IVF0007959 (gene) Melon (IVF77) v1

Overview
NameIVF0007959
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr03: 17092673 .. 17093134 (+)
RNA-Seq ExpressionIVF0007959
SyntenyIVF0007959
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCAAATTGGATCCTCCATCCAAATACTTCATCTACACCATGGGAGGCAACAGGCAAAAGAAATCTCACTCATCTTTTTCGATCTTTACCTTTTTCAAATCCAGGAGGGGTCGAAAAGGAGACCACTGCGACCATGGTGGTGCTTGGCCGGACGAGATGCCGAGATCGAACAAGGTGTGGCCAAGTGATGAGGACAAAGCTCATCATTGGGTTGCTGAACCTGGTATTGATCGAAAGGCCAAAGATTATATTGACAGGATCTATCGGAACCGTGTTTTTGAATCTGAGCGCCAAACTGTCACTATATCTCCCAATGGAACAAAATCCAATTTGTAAATAATTTGTTTATATTTTCATTTTCTTTTCATATGTTATTAGTTCATTAAAAATGTATTTTTATAATTTTTATCCAGCTTATGAAACTGTTAAACGAACTATCTTCAAAGGGAATTCTTAAGCCCC

mRNA sequence

ACCAAATTGGATCCTCCATCCAAATACTTCATCTACACCATGGGAGGCAACAGGCAAAAGAAATCTCACTCATCTTTTTCGATCTTTACCTTTTTCAAATCCAGGAGGGGTCGAAAAGGAGACCACTGCGACCATGGTGGTGCTTGGCCGGACGAGATGCCGAGATCGAACAAGGTGTGGCCAAGTGATGAGGACAAAGCTCATCATTGGGTTGCTGAACCTGGTATTGATCGAAAGGCCAAAGATTATATTGACAGGATCTATCGGAACCGTGTTTTTGAATCTGAGCGCCAAACTGTCACTATATCTCCCAATGGAACAAAATCCAATTTGTAAATAATTTGTTTATATTTTCATTTTCTTTTCATATGTTATTAGTTCATTAAAAATGTATTTTTATAATTTTTATCCAGCTTATGAAACTGTTAAACGAACTATCTTCAAAGGGAATTCTTAAGCCCC

Coding sequence (CDS)

ATGGGAGGCAACAGGCAAAAGAAATCTCACTCATCTTTTTCGATCTTTACCTTTTTCAAATCCAGGAGGGGTCGAAAAGGAGACCACTGCGACCATGGTGGTGCTTGGCCGGACGAGATGCCGAGATCGAACAAGGTGTGGCCAAGTGATGAGGACAAAGCTCATCATTGGGTTGCTGAACCTGGTATTGATCGAAAGGCCAAAGATTATATTGACAGGATCTATCGGAACCGTGTTTTTGAATCTGAGCGCCAAACTGTCACTATATCTCCCAATGGAACAAAATCCAATTTGTAA

Protein sequence

MGGNRQKKSHSSFSIFTFFKSRRGRKGDHCDHGGAWPDEMPRSNKVWPSDEDKAHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSNL
Homology
BLAST of IVF0007959 vs. ExPASy TrEMBL
Match: A0A0A0K7Y2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014900 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 5.8e-49
Identity = 93/98 (94.90%), Postives = 97/98 (98.98%), Query Frame = 0

Query: 1  MGGNRQKKSHSSFSIFTFFKSRRGRKGDHCDHGGAWPDEMPRSNKVWPSDEDKAHHWVAE 60
          MGGNRQKKSHSSFSIF+FFKS+RGRKGDH DHGGAWPDEMPRSNKVWPSDEDKAHHW+AE
Sbjct: 1  MGGNRQKKSHSSFSIFSFFKSKRGRKGDHYDHGGAWPDEMPRSNKVWPSDEDKAHHWIAE 60

Query: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSNL 99
          PGIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSN+
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSNV 98

BLAST of IVF0007959 vs. ExPASy TrEMBL
Match: A0A0A0KBW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014870 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.9e-48
Identity = 94/98 (95.92%), Postives = 96/98 (97.96%), Query Frame = 0

Query: 1  MGGNRQKKSHSSFSIFTFFKSRRGRKGDHCDHGGAWPDEMPRSNKVWPSDEDKAHHWVAE 60
          MGGNRQKKSHSSFSIF+FFKSRRGRKGDH DHGGAW DEMPRSNKVWPSDEDKAHHWVAE
Sbjct: 1  MGGNRQKKSHSSFSIFSFFKSRRGRKGDHYDHGGAWLDEMPRSNKVWPSDEDKAHHWVAE 60

Query: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSNL 99
          PGIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSN+
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSNV 98

BLAST of IVF0007959 vs. ExPASy TrEMBL
Match: A0A5A7SWT9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00350 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.1e-43
Identity = 86/97 (88.66%), Postives = 92/97 (94.85%), Query Frame = 0

