGGLVDVISQFGSH 360

Query: 361 LCTFCCQYR 369
           LCTF CQYR
Sbjct: 361 LCTFRCQYR 369

[Close]

BLAST of IVF0008073 vs. NCBI nr
Match: XP_022934010.1 (THO complex subunit 6 [Cucurbita moschata])

HSP 1 Score: 718 bits (1853), Expect = 1.10e-260
Identity = 336/370 (90.81%), Postives = 358/370 (96.76%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60
           ML DATNWDE AYRES+YKERE+QTRTVFRTAWAPSL+GCPE+IV ASSDGS+ASYSIAS
Sbjct: 1   MLGDATNWDEDAYRESLYKEREVQTRTVFRTAWAPSLSGCPESIVVASSDGSIASYSIAS 60

Query: 61  CISKLQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR 120
           CISKL  GYGNTKSLLAAEPHCFLQGHDGPTYDVKF+D GDNTLLLSCGDDGHIRGWRW 
Sbjct: 61  CISKLHSGYGNTKSLLAAEPHCFLQGHDGPTYDVKFFDAGDNTLLLSCGDDGHIRGWRWN 120

Query: 121 DCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC 180
           +CTDIEVPIYLQGSHIEPVMDLMNPQ+KGPWGALSPIPENNAIAT+AQSGSIFSAAGDSC
Sbjct: 121 ECTDIEVPIYLQGSHIEPVMDLMNPQYKGPWGALSPIPENNAIATNAQSGSIFSAAGDSC 180

Query: 181 AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA 240
           AYCWDLESGK+KMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCK+GKCIQL+DPA
Sbjct: 181 AYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKTGKCIQLLDPA 240

Query: 241 KD-KKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFCD 300
           KD KK KG+FS VRCIALDASESWLACADGRS SVWNLP+S+FIS+TLTRSS+QDMVFCD
Sbjct: 241 KDNKKQKGNFSCVRCIALDASESWLACADGRSFSVWNLPASDFISRTLTRSSMQDMVFCD 300

Query: 301 NQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLIDVISQFGS 360
           NQILGVGAEP LTRFDI+GS+LS+IQCAPQSAFSVA+HPSGVAAVGGYGGL+DVISQFGS
Sbjct: 301 NQILGVGAEPLLTRFDIHGSILSEIQCAPQSAFSVAVHPSGVAAVGGYGGLVDVISQFGS 360

Query: 361 HLCTFCCQYR 369
           HLCTFCCQYR
Sbjct: 361 HLCTFCCQYR 370

[Close]

BLAST of IVF0008073 vs. TAIR 10
Match: AT2G19430.1 (DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 )

HSP 1 Score: 473.8 bits (1218), Expect = 1.3e-133
Identity = 216/366 (59.02%), Postives = 288/366 (78.69%), Query Frame = 0


Query: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLN-GCPETIVAASSDGSVASYSIA 60
           M  DATNW+E  YRESI KEREI+TRTVFRTAWAP      P+  V ASSDG++A +S+ 
Sbjct: 1   MYGDATNWNEDEYRESILKEREIETRTVFRTAWAPPARISNPDAFVVASSDGTLAFHSLN 60

Query: 61  SCISK-LQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWR 120
           S +S+   FGY   + ++ AEP   ++ H+GP YDVKFY   ++ LLLSCGDDG +RGW+
Sbjct: 61  SLVSQSASFGYSKGQDVMVAEPERVVRAHEGPAYDVKFYGEDEDALLLSCGDDGRVRGWK 120

Query: 121 WRDCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGD 180
           WR+  + +V ++L+ +H++P+++L+NPQ KGPWGALSP+PE NA++ D QSGS+F+AAGD
Sbjct: 121 WREFAESDVSLHLKENHLKPLLELINPQHKGPWGALSPMPEINAMSVDPQSGSVFTAAGD 180

Query: 181 SCAYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLID 240
           SCAYCWD+ESGK+KM FKGHSDYLH +V+R++ +QI+TGSEDGTARIWDCK+GKC+++I 
Sbjct: 181 SCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIG 240

