IVF0007960 (gene) Melon (IVF77) v1

Overview


Name	IVF0007960
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	RING-type E3 ubiquitin transferase
Location	chr10: 6401431 .. 6402580 (-)
RNA-Seq Expression	IVF0007960
Synteny	IVF0007960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCCATGGCGGCGGCGTCTTCCTACTGGTGTTACCGATGCAGTCACTTTGTTAGGGTTTCTAATCAGGATTCAGTTGTGTGCCCTGATTGTAATAGTGGATTCGTTGAACAGATCGAACAGCCATCGAGGTTGGTGAACGTGGAGGCGGCACCGCGGAGGAGGTTTCCGGCTGCGGCGATGTATATGATCGGCAACCGCTCGAATTCGGGGCAGAATTTGGGATCTGGGCTGAGGAGATCTCGGAGGAATGGAGGGGATCGCTCCCCTTTTAATCCTGTGATTGTTCTTCGTGGGCCGTCTGATGGGAGTGAAGCTGGAGAAAGTCGTCGGTTTGAGCTTTATTATGATGATGGTGGTGGTTCTGGCCTGAGACCTCTGCCACCGAGTATGTCCGAGTTTTTGTTGGGGTCTGGGTTTGATAGGCTTCTGGAACAACTTTCTCAGATTGAAATGAACGGTATTGGGCGGTTTGAGAATCCGCCGGCGTCAAAGGCTGCTATTGAATCAATGCCCACTATTCAAATCTGTGAAAATCATTTGGCAACTGAGTCACACTGTGCTGTTTGCAAAGAAGCATTCGAATTGGGAAACGAAGCTCGGGAGATGCCCTGTAAGCATATTATCATTGTGATTGTATTCTACCTTGGCTTTCCCTTCGAAATTCTTGTCCAGTTTGTCGCCATGAATTGCCATCTGATAATCAGAACTCTCTGGATGCTGCTGAAAGTGGCGAAAATGGGGGATCTGTGACCTCGAATGGGGAGGAGAATGTTGGCTTAACCATTTGGAGGTTACCGGGTGGGGGTTTGCGGTAGGGCGGTTTCATGGCGGCAGAAGAGGTGGGGAGAGAGAGCTTCCGGTTGTTTACACTGAAGTGGATGGTGGTTTTACTAATGGTGGTCTTCCCAGAAGAGTATCATTTGCTTCGAGAGGCAGGGGTAGGGAGAGAGGCGGGTGGGGCCGAATGATTCGCAATATGTTTGCTTGCTTTGGCGGATCAATGAGGTCAATTGCATCTACTTCAAACTCCACAAGTGATTCTGGTCCTTCGAGGAGTAGTAGACCACTCCCACATTTCAATAGCGAGCCAAGGAGACGGCGCACATGGTCTATGGAGGTTAACAGTGGAACAATCAGCTGGTGA

mRNA sequence

ATGTCGTCCATGGCGGCGGCGTCTTCCTACTGGTGTTACCGATGCAGTCACTTTGTTAGGGTTTCTAATCAGGATTCAGTTGTGTGCCCTGATTGTAATAGTGGATTCGTTGAACAGATCGAACAGCCATCGAGGTTGGTGAACGTGGAGGCGGCACCGCGGAGGAGGTTTCCGGCTGCGGCGATGTATATGATCGGCAACCGCTCGAATTCGGGGCAGAATTTGGGATCTGGGCTGAGGAGATCTCGGAGGAATGGAGGGGATCGCTCCCCTTTTAATCCTGTGATTGTTCTTCGTGGGCCGTCTGATGGGAGTGAAGCTGGAGAAAGTCGTCGGTTTGAGCTTTATTATGATGATGGTGGTGGTTCTGGCCTGAGACCTCTGCCACCGAGTATGTCCGAGTTTTTGTTGGGGTCTGGGTTTGATAGGCTTCTGGAACAACTTTCTCAGATTGAAATGAACGGTATTGGGCGGTTTGAGAATCCGCCGGCGTCAAAGGCTGCTATTGAATCAATGCCCACTATTCAAATCTGTGAAAATCATTTGGCAACTGAGTCACACTCATATTATCATTGTGATTGTATTCTACCTTGGCTTTCCCTTCGAAATTCTTGTCCAGTTTGTCGCCATGAATTGCCATCTGATAATCAGAACTCTCTGGATGCTGCTGAAAGTGGCGAAAATGGGGGATCTGTGACCTCGAATGGGGAGGAGAATGTTGGCTTAACCATTTGGAGGTTACCGGGTGGGGGTGGGGAGAGAGAGCTTCCGGTTGTTTACACTGAAGTGGATGGTGGTTTTACTAATGGTGGTCTTCCCAGAAGAGTATCATTTGCTTCGAGAGGCAGGGGTAGGGAGAGAGGCGGGTGGGGCCGAATGATTCGCAATATGTTTGCTTGCTTTGGCGGATCAATGAGGTCAATTGCATCTACTTCAAACTCCACAAGTGATTCTGGTCCTTCGAGGAGTAGTAGACCACTCCCACATTTCAATAGCGAGCCAAGGAGACGGCGCACATGGTCTATGGAGGTTAACAGTGGAACAATCAGCTGGTGA

