IVF0007935 (gene) Melon (IVF77) v1

Overview


Name	IVF0007935
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Calcium uniporter protein
Location	chr09: 18293163 .. 18293563 (-)
RNA-Seq Expression	IVF0007935
Synteny	IVF0007935

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAGGAAATGTTGTTCTTCTGCTACTAGTTTATTCGTTAAGATATCGTTGGTTAATGGGGTTTCTGGGTCTTCTTCTCTGGTTTATTATGGAACTTTAAGCCTTTCTGTCGAAGTTTCCTTCATTCCATCGCCCCCTGTACGATCCTCCATGTTGTTTTGTATCGGAGTTGCTTTGTTTTCGTCGTTTGTGGATTCTGGGAATTTTACTAGAGTCGTCGTGATGTGGATAAAAGTGAGAGTGGTGGTGGCTCTGGTATTAGGTCTATGAATGAAGAATCTGGTAATGGAATTGGGGGAGAGGCGATTTCGTTTGAGGAAGCAAAGAGGTTGATGAGATTGGTTACTATTGAGGCATTGAAGATGAAATTGGGGACTAATGGGAAGGAGGTGATTTGA

mRNA sequence

ATGTGGAGGAAATGTTGTTCTTCTGCTACTAGTTTATTCGTTAAGATATCGTTGGTTAATGGGGTTTCTGGGTCTTCTTCTCTGGTTTATTATGGAACTTTAAGCCTTTCTGTCGAAGTTTCCTTCATTCCATCGCCCCCTGTACGATCCTCCATGTTGTTTTGTATCGGAGTTGCTTTGTTTTCGTCTCGTCGTGATGTGGATAAAAGTGAGAGTGGTGGTGGCTCTGGTATTAGGTCTATGAATGAAGAATCTGGTAATGGAATTGGGGGAGAGGCGATTTCGTTTGAGGAAGCAAAGAGGTTGATGAGATTGGTTACTATTGAGGCATTGAAGATGAAATTGGGGACTAATGGGAAGGAGGTGATTTGA

Coding sequence (CDS)

ATGTGGAGGAAATGTTGTTCTTCTGCTACTAGTTTATTCGTTAAGATATCGTTGGTTAATGGGGTTTCTGGGTCTTCTTCTCTGGTTTATTATGGAACTTTAAGCCTTTCTGTCGAAGTTTCCTTCATTCCATCGCCCCCTGTACGATCCTCCATGTTGTTTTGTATCGGAGTTGCTTTGTTTTCGTCTCGTCGTGATGTGGATAAAAGTGAGAGTGGTGGTGGCTCTGGTATTAGGTCTATGAATGAAGAATCTGGTAATGGAATTGGGGGAGAGGCGATTTCGTTTGAGGAAGCAAAGAGGTTGATGAGATTGGTTACTATTGAGGCATTGAAGATGAAATTGGGGACTAATGGGAAGGAGGTGATTTGA

Protein sequence

MWRKCCSSATSLFVKISLVNGVSGSSSLVYYGTLSLSVEVSFIPSPPVRSSMLFCIGVALFSSRRDVDKSESGGGSGIRSMNEESGNGIGGEAISFEEAKRLMRLVTIEALKMKLGTNGKEVI

Homology

[Close]

BLAST of IVF0007935 vs. ExPASy TrEMBL
Match: A0A5A7TWZ2 (Calcium uniporter protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G001830 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.1e-48
Identity = 109/133 (81.95%), Postives = 117/133 (87.97%), Query Frame = 0


Query: 1   MWRKCCSSATSLFVKISLVNGVSGSSSLVYYGTLSLSVEVSFIPSPPVRSSMLFCIGVAL 60
           MWRKCCSSATSLFVK SLVNGVSGSSS +YYGTLSLS+EVSFIPSPP+RSS LFCI VAL
Sbjct: 1   MWRKCCSSATSLFVKRSLVNGVSGSSSPIYYGTLSLSIEVSFIPSPPIRSSRLFCIRVAL 60

Query: 61  FSS----------RRDVDKSESGGGSGIRSMNEESGNGIGGEAISFEEAKRLMRLVTIEA 120
           FSS          RRDVDKSESGGGSGIRS+NEESGNGIGGEAISFEEAKRLMRLV ++A
Sbjct: 61  FSSFVDSENFTRVRRDVDKSESGGGSGIRSVNEESGNGIGGEAISFEEAKRLMRLVNVKA 120

Query: 121 LKMKLGTNGKEVI 124
            +MKLGT+GKEVI
Sbjct: 121 FEMKLGTDGKEVI 133

[Close]