Query: 241 PAKDKKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFC 300
            ++DKK +     V  +ALD SESWL C  G++L++WNLP+SE +      + +QD++F 
Sbjct: 241 -SQDKKSRLR---VSSMALDGSESWLVCGQGKNLALWNLPASECVQTIPIPAHVQDVMFD 300

Query: 301 DNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLIDVISQFG 360
           + QIL VGAEP L RFD+NG++LSQI CAP S FS++LHP+GV AVGGYGG++DVISQFG
Sbjct: 301 EKQILTVGAEPLLRRFDLNGALLSQIHCAPCSVFSISLHPAGVVAVGGYGGIVDVISQFG 360

Query: 361 SHLCTF 365
           SHLCTF
Sbjct: 361 SHLCTF 362

[Close]

BLAST of IVF0008073 vs. TAIR 10
Match: AT2G43770.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 4.2e-12
Identity = 68/231 (29.44%), Postives = 93/231 (40.26%), Query Frame = 0


Query: 68  GYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR-DCTDIE 127
           G   T SL A  P   L GH    Y +KF  N   TL+ S   D  I  WR   DC +  
Sbjct: 35  GKNRTSSLEA--PIMLLSGHPSAVYTMKF--NPAGTLIASGSHDREIFLWRVHGDCKNFM 94

Query: 128 VPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDL 187
           V   L+G H   ++DL        W               +    I SA+ D     WD+
Sbjct: 95  V---LKG-HKNAILDL-------HW--------------TSDGSQIVSASPDKTVRAWDV 154

Query: 188 ESGKVKMVFKGHSDYLH-CIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKL 247
           E+GK       HS +++ C   R     II+GS+DGTA++WD +    IQ   P K +  
Sbjct: 155 ETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTF-PDKYQIT 214

Query: 248 KGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMV 297
              FS       DA++          + VW+L   E    T+T    QD +
Sbjct: 215 AVSFS-------DAADKIFTGGVDNDVKVWDLRKGE---ATMTLEGHQDTI 225

[Close]

BLAST of IVF0008073 vs. TAIR 10
Match: AT5G64730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 4.7e-11
Identity = 42/161 (26.09%), Postives = 68/161 (42.24%), Query Frame = 0


Query: 84  LQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWRDCTDIEVPIYLQGSHIEPVMDLM 143
           L+GH+G     +F  NGD    L+CG D  IR   W     I +  Y   SH   V D  
Sbjct: 14  LKGHEGAVLAARF--NGDGNYALTCGKDRTIR--LWNPHRGILIKTY--KSHGREVRD-- 73

Query: 144 NPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLH 203
                              +   + +    S  GD   Y WD+ +G+V   F+GH   ++
Sbjct: 74  -------------------VHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVN 133

Query: 204 CIVARNTVNQIITGSEDGTARIWDCKSGKC--IQLIDPAKD 243
            +   ++ + +++   D + R+WDC+S     +Q+ID   D
Sbjct: 134 AVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLD 147

[Close]

BLAST of IVF0008073 vs. TAIR 10
Match: AT1G73720.1 (transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 63.5 bits (153), Expect = 4.0e-10
Identity = 50/193 (25.91%), Postives = 80/193 (41.45%), Query Frame = 0


Query: 48  SSDGS-VASYSIASCISKLQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLL 107
           S DG  +AS S+   I    +  G  K  L  +       HD P   + F  + D+ +L 
Sbjct: 222 SPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDF--SRDSEMLA 281

Query: 108 SCGDDGHIRGWRWRDCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATD 167
           S   DG I+ WR R      V I    +H + V                      +++  
Sbjct: 282 SGSQDGKIKIWRIR----TGVCIRRFDAHSQGV---------------------TSLSFS 341

Query: 168 AQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIW 227
                + S + D  A    L+SGK+   F+GH+ Y++  +  +  ++IIT S D T ++W
Sbjct: 342 RDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVW 387

Query: 228 DCKSGKCIQLIDP 240
           D K+  C+Q   P
Sbjct: 402 DSKTTDCLQTFKP 387

[Close]

