IVF0007862 (gene) Melon (IVF77) v1

Overview


Name	IVF0007862
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Plant transposase
Location	chr09: 11904027 .. 11904432 (-)
RNA-Seq Expression	IVF0007862
Synteny	IVF0007862

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAAGGAAGAAAGCAATACGGTTGCCAAAAGATGTCTTCATTTTGATTCGAAGGCACCATAAAAGAGGCTTTCTAAGAAGGGCTTAAAATCTCCTTCAAGAGGGTTACAACGAGTGAGAATGACGATTATGTCAAAGCGAGTGAAAAAGAATGAGCTACCCTCACAAAACCTGAAACGAAGCCACCGAATGATGGAGACAATCTTGATGGTACCCACACAACTCCGAGTTCACCTATACCATTTGATTCACCAGCATCTTGTACAAGAGGAGCTCTTCAAAGGTTAGCTTCTAGGGGTCAAGTTCACCAATTGTAGAGGTATCACAGGAAGAATGTGAGGATATAAATGAAGTTGAACCAAACCACACAACTCTGAGTTCACCTGTCCCACACAACTCCTAA

mRNA sequence

ATGGATAAGGAAGAAAGCAATACGGTTGCCAAAAGATGTCTTCATTTTGATTCGAAGAGGGTTACAACGAGTGAGAATGACGATTATCCACCGAATGATGGAGACAATCTTGATGGTACCCACACAACTCCGAGTTCACCTATACCATTTGATTCACCAGCATCTTGTACAAGAGGAGCTCTTCAAAGGTTAGTATCACAGGAAGAATGTGAGGATATAAATGAAGTTGAACCAAACCACACAACTCTGAGTTCACCTGTCCCACACAACTCCTAA

Coding sequence (CDS)

ATGGATAAGGAAGAAAGCAATACGGTTGCCAAAAGATGTCTTCATTTTGATTCGAAGAGGGTTACAACGAGTGAGAATGACGATTATCCACCGAATGATGGAGACAATCTTGATGGTACCCACACAACTCCGAGTTCACCTATACCATTTGATTCACCAGCATCTTGTACAAGAGGAGCTCTTCAAAGGTTAGTATCACAGGAAGAATGTGAGGATATAAATGAAGTTGAACCAAACCACACAACTCTGAGTTCACCTGTCCCACACAACTCCTAA

Protein sequence

MDKEESNTVAKRCLHFDSKRVTTSENDDYPPNDGDNLDGTHTTPSSPIPFDSPASCTRGALQRLVSQEECEDINEVEPNHTTLSSPVPHNS

Homology

[Close]

BLAST of IVF0007862 vs. ExPASy TrEMBL
Match: E5GCG1 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 5.4e-33
Identity = 86/135 (63.70%), Postives = 87/135 (64.44%), Query Frame = 0


Query: 1   MDKEESNTVAKRCLHFDSKR----------------VTTSENDDY--------------- 60
           MDKEESN VAKRCLHFDSK                 + T ENDDY               
Sbjct: 1   MDKEESNMVAKRCLHFDSKAPRKRLSKKGLKSPSRGLQTGENDDYVKASEKEGATLTKPE 60

Query: 61  --PPNDGDNLDGTHTTPSSPIPFDSPASCTRGALQRL-----------VSQEECEDINEV 92
             PPNDGDNLDGTHTTPSSPIPFDSPASCTRGALQRL           VSQEECEDINEV
Sbjct: 61  TKPPNDGDNLDGTHTTPSSPIPFDSPASCTRGALQRLASKGQVSPIVEVSQEECEDINEV 120

[Close]

BLAST of IVF0007862 vs. ExPASy TrEMBL
Match: A0A5D3DFZ8 (Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold19523G00010 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 6.0e-24
Identity = 74/132 (56.06%), Postives = 78/132 (59.09%), Query Frame = 0


Query: 1   MDKEESNTVAKRCLHFDSKR----------------VTTSENDD---------------- 60
           MDKEESNTVAKRCLHFDSK                 +  +ENDD                
Sbjct: 1   MDKEESNTVAKRCLHFDSKAPRKRRSKKSLKSPSRGLPRTENDDSVKASEKEGATLTIPE 60

Query: 61  -YPPNDGDNLDGTHTTPSSPIPFDSPASCTRGALQRL-----------VSQEECEDINEV 89
             PPNDGDNLDGTHTTPSSP+PFDSPAS TRGALQRL           VSQ   ED+NE 
Sbjct: 61  TEPPNDGDNLDGTHTTPSSPVPFDSPASRTRGALQRLASKGVVSPIVEVSQGVGEDLNES 120

[Close]

