IVF0008053 (gene) Melon (IVF77) v1

Overview


Name	IVF0008053
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ribonuclease P protein subunit p38 isoform X6
Location	chr09: 17128627 .. 17132105 (+)
RNA-Seq Expression	IVF0008053
Synteny	IVF0008053

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTACATATTTTGAATTCTACAGTTGCAATAATACTTCACCAAAATTTCAAACAAAGCCTCGGGTTGGCAGTGCTACTTCGTCATCGTCCCGGTTTCACTATGGTTACTTCCAATCGGAGAACGCCGCCGTTATTTCTTTCCAGACTTTGAAACTACACTTTCCACCCAAGTTTTCACTAATGGGAAAGAACCCTAAATCTTCTGCTCATCCTGTTGCAACCCTTCAATCCAAACCTTACGAAGAGTAAGCAGGATTTCCTTTCCTTTCTTTTCTATTCGATTTTCTTACCTTTATGTTTTTCCCTAATTTGTATTGGAATACGTTTTTTCGAATTTGATTAAAGCAGTTCCTACGAAGGTGAACGTCTCGATGAGTTGCTACTGTCGATTCAGAGGTAAACGGTATTTAATTTGTCTAATAATGCACTTCAACAAACCCACCACTTACCCATCTCCTGTTGTTACAGAGAGATAAAGACAGCTAGAGGTTTGAATGCGGAATCCTTGCCGGAAAAAATTTGGCTTAAGGTTTCGTATTTTCAACGTCTTTAGTTTCTCTTTTCCATGTCATGTCGATAATGTACTTTTGTTATTAGTTATAAGCTACTTATGTTGAGTGATGGGATTTGTTTTAGAAACAGTATGCAATTGGAGTTAATGAGGTTACTAGAGCTCTTGAACGGATGACACCATGTGGGGATTCTGCTCGCTTAATGAACCCTAATTATAAGGCGTGTAAAGTCAAGCTTCAGGTAGTCTACTCGGTTATTTATGTTGGGCAATGCTATCTTGGGTTTAGACTCGTAAGTGTTACTTTACTGGCTTTTTCAGTTTTGTGTCAATCTCATGTGTGTGTTTGTTTTATTATGATATATAATTAAATTTACCTTCACCTACTGACTTAAGCTTTTGTGTCAATTGGTGATGTACGATTGATCTAAACAGGTTGGTTCAAGAAGTCTTGTGTTCAAAACTTGTGTTGTTGTTTCCTTCCCAATTAACATTATGTTAGATACCTAGATTAGTACCATGGGTTTATCTTGTGTAAGGGTAATTAGATTAGTCTAGGGTTAGGGGTTTAAGGGTAATTAGTTACTTAGGGAGTTACTAGTAATTATTGTGCAAGTATGGTTACTAGTAGTTATTATGTAAGTGTGGTTACTAGGGTGGTTACATCTTGTTATAAATGGAGGGAGGGTAAGTGAGAGAGGGAGATTATTCTGCGGGGTGATTTAGGGTTTAGGTGATAGTACTCAAGAGAGAGGTTCCAAGTACCTAATACTTGGGTTTATCTTGTATTTTTTTATAGTTCATTATAATAAATTAAGATCTTGTTCTTGTTAGCAAGTGTTCTAACACATTCGTTTTCACTTGTTGCGCCTTCTTCATATTTCGAGCCCACAAGTGAGAGAGAATGGAGTGTCATGGTATATAATAAAATTCATCGTCACCCATCAATTTAAACTTTTAGGTCAATCAGTGATTTAAGACACGAGAAGAGACAACAAGTTTAAAACATGAGCTACATTTGGTGCTTCCATGAGCTTTGGTTGTGATAAGCTGATTTCCTAAAACTTCCTAAGTCTCTTATTATTTTCTTTGTCGTCAAATTTTATCAACGAAATCCGTAGTGTAGTTACACAATTACATGCCTTCTTGGGGATTATGCTATTTGATTGGTAGAAGGCCATTAGTTGTACTTGGCCACAGTAGAAAACTTATACAAGAATGAGAATGGCCCATTGTTCATGTATCCTACAGAGTGTTGTTTGTTGGTTCATGCATCCTTCAGACATTTGGTCCTCAGTGAGATTCCATGCTTTTCTTTGGGCAAAGTTCTTTTGTAATTATTCCCTTGGTAATATTTTGCTAATTTGGAAGCCTTTCTTGTAGTAGGCTTGCTTTTGGTTGGCTTGTTTTTTCTTCATTTCTTGTATACCCTTGTATTCTTTCCTTCTTTCTCTATGAAAGTTGTCTTTTCATCGAAAAGTTGTATCCTACAGAGTGTTGTTTGTTTGTGAAGTATCTTGTCTCAATGCTGGGTACTAGTGTTAAAGCAAATTTAGTGGCCATTAGGTAGTGTTTCTTATGTAGCCAGAACTGGGATGAGGCTTTGAACTTCTATTTGTAAGTACTCTTTTCTCCCTGGTAAGCTTAGTTTCTCACTAATACATTCCATAGGTTTACCATTCTTAGATAGAACTGCTCCTACACCTTTAGCAGAACCATCCATCTGGACTTCATTGATTTCCACTAAAGATCCTAAGAACAACTGTTTTGTAAGATCATGCACTTTGAGATATTAAAGTAAAGCTCGTCTAAGTAGACAATTAGAATTTACCAAAGTATGGTCATAATACATGTATCATGAGGCACATAAAAGTACTTGGAGTATTGATCGAGCTAAAACGTATATGCACAACTTGCCTTATCTGCAAAGACTCGTCTGGGTCTTAAAGGCTATTTTTCATTTTCTCTTGGTTTGATTGACGTGACTGCTTAATCAGCCTACAAGTTTTGAAAGTGGTTTCGTTTTGTTCACGGATTAGATATTTTATGGCAAACTTTTACCTCTATTTTCAATATGTATTCTTTATATCATTCTAGTTCAACAGTGAATGTCATTGTGAATTCCTCAGGACAGGTATCCTTTTTATGCTTGATGTATACCTCTAGTGCAATTAAACCCAACTTATCGTGCTTTGTCTTCTGTCTTTTCTGTATGCACCGTTTAATTAATTCGACATTTCACCTTTTATTATGTAGGCTATACTATTAACAGCCAATTGCAACCCTCGATGGCTTACAAACCATGTGCCTTGCTTGGCCATGTCTAGGAAGGTACCATTGATACTCGTGAAAGATAAAGAAGGATCATTAAGGTTAGGTGAACTCGTTAACCTTAAAACAGCAATTGCAATTGGAATAAAGGTGAGTAAGAAATATTATATCTTTTATGTGTTGTGTTTTGTTCTAACTTTTTCCTTTTTCTAAAAAAGCTGCATGTTTCCAAACGAACTGCAGTCGAATGGGAGCCCTGTTAATCAACTTATTGATGAAATTCTTCAAAGAACAAAATAAAGACACGTTTCATGAGTACAACCAAGTTGTCCGGTGTTCACTGTACAGTAAAAATGATGTGAAATTGAAGCAGGTTCTTATCTTCTTCCCTCTAGCAGTCTGAAATGTCTAGCTTGCTAATCACATGAAATGGGTTCGAGTTGATTCATTCTAGATAATGACCACCACTTTAGTTGGAAAGATAGCTCGTAGATTTGGGGAATGTTGATCTTTTGAAAAGGTTGTTTGTGGCTGGAGTTACGAAAATTCGTAGTAACATGTGTCTTGTACATTCGATTGGAGGTTATGGAGATGAAAGATTACTTGTGTTTGGTATGCCTTACATTGTTTGTGTTAGACATGAATTTGTATTCCTATTAATTCCTATTAAATCCATCCATTTAAAATCAACCCAGC