Coding sequence (CDS)

ATGTCGTCCATGGCGGCGGCGTCTTCCTACTGGTGTTACCGATGCAGTCACTTTGTTAGGGTTTCTAATCAGGATTCAGTTGTGTGCCCTGATTGTAATAGTGGATTCGTTGAACAGATCGAACAGCCATCGAGGTTGGTGAACGTGGAGGCGGCACCGCGGAGGAGGTTTCCGGCTGCGGCGATGTATATGATCGGCAACCGCTCGAATTCGGGGCAGAATTTGGGATCTGGGCTGAGGAGATCTCGGAGGAATGGAGGGGATCGCTCCCCTTTTAATCCTGTGATTGTTCTTCGTGGGCCGTCTGATGGGAGTGAAGCTGGAGAAAGTCGTCGGTTTGAGCTTTATTATGATGATGGTGGTGGTTCTGGCCTGAGACCTCTGCCACCGAGTATGTCCGAGTTTTTGTTGGGGTCTGGGTTTGATAGGCTTCTGGAACAACTTTCTCAGATTGAAATGAACGGTATTGGGCGGTTTGAGAATCCGCCGGCGTCAAAGGCTGCTATTGAATCAATGCCCACTATTCAAATCTGTGAAAATCATTTGGCAACTGAGTCACACTCATATTATCATTGTGATTGTATTCTACCTTGGCTTTCCCTTCGAAATTCTTGTCCAGTTTGTCGCCATGAATTGCCATCTGATAATCAGAACTCTCTGGATGCTGCTGAAAGTGGCGAAAATGGGGGATCTGTGACCTCGAATGGGGAGGAGAATGTTGGCTTAACCATTTGGAGGTTACCGGGTGGGGGTGGGGAGAGAGAGCTTCCGGTTGTTTACACTGAAGTGGATGGTGGTTTTACTAATGGTGGTCTTCCCAGAAGAGTATCATTTGCTTCGAGAGGCAGGGGTAGGGAGAGAGGCGGGTGGGGCCGAATGATTCGCAATATGTTTGCTTGCTTTGGCGGATCAATGAGGTCAATTGCATCTACTTCAAACTCCACAAGTGATTCTGGTCCTTCGAGGAGTAGTAGACCACTCCCACATTTCAATAGCGAGCCAAGGAGACGGCGCACATGGTCTATGGAGGTTAACAGTGGAACAATCAGCTGGTGA

Protein sequence

MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAAAMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICENHLATESHSYYHCDCILPWLSLRNSCPVCRHELPSDNQNSLDAAESGENGGSVTSNGEENVGLTIWRLPGGGGERELPVVYTEVDGGFTNGGLPRRVSFASRGRGRERGGWGRMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLPHFNSEPRRRRTWSMEVNSGTISW

Homology

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BLAST of IVF0007960 vs. ExPASy Swiss-Prot
Match: O22283 (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 4.7e-66
Identity = 179/407 (43.98%), Postives = 233/407 (57.25%), Query Frame = 0


Query: 6   AASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQP----------SRLVNVEAAPRR 65
           A+ SYWCY CS FV VS  DS+ CPDC+ GF+E I++P          +       +P R
Sbjct: 2   ASGSYWCYSCSRFVWVS--DSISCPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSPTR 61

Query: 66  RFPAAAMYMIGNRSNSGQNLGSG--LRRSRRNGGDRSPFNPVIVLRG----PSDG--SEA 125
             P ++     + S    N  +   + R+R N   RSP NPVIVLRG    PS    SE 
Sbjct: 62  FPPPSSSSSTPSASMHADNSPTPTIVTRTRSN---RSP-NPVIVLRGSAAAPSSDVVSEG 121

Query: 126 GESRRFELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN---GIGRFENPPA 185
            +   F++YYDDG  SGLRPLPPSM+EFLLGSGFDRLL+Q+SQIE+N    +   E+PPA
Sbjct: 122 LDRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPA 181

Query: 186 SKAAIESMPTIQICENHLATESHSY----------------------YHCDCILPWLSLR 245
           SK+AIE++P I+I   HL ++S S+                      YH DCILPWL++R
Sbjct: 182 SKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIR 241

Query: 246 NSCPVCRHELPSDNQNSLDAAESGENGGSVTSNGEEN--VGLTIWRLPGG---------- 305
           NSCPVCRHELP+++    D   +     + T+  EE+   GLTIWRLPGG          
Sbjct: 242 NSCPVCRHELPAEDLT--DGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGG 301

Query: 306 --GGERELPVVYTEVDGG-FTNGGLPRRVSFASR------GRGRERGGW--GRMIRNMFA 341
             GG+R +PVVYTEVDGG   +  LPRRV++ SR      G  RERGG   GR++R +F 
Sbjct: 302 WRGGDRMMPVVYTEVDGGRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGRIMR-LFG 361

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BLAST of IVF0007960 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.2e-58
Identity = 172/415 (41.45%), Postives = 212/415 (51.08%), Query Frame = 0


Query: 8   SSYWCYRCSHFVRV------SNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAAA 67
           +SYWCY C+ FV V      +   SV CP C+ GF+EQI   S      AA     PA+ 
Sbjct: 16  ASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSS-----SAATELTIPAST 75