BLAST of IVF0007862 vs. ExPASy TrEMBL
Match: A0A5D3DEJ8 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold543G00110 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 6.0e-24
Identity = 74/132 (56.06%), Postives = 78/132 (59.09%), Query Frame = 0


Query: 1   MDKEESNTVAKRCLHFDSKR----------------VTTSENDD---------------- 60
           MDKEESNTVAKRCLHFDSK                 +  +ENDD                
Sbjct: 1   MDKEESNTVAKRCLHFDSKAPRKRRSKKSLKSPSRGLPRTENDDSVKASEKEGATLTIPE 60

Query: 61  -YPPNDGDNLDGTHTTPSSPIPFDSPASCTRGALQRL-----------VSQEECEDINEV 89
             PPNDGDNLDGTHTTPSSP+PFDSPAS TRGALQRL           VSQ   ED+NE 
Sbjct: 61  TEPPNDGDNLDGTHTTPSSPVPFDSPASRTRGALQRLASKGVVSPIVEVSQGVGEDLNES 120

[Close]

BLAST of IVF0007862 vs. ExPASy TrEMBL
Match: A0A5D3BM96 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00630 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.0e-23
Identity = 73/132 (55.30%), Postives = 78/132 (59.09%), Query Frame = 0


Query: 1   MDKEESNTVAKRCLHFDSKR----------------VTTSENDD---------------- 60
           MDKEESNTVAKRCLHFDSK                 +  +ENDD                
Sbjct: 1   MDKEESNTVAKRCLHFDSKAPRKRRSKKSLKSPSRGLPRTENDDSIKASEKEGATLTIPE 60

Query: 61  -YPPNDGDNLDGTHTTPSSPIPFDSPASCTRGALQRL-----------VSQEECEDINEV 89
             PPNDGDNLDGTHTTPSSP+PFDSPAS T GALQRL           VSQ   +D+NE 
Sbjct: 61  TEPPNDGDNLDGTHTTPSSPVPFDSPASRTGGALQRLASKGVVSPIVEVSQGVGKDLNEA 120

[Close]

BLAST of IVF0007862 vs. ExPASy TrEMBL
Match: A0A5A7SMK7 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G00730 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.0e-23
Identity = 73/132 (55.30%), Postives = 78/132 (59.09%), Query Frame = 0


Query: 1   MDKEESNTVAKRCLHFDSKR----------------VTTSENDD---------------- 60
           MDKEESNTVAKRCLHFDSK                 +  +ENDD                
Sbjct: 429 MDKEESNTVAKRCLHFDSKAPRKRRSKKSLKSPSRGLPRTENDDSIKASEKEGATLTIPE 488

Query: 61  -YPPNDGDNLDGTHTTPSSPIPFDSPASCTRGALQRL-----------VSQEECEDINEV 89
             PPNDGDNLDGTHTTPSSP+PFDSPAS T GALQRL           VSQ   +D+NE 
Sbjct: 489 TEPPNDGDNLDGTHTTPSSPVPFDSPASRTGGALQRLASKGVVSPIVEVSQGVGKDLNEA 548

[Close]

BLAST of IVF0007862 vs. NCBI nr
Match: ADN34160.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 152 bits (383), Expect = 3.42e-45
Identity = 86/135 (63.70%), Postives = 87/135 (64.44%), Query Frame = 0


Query: 1   MDKEESNTVAKRCLHFDSKR----------------VTTSENDDY--------------- 60
           MDKEESN VAKRCLHFDSK                 + T ENDDY               
Sbjct: 1   MDKEESNMVAKRCLHFDSKAPRKRLSKKGLKSPSRGLQTGENDDYVKASEKEGATLTKPE 60

Query: 61  --PPNDGDNLDGTHTTPSSPIPFDSPASCTRGALQRL-----------VSQEECEDINEV 91
             PPNDGDNLDGTHTTPSSPIPFDSPASCTRGALQRL           VSQEECEDINEV
Sbjct: 61  TKPPNDGDNLDGTHTTPSSPIPFDSPASCTRGALQRLASKGQVSPIVEVSQEECEDINEV 120

[Close]

BLAST of IVF0007862 vs. NCBI nr
Match: TYK22475.1 (hypothetical protein E5676_scaffold19523G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 121 bits (304), Expect = 7.96e-31
Identity = 74/132 (56.06%), Postives = 78/132 (59.09%), Query Frame = 0


Query: 1   MDKEESNTVAKRCLHFDSKR----------------VTTSENDDY--------------- 60
           MDKEESNTVAKRCLHFDSK                 +  +ENDD                
Sbjct: 1   MDKEESNTVAKRCLHFDSKAPRKRRSKKSLKSPSRGLPRTENDDSVKASEKEGATLTIPE 60