Query: 2  GGNRQKKSHSSFSIFTFFKSRRGRKGDHCDHGGAWPDEMPRSNKVWPSDEDKAHHWVAEP 61
          G NRQKKSHSSFSIF+FFKSRRGRKGD+C+H G+  DEMPRS KVWPSDEDKAHHWVAEP
Sbjct: 3  GNNRQKKSHSSFSIFSFFKSRRGRKGDNCNHSGSCLDEMPRSGKVWPSDEDKAHHWVAEP 62

Query: 62 GIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSNL 99
          GIDRKAKDYIDRIYRNRVFESERQT+TISPNGTKSN+
Sbjct: 63 GIDRKAKDYIDRIYRNRVFESERQTITISPNGTKSNV 99

BLAST of IVF0007959 vs. ExPASy TrEMBL
Match: A0A0A0KAK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014890 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 6.2e-43
Identity = 85/97 (87.63%), Postives = 91/97 (93.81%), Query Frame = 0

Query: 2  GGNRQKKSHSSFSIFTFFKSRRGRKGDHCDHGGAWPDEMPRSNKVWPSDEDKAHHWVAEP 61
          G NRQKK+H+SFSIF+FFKSRRGRKGDHC+H G+  DEMPRS KVWPSDEDKAHHWVAEP
Sbjct: 3  GNNRQKKAHASFSIFSFFKSRRGRKGDHCNHSGSCLDEMPRSGKVWPSDEDKAHHWVAEP 62

Query: 62 GIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSNL 99
          GIDRKAKDYIDRIYRNRVFESERQTVTISPNG KSN+
Sbjct: 63 GIDRKAKDYIDRIYRNRVFESERQTVTISPNGIKSNV 99

BLAST of IVF0007959 vs. ExPASy TrEMBL
Match: A0A0A0K8V3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014880 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.5e-36
Identity = 75/92 (81.52%), Postives = 80/92 (86.96%), Query Frame = 0

Query: 1  MGGNRQKKSHSSFSIFTFFKSRRGRKGDHCDHGGAWPDEMPRSNKVWPSDEDKAHHWVAE 60
          MGG++ KKSHSSFS F+F KS+  RKGDH DHGG+W DE  RS KVWPSDEDKAHHWVAE
Sbjct: 1  MGGHKHKKSHSSFSFFSFLKSKWSRKGDHYDHGGSWLDEKSRSGKVWPSDEDKAHHWVAE 60

Query: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTISPN 93
          PGIDRKAKDYIDRIYRNRVFESERQTVTI  N
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTN 92

BLAST of IVF0007959 vs. NCBI nr
Match: KGN45870.1 (hypothetical protein Csa_004960 [Cucumis sativus])

HSP 1 Score: 205 bits (521), Expect = 1.29e-66
Identity = 93/98 (94.90%), Postives = 97/98 (98.98%), Query Frame = 0

Query: 1  MGGNRQKKSHSSFSIFTFFKSRRGRKGDHCDHGGAWPDEMPRSNKVWPSDEDKAHHWVAE 60
          MGGNRQKKSHSSFSIF+FFKS+RGRKGDH DHGGAWPDEMPRSNKVWPSDEDKAHHW+AE
Sbjct: 1  MGGNRQKKSHSSFSIFSFFKSKRGRKGDHYDHGGAWPDEMPRSNKVWPSDEDKAHHWIAE 60

Query: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSNL 98
          PGIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSN+
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSNV 98

BLAST of IVF0007959 vs. NCBI nr
Match: KAA0035003.1 (hypothetical protein E6C27_scaffold57G00440 [Cucumis melo var. makuwa] >TYK02343.1 hypothetical protein E5676_scaffold155G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 187 bits (474), Expect = 1.97e-59
Identity = 86/97 (88.66%), Postives = 92/97 (94.85%), Query Frame = 0

Query: 2  GGNRQKKSHSSFSIFTFFKSRRGRKGDHCDHGGAWPDEMPRSNKVWPSDEDKAHHWVAEP 61
          G NRQKKSHSSFSIF+FFKSRRGRKGD+C+H G+  DEMPRS KVWPSDEDKAHHWVAEP
Sbjct: 3  GNNRQKKSHSSFSIFSFFKSRRGRKGDNCNHSGSCLDEMPRSGKVWPSDEDKAHHWVAEP 62

Query: 62 GIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSNL 98
          GIDRKAKDYIDRIYRNRVFESERQT+TISPNGTKSN+
Sbjct: 63 GIDRKAKDYIDRIYRNRVFESERQTITISPNGTKSNV 99

BLAST of IVF0007959 vs. NCBI nr
Match: KGN45869.1 (hypothetical protein Csa_005516 [Cucumis sativus])

HSP 1 Score: 185 bits (470), Expect = 8.05e-59
Identity = 85/97 (87.63%), Postives = 91/97 (93.81%), Query Frame = 0

Query: 2  GGNRQKKSHSSFSIFTFFKSRRGRKGDHCDHGGAWPDEMPRSNKVWPSDEDKAHHWVAEP 61
          G NRQKK+H+SFSIF+FFKSRRGRKGDHC+H G+  DEMPRS KVWPSDEDKAHHWVAEP
Sbjct: 3  GNNRQKKAHASFSIFSFFKSRRGRKGDHCNHSGSCLDEMPRSGKVWPSDEDKAHHWVAEP 62

