IVF0008000 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAGGAGGAAAAGATGAAGTTGATGAGGATTATGTCTTCAAGTTCATGGACATTTTCATATGTAAGTCTTTGGAGAATGGAATTGAACATATAATCTAGTGGCAAAGACACCTACAACATATGCATTTTCAAAGTCAAAGAAAATTAAACGATTTAGAGTTGAAGATGGACAACACAAACGTAAACAATGAGGCACAATTACATCAACTTAAAAGAAAAATAACAAGACTCAAAATGCAGAATCAGGATTTCCAAAAGCAACTTCTTGCTATGAGGGAGAAAACTGAGGCGATGAGGGAATAG ATGAGAGGAGGAAAAGATGAAGTTGATGAGGATTATGTCTTCAAGTTCATGGACATTTTCATATGTAAGTCTTTGGAGAATGGAATTGAACATATAATCTATCAAAGAAAATTAAACGATTTAGAGTTGAAGATGGACAACACAAACGTAAACAATGAGGCACAATTACATCAACTTAAAAGAAAAATAACAAGACTCAAAATGCAGAATCAGGATTTCCAAAAGCAACTTCTTGCTATGAGGGAGAAAACTGAGGCGATGAGGGAATAG ATGAGAGGAGGAAAAGATGAAGTTGATGAGGATTATGTCTTCAAGTTCATGGACATTTTCATATGTAAGTCTTTGGAGAATGGAATTGAACATATAATCTATCAAAGAAAATTAAACGATTTAGAGTTGAAGATGGACAACACAAACGTAAACAATGAGGCACAATTACATCAACTTAAAAGAAAAATAACAAGACTCAAAATGCAGAATCAGGATTTCCAAAAGCAACTTCTTGCTATGAGGGAGAAAACTGAGGCGATGAGGGAATAG MRGGKDEVDEDYVFKFMDIFICKSLENGIEHIIYQRKLNDLELKMDNTNVNNEAQLHQLKRKITRLKMQNQDFQKQLLAMREKTEAMRE Homology
BLAST of IVF0008000 vs. ExPASy TrEMBL
Match: A0A5D3C5U6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G001830 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.9e-06 Identity = 33/96 (34.38%), Postives = 56/96 (58.33%), Query Frame = 0
BLAST of IVF0008000 vs. ExPASy TrEMBL
Match: A0A5A7VEP3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G001430 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 3.2e-06 Identity = 26/33 (78.79%), Postives = 31/33 (93.94%), Query Frame = 0
BLAST of IVF0008000 vs. ExPASy TrEMBL
Match: A0A5D3BTN1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00190 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 3.2e-06 Identity = 26/33 (78.79%), Postives = 31/33 (93.94%), Query Frame = 0
BLAST of IVF0008000 vs. ExPASy TrEMBL
Match: A0A5D3D645 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold368G00010 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 5.5e-06 Identity = 35/92 (38.04%), Postives = 56/92 (60.87%), Query Frame = 0
BLAST of IVF0008000 vs. ExPASy TrEMBL
Match: A0A5A7V749 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold828G00390 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.9e-04 Identity = 30/85 (35.29%), Postives = 45/85 (52.94%), Query Frame = 0
BLAST of IVF0008000 vs. NCBI nr
Match: KAA0049656.1 (hypothetical protein E6C27_scaffold163G001250 [Cucumis melo var. makuwa] >TYK19034.1 hypothetical protein E5676_scaffold368G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 62.4 bits (150), Expect = 2.72e-10 Identity = 33/77 (42.86%), Postives = 49/77 (63.64%), Query Frame = 0
BLAST of IVF0008000 vs. NCBI nr
Match: TYK07283.1 (hypothetical protein E5676_scaffold606G001830 [Cucumis melo var. makuwa]) HSP 1 Score: 63.2 bits (152), Expect = 1.07e-09 Identity = 33/96 (34.38%), Postives = 56/96 (58.33%), Query Frame = 0
BLAST of IVF0008000 vs. NCBI nr
Match: KAA0064201.1 (hypothetical protein E6C27_scaffold548G001430 [Cucumis melo var. makuwa]) HSP 1 Score: 62.4 bits (150), Expect = 1.86e-09 Identity = 26/33 (78.79%), Postives = 31/33 (93.94%), Query Frame = 0
BLAST of IVF0008000 vs. NCBI nr
Match: TYK02827.1 (hypothetical protein E5676_scaffold218G00190 [Cucumis melo var. makuwa]) HSP 1 Score: 62.4 bits (150), Expect = 2.36e-09 Identity = 26/33 (78.79%), Postives = 31/33 (93.94%), Query Frame = 0
BLAST of IVF0008000 vs. NCBI nr
Match: KAA0063408.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK11667.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 55.5 bits (132), Expect = 1.73e-06 Identity = 30/85 (35.29%), Postives = 45/85 (52.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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