Query: 61  --PPNDGDNLDGTHTTPSSPIPFDSPASCTRGALQRL-----------VSQEECEDINEV 88
             PPNDGDNLDGTHTTPSSP+PFDSPAS TRGALQRL           VSQ   ED+NE 
Sbjct: 61  TEPPNDGDNLDGTHTTPSSPVPFDSPASRTRGALQRLASKGVVSPIVEVSQGVGEDLNES 120

[Close]

BLAST of IVF0007862 vs. NCBI nr
Match: TYK21965.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 121 bits (304), Expect = 6.94e-30
Identity = 74/132 (56.06%), Postives = 78/132 (59.09%), Query Frame = 0


Query: 1   MDKEESNTVAKRCLHFDSKR----------------VTTSENDDY--------------- 60
           MDKEESNTVAKRCLHFDSK                 +  +ENDD                
Sbjct: 1   MDKEESNTVAKRCLHFDSKAPRKRRSKKSLKSPSRGLPRTENDDSVKASEKEGATLTIPE 60

Query: 61  --PPNDGDNLDGTHTTPSSPIPFDSPASCTRGALQRL-----------VSQEECEDINEV 88
             PPNDGDNLDGTHTTPSSP+PFDSPAS TRGALQRL           VSQ   ED+NE 
Sbjct: 61  TEPPNDGDNLDGTHTTPSSPVPFDSPASRTRGALQRLASKGVVSPIVEVSQGVGEDLNES 120

[Close]

BLAST of IVF0007862 vs. NCBI nr
Match: TYK00394.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 120 bits (302), Expect = 6.99e-30
Identity = 73/132 (55.30%), Postives = 78/132 (59.09%), Query Frame = 0


Query: 1   MDKEESNTVAKRCLHFDSKR----------------VTTSENDDY--------------- 60
           MDKEESNTVAKRCLHFDSK                 +  +ENDD                
Sbjct: 1   MDKEESNTVAKRCLHFDSKAPRKRRSKKSLKSPSRGLPRTENDDSIKASEKEGATLTIPE 60

Query: 61  --PPNDGDNLDGTHTTPSSPIPFDSPASCTRGALQRL-----------VSQEECEDINEV 88
             PPNDGDNLDGTHTTPSSP+PFDSPAS T GALQRL           VSQ   +D+NE 
Sbjct: 61  TEPPNDGDNLDGTHTTPSSPVPFDSPASRTGGALQRLASKGVVSPIVEVSQGVGKDLNEA 120

[Close]

BLAST of IVF0007862 vs. NCBI nr
Match: KAA0025471.1 (uncharacterized protein E6C27_scaffold417G00730 [Cucumis melo var. makuwa])

HSP 1 Score: 120 bits (302), Expect = 2.14e-29
Identity = 73/132 (55.30%), Postives = 78/132 (59.09%), Query Frame = 0


Query: 1   MDKEESNTVAKRCLHFDSKR----------------VTTSENDDY--------------- 60
           MDKEESNTVAKRCLHFDSK                 +  +ENDD                
Sbjct: 429 MDKEESNTVAKRCLHFDSKAPRKRRSKKSLKSPSRGLPRTENDDSIKASEKEGATLTIPE 488

Query: 61  --PPNDGDNLDGTHTTPSSPIPFDSPASCTRGALQRL-----------VSQEECEDINEV 88
             PPNDGDNLDGTHTTPSSP+PFDSPAS T GALQRL           VSQ   +D+NE 
Sbjct: 489 TEPPNDGDNLDGTHTTPSSPVPFDSPASRTGGALQRLASKGVVSPIVEVSQGVGKDLNEA 548

The following BLAST results are available for this feature:

BLAST of IVF0007862 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0007862 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GCG1	5.4e-33	63.70	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5D3DFZ8	6.0e-24	56.06	Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3DEJ8	6.0e-24	56.06	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold543G00...	[more]
A0A5D3BM96	1.0e-23	55.30	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G0...	[more]
A0A5A7SMK7	1.0e-23	55.30	Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of IVF0007862 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN34160.1	3.42e-45	63.70	hypothetical protein [Cucumis melo subsp. melo]	[more]
TYK22475.1	7.96e-31	56.06	hypothetical protein E5676_scaffold19523G00010 [Cucumis melo var. makuwa]	[more]
TYK21965.1	6.94e-30	56.06	Plant transposase [Cucumis melo var. makuwa]	[more]
TYK00394.1	6.99e-30	55.30	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0025471.1	2.14e-29	55.30	uncharacterized protein E6C27_scaffold417G00730 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0007862 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..52

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0007862.1	IVF0007862.1	mRNA