Query: 62 GIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSNL 98
          GIDRKAKDYIDRIYRNRVFESERQTVTISPNG KSN+
Sbjct: 63 GIDRKAKDYIDRIYRNRVFESERQTVTISPNGIKSNV 99

BLAST of IVF0007959 vs. NCBI nr
Match: KAG6592316.1 (hypothetical protein SDJN03_14662, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 168 bits (426), Expect = 4.02e-52
Identity = 79/97 (81.44%), Postives = 83/97 (85.57%), Query Frame = 0

Query: 2  GGNRQKKSHSSFSIFTFFKSRRGRKGDHCDHGGAWPDEMPRSNKVWPSDEDKAHHWVAEP 61
          G NR KK+HSSFSIF FFK RRGRK DHCDH G W DEMPRSNKVWPSDEDK H WVAEP
Sbjct: 3  GNNRSKKAHSSFSIFNFFKFRRGRKEDHCDHSGCW-DEMPRSNKVWPSDEDKMHRWVAEP 62

Query: 62 GIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSNL 98
          GIDRKAKDYIDRIYRNRV ESERQTVT+  +GTK +L
Sbjct: 63 GIDRKAKDYIDRIYRNRVLESERQTVTLPASGTKLDL 98

BLAST of IVF0007959 vs. NCBI nr
Match: KAG6592308.1 (hypothetical protein SDJN03_14654, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 167 bits (422), Expect = 1.64e-51
Identity = 77/97 (79.38%), Postives = 84/97 (86.60%), Query Frame = 0

Query: 2  GGNRQKKSHSSFSIFTFFKSRRGRKGDHCDHGGAWPDEMPRSNKVWPSDEDKAHHWVAEP 61
          G NR KK+HSSFSIF FFKSRR RK DHCDH G W DE+PRS+K+WPSDEDK H WVAEP
Sbjct: 3  GNNRSKKAHSSFSIFNFFKSRRSRKEDHCDHSGGW-DEIPRSSKIWPSDEDKIHRWVAEP 62

Query: 62 GIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSNL 98
          GIDRKAKDYIDRIYRNRVFESERQTVT+  +GTK +L
Sbjct: 63 GIDRKAKDYIDRIYRNRVFESERQTVTLPASGTKLDL 98

BLAST of IVF0007959 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 74.7 bits (182), Expect = 4.6e-14
Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = 0

Query: 1  MGGNRQKKSHSSFSIFTFFKSRRGRKGDHCDHGGAWPDEMPRSNKVWPSDEDKAHHWVAE 60
          MGG  +  S   FS+F+FFK+RR  +    +  G+W D+   + K   SDEDK  +WVAE
Sbjct: 1  MGGKNRSHSSKRFSLFSFFKTRRSHR---VEADGSW-DDFGYTRKAMASDEDK-RYWVAE 60

Query: 61 PGIDRKAKDYIDRIYRNRVFESERQTVT 89
          PGIDRKA  +I + +  RV ESERQT++
Sbjct: 61 PGIDRKASAFIAKFHATRVSESERQTLS 83

BLAST of IVF0007959 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.5 bits (140), Expect = 3.4e-09
Identity = 31/63 (49.21%), Postives = 40/63 (63.49%), Query Frame = 0

Query: 25 RKGDHCDHGGAWPDEMPRSNKVWPSDEDKAHHWVAEPGIDRKAKDYIDRIYRNRVFESER 84
          R   H     A  D++  + K W SDEDK  +WVAEPGIDRKA  +I + + +RV ESER
Sbjct: 5  RSSHHRVEADASWDDVIYTRKAWASDEDK-RYWVAEPGIDRKASAFIAKFHASRVSESER 64

Query: 85 QTV 88
          QT+
Sbjct: 65 QTL 66

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K7Y25.8e-4994.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014900 PE=4 SV=1[more]
A0A0A0KBW12.9e-4895.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014870 PE=4 SV=1[more]
A0A5A7SWT92.1e-4388.66Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KAK66.2e-4387.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014890 PE=4 SV=1[more]
A0A0A0K8V32.5e-3681.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014880 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KGN45870.11.29e-6694.90hypothetical protein Csa_004960 [Cucumis sativus][more]
KAA0035003.11.97e-5988.66hypothetical protein E6C27_scaffold57G00440 [Cucumis melo var. makuwa] >TYK02343... [more]
KGN45869.18.05e-5987.63hypothetical protein Csa_005516 [Cucumis sativus][more]
KAG6592316.14.02e-5281.44hypothetical protein SDJN03_14662, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6592308.11.64e-5179.38hypothetical protein SDJN03_14654, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
AT3G05858.14.6e-1446.59unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G26620.13.4e-0949.21unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..48
NoneNo IPR availablePANTHERPTHR33511OS06G0632400 PROTEINcoord: 1..88
NoneNo IPR availablePANTHERPTHR33511:SF17RIBOSOMAL PROTEIN S12coord: 1..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0007959.1IVF0007959.1mRNA