mRNA sequence

CTCTACATATTTTGAATTCTACAGTTGCAATAATACTTCACCAAAATTTCAAACAAAGCCTCGGGTTGGCAGTGCTACTTCGTCATCGTCCCGGTTTCACTATGGTTACTTCCAATCGGAGAACGCCGCCGTTATTTCTTTCCAGACTTTGAAACTACACTTTCCACCCAAGTTTTCACTAATGGGAAAGAACCCTAAATCTTCTGCTCATCCTGTTGCAACCCTTCAATCCAAACCTTACGAAGATTCCTACGAAGGTGAACGTCTCGATGAGTTGCTACTGTCGATTCAGAGAGAGATAAAGACAGCTAGAGGTTTGAATGCGGAATCCTTGCCGGAAAAAATTTGGCTTAAGTATGCAATTGGAGTTAATGAGGTTACTAGAGCTCTTGAACGGATGACACCATGTGGGGATTCTGCTCGCTTAATGAACCCTAATTATAAGGCGTGTAAAGTCAAGCTTCAGGTAGTCTACTCGGTTATTTATGTTGGGCAATGCTATCTTGGGTTTAGACTCGCTATACTATTAACAGCCAATTGCAACCCTCGATGGCTTACAAACCATGTGCCTTGCTTGGCCATGTCTAGGAAGGTACCATTGATACTCGTGAAAGATAAAGAAGGATCATTAAGGTTAGGTGAACTCGTTAACCTTAAAACAGCAATTGCAATTGGAATAAAGTCGAATGGGAGCCCTGTTAATCAACTTATTGATGAAATTCTTCAAAGAACAAAATAAAGACACGTTTCATGAGTACAACCAAGTTGTCCGGTGTTCACTGTACAGTAAAAATGATGTGAAATTGAAGCAGGTTCTTATCTTCTTCCCTCTAGCAGTCTGAAATGTCTAGCTTGCTAATCACATGAAATGGGTTCGAGTTGATTCATTCTAGATAATGACCACCACTTTAGTTGGAAAGATAGCTCGTAGATTTGGGGAATGTTGATCTTTTGAAAAGGTTGTTTGTGGCTGGAGTTACGAAAATTCGTAGTAACATGTGTCTTGTACATTCGATTGGAGGTTATGGAGATGAAAGATTACTTGTGTTTGGTATGCCTTACATTGTTTGTGTTAGACATGAATTTGTATTCCTATTAATTCCTATTAAATCCATCCATTTAAAATCAACCCAGC

Coding sequence (CDS)

ATGGGAAAGAACCCTAAATCTTCTGCTCATCCTGTTGCAACCCTTCAATCCAAACCTTACGAAGATTCCTACGAAGGTGAACGTCTCGATGAGTTGCTACTGTCGATTCAGAGAGAGATAAAGACAGCTAGAGGTTTGAATGCGGAATCCTTGCCGGAAAAAATTTGGCTTAAGTATGCAATTGGAGTTAATGAGGTTACTAGAGCTCTTGAACGGATGACACCATGTGGGGATTCTGCTCGCTTAATGAACCCTAATTATAAGGCGTGTAAAGTCAAGCTTCAGGTAGTCTACTCGGTTATTTATGTTGGGCAATGCTATCTTGGGTTTAGACTCGCTATACTATTAACAGCCAATTGCAACCCTCGATGGCTTACAAACCATGTGCCTTGCTTGGCCATGTCTAGGAAGGTACCATTGATACTCGTGAAAGATAAAGAAGGATCATTAAGGTTAGGTGAACTCGTTAACCTTAAAACAGCAATTGCAATTGGAATAAAGTCGAATGGGAGCCCTGTTAATCAACTTATTGATGAAATTCTTCAAAGAACAAAATAA

Protein sequence

MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKIWLKYAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK

Homology

[Close]