Query: 68  MYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGES-------RRFE 127
                N      N  S +R  RR  G R  FNPVIVL+G +   E GE        R FE
Sbjct: 76  EVRSIN-----NNRRSVIR--RRRSGRRPSFNPVIVLQGGAGEREEGEEGDAARDRRAFE 135

Query: 128 LYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN--GIGRFENPPASKAAIESM 187
            YYDDG GSGLRPLP S+SE L+GSGF+RLLEQLSQIE +  GIGR  NPPASK+AIES+
Sbjct: 136 FYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESL 195

Query: 188 PTIQICENHLATESH--------------------SYYHCDCILPWLSLRNSCPVCRHEL 247
           P ++I + H+ +E++                      +H DCI+PWLS+RNSCPVCR EL
Sbjct: 196 PRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFEL 255

Query: 248 PSD-NQNSLDAAESGENGGSVTSNGEEN-VGLTIWRLPGGG------------GERELPV 307
           PS+ N+ S              +N E+N VG+TIWRLPGGG            GER LPV
Sbjct: 256 PSEPNRRS-------------NNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPV 315

Query: 308 VYTEVDGGFTNGGL--PRRVSFA---------SRGRGRERGGWG---RMIRNMFACF--- 350
           V TE+DGG        PRR+S+          S G G   G  G   RM+R M +     
Sbjct: 316 VLTEMDGGGIGNSQDGPRRISWVRSHGTLESDSNGTGSGSGSGGRLRRMVRGMVSLMRRV 375

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BLAST of IVF0007960 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.9e-54
Identity = 163/392 (41.58%), Postives = 209/392 (53.32%), Query Frame = 0


Query: 8   SSYWCYRCSHFVRV-SNQDS---VVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAAAMY 67
           +SYWCY C+ F+ V  +QD+   V+CP CN GF+E+IE  S    V A P      A+  
Sbjct: 29  TSYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSN-STVAAIP------ASTP 88

Query: 68  MIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDG-------SEAG-----ESR 127
            + +   + +++   +RR R N   R+ FNPVIVL G   G       +E G     E R
Sbjct: 89  EVRSVEETHRSI---IRRRRSN--RRTSFNPVIVLHGGGGGGAGERVENEEGDGATRERR 148

Query: 128 RFELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEM--NGIGRFENPPASKAAI 187
            +E YYDDG GSGLRPLP S+SE L+GSGF+RLLEQLSQIE   NGIGR  NPPASK+AI
Sbjct: 149 AYEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAI 208

Query: 188 ESMPTIQICENHLATESH--------------------SYYHCDCILPWLSLRNSCPVCR 247
           ES+P ++I + H   E++                      +H DCI+PWLS+RNSCPVCR
Sbjct: 209 ESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCR 268

Query: 248 HELPSDNQNSLDAAESGENGGSVTSNGEEN-VGLTIWRLPGGG------------GEREL 307
            ELPSD                  SN EE+ VG+TIWRLPGGG            GER L
Sbjct: 269 FELPSDPIQ--------------RSNEEEHAVGMTIWRLPGGGFAVGRFNAGVREGERIL 328

Query: 308 PVVYTEVDGG--FTNGGLPRRVSFA--------SRGRGRERGG--WGRMIRNMFACFGGS 337
           PVV TE+DGG   +N G PRR+S+         SR  GR   G    R +R M +     
Sbjct: 329 PVVLTEMDGGGLGSNEG-PRRISWVRAHETPEMSRNGGRSGNGGRLRRAVRGMVSFMRRV 388

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BLAST of IVF0007960 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.8e-20
Identity = 80/309 (25.89%), Postives = 139/309 (44.98%), Query Frame = 0


Query: 10  YWCYRCSHFVRVSNQDSV--VCPDCNSGFVEQIEQPSRLVNVEAAPRRR---FPAAAMY- 69
           ++CY+C+  V +S   S    CP CN GF+E+ E P+   ++   P      FP A  + 
Sbjct: 21  FFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMADPFS 80

Query: 70  -----MIGNRSNSGQNL------GSGLR---RSRRNGGDRSPFNPVIVLRGPSDGSEAGE 129
                + G+ + +   +      G  ++   RS +       F+P   L+     +    
Sbjct: 81  TLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQ-TLRSS 140

Query: 130 SRRFELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAI 189
              FE   ++        +P +  ++  G G ++L++QL++ + N   R+  PPASK+AI
Sbjct: 141 GTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPN---RYGTPPASKSAI 200

Query: 190 ESMPTIQICENHLATESHS---------------------YYHCDCILPWLSLRNSCPVC 249
           +++PT+++ ++ L +E +                       +H DC+LPWL L NSCPVC
Sbjct: 201 DALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVC 260

Query: 250 RHELPSDN----QNSLDAAESGENGGSVTSNGEENVGLTIWRLPGGGGERELPVVYTEVD 274
           R ELP+D+      S  +  SG+  GSV   G++    +I          +LP  +   D
Sbjct: 261 RFELPTDDPDYENRSQGSQGSGDGQGSV--EGQQTPRFSI----------QLPWPFRRQD 313

[Close]

BLAST of IVF0007960 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.7e-20
Identity = 72/282 (25.53%), Postives = 131/282 (46.45%), Query Frame = 0