BLAST of IVF0007935 vs. ExPASy TrEMBL
Match: A0A5A7TTB3 (Calcium uniporter protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1572G00240 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.2e-45
Identity = 107/123 (86.99%), Postives = 107/123 (86.99%), Query Frame = 0


Query: 1   MWRKCCSSATSLFVKISLVNGVSGSSSLVYYGTLSLSVEVSFIPSPPVRSSMLFCIGVAL 60
           MWRKCCSSATSLFVKISLVNGVSGSSSLVYYGTLSLSVEVSFIPSPP             
Sbjct: 1   MWRKCCSSATSLFVKISLVNGVSGSSSLVYYGTLSLSVEVSFIPSPP------------- 60

Query: 61  FSSRRDVDKSESGGGSGIRSMNEESGNGIGGEAISFEEAKRLMRLVTIEALKMKLGTNGK 120
             SRRDVDKSESG GSGIRSMNEESGNGIGGEAISFEEAKRLMRLVTIEALKMKLGTNGK
Sbjct: 61  --SRRDVDKSESGDGSGIRSMNEESGNGIGGEAISFEEAKRLMRLVTIEALKMKLGTNGK 108

Query: 121 EVI 124
           EVI
Sbjct: 121 EVI 108

[Close]

BLAST of IVF0007935 vs. ExPASy TrEMBL
Match: A0A5A7UR75 (Calcium uniporter protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold371G00250 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 3.0e-42
Identity = 103/133 (77.44%), Postives = 108/133 (81.20%), Query Frame = 0


Query: 1   MWRKCCSSATSLFVKISLVNGVSGSSSLVYYGTLSLSVEVSFIPSPPVRSSMLFCIGVAL 60
           MWRKCCS ATSLFV+  LVN VS SSS VYYGTL LSVEVSFIPSPPVR S LFCIGVAL
Sbjct: 1   MWRKCCSFATSLFVRRLLVNEVSRSSSPVYYGTLRLSVEVSFIPSPPVRFSRLFCIGVAL 60

Query: 61  FSS----------RRDVDKSESGGGSGIRSMNEESGNGIGGEAISFEEAKRLMRLVTIEA 120
           FSS          RRDVDKSESGGG GIRS+NEES NGIGGEAISF E KRLMRLV +EA
Sbjct: 61  FSSSVDSENFTGVRRDVDKSESGGGPGIRSVNEESSNGIGGEAISFGEVKRLMRLVNVEA 120

Query: 121 LKMKLGTNGKEVI 124
           L+MKL T+GKEVI
Sbjct: 121 LEMKLRTDGKEVI 133

[Close]

BLAST of IVF0007935 vs. ExPASy TrEMBL
Match: A0A5A7SU81 (Calcium uniporter protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G00670 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.6e-40
Identity = 99/133 (74.44%), Postives = 104/133 (78.20%), Query Frame = 0


Query: 1   MWRKCCSSATSLFVKISLVNGVSGSSSLVYYGTLSLSVEVSFIPSPPVRSSMLFCIGVAL 60
           MWRKCCSSATSLF +  LVNGVSGSSS VYYGTL LS  VSF PSPP+RSS  FC GVAL
Sbjct: 1   MWRKCCSSATSLFTRRLLVNGVSGSSSPVYYGTLGLSAGVSFNPSPPLRSSSWFCTGVAL 60

Query: 61  FSS----------RRDVDKSESGGGSGIRSMNEESGNGIGGEAISFEEAKRLMRLVTIEA 120
           FSS          RRDVDKSESGGG GI S+ EESGNGIG E ISF EAKRLMRLV +EA
Sbjct: 61  FSSSVDSGNFTGVRRDVDKSESGGGPGIGSVKEESGNGIGEEEISFGEAKRLMRLVNVEA 120

Query: 121 LKMKLGTNGKEVI 124
           LKMKLGT+GKE I
Sbjct: 121 LKMKLGTDGKEAI 133

[Close]

BLAST of IVF0007935 vs. ExPASy TrEMBL
Match: A0A5A7V5N2 (Calcium uniporter protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2803G00010 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.6e-40
Identity = 99/133 (74.44%), Postives = 107/133 (80.45%), Query Frame = 0


Query: 1   MWRKCCSSATSLFVKISLVNGVSGSSSLVYYGTLSLSVEVSFIPSPPVRSSMLFCIGVAL 60
           MWRKCCSSATSLFV+  LVNGVS +SSLVYYGTL LSVEVSFIPSPPVR S LFCI   L
Sbjct: 1   MWRKCCSSATSLFVRRLLVNGVSRTSSLVYYGTLRLSVEVSFIPSPPVRFSRLFCIEFTL 60

