IVF0007773 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTCAATCGCTATAAGTTATACTCTGATTACCAAACAAACTTTCAATTCTTTTTGTTCTTCGTTATTCATTGTCGAAAATGTCTTGCTGTGGTGGAAACTGTGGATGCGGCTCTGCCTGCAAGTGCGGAAATGGCTGTGGAGGGTGAGTAATCTCTCACCAATTAACTCTTTTGAATTTGATCGAGTGAAATTGCTTTTAGTTCTTATGATTCTGTGGAGAGCATGATATCTCGAGAATCTGATCTTCTTTTTCTTTATATCGCTTTCGATTTCTTTATCTTCTGCGTATCTTTGTTCCTCGTTCGATGGCGATCAGATCATTTGCCGATTCTCTTCATTCGTACGACGATCAAGGCGGATTTTCTTGTGAAATTTCTGAAAATGACTACGGTGTTCATTTCACCTGAGGATAATCGCGATGATTCTGACTTTTTGATATTTTTTTATGCAGATGCAAGAGTTTCCCTGACTTGAGCTTCTCAGAGACCACTGCTACGATCGAGACTTTCGTAGTCGGTTTCGCACCTCAGAAGATGTAAGTATCCACAATTACGCCTAATTTTTAAACAAGTTTAGGTATTTAGTGATGATTTTATTTAACGGTTTCGGCCTTTTCGATATCAGGTCCTACGAGGTAGCAGAGATGGGAGCCGAGAACGGCTGCAAGTGCGGTGACAACTGCACCTGCGATCCATGCACCTGTAAATGAGCAGCAGCAGCAGCAAAAACAGCTCGAATCTTCTTAAGTGGAGATTGTGTTCGAGTACTAATAGTATGCATCCTTCTTAATAACAATTATAAAACCTCCAAGCGTTTTCGTTCTCTGTTGTGTTGCGTCTTTTTAAGTGTCGATTGTAGCGTTCCGTTGAATAATAGCAGTCATGGAGTTGTGGAAAAACTTTATATGCTGTTATAAGGTTCAGTCGGTGATGTTTTTAGCTCTTTAATCCCGTGTTCATCCATGTCTGTTTAGTATTTGCTTCGCCCTCTGTAAGAAATTTAAGAAATAGTATGTGCTAATTTATGAGAAGTTACAGAGTTTCTTTCATCATCAATAGCTAATCTACGGTTGAAAATGATGAACAATAGTTTGAATCTTCTCGAAAAATCTTGACGTGATAAATATCTCCAAATCTTGATCTCAATCACTATCCTGAATTTTAATATTTGGAAATGAAGAACAGAATTCTCACATTTTCGGTGGTGGGGACGATTGAATAGTTAAGCACCATTCGTTCCAAAACGATGTATATCCATCCAAAATTAAATGCGTATTTGCGTGTCCTTGTGAAATCTTTCCTGTGATGGCCAAACTTTTTAATGGTATATAGTTTTGGAAATTGATCAATTTTTTCTGGCTAGTTTTGTCCTCTTGCTTTCAAGGATTTGGTTAGCACGTCGTTGTTCCTTCATTGAACATTGAAGCGTTTCTTCGTTTTCGTAAAACTTATCGTTACAACACATTGAGTCGGTGTCTTTAGAGATCAATTTTTTCTTTTCTTTTTTCTTTAAATGGAC GTTCAATCGCTATAAGTTATACTCTGATTACCAAACAAACTTTCAATTCTTTTTGTTCTTCGTTATTCATTGTCGAAAATGTCTTGCTGTGGTGGAAACTGTGGATGCGGCTCTGCCTGCAAGTGCGGAAATGGCTGTGGAGGATGCAAGAGTTTCCCTGACTTGAGCTTCTCAGAGACCACTGCTACGATCGAGACTTTCGTAGTCGGTTTCGCACCTCAGAAGATGTCCTACGAGGTAGCAGAGATGGGAGCCGAGAACGGCTGCAAGTGCGGTGACAACTGCACCTGCGATCCATGCACCTGTAAATGAGCAGCAGCAGCAGCAAAAACAGCTCGAATCTTCTTAAGTGGAGATTGTGTTCGAGTACTAATAGTATGCATCCTTCTTAATAACAATTATAAAACCTCCAAGCGTTTTCGTTCTCTGTTGTGTTGCGTCTTTTTAAGTGTCGATTGTAGCGTTCCGTTGAATAATAGCAGTCATGGAGTTGTGGAAAAACTTTATATGCTGTTATAAGGTTCAGTCGGTGATGTTTTTAGCTCTTTAATCCCGTGTTCATCCATGTCTGTTTAGTATTTGCTTCGCCCTCTGTAAGAAATTTAAGAAATAGTATGTGCTAATTTATGAGAAGTTACAGAGTTTCTTTCATCATCAATAGCTAATCTACGGTTGAAAATGATGAACAATAGTTTGAATCTTCTCGAAAAATCTTGACGTGATAAATATCTCCAAATCTTGATCTCAATCACTATCCTGAATTTTAATATTTGGAAATGAAGAACAGAATTCTCACATTTTCGGTGGTGGGGACGATTGAATAGTTAAGCACCATTCGTTCCAAAACGATGTATATCCATCCAAAATTAAATGCGTATTTGCGTGTCCTTGTGAAATCTTTCCTGTGATGGCCAAACTTTTTAATGGTATATAGTTTTGGAAATTGATCAATTTTTTCTGGCTAGTTTTGTCCTCTTGCTTTCAAGGATTTGGTTAGCACGTCGTTGTTCCTTCATTGAACATTGAAGCGTTTCTTCGTTTTCGTAAAACTTATCGTTACAACACATTGAGTCGGTGTCTTTAGAGATCAATTTTTTCTTTTCTTTTTTCTTTAAATGGAC