Query: 10  YWCYRCSHFVRVS---NQDSVVCPDCNSGFVEQIEQPS-------RLVNVEAAPRR---- 69
           ++CY+C+  V V+         CP CN GF+E+ + P+          N  + P      
Sbjct: 23  FFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNSIPFHDLFL 82

Query: 70  ------------RFPAAAMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSD 129
                        FP+++     + ++   N  S    +R   GD   F+P   ++   +
Sbjct: 83  TLSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSLSGPTRSGRGDPFAFDPFTFIQNHLN 142

Query: 130 GSEAGESRRFELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPP 189
              +  ++   +  ++    G R LP ++ ++ +G G ++L++QL++ + N   R+  PP
Sbjct: 143 DLRSSGAQIEFVIQNNPSDQGFR-LPANIGDYFIGPGLEQLIQQLAENDPN---RYGTPP 202

Query: 190 ASKAAIESMPTIQICENHLATESHS---------------------YYHCDCILPWLSLR 242
           ASK+AIE++P + I +++L +E +                       YH DC+LPWL L 
Sbjct: 203 ASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELH 262

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BLAST of IVF0007960 vs. ExPASy TrEMBL
Match: A0A5A7UA14 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00480 PE=4 SV=1)

HSP 1 Score: 687.2 bits (1772), Expect = 3.6e-194
Identity = 349/383 (91.12%), Postives = 349/383 (91.12%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA 60
           MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA
Sbjct: 1   MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120
           AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG
Sbjct: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 HLATESH--------------------SYYHCDCILPWLSLRNSCPVCRHELPSDNQNSL 240
           HLATESH                      YHCDCILPWLSLRNSCPVCRHELPSDNQNSL
Sbjct: 181 HLATESHCAVCKEAFELGNEAREMPCKHIYHCDCILPWLSLRNSCPVCRHELPSDNQNSL 240

Query: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGG------------GGERELPVVYTEVDGGFT 300
           DAAESGENGGSVTSNGEENVGLTIWRLPGG            GGERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGLPRRVSFASRGRGRERGGWGRMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 352
           NGGLPRRVSFASRGRGRERGGWGRMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP
Sbjct: 301 NGGLPRRVSFASRGRGRERGGWGRMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 360

[Close]

BLAST of IVF0007960 vs. ExPASy TrEMBL
Match: A0A1S3CGL6 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103500230 PE=4 SV=1)

HSP 1 Score: 687.2 bits (1772), Expect = 3.6e-194
Identity = 349/383 (91.12%), Postives = 349/383 (91.12%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA 60
           MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA
Sbjct: 1   MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120
           AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG
Sbjct: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 HLATESH--------------------SYYHCDCILPWLSLRNSCPVCRHELPSDNQNSL 240
           HLATESH                      YHCDCILPWLSLRNSCPVCRHELPSDNQNSL
Sbjct: 181 HLATESHCAVCKEAFELGNEAREMPCKHIYHCDCILPWLSLRNSCPVCRHELPSDNQNSL 240

Query: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGG------------GGERELPVVYTEVDGGFT 300
           DAAESGENGGSVTSNGEENVGLTIWRLPGG            GGERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGLPRRVSFASRGRGRERGGWGRMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 352
           NGGLPRRVSFASRGRGRERGGWGRMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP
Sbjct: 301 NGGLPRRVSFASRGRGRERGGWGRMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 360

[Close]

BLAST of IVF0007960 vs. ExPASy TrEMBL
Match: A0A0A0KLW4 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_5G182680 PE=4 SV=1)

HSP 1 Score: 675.6 bits (1742), Expect = 1.1e-190
Identity = 343/383 (89.56%), Postives = 347/383 (90.60%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA 60
           MSSMAAASSYWC+RCSHFVRVSNQDSVVCPDCNSGFVEQIE PSRLVNVEAAPRRRFPAA
Sbjct: 1   MSSMAAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120
           AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG
Sbjct: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 HLATESH--------------------SYYHCDCILPWLSLRNSCPVCRHELPSDNQNSL 240
           +LATESH                      YHCDCILPWLS+RNSCPVCRHELPSDNQNSL
Sbjct: 181 YLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSDNQNSL 240

Query: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGG------------GGERELPVVYTEVDGGFT 300
           DAAESGENGGSVTSNGEENVGLTIWRLPGG            GGERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGLPRRVSFASRGRGRERGGWGRMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 352
           NGGLPRRVSFASRGRGRERG WG+MIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP
Sbjct: 301 NGGLPRRVSFASRGRGRERGRWGQMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 360

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BLAST of IVF0007960 vs. ExPASy TrEMBL
Match: A0A6J1CAT7 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111009972 PE=4 SV=1)

HSP 1 Score: 646.4 bits (1666), Expect = 7.1e-182
Identity = 327/383 (85.38%), Postives = 338/383 (88.25%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA 60
           MSSMAAASSYWCYRCS FVRVSNQDSVVCPDCNSGFVEQIE PSRLVNVEAAPRRRFPAA
Sbjct: 1   MSSMAAASSYWCYRCSRFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120
           AMYMIG+RSNSGQNLGSGLRRSRRNGGDRS FNPVIVLRGPSDGSE GESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGQNLGSGLRRSRRNGGDRSQFNPVIVLRGPSDGSEGGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 HLATESH--------------------SYYHCDCILPWLSLRNSCPVCRHELPSDNQNSL 240
           HL TESH                      YH DCILPWLS+RNSCPVCRHELPSDNQNS 
Sbjct: 181 HLETESHCAVCKEAFELGNEAREMPCKHIYHSDCILPWLSIRNSCPVCRHELPSDNQNSP 240