BLAST of IVF0008073 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 8.9e-10
Identity = 27/80 (33.75%), Postives = 44/80 (55.00%), Query Frame = 0


Query: 163 IATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGT 222
           +A  + +  I SA+ D     WD+E+G +     GH++Y  C+      N I++GS D T
Sbjct: 77  VAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDET 136

Query: 223 ARIWDCKSGKCIQLIDPAKD 243
            RIWD  +GKC++++    D
Sbjct: 137 VRIWDVTTGKCLKVLPAHSD 156

The following BLAST results are available for this feature:

BLAST of IVF0008073 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L4M1	1.8e-132	59.02	THO complex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=THO6 PE=1 SV=1	[more]
Q5XJS5	9.8e-30	26.72	THO complex subunit 6 homolog OS=Danio rerio OX=7955 GN=thoc6 PE=2 SV=1	[more]
Q86W42	8.3e-29	25.00	THO complex subunit 6 homolog OS=Homo sapiens OX=9606 GN=THOC6 PE=1 SV=1	[more]
Q5U4D9	5.4e-28	25.00	THO complex subunit 6 homolog OS=Mus musculus OX=10090 GN=Thoc6 PE=1 SV=1	[more]
Q6AY87	5.4e-28	25.00	THO complex subunit 6 homolog OS=Rattus norvegicus OX=10116 GN=Thoc6 PE=2 SV=1	[more]

BLAST of IVF0008073 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UQQ6	2.8e-221	100.00	THO complex subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16...	[more]
A0A1S3BQ99	2.8e-221	100.00	THO complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103492340 PE=3 SV=1	[more]
A0A0A0LWJ2	1.1e-217	98.10	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G...	[more]
A0A6J1D376	4.8e-205	91.33	THO complex subunit 6 OS=Momordica charantia OX=3673 GN=LOC111016586 PE=3 SV=1	[more]
A0A6J1F6F8	8.2e-205	90.81	THO complex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC111441243 PE=3 SV=1	[more]

BLAST of IVF0008073 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450878.1	2.38e-282	100.00	PREDICTED: THO complex subunit 6 [Cucumis melo] >KAA0055809.1 THO complex subuni...	[more]
XP_004144008.1	1.27e-277	98.10	THO complex subunit 6 [Cucumis sativus] >KGN66260.1 hypothetical protein Csa_007...	[more]
XP_038880261.1	2.45e-275	96.21	THO complex subunit 6 isoform X4 [Benincasa hispida] >XP_038880262.1 THO complex...	[more]
XP_022147721.1	5.23e-261	91.33	THO complex subunit 6 [Momordica charantia]	[more]
XP_022934010.1	1.10e-260	90.81	THO complex subunit 6 [Cucurbita moschata]	[more]

BLAST of IVF0008073 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19430.1	1.3e-133	59.02	DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1	[more]
AT2G43770.1	4.2e-12	29.44	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G64730.1	4.7e-11	26.09	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G73720.1	4.0e-10	25.91	transducin family protein / WD-40 repeat family protein	[more]
AT3G49660.1	8.9e-10	33.75	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 77..118 e-value: 1.4E-4 score: 31.2 coord: 238..276 e-value: 0.42 score: 19.4 coord: 188..227 e-value: 1.1E-6 score: 38.3 coord: 317..355 e-value: 58.0 score: 5.9 coord: 150..185 e-value: 390.0 score: 0.7
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 191..227 e-value: 5.2E-4 score: 20.8 coord: 84..117 e-value: 0.023 score: 15.5 coord: 243..276 e-value: 2.4E-4 score: 21.8
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 84..117 score: 8.937796
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 195..236 score: 13.148488
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 12..154 e-value: 2.8E-11 score: 45.2
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 155..366 e-value: 3.6E-25 score: 90.2
IPR042626	THO complex subunit 6	PANTHER	PTHR44411	THO COMPLEX SUBUNIT 6 HOMOLOG	coord: 9..366
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 195..227 score: 10.126507
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 33..357

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0008073.1	IVF0008073.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009788	negative regulation of abscisic acid-activated signaling pathway
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
cellular_component	GO:0000347	THO complex
molecular_function	GO:0005515	protein binding