ATGTCTTGCTGTGGTGGAAACTGTGGATGCGGCTCTGCCTGCAAGTGCGGAAATGGCTGTGGAGGATGCAAGAGTTTCCCTGACTTGAGCTTCTCAGAGACCACTGCTACGATCGAGACTTTCGTAGTCGGTTTCGCACCTCAGAAGATGTCCTACGAGGTAGCAGAGATGGGAGCCGAGAACGGCTGCAAGTGCGGTGACAACTGCACCTGCGATCCATGCACCTGTAAATGA MSCCGGNCGCGSACKCGNGCGGCKSFPDLSFSETTATIETFVVGFAPQKMSYEVAEMGAENGCKCGDNCTCDPCTCK Homology
BLAST of IVF0007773 vs. ExPASy Swiss-Prot
Match: Q40158 (Metallothionein-like protein type 2 B OS=Solanum lycopersicum OX=4081 GN=MTB PE=2 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 1.8e-26 Identity = 52/80 (65.00%), Postives = 64/80 (80.00%), Query Frame = 0
BLAST of IVF0007773 vs. ExPASy Swiss-Prot
Match: P30564 (Metallothionein-like protein type 2 OS=Ricinus communis OX=3988 GN=MTI PE=3 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 1.8e-26 Identity = 56/81 (69.14%), Postives = 62/81 (76.54%), Query Frame = 0
BLAST of IVF0007773 vs. ExPASy Swiss-Prot
Match: Q41657 (Metallothionein-like protein type 2 OS=Vicia faba OX=3906 GN=MTI PE=2 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 3.1e-26 Identity = 55/78 (70.51%), Postives = 65/78 (83.33%), Query Frame = 0
BLAST of IVF0007773 vs. ExPASy Swiss-Prot
Match: P43398 (Metallothionein-like protein 2 OS=Trifolium repens OX=3899 GN=MT1A PE=3 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 6.8e-26 Identity = 57/78 (73.08%), Postives = 63/78 (80.77%), Query Frame = 0
BLAST of IVF0007773 vs. ExPASy Swiss-Prot
Match: P43390 (Metallothionein-like protein type 2 OS=Actinidia deliciosa OX=3627 GN=pKIWI504 PE=2 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 8.9e-26 Identity = 55/79 (69.62%), Postives = 63/79 (79.75%), Query Frame = 0
BLAST of IVF0007773 vs. ExPASy TrEMBL
Match: A0A1S3B6L7 (metallothionein-like protein type 2 OS=Cucumis melo OX=3656 GN=LOC103486389 PE=3 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 1.2e-38 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of IVF0007773 vs. ExPASy TrEMBL
Match: A0A0A0LAK4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734260 PE=3 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 1.1e-37 Identity = 75/77 (97.40%), Postives = 76/77 (98.70%), Query Frame = 0
BLAST of IVF0007773 vs. ExPASy TrEMBL
Match: A0A5D3DP05 (Metallothionein-like protein type 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001700 PE=3 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 3.1e-37 Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0