Query: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGG------------GGERELPVVYTEVDGGFT 300
           DAAESGENGG VTSNGEENVGLTIWRLPGG            GGERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENGGPVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGLPRRVSFASRGRGRERGGWGRMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 352
           NGG+PRRVSFASRGRGRERGGW R++RN+FACFGGSMRS ASTS+S +DSGPSRSSRPLP
Sbjct: 301 NGGVPRRVSFASRGRGRERGGWSRILRNLFACFGGSMRSTASTSSSPTDSGPSRSSRPLP 360

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BLAST of IVF0007960 vs. ExPASy TrEMBL
Match: A0A6J1JEE7 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111485043 PE=4 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 1.1e-177
Identity = 319/383 (83.29%), Postives = 334/383 (87.21%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA 60
           MSSMAAASSYWCYRCS FVRV NQDSVVCPDCNSGF+EQIE PSRLV+VE+APRRRFPAA
Sbjct: 1   MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA 60

Query: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120
           AMYMIG+RSNSGQNLGSG+RR RRNGGDRSPFNPVIVLRGPSDGSE GESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFE+PPASKAAIESMPTI+ICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN 180

Query: 181 HLATESH--------------------SYYHCDCILPWLSLRNSCPVCRHELPSDNQNSL 240
           HL TESH                      YH DCILPWLS+RNSCPVCRHELPSDNQNS 
Sbjct: 181 HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP 240

Query: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGG------------GGERELPVVYTEVDGGFT 300
           DAAESGEN GSV SNGEENVGLT+WRLPGG            GGERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENEGSVASNGEENVGLTVWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGLPRRVSFASRGRGRERGGWGRMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 352
           NGG+PRR+SFASRGRGRERGGW R+IRNMFACF GSMRS++STSNST DSG SRSSRPLP
Sbjct: 301 NGGVPRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDSGSSRSSRPLP 360

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BLAST of IVF0007960 vs. NCBI nr
Match: XP_008461689.1 (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >KAA0050339.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa] >TYK03553.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa])

HSP 1 Score: 685 bits (1767), Expect = 1.11e-247
Identity = 349/383 (91.12%), Postives = 349/383 (91.12%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA 60
           MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA
Sbjct: 1   MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120
           AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG
Sbjct: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 HLATESHS--------------------YYHCDCILPWLSLRNSCPVCRHELPSDNQNSL 240
           HLATESH                      YHCDCILPWLSLRNSCPVCRHELPSDNQNSL
Sbjct: 181 HLATESHCAVCKEAFELGNEAREMPCKHIYHCDCILPWLSLRNSCPVCRHELPSDNQNSL 240

Query: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGG------------GERELPVVYTEVDGGFT 300
           DAAESGENGGSVTSNGEENVGLTIWRLPGGG            GERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGLPRRVSFASRGRGRERGGWGRMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 351
           NGGLPRRVSFASRGRGRERGGWGRMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP
Sbjct: 301 NGGLPRRVSFASRGRGRERGGWGRMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 360

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BLAST of IVF0007960 vs. NCBI nr
Match: XP_004147682.1 (probable E3 ubiquitin-protein ligase RHC2A [Cucumis sativus] >KGN50563.1 hypothetical protein Csa_021458 [Cucumis sativus])

HSP 1 Score: 673 bits (1737), Expect = 4.12e-243
Identity = 343/383 (89.56%), Postives = 347/383 (90.60%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA 60
           MSSMAAASSYWC+RCSHFVRVSNQDSVVCPDCNSGFVEQIE PSRLVNVEAAPRRRFPAA
Sbjct: 1   MSSMAAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120
           AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG
Sbjct: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 HLATESHS--------------------YYHCDCILPWLSLRNSCPVCRHELPSDNQNSL 240
           +LATESH                      YHCDCILPWLS+RNSCPVCRHELPSDNQNSL
Sbjct: 181 YLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSDNQNSL 240

Query: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGG------------GERELPVVYTEVDGGFT 300
           DAAESGENGGSVTSNGEENVGLTIWRLPGGG            GERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGLPRRVSFASRGRGRERGGWGRMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 351
           NGGLPRRVSFASRGRGRERG WG+MIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP
Sbjct: 301 NGGLPRRVSFASRGRGRERGRWGQMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 360

[Close]

BLAST of IVF0007960 vs. NCBI nr
Match: XP_038890198.1 (probable E3 ubiquitin-protein ligase RHC2A [Benincasa hispida])

HSP 1 Score: 657 bits (1696), Expect = 7.29e-237
Identity = 332/383 (86.68%), Postives = 345/383 (90.08%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA 60
           MSSMAAASSYWCYRCS FVRVSNQDSVVCPDCNSGF+EQIEQPSRLVNVEAAPRRRFPAA
Sbjct: 1   MSSMAAASSYWCYRCSRFVRVSNQDSVVCPDCNSGFIEQIEQPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120
           AMYMIG+RSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDG+EAGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGTEAGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTI+IC+N
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIEICDN 180

