IVF0007993 (gene) Melon (IVF77) v1

Overview
NameIVF0007993
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr04: 8915294 .. 8915530 (-)
RNA-Seq ExpressionIVF0007993
SyntenyIVF0007993
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCCTAGACCTAAATGTTGATAGAAACGATATTGAAGCTGGCCAAGAAGAAGAATTCGCAGACTCGATGGTAAATGCATCAGAGGTCCCCATTGAAGATGTTGGGGTCTTCGTTATGCCCATGGATTGTAGCGATGTTGAAGATGGTGTGCCACCTTTTCAATCCTTCCATCTAACGAACTACAATTCAAAGAGTTGTGTTTCAACATACAAAGCTTTACCACTTCTACCATGA

mRNA sequence

ATGGTCCTAGACCTAAATGTTGATAGAAACGATATTGAAGCTGGCCAAGAAGAAGAATTCGCAGACTCGATGGTAAATGCATCAGAGGTCCCCATTGAAGATGTTGGGGTCTTCGTTATGCCCATGGATTGTAGCGATGTTGAAGATGGTGTGCCACCTTTTCAATCCTTCCATCTAACGAACTACAATTCAAAGAGTTGTGTTTCAACATACAAAGCTTTACCACTTCTACCATGA

Coding sequence (CDS)

ATGGTCCTAGACCTAAATGTTGATAGAAACGATATTGAAGCTGGCCAAGAAGAAGAATTCGCAGACTCGATGGTAAATGCATCAGAGGTCCCCATTGAAGATGTTGGGGTCTTCGTTATGCCCATGGATTGTAGCGATGTTGAAGATGGTGTGCCACCTTTTCAATCCTTCCATCTAACGAACTACAATTCAAAGAGTTGTGTTTCAACATACAAAGCTTTACCACTTCTACCATGA

Protein sequence

MVLDLNVDRNDIEAGQEEEFADSMVNASEVPIEDVGVFVMPMDCSDVEDGVPPFQSFHLTNYNSKSCVSTYKALPLLP
Homology
BLAST of IVF0007993 vs. ExPASy TrEMBL
Match: A0A5D3DTY6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G00110 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.5e-10
Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 0

Query: 1   MVLDLNVDRNDIEAGQEEEFADSMVNASEVPIEDVGVFVMPMDCSDVEDGVPPF 55
           ++LDL+  RNDIEA Q+EE   +MV+ASEV IED  +FV+PMD SDVEDGVPPF
Sbjct: 110 VILDLDAVRNDIEADQQEELVGAMVDASEVSIEDAWIFVVPMDYSDVEDGVPPF 163

BLAST of IVF0007993 vs. ExPASy TrEMBL
Match: A0A5D3BBP1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001970 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.2e-06
Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 0

Query: 6  NVDRNDIEAGQEEEFADSMVNASEVPIEDVGVFVMPMDCSDVEDGVPPF 55
          + +RNDI+A Q EE  D  V+AS+VPIED+ + V+PMDCSDV+DG+ PF
Sbjct: 45 DANRNDIQADQ-EELVDPTVDASKVPIEDIRILVVPMDCSDVQDGMSPF 92

BLAST of IVF0007993 vs. NCBI nr
Match: KAA0048578.1 (hypothetical protein E6C27_scaffold61G002170 [Cucumis melo var. makuwa] >TYK27166.1 hypothetical protein E5676_scaffold236G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 72.8 bits (177), Expect = 7.70e-13
Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 0

Query: 1   MVLDLNVDRNDIEAGQEEEFADSMVNASEVPIEDVGVFVMPMDCSDVEDGVPPF 54
           ++LDL+  RNDIEA Q+EE   +MV+ASEV IED  +FV+PMD SDVEDGVPPF
Sbjct: 110 VILDLDAVRNDIEADQQEELVGAMVDASEVSIEDAWIFVVPMDYSDVEDGVPPF 163

BLAST of IVF0007993 vs. NCBI nr
Match: KAA0036828.1 (hypothetical protein E6C27_scaffold20G001290 [Cucumis melo var. makuwa] >TYJ95895.1 hypothetical protein E5676_scaffold110G001970 [Cucumis melo var. makuwa])

HSP 1 Score: 60.1 bits (144), Expect = 4.35e-09
Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 0

Query: 6  NVDRNDIEAGQEEEFADSMVNASEVPIEDVGVFVMPMDCSDVEDGVPPF 54
          + +RNDI+A QE E  D  V+AS+VPIED+ + V+PMDCSDV+DG+ PF
Sbjct: 45 DANRNDIQADQE-ELVDPTVDASKVPIEDIRILVVPMDCSDVQDGMSPF 92

BLAST of IVF0007993 vs. NCBI nr
Match: KAA0036741.1 (hypothetical protein E6C27_scaffold20G00180 [Cucumis melo var. makuwa] >TYJ95808.1 hypothetical protein E5676_scaffold110G00910 [Cucumis melo var. makuwa])

HSP 1 Score: 50.4 bits (119), Expect = 3.93e-05
Identity = 24/50 (48.00%), Postives = 36/50 (72.00%), Query Frame = 0

Query: 5   LNVDRNDIEAGQEEEFADSMVNASEVPIEDVGVFVMPMDCSDVEDGVPPF 54
           LN ++NDIE+GQEEE ++  ++  EV        ++P+DCS+VEDG+PPF
Sbjct: 116 LNANKNDIESGQEEESSNPTIDTLEV-------LIVPIDCSNVEDGMPPF 158

BLAST of IVF0007993 vs. NCBI nr
Match: KAA0035141.1 (hypothetical protein E6C27_scaffold57G002260 [Cucumis melo var. makuwa])

HSP 1 Score: 48.9 bits (115), Expect = 1.39e-04
Identity = 29/54 (53.70%), Postives = 36/54 (66.67%), Query Frame = 0

Query: 1   MVLDLNVDRNDIEAGQEEEFADSMVNASEVPIEDVGVFVM-PMDCSDVEDGVPP 53
           MV  ++ DRND EAG  EE  + +V+  EV  EDV  F + PMDCS +EDGVPP
Sbjct: 122 MVPSVDADRNDNEAG--EESINLVVDTLEVSSEDVEFFALVPMDCSSIEDGVPP 173

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DTY62.5e-1066.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BBP12.2e-0659.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0048578.17.70e-1366.67hypothetical protein E6C27_scaffold61G002170 [Cucumis melo var. makuwa] >TYK2716... [more]
KAA0036828.14.35e-0959.18hypothetical protein E6C27_scaffold20G001290 [Cucumis melo var. makuwa] >TYJ9589... [more]
KAA0036741.13.93e-0548.00hypothetical protein E6C27_scaffold20G00180 [Cucumis melo var. makuwa] >TYJ95808... [more]
KAA0035141.11.39e-0453.70hypothetical protein E6C27_scaffold57G002260 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0007993.1IVF0007993.1mRNA