Query: 61  FSS----------RRDVDKSESGGGSGIRSMNEESGNGIGGEAISFEEAKRLMRLVTIEA 120
           F S          RRDVDKSESGG  GIRS+N+ES NGIGGEAISF EAKRLMRLV +EA
Sbjct: 61  FLSSVDYRNFTRVRRDVDKSESGGSPGIRSVNKESSNGIGGEAISFGEAKRLMRLVNVEA 120

Query: 121 LKMKLGTNGKEVI 124
           L+MKLGT+ K+VI
Sbjct: 121 LEMKLGTDRKKVI 133

[Close]

BLAST of IVF0007935 vs. NCBI nr
Match: KAA0046427.1 (calcium uniporter protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 203 bits (517), Expect = 5.01e-65
Identity = 109/133 (81.95%), Postives = 117/133 (87.97%), Query Frame = 0


Query: 1   MWRKCCSSATSLFVKISLVNGVSGSSSLVYYGTLSLSVEVSFIPSPPVRSSMLFCIGVAL 60
           MWRKCCSSATSLFVK SLVNGVSGSSS +YYGTLSLS+EVSFIPSPP+RSS LFCI VAL
Sbjct: 1   MWRKCCSSATSLFVKRSLVNGVSGSSSPIYYGTLSLSIEVSFIPSPPIRSSRLFCIRVAL 60

Query: 61  FSS----------RRDVDKSESGGGSGIRSMNEESGNGIGGEAISFEEAKRLMRLVTIEA 120
           FSS          RRDVDKSESGGGSGIRS+NEESGNGIGGEAISFEEAKRLMRLV ++A
Sbjct: 61  FSSFVDSENFTRVRRDVDKSESGGGSGIRSVNEESGNGIGGEAISFEEAKRLMRLVNVKA 120

Query: 121 LKMKLGTNGKEVI 123
            +MKLGT+GKEVI
Sbjct: 121 FEMKLGTDGKEVI 133

[Close]

BLAST of IVF0007935 vs. NCBI nr
Match: KAA0046380.1 (calcium uniporter protein 6 [Cucumis melo var. makuwa] >TYK06541.1 calcium uniporter protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 192 bits (489), Expect = 3.76e-61
Identity = 107/123 (86.99%), Postives = 107/123 (86.99%), Query Frame = 0


Query: 1   MWRKCCSSATSLFVKISLVNGVSGSSSLVYYGTLSLSVEVSFIPSPPVRSSMLFCIGVAL 60
           MWRKCCSSATSLFVKISLVNGVSGSSSLVYYGTLSLSVEVSFIPSPP             
Sbjct: 1   MWRKCCSSATSLFVKISLVNGVSGSSSLVYYGTLSLSVEVSFIPSPP------------- 60

Query: 61  FSSRRDVDKSESGGGSGIRSMNEESGNGIGGEAISFEEAKRLMRLVTIEALKMKLGTNGK 120
             SRRDVDKSESG GSGIRSMNEESGNGIGGEAISFEEAKRLMRLVTIEALKMKLGTNGK
Sbjct: 61  --SRRDVDKSESGDGSGIRSMNEESGNGIGGEAISFEEAKRLMRLVTIEALKMKLGTNGK 108

Query: 121 EVI 123
           EVI
Sbjct: 121 EVI 108

[Close]

BLAST of IVF0007935 vs. NCBI nr
Match: KAA0057137.1 (calcium uniporter protein 6 [Cucumis melo var. makuwa] >TYJ97118.1 calcium uniporter protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 183 bits (464), Expect = 5.96e-57
Identity = 103/133 (77.44%), Postives = 108/133 (81.20%), Query Frame = 0


Query: 1   MWRKCCSSATSLFVKISLVNGVSGSSSLVYYGTLSLSVEVSFIPSPPVRSSMLFCIGVAL 60
           MWRKCCS ATSLFV+  LVN VS SSS VYYGTL LSVEVSFIPSPPVR S LFCIGVAL
Sbjct: 1   MWRKCCSFATSLFVRRLLVNEVSRSSSPVYYGTLRLSVEVSFIPSPPVRFSRLFCIGVAL 60

Query: 61  FSS----------RRDVDKSESGGGSGIRSMNEESGNGIGGEAISFEEAKRLMRLVTIEA 120
           FSS          RRDVDKSESGGG GIRS+NEES NGIGGEAISF E KRLMRLV +EA
Sbjct: 61  FSSSVDSENFTGVRRDVDKSESGGGPGIRSVNEESSNGIGGEAISFGEVKRLMRLVNVEA 120

Query: 121 LKMKLGTNGKEVI 123
           L+MKL T+GKEVI
Sbjct: 121 LEMKLRTDGKEVI 133

[Close]

BLAST of IVF0007935 vs. NCBI nr
Match: KAA0062530.1 (calcium uniporter protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 177 bits (449), Expect = 1.15e-54
Identity = 99/133 (74.44%), Postives = 107/133 (80.45%), Query Frame = 0


Query: 1   MWRKCCSSATSLFVKISLVNGVSGSSSLVYYGTLSLSVEVSFIPSPPVRSSMLFCIGVAL 60
           MWRKCCSSATSLFV+  LVNGVS +SSLVYYGTL LSVEVSFIPSPPVR S LFCI   L
Sbjct: 1   MWRKCCSSATSLFVRRLLVNGVSRTSSLVYYGTLRLSVEVSFIPSPPVRFSRLFCIEFTL 60

Query: 61  FSS----------RRDVDKSESGGGSGIRSMNEESGNGIGGEAISFEEAKRLMRLVTIEA 120
           F S          RRDVDKSESGG  GIRS+N+ES NGIGGEAISF EAKRLMRLV +EA
Sbjct: 61  FLSSVDYRNFTRVRRDVDKSESGGSPGIRSVNKESSNGIGGEAISFGEAKRLMRLVNVEA 120

Query: 121 LKMKLGTNGKEVI 123
           L+MKLGT+ K+VI
Sbjct: 121 LEMKLGTDRKKVI 133

[Close]

BLAST of IVF0007935 vs. NCBI nr
Match: XP_008456264.1 (PREDICTED: calcium uniporter protein 6, mitochondrial-like [Cucumis melo] >KAA0033546.1 calcium uniporter protein 6 [Cucumis melo var. makuwa] >TYJ95642.1 calcium uniporter protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 177 bits (449), Expect = 4.75e-52
Identity = 99/133 (74.44%), Postives = 104/133 (78.20%), Query Frame = 0


Query: 1   MWRKCCSSATSLFVKISLVNGVSGSSSLVYYGTLSLSVEVSFIPSPPVRSSMLFCIGVAL 60
           MWRKCCSSATSLF +  LVNGVSGSSS VYYGTL LS  VSF PSPP+RSS  FC GVAL
Sbjct: 1   MWRKCCSSATSLFTRRLLVNGVSGSSSPVYYGTLGLSAGVSFNPSPPLRSSSWFCTGVAL 60

Query: 61  FSS----------RRDVDKSESGGGSGIRSMNEESGNGIGGEAISFEEAKRLMRLVTIEA 120
           FSS          RRDVDKSESGGG GI S+ EESGNGIG E ISF EAKRLMRLV +EA
Sbjct: 61  FSSSVDSGNFTGVRRDVDKSESGGGPGIGSVKEESGNGIGEEEISFGEAKRLMRLVNVEA 120

Query: 121 LKMKLGTNGKEVI 123
           LKMKLGT+GKE I
Sbjct: 121 LKMKLGTDGKEAI 133

The following BLAST results are available for this feature:

BLAST of IVF0007935 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0007935 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TWZ2	2.1e-48	81.95	Calcium uniporter protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5A7TTB3	2.2e-45	86.99	Calcium uniporter protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7UR75	3.0e-42	77.44	Calcium uniporter protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7SU81	1.6e-40	74.44	Calcium uniporter protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7V5N2	1.6e-40	74.44	Calcium uniporter protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]

BLAST of IVF0007935 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046427.1	5.01e-65	81.95	calcium uniporter protein 6 [Cucumis melo var. makuwa]	[more]
KAA0046380.1	3.76e-61	86.99	calcium uniporter protein 6 [Cucumis melo var. makuwa] >TYK06541.1 calcium unipo...	[more]
KAA0057137.1	5.96e-57	77.44	calcium uniporter protein 6 [Cucumis melo var. makuwa] >TYJ97118.1 calcium unipo...	[more]
KAA0062530.1	1.15e-54	74.44	calcium uniporter protein 6 [Cucumis melo var. makuwa]	[more]
XP_008456264.1	4.75e-52	74.44	PREDICTED: calcium uniporter protein 6, mitochondrial-like [Cucumis melo] >KAA00...	[more]

BLAST of IVF0007935 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0007935.1	IVF0007935.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006816	calcium ion transport
biological_process	GO:0009987	cellular process
cellular_component	GO:0016020	membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0022857	transmembrane transporter activity