Query: 181 HLATESHS--------------------YYHCDCILPWLSLRNSCPVCRHELPSDNQNSL 240
           HL TESH                      YH DCILPWLS+RNSCPVCRHELPSDNQNS+
Sbjct: 181 HLETESHCAVCKEAFELGSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHELPSDNQNSV 240

Query: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGG------------GERELPVVYTEVDGGFT 300
           DAAESGENGGSVTSN +ENVGLTIWRLPGGG            GERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENGGSVTSNWDENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGLPRRVSFASRGRGRERGGWGRMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 351
           NGGLPRRVSFASRGRGRE+GGWGR+IRNMFACFGGSMRS+ASTSNSTSDSGPSR+SRPLP
Sbjct: 301 NGGLPRRVSFASRGRGREQGGWGRIIRNMFACFGGSMRSMASTSNSTSDSGPSRNSRPLP 360

[Close]

BLAST of IVF0007960 vs. NCBI nr
Match: XP_022138905.1 (probable E3 ubiquitin-protein ligase RHC2A [Momordica charantia])

HSP 1 Score: 644 bits (1661), Expect = 1.57e-231
Identity = 327/383 (85.38%), Postives = 338/383 (88.25%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA 60
           MSSMAAASSYWCYRCS FVRVSNQDSVVCPDCNSGFVEQIE PSRLVNVEAAPRRRFPAA
Sbjct: 1   MSSMAAASSYWCYRCSRFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120
           AMYMIG+RSNSGQNLGSGLRRSRRNGGDRS FNPVIVLRGPSDGSE GESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGQNLGSGLRRSRRNGGDRSQFNPVIVLRGPSDGSEGGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 HLATESHS--------------------YYHCDCILPWLSLRNSCPVCRHELPSDNQNSL 240
           HL TESH                      YH DCILPWLS+RNSCPVCRHELPSDNQNS 
Sbjct: 181 HLETESHCAVCKEAFELGNEAREMPCKHIYHSDCILPWLSIRNSCPVCRHELPSDNQNSP 240

Query: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGG------------GERELPVVYTEVDGGFT 300
           DAAESGENGG VTSNGEENVGLTIWRLPGGG            GERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENGGPVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGLPRRVSFASRGRGRERGGWGRMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 351
           NGG+PRRVSFASRGRGRERGGW R++RN+FACFGGSMRS ASTS+S +DSGPSRSSRPLP
Sbjct: 301 NGGVPRRVSFASRGRGRERGGWSRILRNLFACFGGSMRSTASTSSSPTDSGPSRSSRPLP 360

[Close]

BLAST of IVF0007960 vs. NCBI nr
Match: XP_022987501.1 (probable E3 ubiquitin-protein ligase RHC2A [Cucurbita maxima])

HSP 1 Score: 630 bits (1625), Expect = 4.78e-226
Identity = 319/383 (83.29%), Postives = 334/383 (87.21%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA 60
           MSSMAAASSYWCYRCS FVRV NQDSVVCPDCNSGF+EQIE PSRLV+VE+APRRRFPAA
Sbjct: 1   MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA 60

Query: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120
           AMYMIG+RSNSGQNLGSG+RR RRNGGDRSPFNPVIVLRGPSDGSE GESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFE+PPASKAAIESMPTI+ICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN 180

Query: 181 HLATESHS--------------------YYHCDCILPWLSLRNSCPVCRHELPSDNQNSL 240
           HL TESH                      YH DCILPWLS+RNSCPVCRHELPSDNQNS 
Sbjct: 181 HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP 240

Query: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGG------------GERELPVVYTEVDGGFT 300
           DAAESGEN GSV SNGEENVGLT+WRLPGGG            GERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENEGSVASNGEENVGLTVWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGLPRRVSFASRGRGRERGGWGRMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 351
           NGG+PRR+SFASRGRGRERGGW R+IRNMFACF GSMRS++STSNST DSG SRSSRPLP
Sbjct: 301 NGGVPRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDSGSSRSSRPLP 360

[Close]

BLAST of IVF0007960 vs. TAIR 10
Match: AT2G39720.1 (RING-H2 finger C2A )

HSP 1 Score: 253.1 bits (645), Expect = 3.4e-67
Identity = 179/407 (43.98%), Postives = 233/407 (57.25%), Query Frame = 0


Query: 6   AASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQP----------SRLVNVEAAPRR 65
           A+ SYWCY CS FV VS  DS+ CPDC+ GF+E I++P          +       +P R
Sbjct: 2   ASGSYWCYSCSRFVWVS--DSISCPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSPTR 61

Query: 66  RFPAAAMYMIGNRSNSGQNLGSG--LRRSRRNGGDRSPFNPVIVLRG----PSDG--SEA 125
             P ++     + S    N  +   + R+R N   RSP NPVIVLRG    PS    SE 
Sbjct: 62  FPPPSSSSSTPSASMHADNSPTPTIVTRTRSN---RSP-NPVIVLRGSAAAPSSDVVSEG 121

Query: 126 GESRRFELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN---GIGRFENPPA 185
            +   F++YYDDG  SGLRPLPPSM+EFLLGSGFDRLL+Q+SQIE+N    +   E+PPA
Sbjct: 122 LDRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPA 181