BLAST of IVF0008053 vs. ExPASy TrEMBL
Match: A0A1S3CS63 (uncharacterized protein LOC103503720 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103503720 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 4.8e-97
Identity = 183/186 (98.39%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MGKNPKSSAHPVATLQSKPYED-SYEGERLDELLLSIQREIKTARGLNAESLPEKIWLKY 60
           MGKNPKSSAHPVATLQSKPYED SYEGERLDELLLSIQREIKTARGLNAESLPEK WLK+
Sbjct: 1   MGKNPKSSAHPVATLQSKPYEDSSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKF 60

Query: 61  AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLTAN 120
           AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLTAN
Sbjct: 61  AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLTAN 120

Query: 121 CNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDE 180
           CNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDE
Sbjct: 121 CNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDE 180

Query: 181 ILQRTK 186
           ILQRTK
Sbjct: 181 ILQRTK 186

[Close]

BLAST of IVF0008053 vs. ExPASy TrEMBL
Match: A0A1S3CQU5 (uncharacterized protein LOC103503720 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503720 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 6.3e-97
Identity = 183/187 (97.86%), Postives = 184/187 (98.40%), Query Frame = 0


Query: 1   MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKIWLK-- 60
           MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEK WLK  
Sbjct: 1   MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQ 60

Query: 61  YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLTA 120
           +AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLTA
Sbjct: 61  FAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLTA 120

Query: 121 NCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLID 180
           NCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLID
Sbjct: 121 NCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLID 180

Query: 181 EILQRTK 186
           EILQRTK
Sbjct: 181 EILQRTK 187

[Close]

BLAST of IVF0008053 vs. ExPASy TrEMBL
Match: A0A1S3CS60 (uncharacterized protein LOC103503720 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503720 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.6e-95
Identity = 183/188 (97.34%), Postives = 184/188 (97.87%), Query Frame = 0


Query: 1   MGKNPKSSAHPVATLQSKPYED-SYEGERLDELLLSIQREIKTARGLNAESLPEKIWLK- 60
           MGKNPKSSAHPVATLQSKPYED SYEGERLDELLLSIQREIKTARGLNAESLPEK WLK 
Sbjct: 1   MGKNPKSSAHPVATLQSKPYEDSSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKK 60

Query: 61  -YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLT 120
            +AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLT
Sbjct: 61  QFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLT 120

Query: 121 ANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLI 180
           ANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLI
Sbjct: 121 ANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLI 180

Query: 181 DEILQRTK 186
           DEILQRTK
Sbjct: 181 DEILQRTK 188

[Close]

BLAST of IVF0008053 vs. ExPASy TrEMBL
Match: A0A1S4E613 (uncharacterized protein LOC103503720 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103503720 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.3e-85
Identity = 165/170 (97.06%), Postives = 166/170 (97.65%), Query Frame = 0


Query: 1   MGKNPKSSAHPVATLQSKPYED-SYEGERLDELLLSIQREIKTARGLNAESLPEKIWLK- 60
           MGKNPKSSAHPVATLQSKPYED SYEGERLDELLLSIQREIKTARGLNAESLPEK WLK 
Sbjct: 1   MGKNPKSSAHPVATLQSKPYEDSSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKK 60

Query: 61  -YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLT 120
            +AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLT
Sbjct: 61  QFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLT 120

Query: 121 ANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIK 168
           ANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIK
Sbjct: 121 ANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIK 170

[Close]

BLAST of IVF0008053 vs. ExPASy TrEMBL
Match: A0A1S3CR39 (ribonuclease P protein subunit p38 isoform X6 OS=Cucumis melo OX=3656 GN=LOC103503720 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.4e-83
Identity = 166/187 (88.77%), Postives = 167/187 (89.30%), Query Frame = 0


Query: 1   MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKIWLK-- 60
           MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEK WLK  
Sbjct: 1   MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQ 60

Query: 61  YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLTA 120
           +AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ                 AILLTA
Sbjct: 61  FAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ-----------------AILLTA 120

Query: 121 NCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLID 180
           NCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLID
Sbjct: 121 NCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLID 170

Query: 181 EILQRTK 186
           EILQRTK
Sbjct: 181 EILQRTK 170

[Close]

BLAST of IVF0008053 vs. NCBI nr
Match: XP_008466271.1 (PREDICTED: uncharacterized protein LOC103503720 isoform X3 [Cucumis melo])

HSP 1 Score: 363 bits (931), Expect = 2.63e-126
Identity = 183/186 (98.39%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MGKNPKSSAHPVATLQSKPYEDS-YEGERLDELLLSIQREIKTARGLNAESLPEKIWLKY 60
           MGKNPKSSAHPVATLQSKPYEDS YEGERLDELLLSIQREIKTARGLNAESLPEK WLK+
Sbjct: 1   MGKNPKSSAHPVATLQSKPYEDSSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKF 60

Query: 61  AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLTAN 120
           AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLTAN
Sbjct: 61  AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLTAN 120

Query: 121 CNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDE 180
           CNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDE
Sbjct: 121 CNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDE 180

Query: 181 ILQRTK 185
           ILQRTK
Sbjct: 181 ILQRTK 186

[Close]

BLAST of IVF0008053 vs. NCBI nr
Match: XP_008466263.1 (PREDICTED: uncharacterized protein LOC103503720 isoform X2 [Cucumis melo])

HSP 1 Score: 362 bits (930), Expect = 3.88e-126
Identity = 183/187 (97.86%), Postives = 184/187 (98.40%), Query Frame = 0


Query: 1   MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKIWLK-- 60
           MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEK WLK  
Sbjct: 1   MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQ 60

Query: 61  YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLTA 120
           +AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLTA
Sbjct: 61  FAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLTA 120

Query: 121 NCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLID 180
           NCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLID
Sbjct: 121 NCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLID 180

Query: 181 EILQRTK 185
           EILQRTK
Sbjct: 181 EILQRTK 187

[Close]

BLAST of IVF0008053 vs. NCBI nr
Match: XP_008466254.1 (PREDICTED: uncharacterized protein LOC103503720 isoform X1 [Cucumis melo])

HSP 1 Score: 358 bits (918), Expect = 2.71e-124
Identity = 183/188 (97.34%), Postives = 184/188 (97.87%), Query Frame = 0


Query: 1   MGKNPKSSAHPVATLQSKPYEDS-YEGERLDELLLSIQREIKTARGLNAESLPEKIWLK- 60
           MGKNPKSSAHPVATLQSKPYEDS YEGERLDELLLSIQREIKTARGLNAESLPEK WLK 
Sbjct: 1   MGKNPKSSAHPVATLQSKPYEDSSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKK 60

Query: 61  -YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLT 120
            +AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLT
Sbjct: 61  QFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLT 120

Query: 121 ANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLI 180
           ANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLI
Sbjct: 121 ANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLI 180

Query: 181 DEILQRTK 185
           DEILQRTK
Sbjct: 181 DEILQRTK 188

[Close]

BLAST of IVF0008053 vs. NCBI nr
Match: XP_016903668.1 (PREDICTED: uncharacterized protein LOC103503720 isoform X4 [Cucumis melo])

HSP 1 Score: 323 bits (829), Expect = 8.73e-111
Identity = 165/170 (97.06%), Postives = 166/170 (97.65%), Query Frame = 0


Query: 1   MGKNPKSSAHPVATLQSKPYEDS-YEGERLDELLLSIQREIKTARGLNAESLPEKIWLK- 60
           MGKNPKSSAHPVATLQSKPYEDS YEGERLDELLLSIQREIKTARGLNAESLPEK WLK 
Sbjct: 1   MGKNPKSSAHPVATLQSKPYEDSSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKK 60

Query: 61  -YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLT 120
            +AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLT
Sbjct: 61  QFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLT 120

Query: 121 ANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIK 167
           ANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIK
Sbjct: 121 ANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIK 170

[Close]

BLAST of IVF0008053 vs. NCBI nr
Match: XP_008466288.1 (PREDICTED: ribonuclease P protein subunit p38 isoform X6 [Cucumis melo])

HSP 1 Score: 317 bits (813), Expect = 1.47e-108
Identity = 166/187 (88.77%), Postives = 167/187 (89.30%), Query Frame = 0


Query: 1   MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKIWLK-- 60
           MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEK WLK  
Sbjct: 1   MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQ 60

Query: 61  YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLTA 120
           +AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ                 AILLTA
Sbjct: 61  FAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ-----------------AILLTA 120

Query: 121 NCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLID 180
           NCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLID
Sbjct: 121 NCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLID 170

Query: 181 EILQRTK 185
           EILQRTK
Sbjct: 181 EILQRTK 170

[Close]

BLAST of IVF0008053 vs. TAIR 10
Match: AT4G01790.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 141.0 bits (354), Expect = 9.8e-34
Identity = 85/165 (51.52%), Postives = 103/165 (62.42%), Query Frame = 0


Query: 22  DSYEGERLDELLLSIQREIKTARGLNAESLPEKIWLK--YAIGVNEVTRALERMTPCGDS 81
           D YEGERL  LL  IQR I+T++  N  SLPEKIWLK   AIG+NEVTR LERM P   S
Sbjct: 24  DYYEGERLTHLLDLIQRGIETSKLSNVNSLPEKIWLKKQIAIGINEVTRVLERMNPNNTS 83

Query: 82  ARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVP 141
            +  NP       +LQVV                 +L A+C PR LT H+P LA SR VP
Sbjct: 84  DQQQNPK------QLQVV-----------------ILVADCKPRMLTKHIPNLAASRNVP 143

Query: 142 LILVKD-KEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQR 184
           ++ V+D K  SLRLGELV LKTA+AIGIK+ G+ +N L+ +IL R
Sbjct: 144 VLYVRDNKRASLRLGELVKLKTALAIGIKARGNDLNLLLKQILPR 165

The following BLAST results are available for this feature:

BLAST of IVF0008053 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0008053 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CS63	4.8e-97	98.39	uncharacterized protein LOC103503720 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CQU5	6.3e-97	97.86	uncharacterized protein LOC103503720 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CS60	1.6e-95	97.34	uncharacterized protein LOC103503720 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4E613	4.3e-85	97.06	uncharacterized protein LOC103503720 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CR39	1.4e-83	88.77	ribonuclease P protein subunit p38 isoform X6 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]

BLAST of IVF0008053 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466271.1	2.63e-126	98.39	PREDICTED: uncharacterized protein LOC103503720 isoform X3 [Cucumis melo]	[more]
XP_008466263.1	3.88e-126	97.86	PREDICTED: uncharacterized protein LOC103503720 isoform X2 [Cucumis melo]	[more]
XP_008466254.1	2.71e-124	97.34	PREDICTED: uncharacterized protein LOC103503720 isoform X1 [Cucumis melo]	[more]
XP_016903668.1	8.73e-111	97.06	PREDICTED: uncharacterized protein LOC103503720 isoform X4 [Cucumis melo]	[more]
XP_008466288.1	1.47e-108	88.77	PREDICTED: ribonuclease P protein subunit p38 isoform X6 [Cucumis melo]	[more]

BLAST of IVF0008053 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01790.1	9.8e-34	51.52	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004038	Ribosomal protein L7Ae/L30e/S12e/Gadd45	PFAM	PF01248	Ribosomal_L7Ae	coord: 114..171 e-value: 7.0E-6 score: 25.7
IPR029064	50S ribosomal protein L30e-like	GENE3D	3.30.1330.30		coord: 22..185 e-value: 5.5E-19 score: 70.4
IPR029064	50S ribosomal protein L30e-like	SUPERFAMILY	55315	L30e-like	coord: 58..183
None	No IPR available	PANTHER	PTHR47903	OS07G0636400 PROTEIN	coord: 8..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0008053.5	IVF0008053.5	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0043232	intracellular non-membrane-bounded organelle