BLAST of IVF0007773 vs. ExPASy TrEMBL
Match: A0A6J1I8Z4 (metallothionein-like protein type 2 OS=Cucurbita maxima OX=3661 GN=LOC111470252 PE=3 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 4.4e-36 Identity = 72/77 (93.51%), Postives = 74/77 (96.10%), Query Frame = 0
BLAST of IVF0007773 vs. ExPASy TrEMBL
Match: A0A6J1GBI9 (metallothionein-like protein type 2 OS=Cucurbita moschata OX=3662 GN=LOC111452655 PE=3 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 4.4e-36 Identity = 72/77 (93.51%), Postives = 74/77 (96.10%), Query Frame = 0
BLAST of IVF0007773 vs. NCBI nr
Match: XP_008442554.1 (PREDICTED: metallothionein-like protein type 2 [Cucumis melo]) HSP 1 Score: 167 bits (422), Expect = 3.62e-52 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of IVF0007773 vs. NCBI nr
Match: XP_004137793.1 (metallothionein-like protein type 2 isoform X2 [Cucumis sativus] >KGN58873.1 hypothetical protein Csa_000742 [Cucumis sativus]) HSP 1 Score: 164 bits (414), Expect = 6.03e-51 Identity = 75/77 (97.40%), Postives = 76/77 (98.70%), Query Frame = 0
BLAST of IVF0007773 vs. NCBI nr
Match: KAA0044088.1 (metallothionein-like protein type 2 [Cucumis melo var. makuwa] >TYK25049.1 metallothionein-like protein type 2 [Cucumis melo var. makuwa]) HSP 1 Score: 162 bits (409), Expect = 4.05e-50 Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0
BLAST of IVF0007773 vs. NCBI nr
Match: XP_022949247.1 (metallothionein-like protein type 2 [Cucurbita moschata] >XP_022971579.1 metallothionein-like protein type 2 [Cucurbita maxima] >XP_023538679.1 metallothionein-like protein type 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 158 bits (400), Expect = 8.27e-49 Identity = 72/77 (93.51%), Postives = 74/77 (96.10%), Query Frame = 0
BLAST of IVF0007773 vs. NCBI nr
Match: KAG6596409.1 (Metallothionein-like protein type 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027952.1 Metallothionein-like protein type 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 158 bits (399), Expect = 1.18e-48 Identity = 72/77 (93.51%), Postives = 74/77 (96.10%), Query Frame = 0
BLAST of IVF0007773 vs. TAIR 10
Match: AT3G09390.1 (metallothionein 2A ) HSP 1 Score: 110.9 bits (276), Expect = 4.5e-25 Identity = 55/81 (67.90%), Postives = 59/81 (72.84%), Query Frame = 0
BLAST of IVF0007773 vs. TAIR 10
Match: AT5G02380.1 (metallothionein 2B ) HSP 1 Score: 95.5 bits (236), Expect = 2.0e-20 Identity = 53/81 (65.43%), Postives = 59/81 (72.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|