Query: 186 SKAAIESMPTIQICENHLATESHSY----------------------YHCDCILPWLSLR 245
           SK+AIE++P I+I   HL ++S S+                      YH DCILPWL++R
Sbjct: 182 SKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIR 241

Query: 246 NSCPVCRHELPSDNQNSLDAAESGENGGSVTSNGEEN--VGLTIWRLPGG---------- 305
           NSCPVCRHELP+++    D   +     + T+  EE+   GLTIWRLPGG          
Sbjct: 242 NSCPVCRHELPAEDLT--DGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGG 301

Query: 306 --GGERELPVVYTEVDGG-FTNGGLPRRVSFASR------GRGRERGGW--GRMIRNMFA 341
             GG+R +PVVYTEVDGG   +  LPRRV++ SR      G  RERGG   GR++R +F 
Sbjct: 302 WRGGDRMMPVVYTEVDGGRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGRIMR-LFG 361

[Close]

BLAST of IVF0007960 vs. TAIR 10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 228.4 bits (581), Expect = 8.9e-60
Identity = 172/415 (41.45%), Postives = 212/415 (51.08%), Query Frame = 0


Query: 8   SSYWCYRCSHFVRV------SNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAAA 67
           +SYWCY C+ FV V      +   SV CP C+ GF+EQI   S      AA     PA+ 
Sbjct: 16  ASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSS-----SAATELTIPAST 75

Query: 68  MYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGES-------RRFE 127
                N      N  S +R  RR  G R  FNPVIVL+G +   E GE        R FE
Sbjct: 76  EVRSIN-----NNRRSVIR--RRRSGRRPSFNPVIVLQGGAGEREEGEEGDAARDRRAFE 135

Query: 128 LYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN--GIGRFENPPASKAAIESM 187
            YYDDG GSGLRPLP S+SE L+GSGF+RLLEQLSQIE +  GIGR  NPPASK+AIES+
Sbjct: 136 FYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESL 195

Query: 188 PTIQICENHLATESH--------------------SYYHCDCILPWLSLRNSCPVCRHEL 247
           P ++I + H+ +E++                      +H DCI+PWLS+RNSCPVCR EL
Sbjct: 196 PRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFEL 255

Query: 248 PSD-NQNSLDAAESGENGGSVTSNGEEN-VGLTIWRLPGGG------------GERELPV 307
           PS+ N+ S              +N E+N VG+TIWRLPGGG            GER LPV
Sbjct: 256 PSEPNRRS-------------NNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPV 315

Query: 308 VYTEVDGGFTNGGL--PRRVSFA---------SRGRGRERGGWG---RMIRNMFACF--- 350
           V TE+DGG        PRR+S+          S G G   G  G   RM+R M +     
Sbjct: 316 VLTEMDGGGIGNSQDGPRRISWVRSHGTLESDSNGTGSGSGSGGRLRRMVRGMVSLMRRV 375

[Close]

BLAST of IVF0007960 vs. TAIR 10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 214.5 bits (545), Expect = 1.3e-55
Identity = 163/392 (41.58%), Postives = 209/392 (53.32%), Query Frame = 0


Query: 8   SSYWCYRCSHFVRV-SNQDS---VVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAAAMY 67
           +SYWCY C+ F+ V  +QD+   V+CP CN GF+E+IE  S    V A P      A+  
Sbjct: 29  TSYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSN-STVAAIP------ASTP 88

Query: 68  MIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDG-------SEAG-----ESR 127
            + +   + +++   +RR R N   R+ FNPVIVL G   G       +E G     E R
Sbjct: 89  EVRSVEETHRSI---IRRRRSN--RRTSFNPVIVLHGGGGGGAGERVENEEGDGATRERR 148

Query: 128 RFELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEM--NGIGRFENPPASKAAI 187
            +E YYDDG GSGLRPLP S+SE L+GSGF+RLLEQLSQIE   NGIGR  NPPASK+AI
Sbjct: 149 AYEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAI 208

Query: 188 ESMPTIQICENHLATESH--------------------SYYHCDCILPWLSLRNSCPVCR 247
           ES+P ++I + H   E++                      +H DCI+PWLS+RNSCPVCR
Sbjct: 209 ESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCR 268

Query: 248 HELPSDNQNSLDAAESGENGGSVTSNGEEN-VGLTIWRLPGGG------------GEREL 307
            ELPSD                  SN EE+ VG+TIWRLPGGG            GER L
Sbjct: 269 FELPSDPIQ--------------RSNEEEHAVGMTIWRLPGGGFAVGRFNAGVREGERIL 328

Query: 308 PVVYTEVDGG--FTNGGLPRRVSFA--------SRGRGRERGG--WGRMIRNMFACFGGS 337
           PVV TE+DGG   +N G PRR+S+         SR  GR   G    R +R M +     
Sbjct: 329 PVVLTEMDGGGLGSNEG-PRRISWVRAHETPEMSRNGGRSGNGGRLRRAVRGMVSFMRRV 388

[Close]

BLAST of IVF0007960 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 101.7 bits (252), Expect = 1.3e-21
Identity = 80/309 (25.89%), Postives = 139/309 (44.98%), Query Frame = 0


Query: 10  YWCYRCSHFVRVSNQDSV--VCPDCNSGFVEQIEQPSRLVNVEAAPRRR---FPAAAMY- 69
           ++CY+C+  V +S   S    CP CN GF+E+ E P+   ++   P      FP A  + 
Sbjct: 21  FFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMADPFS 80

Query: 70  -----MIGNRSNSGQNL------GSGLR---RSRRNGGDRSPFNPVIVLRGPSDGSEAGE 129
                + G+ + +   +      G  ++   RS +       F+P   L+     +    
Sbjct: 81  TLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQ-TLRSS 140

Query: 130 SRRFELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAI 189
              FE   ++        +P +  ++  G G ++L++QL++ + N   R+  PPASK+AI
Sbjct: 141 GTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPN---RYGTPPASKSAI 200

Query: 190 ESMPTIQICENHLATESHS---------------------YYHCDCILPWLSLRNSCPVC 249
           +++PT+++ ++ L +E +                       +H DC+LPWL L NSCPVC
Sbjct: 201 DALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVC 260

Query: 250 RHELPSDN----QNSLDAAESGENGGSVTSNGEENVGLTIWRLPGGGGERELPVVYTEVD 274
           R ELP+D+      S  +  SG+  GSV   G++    +I          +LP  +   D
Sbjct: 261 RFELPTDDPDYENRSQGSQGSGDGQGSV--EGQQTPRFSI----------QLPWPFRRQD 313

[Close]

BLAST of IVF0007960 vs. TAIR 10
Match: AT3G56580.2 (RING/U-box superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 6.9e-20
Identity = 79/260 (30.38%), Postives = 119/260 (45.77%), Query Frame = 0


Query: 8   SSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIE-QPSRL-VNVEAAP----RRRFPAAA 67
           +++WC+RC   V +  +D+ VC  C  GFVE+I+  PSR   +VE  P       F A  
Sbjct: 6   NTHWCHRCQRAVWLRARDA-VCSYCGGGFVEEIDIGPSRAHRDVERDPTFDLMEAFSAFM 65

Query: 68  MYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDGG 127
              +  RS   +  G   R         S   P+++  G +    AG        + +G 
Sbjct: 66  RSRLAERSYDREISG---RLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSSVEAFVNGA 125

Query: 128 GSGLR-PLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 187
             G+      +  ++  G G + L+EQLS    +G      PPA K++I+++PTI+I + 
Sbjct: 126 APGIGIARGTNAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDALPTIKITQK 185

Query: 188 HLATES---------------------HSYYHCDCILPWLSLRNSCPVCRHELPSDNQNS 240
           HL +                       H  YH DCI+PWL   NSCPVCR ELPS  + S
Sbjct: 186 HLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPS--RGS 245

The following BLAST results are available for this feature:

BLAST of IVF0007960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22283	4.7e-66	43.98	Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q940T5	1.2e-58	41.45	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
Q9SNB6	1.9e-54	41.58	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
Q8LPN7	1.8e-20	25.89	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
P0CH30	6.7e-20	25.53	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]

BLAST of IVF0007960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UA14	3.6e-194	91.12	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CGL6	3.6e-194	91.12	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103500230 PE=4 ...	[more]
A0A0A0KLW4	1.1e-190	89.56	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_5G182680 PE...	[more]
A0A6J1CAT7	7.1e-182	85.38	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11100997...	[more]
A0A6J1JEE7	1.1e-177	83.29	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111485043 P...	[more]

BLAST of IVF0007960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461689.1	1.11e-247	91.12	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >KAA0050339.1 E...	[more]
XP_004147682.1	4.12e-243	89.56	probable E3 ubiquitin-protein ligase RHC2A [Cucumis sativus] >KGN50563.1 hypothe...	[more]
XP_038890198.1	7.29e-237	86.68	probable E3 ubiquitin-protein ligase RHC2A [Benincasa hispida]	[more]
XP_022138905.1	1.57e-231	85.38	probable E3 ubiquitin-protein ligase RHC2A [Momordica charantia]	[more]
XP_022987501.1	4.78e-226	83.29	probable E3 ubiquitin-protein ligase RHC2A [Cucurbita maxima]	[more]

BLAST of IVF0007960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39720.1	3.4e-67	43.98	RING-H2 finger C2A	[more]
AT5G59550.1	8.9e-60	41.45	zinc finger (C3HC4-type RING finger) family protein	[more]
AT3G46620.1	1.3e-55	41.58	zinc finger (C3HC4-type RING finger) family protein	[more]
AT3G19950.1	1.3e-21	25.89	RING/U-box superfamily protein	[more]
AT3G56580.2	6.9e-20	30.38	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010543	Domain of unknown function DUF1117	PFAM	PF06547	DUF1117	coord: 240..323 e-value: 1.7E-19 score: 70.5
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 168..230 e-value: 8.4E-8 score: 33.7
IPR039525	E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon	PFAM	PF14369	zinc_ribbon_9	coord: 9..40 e-value: 7.7E-13 score: 48.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..328
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..351
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 6..300
None	No IPR available	PANTHER	PTHR15710:SF112	E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKE PROTEIN	coord: 6..300
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 189..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0007960.2	IVF0007960.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity