IVF0007765 (gene) Melon (IVF77) v1

Overview


Name	IVF0007765
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr10: 21710282 .. 21716012 (-)
RNA-Seq Expression	IVF0007765
Synteny	IVF0007765

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTATATCCTATATCTAATCGTTTTGTTCATTGTTCATGTCATGATCTCTCAACTCTTTAGGTGCACTTCCTTTTACATGTGAGTTTGGAAACAAAATGCTTTCACTTTTGTAACCCTCTTTCAAGCACTTATTACCTGTCTCATTCCAAGCCCAACCCAAAGAATTTCATAGGAAAATTGCCATAATTACCATGCATTTGTAGAGCTTTCAATTCAGTGTCAGTATAATTTTCATTTAAATAAAACGTTATAAAAATTTTCTAACATAAACAATAGTATTTGTTGCAAATATATAATTAAAATGTTAAGTTTTCATAATGCTTTTCTATCCCTGCCCCTTTCCCATTCAGTGTCAGTATAATTTTCATTTAAATAACACGTTATAAAAATTTTCTAACATAAACAATAGTATTTGTTGCAAATATATAATTAAAATGTTAAGTTTTCATAATGCTTTTCTAACTTGAATATTACAACATTGAGTTTATGAGTTAGAGTGTTTATTTTAGAGCTATTTATGTATGAATAATTAAATGGGTATCCACTTAGTTCACAACTCCCTCCAGATTCCTGGTGTAATTGAAGATTATCTCTCTCGTTTGAGAAAGAATAAATGAAAAACAAAATCACCTTTAGGTTCCAACATGGATCGAATTTTGATCATATACACTTCTTTTTAACCGTTCATATGATTTGCTGTTCGTGCTTCAAACAGATTACTTCTCCTTCTCTTTCGAAGTAAAGAATACATGTAGGAATTGATTGAAACTCCATTGCCCAAGGTAAAGAAGGGGAAGATAAATTGCATTTAGAACACAAAGTTGATGAAGATTGTTATCTTGGGATAAATGATCATCAACTTATATCATTTTAATTCTTTAATTCCATATTTTGATGCAGTATGCTTATTATTTCTCTCCATAATCAGAAAAGTTGTTTGAACTTAATATGAAATTGTTATCTTGGGATCGTGGGAAGGTAATAGAAACTTCCATCATGTCTGTAACATTTACCTTGACTTGTAAGCTTTCCAGAAGTTTCCCTTTTGCTATATAGGATGCCTATAACCCAATTTTTTTTAACTTTTATGCCTTAGACAAACTTATTGTTTTGAAAGAAAAAAAACAGAGAAAAAAAAATCAATATGACCACTAATGTTACTTTCATTTTTTCCTTTTCACAACCAAGGTTAAGTGGAAATCCTGGAATGACAATGGACTGGCAAGGTGCTCCTGCAAGCCCTAGTTCATTTACTGTAAAGAGGATTTTGCGTTTGGAAATTCCAGTGGACACATATCCGAATGTAAATTCAATAAAGAAGTGTCTCTGTATGCGGTTTCTGAAATCCTTTCAGAATGTGGATTATTTAACACTTTAATTTGTCTTGTTCCTTGGATGGCAGTTCAATTTTGTTGGACGGCTTCTTGGACCGAGAGGCAATTCTCTGAAGCGGGTAGAAGCTACTACAGGATGTCGTGTGTATATCAGAGGAAAGGGGTCAATTAAAGATCCAGAGAAGGTATTTTAGGTGAAATTGCTTGGATGAAACACTTGAGTAAATTGCTCACTCTAAGTGATCACTTAAAATTTTTTCCATTGGGTGTTTCTTATTGTGTTTGATGATAGTCATATCAGTATCTGCGTATGTTTAATATTGGGCTATCTGGTTATTTATTTCTTTATCTATGACTGTTTTAAATTCTCAAGGAAAAGAAACTCCGAGGAAGACTTGGTTATGAACATCTGAACGAACCACTGCATGTCCTAATTGAGGTTGATTTACCAGCCAATATCATTGATATCAAGCTGAGACAGGCACAAGAAATTATAGAACTACTTAAACCCGTGGTACTGTTTACTTTCCAACCTAATTCTATCAAGTTTAATTTTGTTTATGATGGGATGGGCCCAATAGATGGCATTTACCTTGACATGCAAATGGGTATTCTCTCTCAAATACAAACTGTATGGTTATTCTATATAAATGGTTTATTTGGATATTGTTTGTAGATAATTGAAGTCATATCGGGTTGAAAGCTAAGCGATTGTGCAGAGATTGCCAAGCGACCGTTGAAAATTGAAGACTGAGAAGACATTTAGGATTTTTAATTATTTAATTCTTGTATTATAATCTTTTTTCATGTACAATTGTAGAATGTATATACATAATATTAAGATTTTATTTTGTGTATTCAATGTAAAAGACAAATATTATAGTTTCTAACATAATATGAATTTCATTGATTTGTTGGCGTGTGAAAAACATATTTATCTATATTGATCCAATGTCGGTCTATAGGACAATAATGTGACAATTAAATAAAAATAAATTTGTAAAAATGAATCCAAAAACTAGGCTTTAATGTCAGTTTTAAACCGACATCAAAGTTCAACCGACATTAAAGGGCTTCAATAACACTATCAAAGATGTCGGTTGAAAACTGACAAACCGACATTAAAGAGGCCTTTAATGTCGTTTTTAAACCGACATTAAAGCCCAACTGACATTAAAGGGCATCAATAACACCATCAAAGATGTCGGTTGAAAACTGACATTAAAGGCCTTTAATGTCGTTTTTAACCCGACATTAAAGAGGCCTTTAATGTCGTTTTTAAACCGACATTAAAGCCCAACCGACATTAAAGGCCTTTAATAATGCTCACAAAGATGTCGGTTGCCAAGTGACATTAAAGGCCTTTAATGTCGGTTTTAAACCGACATTAAAGGCCAAAATTCTTCTAGTGATAGGTCACATAATCGAATCAAACTGATGTATAAATGGATTTGATCGATCTCATGGTCCACAGATTCTTCAAATACATGCAATCTATAAAGAAAATTAAAGATAATGAAGTTTTTAAATATACTTTATTAAGTGTATCATACAACAATGAACATTTATATTTCTAGAAGTTAGTGTTTAGCAAGGAAAATTTTTACCGAGTTCAGAAAGAAGGCTATCATGTTCCAAATGAATTTTGAGCAAGCTGTGAAGGACCTTTTCCTGAGAGTATGAACTCAAGTATGCAAATCAAAGTCATAGAAGAAAGCTTGGAAGTTATGCTTTTCCATGATTTTAAAGAGATGACAAATATCAGAATCTGACCAGGATTGGGAAGTTCTGGTCATTACAGGAGAATAAATTGTCAATATAATTGCAAAGCGGCTCCATATAGATTAAATGGTATATTGTGACACAATACATTTGAATGAAAATTAATTTAAAAATAAATCCGTGCAGATAAGAAATAGAGTACAAAATTAGAATTGATGATTGAGAGATTGAAGATGTTGCCATACATACCAAGTTTAATATTGTCATCTACCTTAATAGTCTCCATAAGTCAAGGTCTTCAATTAGCGTGAGCTCAGAATATTAGACTTTCTTAGTAATATATACTATGCTTCTTTTAAAGAAGATATGGGATGGCAATGTTGAAAATTAAACATGTTTTAAATAAATAAGTTATATGTGAGTTAATTTATGTAAGTTAGAGAAGGATGTGAGTTAAAAATGTTAGAGTTAATTTAGTAAGAGTTTCACCTTAGTTAAATGTAGGATTTAATTTGTTGTATTTAATTGTAATATGAGTTATTCTTATGACAATCCTATAAATAGGATTAAAATGCTGTAATCTAAATCATCCAAGTGTGAGTTGAATACACACAACAAGTCTTCCAAAAAGTTTTTATTTTCTATCAAATATTCTATTTGGTGATTATTTGTTTGGGGTGTTCATCAAACGCTTCCAACAAAGTGGTATCAGAGCTTAAGTTTGGAGTCAAAAAAATTGGTTTTGCAAATGGCAAACAACAATTTAGTTCCCTTCCAAGTACCTCGACTTATGAAAGATAATTATAGTAGTTGGTGTATTCGAATGAAAGCTTTACTTGGTTCACAAGATGTGTGGGACATTGTTAGTAATTGTTATGAAGAAACAGAAAGTGATGCAGCTTTGAATCAAGCTCAACGAGAAGCTTTACAAAATACAAGAAAAAAAGATCAAAAGGCTCTCACCATCATTCATCAAGTCATTGATGATAACAATTTTCAGAAAAATTTCTGGAGCAACTACTGCATTTTAAGCATGGCAAATTTTGGAGAATACTTATAAAGGAGTAGATCGAGTCAAGAAGGTTCGCCTTCAAAAGTTGAGAGGTGATTATGAATCACTACATATGAAGGAGTCTGAATTAGTTTCAGATTATACTTCAAGATTGCTAGCAGTAGTAAATGAAATGAAAAGATTTGGTGAGACAATAAGCGATGAGCAAGTAGTAGAAAAGATACTTCGCTCATTGAATGAAAAATTTAATTTCATCGTTGTAGCTATTGAAGAATCAAAGGATTTGAGTACAATGTCCATTGATCAACTTATGGGTTCTTTACAAGCCCATGAAGAGAAGCTTCTTAAGAAGAATAAGCAGATGACTGAGCAACTTTTTCAATCAAAGTTGAAATTAAAAGACAAGGAAGATAGCCTAGAAAAAGGAAATCGAGGTCGAGGACGTGATGGTAATCGTGGACGTGGTGATTTCAAAGATCGAGGTCAAGGAAGCTATGATCAAAGAAAATTTGATGAGAGTAATTCAAACTCAAATTCATCAAGAGGTAGAGGAAGACAACATTATTCGAGGTCAAGTGGGGAAAGATCAAATAATGACAGGAGGTATGACAAAAGACAGGTTGAATATTATAATTTTCATAAATTCGGCCATTATTCTTGGGAATACAGAAATAAAGTTGAAGAAAATGCAAATTATGCTGAGAAAGATGAAGAAAGCGGTGATTCCTCATTGTTTCTAGCATGCAAAGGTGCGAAAACATGTGAAAACAGTGCATGGTATCTCGATAGTGGTGCAAGCAATCACATGTGTGGAAGTAAATCAATGTTCGTGAAACTTGATAAATCTGTTGGTGGAAAAGGTAAAATTTTGATCAATTTGAAGAATGGGAAGCATGAGTTTATCTCTAATGTTTATTATGTGCCTTATATGAAAAACAACATTTTGAGTTTGGGGCAACTCTTAGAGAAAGGCTATAATATTTTGATGAAGGATTATAGTCTTTTGATAAGAGATAATCATGACAAAATTATTGCTAAAGTGCAAATGACAGAAAATAGAATGTTTTTATTAAACATTCAAACTGATGTTGCTCAATGTTTAAAGTCATGTTTGAAAGATCCCAATTGGATTTGGCACTTGAGATTTGGGCTTTTGAACTTTGATGGCTTAAGATTATTAGCCAGGAAGAACATGGTGAAAGGGTTGCCATATGTCAAACATCCAGATCAACTTTGTGAAGGTTGTCTTCATGGCAAACAATTAAGGAAGAGTTTTCCACAAGAATCATCTTCGAGACCAAGGAGACCACTAGAGTTAGTTCACACGGATCTTTGTGGACCGATCAAACCAAGTTCTTTTGGTCATAATAATTCTTTCTTATTATTTATTGATGATTTCAGTCGAAAAACTTGGGTTTACTTTGTCAAGGAGAAATCAGAAGTATTTGGCATGTTCAAGAGATTTAAAGCTCTTGTTGAAAAAGAAAGTGGTTATTACATTAAAGCTTTGAGATCAGACAGGGAAGGTGAATTCATTTCAAATGAATTCAAAACTTTTTGCGTAGAAAACGGAATTCGTCGACCTAAGACAGTTCCATTTACTCCTCAACAAAATGGTGTTGTTGAAAGGAAGAACCGAACAACACTTCACATGGCTTGA

mRNA sequence

ATGCTATATCCTATATCTAATCGTTTTGTGCACTTCCTTTTACATGTGAGTTTGGAAACAAAATGCTTTCACTTTTGTAACCCTCTTTCAAGCACTTATTACCTGTCTCATTCCAAGCCCAACCCAAAGAATTTCATAGGAAAATTGTTAAGTGGAAATCCTGGAATGACAATGGACTGGCAAGGTGCTCCTGCAAGCCCTAGTTCATTTACTGTAAAGAGGATTTTGCGTTTGGAAATTCCAGTGGACACATATCCGAATTTCAATTTTGTTGGACGGCTTCTTGGACCGAGAGGCAATTCTCTGAAGCGGGTAGAAGCTACTACAGGATGTCGTGTGTATATCAGAGGAAAGGGGTCAATTAAAGATCCAGAGAAGGAAAAGAAACTCCGAGGAAGACTTGGTTATGAACATCTGAACGAACCACTGCATGTCCTAATTGAGGTTGATTTACCAGCCAATATCATTGATATCAAGCTGAGACAGGCACAAGAAATTATAGAACTACTTAAACCCGTGAATACTTATAAAGGAGTAGATCGAGTCAAGAAGGTTCGCCTTCAAAAGTTGAGAGGTGATTATGAATCACTACATATGAAGGAGTCTGAATTAGTTTCAGATTATACTTCAAGATTGCTAGCAGTAGTAAATGAAATGAAAAGATTTGGTGAGACAATAAGCGATGAGCAAGTAGTAGAAAAGATACTTCGCTCATTGAATGAAAAATTTAATTTCATCGTTGTAGCTATTGAAGAATCAAAGGATTTGAGTACAATGTCCATTGATCAACTTATGGGTTCTTTACAAGCCCATGAAGAGAAGCTTCTTAAGAAGAATAAGCAGATGACTGAGCAACTTTTTCAATCAAAGTTGAAATTAAAAGACAAGGAAGATAGCCTAGAAAAAGGAAATCGAGGTCGAGGACGTGATGGTAATCGTGGACGTGGTGATTTCAAAGATCGAGGTCAAGGAAGCTATGATCAAAGAAAATTTGATGAGAGTAATTCAAACTCAAATTCATCAAGAGGTAGAGGAAGACAACATTATTCGAGGTCAAGTGGGGAAAGATCAAATAATGACAGGAGGTATGACAAAAGACAGGTTGAATATTATAATTTTCATAAATTCGGCCATTATTCTTGGGAATACAGAAATAAAGTTGAAGAAAATGCAAATTATGCTGAGAAAGATGAAGAAAGCGGTGATTCCTCATTGTTTCTAGCATGCAAAGGTGCGAAAACATGTGAAAACAGTGCATGGTATCTCGATAGTGGTGCAAGCAATCACATGTGTGGAAGTAAATCAATGTTCGTGAAACTTGATAAATCTGTTGGTGGAAAAGGTAAAATTTTGATCAATTTGAAGAATGGGAAGCATGAGTTTATCTCTAATGTTTATTATGTGCCTTATATGAAAAACAACATTTTGAGTTTGGGGCAACTCTTAGAGAAAGGCTATAATATTTTGATGAAGGATTATAGTCTTTTGATAAGAGATAATCATGACAAAATTATTGCTAAAGTGCAAATGACAGAAAATAGAATGTTTTTATTAAACATTCAAACTGATGTTGCTCAATGTTTAAAGTCATGTTTGAAAGATCCCAATTGGATTTGGCACTTGAGATTTGGGCTTTTGAACTTTGATGGCTTAAGATTATTAGCCAGGAAGAACATGGTGAAAGGGTTGCCATATGTCAAACATCCAGATCAACTTTGTGAAGGTTGTCTTCATGGCAAACAATTAAGGAAGAGTTTTCCACAAGAATCATCTTCGAGACCAAGGAGACCACTAGAGTTAGTTCACACGGATCTTTGTGGACCGATCAAACCAAGTTCTTTTGGTCATAATAATTCTTTCTTATTATTTATTGATGATTTCAGTCGAAAAACTTGGGTTTACTTTGTCAAGGAGAAATCAGAAGTATTTGGCATGTTCAAGAGATTTAAAGCTCTTGTTGAAAAAGAAAGTGGTTATTACATTAAAGCTTTGAGATCAGACAGGGAAGGTGAATTCATTTCAAATGAATTCAAAACTTTTTGCGTAGAAAACGGAATTCGTCGACCTAAGACAGTTCCATTTACTCCTCAACAAAATGGTGTTGTTGAAAGGAAGAACCGAACAACACTTCACATGGCTTGA

Coding sequence (CDS)

ATGCTATATCCTATATCTAATCGTTTTGTGCACTTCCTTTTACATGTGAGTTTGGAAACAAAATGCTTTCACTTTTGTAACCCTCTTTCAAGCACTTATTACCTGTCTCATTCCAAGCCCAACCCAAAGAATTTCATAGGAAAATTGTTAAGTGGAAATCCTGGAATGACAATGGACTGGCAAGGTGCTCCTGCAAGCCCTAGTTCATTTACTGTAAAGAGGATTTTGCGTTTGGAAATTCCAGTGGACACATATCCGAATTTCAATTTTGTTGGACGGCTTCTTGGACCGAGAGGCAATTCTCTGAAGCGGGTAGAAGCTACTACAGGATGTCGTGTGTATATCAGAGGAAAGGGGTCAATTAAAGATCCAGAGAAGGAAAAGAAACTCCGAGGAAGACTTGGTTATGAACATCTGAACGAACCACTGCATGTCCTAATTGAGGTTGATTTACCAGCCAATATCATTGATATCAAGCTGAGACAGGCACAAGAAATTATAGAACTACTTAAACCCGTGAATACTTATAAAGGAGTAGATCGAGTCAAGAAGGTTCGCCTTCAAAAGTTGAGAGGTGATTATGAATCACTACATATGAAGGAGTCTGAATTAGTTTCAGATTATACTTCAAGATTGCTAGCAGTAGTAAATGAAATGAAAAGATTTGGTGAGACAATAAGCGATGAGCAAGTAGTAGAAAAGATACTTCGCTCATTGAATGAAAAATTTAATTTCATCGTTGTAGCTATTGAAGAATCAAAGGATTTGAGTACAATGTCCATTGATCAACTTATGGGTTCTTTACAAGCCCATGAAGAGAAGCTTCTTAAGAAGAATAAGCAGATGACTGAGCAACTTTTTCAATCAAAGTTGAAATTAAAAGACAAGGAAGATAGCCTAGAAAAAGGAAATCGAGGTCGAGGACGTGATGGTAATCGTGGACGTGGTGATTTCAAAGATCGAGGTCAAGGAAGCTATGATCAAAGAAAATTTGATGAGAGTAATTCAAACTCAAATTCATCAAGAGGTAGAGGAAGACAACATTATTCGAGGTCAAGTGGGGAAAGATCAAATAATGACAGGAGGTATGACAAAAGACAGGTTGAATATTATAATTTTCATAAATTCGGCCATTATTCTTGGGAATACAGAAATAAAGTTGAAGAAAATGCAAATTATGCTGAGAAAGATGAAGAAAGCGGTGATTCCTCATTGTTTCTAGCATGCAAAGGTGCGAAAACATGTGAAAACAGTGCATGGTATCTCGATAGTGGTGCAAGCAATCACATGTGTGGAAGTAAATCAATGTTCGTGAAACTTGATAAATCTGTTGGTGGAAAAGGTAAAATTTTGATCAATTTGAAGAATGGGAAGCATGAGTTTATCTCTAATGTTTATTATGTGCCTTATATGAAAAACAACATTTTGAGTTTGGGGCAACTCTTAGAGAAAGGCTATAATATTTTGATGAAGGATTATAGTCTTTTGATAAGAGATAATCATGACAAAATTATTGCTAAAGTGCAAATGACAGAAAATAGAATGTTTTTATTAAACATTCAAACTGATGTTGCTCAATGTTTAAAGTCATGTTTGAAAGATCCCAATTGGATTTGGCACTTGAGATTTGGGCTTTTGAACTTTGATGGCTTAAGATTATTAGCCAGGAAGAACATGGTGAAAGGGTTGCCATATGTCAAACATCCAGATCAACTTTGTGAAGGTTGTCTTCATGGCAAACAATTAAGGAAGAGTTTTCCACAAGAATCATCTTCGAGACCAAGGAGACCACTAGAGTTAGTTCACACGGATCTTTGTGGACCGATCAAACCAAGTTCTTTTGGTCATAATAATTCTTTCTTATTATTTATTGATGATTTCAGTCGAAAAACTTGGGTTTACTTTGTCAAGGAGAAATCAGAAGTATTTGGCATGTTCAAGAGATTTAAAGCTCTTGTTGAAAAAGAAAGTGGTTATTACATTAAAGCTTTGAGATCAGACAGGGAAGGTGAATTCATTTCAAATGAATTCAAAACTTTTTGCGTAGAAAACGGAATTCGTCGACCTAAGACAGTTCCATTTACTCCTCAACAAAATGGTGTTGTTGAAAGGAAGAACCGAACAACACTTCACATGGCTTGA

Protein sequence

MLYPISNRFVHFLLHVSLETKCFHFCNPLSSTYYLSHSKPNPKNFIGKLLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEKKLRGRLGYEHLNEPLHVLIEVDLPANIIDIKLRQAQEIIELLKPVNTYKGVDRVKKVRLQKLRGDYESLHMKESELVSDYTSRLLAVVNEMKRFGETISDEQVVEKILRSLNEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQMTEQLFQSKLKLKDKEDSLEKGNRGRGRDGNRGRGDFKDRGQGSYDQRKFDESNSNSNSSRGRGRQHYSRSSGERSNNDRRYDKRQVEYYNFHKFGHYSWEYRNKVEENANYAEKDEESGDSSLFLACKGAKTCENSAWYLDSGASNHMCGSKSMFVKLDKSVGGKGKILINLKNGKHEFISNVYYVPYMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAKVQMTENRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGLLNFDGLRLLARKNMVKGLPYVKHPDQLCEGCLHGKQLRKSFPQESSSRPRRPLELVHTDLCGPIKPSSFGHNNSFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDREGEFISNEFKTFCVENGIRRPKTVPFTPQQNGVVERKNRTTLHMA

Homology

[Close]

BLAST of IVF0007765 vs. ExPASy Swiss-Prot
Match: Q9ZVI3 (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38610 PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 3.3e-58
Identity = 114/142 (80.28%), Postives = 128/142 (90.14%), Query Frame = 0


Query: 50  LSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATT 109
           LSG PGMTMDWQGAP SPSS+TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVEATT
Sbjct: 112 LSGTPGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATT 171

Query: 110 GCRVYIRGKGSIKDPEKEKKLRGRLGYEHLNEPLHVLIEVDLPANIIDIKLRQAQEII-E 169
           GCRV+IRGKGSIKDPEKE KLRGR GYEHLNE LH+LIE DLPA+I++I+LRQAQEII E
Sbjct: 172 GCRVFIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEE 231

Query: 170 LLKPVNTYKGVDRVKKVRLQKL 191
           LLKPV+  +  D +K+ +L++L
Sbjct: 232 LLKPVD--ESQDFIKRQQLREL 251

[Close]

BLAST of IVF0007765 vs. ExPASy Swiss-Prot
Match: Q8GYR4 (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 5.8e-55
Identity = 107/142 (75.35%), Postives = 126/142 (88.73%), Query Frame = 0


Query: 50  LSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATT 109
           + G  GM M+WQGAPASPSS+ VKRILRL++PVDTYPNFNFVGRLLGPRGNSLKRVEATT
Sbjct: 111 IGGPHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATT 170

Query: 110 GCRVYIRGKGSIKDPEKEKKLRGRLGYEHLNEPLHVLIEVDLPANIIDIKLRQAQEII-E 169
           GCRVYIRGKGSIKDPEKE+KL+G+ GYEHLNE LH+LIE DLP +I+DIKLRQAQEII E
Sbjct: 171 GCRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEE 230

Query: 170 LLKPVNTYKGVDRVKKVRLQKL 191
           L+KPV+  +  D +K+ +L++L
Sbjct: 231 LVKPVD--ESQDYIKRQQLREL 250

[Close]

BLAST of IVF0007765 vs. ExPASy Swiss-Prot
Match: Q75GR5 (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPIN1 PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 3.7e-49
Identity = 106/173 (61.27%), Postives = 133/173 (76.88%), Query Frame = 0


Query: 23  FHFCNPLSSTYYLSHSKPN---PKNFIGKLLSGNP-GMTMDWQGAPASPSSFTVKRILRL 82
           F   +P+SS    S+   N   P N + +   G P G +MDWQGAP SPSS  VK+ILRL
Sbjct: 79  FRSPSPMSSPNPRSNRSGNGFSPWNGLHQERLGFPQGTSMDWQGAPPSPSSHVVKKILRL 138

Query: 83  EIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEKKLRGRLGYEH 142
           ++PVD+YPNFNFVGR+LGPRGNSLKRVEA+TGCRV+IRGKGSIKDP KE KLRG+ GYEH
Sbjct: 139 DVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDPGKEDKLRGKPGYEH 198

Query: 143 LNEPLHVLIEVDLPANIIDIKLRQAQEII-ELLKPVNTYKGVDRVKKVRLQKL 191
           L++PLH+LIE + PA+IID +LR AQE+I ELLKPV+  +  D  K+ +L++L
Sbjct: 199 LSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVD--ESQDFYKRQQLREL 249

[Close]

BLAST of IVF0007765 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.1e-40
Identity = 163/588 (27.72%), Postives = 266/588 (45.24%), Query Frame = 0


Query: 158 IKLRQAQEIIELLKPVNTYKGV-DRVKKVRLQK-------LRGDYESLHMKESELVSDYT 217
           I+L  + +++  +   +T +G+  R++ + + K       L+    +LHM E      + 
Sbjct: 63  IRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHL 122

Query: 218 SRLLAVVNEMKRFGETISDEQVVEKILRSLNEKFNFIVVAIEESKDLSTMSIDQLMGSLQ 277
           +    ++ ++   G  I +E     +L SL   ++ +   I   K  +T+ +  +  +L 
Sbjct: 123 NVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGK--TTIELKDVTSALL 182

Query: 278 AHEEKLLKKNKQMTEQLFQSKLKLKDKEDSLEKGNRGRGRDGNRGRGDFKDRGQGSYDQR 337
            + EK+ KK +   + L                   GRGR                    
Sbjct: 183 LN-EKMRKKPENQGQALI----------------TEGRGR-------------------- 242

Query: 338 KFDESNSNSNSSRGRGRQHYSRSSGERSNNDRRYDKRQVEYYNFHKFGHYSWEYRN-KVE 397
                 S   SS   GR      SG R  +  R   R    YN ++ GH+  +  N +  
Sbjct: 243 ------SYQRSSNNYGR------SGARGKSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKG 302

Query: 398 ENANYAEKDEES------GDSSLFLACKGAKTC-----ENSAWYLDSGASNHMCGSKSMF 457
           +     +K++++       + ++ L     + C       S W +D+ AS+H    + +F
Sbjct: 303 KGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATPVRDLF 362

Query: 458 ----------VKLDKS----VGGKGKILINLKNGKHEFISNVYYVPYMKNNILSLGQLLE 517
                     VK+  +    + G G I I    G    + +V +VP ++ N++S   L  
Sbjct: 363 CRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDR 422

Query: 518 KGYNILMKDYSLLIRDNHDKIIAKVQMTENRMFLLNIQTDVAQCLKSCLKDPNWI--WHL 577
            GY     +    +      +IAK      R  L     ++ Q   +  +D   +  WH 
Sbjct: 423 DGYESYFANQKWRLTKG-SLVIAK---GVARGTLYRTNAEICQGELNAAQDEISVDLWHK 482

Query: 578 RFGLLNFDGLRLLARKNMVKGLPYVKHPD-QLCEGCLHGKQLRKSFPQESSSRPRRPLEL 637
           R G ++  GL++LA+K+++    Y K    + C+ CL GKQ R SF Q SS R    L+L
Sbjct: 483 RMGHMSEKGLQILAKKSLIS---YAKGTTVKPCDYCLFGKQHRVSF-QTSSERKLNILDL 542

Query: 638 VHTDLCGPIKPSSFGHNNSFLLFIDDFSRKTWVYFVKEKSEVFGMFKRFKALVEKESGYY 697
           V++D+CGP++  S G N  F+ FIDD SRK WVY +K K +VF +F++F ALVE+E+G  
Sbjct: 543 VYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRK 591

Query: 698 IKALRSDREGEFISNEFKTFCVENGIRRPKTVPFTPQQNGVVERKNRT 709
           +K LRSD  GE+ S EF+ +C  +GIR  KTVP TPQ NGV ER NRT
Sbjct: 603 LKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRT 591

[Close]

BLAST of IVF0007765 vs. ExPASy Swiss-Prot
Match: Q0WLR1 (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26480 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 2.0e-39
Identity = 94/205 (45.85%), Postives = 127/205 (61.95%), Query Frame = 0


Query: 13  LLHVSLETKCFHFCNPLSSTYYLSHSKPNPKNFIGKL-----LSGNPGMTMDWQGAPASP 72
           LL  +L    F   +PL+S     +S+ +   +  +      +S +P    +W  +P S 
Sbjct: 96  LLENALSQSRFDHPSPLASGGIFQNSRADMNGWASQFPSERSVSSSP--APNWLNSPGSS 155

Query: 73  SSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKE 132
           S   VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP KE
Sbjct: 156 SGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKE 215

Query: 133 KKLRGRLGYEHLNEPLHVLIEVDLPANIIDIKLRQAQEII-ELLKPVNTYKGVDRVKKVR 192
             +RG+ GYEHLNEPLH+L+E +LP  I+D +L QA+EI+ +LL PV       + +++R
Sbjct: 216 DMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQLR 275

Query: 193 -LQKLRGDYESLHMKESELVSDYTS 211
            L  L G         S  +S Y S
Sbjct: 276 ELALLNGSLREEGSPMSGSISPYNS 298

[Close]

BLAST of IVF0007765 vs. ExPASy TrEMBL
Match: A0A5A7V3X9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003030 PE=4 SV=1)

HSP 1 Score: 986.9 bits (2550), Expect = 4.5e-284
Identity = 515/566 (90.99%), Postives = 525/566 (92.76%), Query Frame = 0


Query: 162 QAQEIIELLKPVNTYKGVDRVKKVRLQKLRGDYESLHMKESELVSDYTSRLLAVVNEMKR 221
           QA +I+E     NTYKGVDRVKKVRLQKLRGDYESLHMKESE VSDYTSRLLAVVNEMKR
Sbjct: 69  QAWQILE-----NTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNEMKR 128

Query: 222 FGETISDEQVVEKILRSLNEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ 281
           FGETISDEQVVEKILRSL+EKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ
Sbjct: 129 FGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ 188

Query: 282 MTEQLFQSKLKLKDKEDSLEKGNRGRGRDGNRGRGDFKDRGQGSYDQRKFDESNSNSNSS 341
           MTEQLFQSKLKLKDKE SLEKGNRGRGR GNRGRGDFKDRGQGSY QRKFDESNSNSNSS
Sbjct: 189 MTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNSNSS 248

Query: 342 RGRGRQHYSRSSGERSNNDRRYDKRQVEYYNFHKFGHYSWEYRNKVEENANYAEKDEESG 401
           RGRGRQHYSRSS ERSNNDRRYDKRQVE YN HKFGHYSWE RN+VEENANYAEKDEESG
Sbjct: 249 RGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDEESG 308

Query: 402 DSSLFLACKGAKTCENSAWYLDSGASNHMCGSKSMFVKLDKSVG--------------GK 461
           DSSLFLACKGA+TCENSAWYLDSGASNHMCGSKSMF++LD+SVG              GK
Sbjct: 309 DSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPVKGK 368

Query: 462 GKILINLKNGKHEFISNVYYVPYMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 521
           GKILINLKNGKHEFISNVYYVP MKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK
Sbjct: 369 GKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 428

Query: 522 VQMTENRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGLLNFDGLRLLARKNMVKGLPYVK 581
           VQMT+NRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFG LNFDGLRLLARKNMVKGLPYVK
Sbjct: 429 VQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK 488

Query: 582 HPDQLCEGCLHGKQLRKSFPQESSSRPRRPLELVHTDLCGPIKPSSFGHNNSFLLFIDDF 641
            PDQLCEGCLHGKQ RKSFPQESS R RRPLELVHTDLCGPIKPSSFG NN FLLFIDDF
Sbjct: 489 LPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDF 548

Query: 642 SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDREGEFISNEFKTFCVENGIR 701
           SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDR GEF SNEFKTFCVENGIR
Sbjct: 549 SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIR 608

Query: 702 RPKTVPFTPQQNGVVERKNRTTLHMA 714
           R  TVPFTPQQNGVVERKNRT L+MA
Sbjct: 609 RTMTVPFTPQQNGVVERKNRTILNMA 629

[Close]

BLAST of IVF0007765 vs. ExPASy TrEMBL
Match: A0A5A7SJX6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G002010 PE=4 SV=1)

HSP 1 Score: 986.9 bits (2550), Expect = 4.5e-284
Identity = 515/566 (90.99%), Postives = 525/566 (92.76%), Query Frame = 0


Query: 162 QAQEIIELLKPVNTYKGVDRVKKVRLQKLRGDYESLHMKESELVSDYTSRLLAVVNEMKR 221
           QA +I+E     NTYKGVDRVKKVRLQKLRGDYESLHMKESE VSDYTSRLLAVVNEMKR
Sbjct: 69  QAWQILE-----NTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNEMKR 128

Query: 222 FGETISDEQVVEKILRSLNEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ 281
           FGETISDEQVVEKILRSL+EKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ
Sbjct: 129 FGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ 188

Query: 282 MTEQLFQSKLKLKDKEDSLEKGNRGRGRDGNRGRGDFKDRGQGSYDQRKFDESNSNSNSS 341
           MTEQLFQSKLKLKDKE SLEKGNRGRGR GNRGRGDFKDRGQGSY QRKFDESNSNSNSS
Sbjct: 189 MTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNSNSS 248

Query: 342 RGRGRQHYSRSSGERSNNDRRYDKRQVEYYNFHKFGHYSWEYRNKVEENANYAEKDEESG 401
           RGRGRQHYSRSS ERSNNDRRYDKRQVE YN HKFGHYSWE RN+VEENANYAEKDEESG
Sbjct: 249 RGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDEESG 308

Query: 402 DSSLFLACKGAKTCENSAWYLDSGASNHMCGSKSMFVKLDKSVG--------------GK 461
           DSSLFLACKGA+TCENSAWYLDSGASNHMCGSKSMF++LD+SVG              GK
Sbjct: 309 DSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPVKGK 368

Query: 462 GKILINLKNGKHEFISNVYYVPYMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 521
           GKILINLKNGKHEFISNVYYVP MKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK
Sbjct: 369 GKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 428

Query: 522 VQMTENRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGLLNFDGLRLLARKNMVKGLPYVK 581
           VQMT+NRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFG LNFDGLRLLARKNMVKGLPYVK
Sbjct: 429 VQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK 488

Query: 582 HPDQLCEGCLHGKQLRKSFPQESSSRPRRPLELVHTDLCGPIKPSSFGHNNSFLLFIDDF 641
            PDQLCEGCLHGKQ RKSFPQESS R RRPLELVHTDLCGPIKPSSFG NN FLLFIDDF
Sbjct: 489 LPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDF 548

Query: 642 SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDREGEFISNEFKTFCVENGIR 701
           SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDR GEF SNEFKTFCVENGIR
Sbjct: 549 SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIR 608

Query: 702 RPKTVPFTPQQNGVVERKNRTTLHMA 714
           R  TVPFTPQQNGVVERKNRT L+MA
Sbjct: 609 RTMTVPFTPQQNGVVERKNRTILNMA 629

[Close]

BLAST of IVF0007765 vs. ExPASy TrEMBL
Match: A0A5A7V308 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00290 PE=4 SV=1)

HSP 1 Score: 986.9 bits (2550), Expect = 4.5e-284
Identity = 515/566 (90.99%), Postives = 525/566 (92.76%), Query Frame = 0


Query: 162 QAQEIIELLKPVNTYKGVDRVKKVRLQKLRGDYESLHMKESELVSDYTSRLLAVVNEMKR 221
           QA +I+E     NTYKGVDRVKKVRLQKLRGDYESLHMKESE VSDYTSRLLAVVNEMKR
Sbjct: 69  QAWQILE-----NTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNEMKR 128

Query: 222 FGETISDEQVVEKILRSLNEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ 281
           FGETISDEQVVEKILRSL+EKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ
Sbjct: 129 FGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ 188

Query: 282 MTEQLFQSKLKLKDKEDSLEKGNRGRGRDGNRGRGDFKDRGQGSYDQRKFDESNSNSNSS 341
           MTEQLFQSKLKLKDKE SLEKGNRGRGR GNRGRGDFKDRGQGSY QRKFDESNSNSNSS
Sbjct: 189 MTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNSNSS 248

Query: 342 RGRGRQHYSRSSGERSNNDRRYDKRQVEYYNFHKFGHYSWEYRNKVEENANYAEKDEESG 401
           RGRGRQHYSRSS ERSNNDRRYDKRQVE YN HKFGHYSWE RN+VEENANYAEKDEESG
Sbjct: 249 RGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDEESG 308

Query: 402 DSSLFLACKGAKTCENSAWYLDSGASNHMCGSKSMFVKLDKSVG--------------GK 461
           DSSLFLACKGA+TCENSAWYLDSGASNHMCGSKSMF++LD+SVG              GK
Sbjct: 309 DSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPVKGK 368

Query: 462 GKILINLKNGKHEFISNVYYVPYMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 521
           GKILINLKNGKHEFISNVYYVP MKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK
Sbjct: 369 GKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 428

Query: 522 VQMTENRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGLLNFDGLRLLARKNMVKGLPYVK 581
           VQMT+NRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFG LNFDGLRLLARKNMVKGLPYVK
Sbjct: 429 VQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK 488

Query: 582 HPDQLCEGCLHGKQLRKSFPQESSSRPRRPLELVHTDLCGPIKPSSFGHNNSFLLFIDDF 641
            PDQLCEGCLHGKQ RKSFPQESS R RRPLELVHTDLCGPIKPSSFG NN FLLFIDDF
Sbjct: 489 LPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDF 548

Query: 642 SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDREGEFISNEFKTFCVENGIR 701
           SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDR GEF SNEFKTFCVENGIR
Sbjct: 549 SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIR 608

Query: 702 RPKTVPFTPQQNGVVERKNRTTLHMA 714
           R  TVPFTPQQNGVVERKNRT L+MA
Sbjct: 609 RTMTVPFTPQQNGVVERKNRTILNMA 629

[Close]

BLAST of IVF0007765 vs. ExPASy TrEMBL
Match: A0A5D3D497 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00810 PE=4 SV=1)

HSP 1 Score: 986.9 bits (2550), Expect = 4.5e-284
Identity = 515/566 (90.99%), Postives = 525/566 (92.76%), Query Frame = 0


Query: 162 QAQEIIELLKPVNTYKGVDRVKKVRLQKLRGDYESLHMKESELVSDYTSRLLAVVNEMKR 221
           QA +I+E     NTYKGVDRVKKVRLQKLRGDYESLHMKESE VSDYTSRLLAVVNEMKR
Sbjct: 69  QAWQILE-----NTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNEMKR 128

Query: 222 FGETISDEQVVEKILRSLNEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ 281
           FGETISDEQVVEKILRSL+EKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ
Sbjct: 129 FGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ 188

Query: 282 MTEQLFQSKLKLKDKEDSLEKGNRGRGRDGNRGRGDFKDRGQGSYDQRKFDESNSNSNSS 341
           MTEQLFQSKLKLKDKE SLEKGNRGRGR GNRGRGDFKDRGQGSY QRKFDESNSNSNSS
Sbjct: 189 MTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNSNSS 248

Query: 342 RGRGRQHYSRSSGERSNNDRRYDKRQVEYYNFHKFGHYSWEYRNKVEENANYAEKDEESG 401
           RGRGRQHYSRSS ERSNNDRRYDKRQVE YN HKFGHYSWE RN+VEENANYAEKDEESG
Sbjct: 249 RGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDEESG 308

Query: 402 DSSLFLACKGAKTCENSAWYLDSGASNHMCGSKSMFVKLDKSVG--------------GK 461
           DSSLFLACKGA+TCENSAWYLDSGASNHMCGSKSMF++LD+SVG              GK
Sbjct: 309 DSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPVKGK 368

Query: 462 GKILINLKNGKHEFISNVYYVPYMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 521
           GKILINLKNGKHEFISNVYYVP MKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK
Sbjct: 369 GKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 428

Query: 522 VQMTENRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGLLNFDGLRLLARKNMVKGLPYVK 581
           VQMT+NRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFG LNFDGLRLLARKNMVKGLPYVK
Sbjct: 429 VQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK 488

Query: 582 HPDQLCEGCLHGKQLRKSFPQESSSRPRRPLELVHTDLCGPIKPSSFGHNNSFLLFIDDF 641
            PDQLCEGCLHGKQ RKSFPQESS R RRPLELVHTDLCGPIKPSSFG NN FLLFIDDF
Sbjct: 489 LPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDF 548

Query: 642 SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDREGEFISNEFKTFCVENGIR 701
           SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDR GEF SNEFKTFCVENGIR
Sbjct: 549 SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIR 608

Query: 702 RPKTVPFTPQQNGVVERKNRTTLHMA 714
           R  TVPFTPQQNGVVERKNRT L+MA
Sbjct: 609 RTMTVPFTPQQNGVVERKNRTILNMA 629

[Close]

BLAST of IVF0007765 vs. ExPASy TrEMBL
Match: A0A5A7U3F3 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00420 PE=4 SV=1)

HSP 1 Score: 986.9 bits (2550), Expect = 4.5e-284
Identity = 515/566 (90.99%), Postives = 525/566 (92.76%), Query Frame = 0


Query: 162 QAQEIIELLKPVNTYKGVDRVKKVRLQKLRGDYESLHMKESELVSDYTSRLLAVVNEMKR 221
           QA +I+E     NTYKGVDRVKKVRLQKLRGDYESLHMKESE VSDYTSRLLAVVNEMKR
Sbjct: 69  QAWQILE-----NTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNEMKR 128

Query: 222 FGETISDEQVVEKILRSLNEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ 281
           FGETISDEQVVEKILRSL+EKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ
Sbjct: 129 FGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ 188

Query: 282 MTEQLFQSKLKLKDKEDSLEKGNRGRGRDGNRGRGDFKDRGQGSYDQRKFDESNSNSNSS 341
           MTEQLFQSKLKLKDKE SLEKGNRGRGR GNRGRGDFKDRGQGSY QRKFDESNSNSNSS
Sbjct: 189 MTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNSNSS 248

Query: 342 RGRGRQHYSRSSGERSNNDRRYDKRQVEYYNFHKFGHYSWEYRNKVEENANYAEKDEESG 401
           RGRGRQHYSRSS ERSNNDRRYDKRQVE YN HKFGHYSWE RN+VEENANYAEKDEESG
Sbjct: 249 RGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDEESG 308

Query: 402 DSSLFLACKGAKTCENSAWYLDSGASNHMCGSKSMFVKLDKSVG--------------GK 461
           DSSLFLACKGA+TCENSAWYLDSGASNHMCGSKSMF++LD+SVG              GK
Sbjct: 309 DSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPVKGK 368

Query: 462 GKILINLKNGKHEFISNVYYVPYMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 521
           GKILINLKNGKHEFISNVYYVP MKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK
Sbjct: 369 GKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 428

Query: 522 VQMTENRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGLLNFDGLRLLARKNMVKGLPYVK 581
           VQMT+NRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFG LNFDGLRLLARKNMVKGLPYVK
Sbjct: 429 VQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK 488

Query: 582 HPDQLCEGCLHGKQLRKSFPQESSSRPRRPLELVHTDLCGPIKPSSFGHNNSFLLFIDDF 641
            PDQLCEGCLHGKQ RKSFPQESS R RRPLELVHTDLCGPIKPSSFG NN FLLFIDDF
Sbjct: 489 LPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDF 548

Query: 642 SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDREGEFISNEFKTFCVENGIR 701
           SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDR GEF SNEFKTFCVENGIR
Sbjct: 549 SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIR 608

Query: 702 RPKTVPFTPQQNGVVERKNRTTLHMA 714
           R  TVPFTPQQNGVVERKNRT L+MA
Sbjct: 609 RTMTVPFTPQQNGVVERKNRTILNMA 629

[Close]

BLAST of IVF0007765 vs. NCBI nr
Match: TYK18362.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 986 bits (2548), Expect = 0.0
Identity = 515/566 (90.99%), Postives = 525/566 (92.76%), Query Frame = 0


Query: 162 QAQEIIELLKPVNTYKGVDRVKKVRLQKLRGDYESLHMKESELVSDYTSRLLAVVNEMKR 221
           QA +I+E     NTYKGVDRVKKVRLQKLRGDYESLHMKESE VSDYTSRLLAVVNEMKR
Sbjct: 69  QAWQILE-----NTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNEMKR 128

Query: 222 FGETISDEQVVEKILRSLNEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ 281
           FGETISDEQVVEKILRSL+EKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ
Sbjct: 129 FGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ 188

Query: 282 MTEQLFQSKLKLKDKEDSLEKGNRGRGRDGNRGRGDFKDRGQGSYDQRKFDESNSNSNSS 341
           MTEQLFQSKLKLKDKE SLEKGNRGRGR GNRGRGDFKDRGQGSY QRKFDESNSNSNSS
Sbjct: 189 MTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNSNSS 248

Query: 342 RGRGRQHYSRSSGERSNNDRRYDKRQVEYYNFHKFGHYSWEYRNKVEENANYAEKDEESG 401
           RGRGRQHYSRSS ERSNNDRRYDKRQVE YN HKFGHYSWE RN+VEENANYAEKDEESG
Sbjct: 249 RGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDEESG 308

Query: 402 DSSLFLACKGAKTCENSAWYLDSGASNHMCGSKSMFVKLDKSVGG--------------K 461
           DSSLFLACKGA+TCENSAWYLDSGASNHMCGSKSMF++LD+SVGG              K
Sbjct: 309 DSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPVKGK 368

Query: 462 GKILINLKNGKHEFISNVYYVPYMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 521
           GKILINLKNGKHEFISNVYYVP MKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK
Sbjct: 369 GKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 428

Query: 522 VQMTENRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGLLNFDGLRLLARKNMVKGLPYVK 581
           VQMT+NRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFG LNFDGLRLLARKNMVKGLPYVK
Sbjct: 429 VQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK 488

Query: 582 HPDQLCEGCLHGKQLRKSFPQESSSRPRRPLELVHTDLCGPIKPSSFGHNNSFLLFIDDF 641
            PDQLCEGCLHGKQ RKSFPQESS R RRPLELVHTDLCGPIKPSSFG NN FLLFIDDF
Sbjct: 489 LPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDF 548

Query: 642 SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDREGEFISNEFKTFCVENGIR 701
           SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDR GEF SNEFKTFCVENGIR
Sbjct: 549 SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIR 608

Query: 702 RPKTVPFTPQQNGVVERKNRTTLHMA 713
           R  TVPFTPQQNGVVERKNRT L+MA
Sbjct: 609 RTMTVPFTPQQNGVVERKNRTILNMA 629

[Close]

BLAST of IVF0007765 vs. NCBI nr
Match: KAA0047979.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 986 bits (2548), Expect = 0.0
Identity = 515/566 (90.99%), Postives = 525/566 (92.76%), Query Frame = 0


Query: 162 QAQEIIELLKPVNTYKGVDRVKKVRLQKLRGDYESLHMKESELVSDYTSRLLAVVNEMKR 221
           QA +I+E     NTYKGVDRVKKVRLQKLRGDYESLHMKESE VSDYTSRLLAVVNEMKR
Sbjct: 69  QAWQILE-----NTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNEMKR 128

Query: 222 FGETISDEQVVEKILRSLNEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ 281
           FGETISDEQVVEKILRSL+EKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ
Sbjct: 129 FGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ 188

Query: 282 MTEQLFQSKLKLKDKEDSLEKGNRGRGRDGNRGRGDFKDRGQGSYDQRKFDESNSNSNSS 341
           MTEQLFQSKLKLKDKE SLEKGNRGRGR GNRGRGDFKDRGQGSY QRKFDESNSNSNSS
Sbjct: 189 MTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNSNSS 248

Query: 342 RGRGRQHYSRSSGERSNNDRRYDKRQVEYYNFHKFGHYSWEYRNKVEENANYAEKDEESG 401
           RGRGRQHYSRSS ERSNNDRRYDKRQVE YN HKFGHYSWE RN+VEENANYAEKDEESG
Sbjct: 249 RGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDEESG 308

Query: 402 DSSLFLACKGAKTCENSAWYLDSGASNHMCGSKSMFVKLDKSVGG--------------K 461
           DSSLFLACKGA+TCENSAWYLDSGASNHMCGSKSMF++LD+SVGG              K
Sbjct: 309 DSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPVKGK 368

Query: 462 GKILINLKNGKHEFISNVYYVPYMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 521
           GKILINLKNGKHEFISNVYYVP MKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK
Sbjct: 369 GKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 428

Query: 522 VQMTENRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGLLNFDGLRLLARKNMVKGLPYVK 581
           VQMT+NRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFG LNFDGLRLLARKNMVKGLPYVK
Sbjct: 429 VQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK 488

Query: 582 HPDQLCEGCLHGKQLRKSFPQESSSRPRRPLELVHTDLCGPIKPSSFGHNNSFLLFIDDF 641
            PDQLCEGCLHGKQ RKSFPQESS R RRPLELVHTDLCGPIKPSSFG NN FLLFIDDF
Sbjct: 489 LPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDF 548

Query: 642 SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDREGEFISNEFKTFCVENGIR 701
           SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDR GEF SNEFKTFCVENGIR
Sbjct: 549 SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIR 608

Query: 702 RPKTVPFTPQQNGVVERKNRTTLHMA 713
           R  TVPFTPQQNGVVERKNRT L+MA
Sbjct: 609 RTMTVPFTPQQNGVVERKNRTILNMA 629

[Close]

BLAST of IVF0007765 vs. NCBI nr
Match: TYJ96309.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 986 bits (2548), Expect = 0.0
Identity = 515/566 (90.99%), Postives = 525/566 (92.76%), Query Frame = 0


Query: 162 QAQEIIELLKPVNTYKGVDRVKKVRLQKLRGDYESLHMKESELVSDYTSRLLAVVNEMKR 221
           QA +I+E     NTYKGVDRVKKVRLQKLRGDYESLHMKESE VSDYTSRLLAVVNEMKR
Sbjct: 69  QAWQILE-----NTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNEMKR 128

Query: 222 FGETISDEQVVEKILRSLNEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ 281
           FGETISDEQVVEKILRSL+EKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ
Sbjct: 129 FGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ 188

Query: 282 MTEQLFQSKLKLKDKEDSLEKGNRGRGRDGNRGRGDFKDRGQGSYDQRKFDESNSNSNSS 341
           MTEQLFQSKLKLKDKE SLEKGNRGRGR GNRGRGDFKDRGQGSY QRKFDESNSNSNSS
Sbjct: 189 MTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNSNSS 248

Query: 342 RGRGRQHYSRSSGERSNNDRRYDKRQVEYYNFHKFGHYSWEYRNKVEENANYAEKDEESG 401
           RGRGRQHYSRSS ERSNNDRRYDKRQVE YN HKFGHYSWE RN+VEENANYAEKDEESG
Sbjct: 249 RGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDEESG 308

Query: 402 DSSLFLACKGAKTCENSAWYLDSGASNHMCGSKSMFVKLDKSVGG--------------K 461
           DSSLFLACKGA+TCENSAWYLDSGASNHMCGSKSMF++LD+SVGG              K
Sbjct: 309 DSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPVKGK 368

Query: 462 GKILINLKNGKHEFISNVYYVPYMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 521
           GKILINLKNGKHEFISNVYYVP MKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK
Sbjct: 369 GKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 428

Query: 522 VQMTENRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGLLNFDGLRLLARKNMVKGLPYVK 581
           VQMT+NRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFG LNFDGLRLLARKNMVKGLPYVK
Sbjct: 429 VQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK 488

Query: 582 HPDQLCEGCLHGKQLRKSFPQESSSRPRRPLELVHTDLCGPIKPSSFGHNNSFLLFIDDF 641
            PDQLCEGCLHGKQ RKSFPQESS R RRPLELVHTDLCGPIKPSSFG NN FLLFIDDF
Sbjct: 489 LPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDF 548

Query: 642 SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDREGEFISNEFKTFCVENGIR 701
           SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDR GEF SNEFKTFCVENGIR
Sbjct: 549 SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIR 608

Query: 702 RPKTVPFTPQQNGVVERKNRTTLHMA 713
           R  TVPFTPQQNGVVERKNRT L+MA
Sbjct: 609 RTMTVPFTPQQNGVVERKNRTILNMA 629

[Close]

BLAST of IVF0007765 vs. NCBI nr
Match: TYK06895.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 986 bits (2548), Expect = 0.0
Identity = 515/566 (90.99%), Postives = 525/566 (92.76%), Query Frame = 0


Query: 162 QAQEIIELLKPVNTYKGVDRVKKVRLQKLRGDYESLHMKESELVSDYTSRLLAVVNEMKR 221
           QA +I+E     NTYKGVDRVKKVRLQKLRGDYESLHMKESE VSDYTSRLLAVVNEMKR
Sbjct: 69  QAWQILE-----NTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNEMKR 128

Query: 222 FGETISDEQVVEKILRSLNEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ 281
           FGETISDEQVVEKILRSL+EKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ
Sbjct: 129 FGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ 188

Query: 282 MTEQLFQSKLKLKDKEDSLEKGNRGRGRDGNRGRGDFKDRGQGSYDQRKFDESNSNSNSS 341
           MTEQLFQSKLKLKDKE SLEKGNRGRGR GNRGRGDFKDRGQGSY QRKFDESNSNSNSS
Sbjct: 189 MTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNSNSS 248

Query: 342 RGRGRQHYSRSSGERSNNDRRYDKRQVEYYNFHKFGHYSWEYRNKVEENANYAEKDEESG 401
           RGRGRQHYSRSS ERSNNDRRYDKRQVE YN HKFGHYSWE RN+VEENANYAEKDEESG
Sbjct: 249 RGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDEESG 308

Query: 402 DSSLFLACKGAKTCENSAWYLDSGASNHMCGSKSMFVKLDKSVGG--------------K 461
           DSSLFLACKGA+TCENSAWYLDSGASNHMCGSKSMF++LD+SVGG              K
Sbjct: 309 DSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPVKGK 368

Query: 462 GKILINLKNGKHEFISNVYYVPYMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 521
           GKILINLKNGKHEFISNVYYVP MKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK
Sbjct: 369 GKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 428

Query: 522 VQMTENRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGLLNFDGLRLLARKNMVKGLPYVK 581
           VQMT+NRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFG LNFDGLRLLARKNMVKGLPYVK
Sbjct: 429 VQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK 488

Query: 582 HPDQLCEGCLHGKQLRKSFPQESSSRPRRPLELVHTDLCGPIKPSSFGHNNSFLLFIDDF 641
            PDQLCEGCLHGKQ RKSFPQESS R RRPLELVHTDLCGPIKPSSFG NN FLLFIDDF
Sbjct: 489 LPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDF 548

Query: 642 SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDREGEFISNEFKTFCVENGIR 701
           SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDR GEF SNEFKTFCVENGIR
Sbjct: 549 SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIR 608

Query: 702 RPKTVPFTPQQNGVVERKNRTTLHMA 713
           R  TVPFTPQQNGVVERKNRT L+MA
Sbjct: 609 RTMTVPFTPQQNGVVERKNRTILNMA 629

[Close]

BLAST of IVF0007765 vs. NCBI nr
Match: TYK08113.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 986 bits (2548), Expect = 0.0
Identity = 515/566 (90.99%), Postives = 525/566 (92.76%), Query Frame = 0


Query: 162 QAQEIIELLKPVNTYKGVDRVKKVRLQKLRGDYESLHMKESELVSDYTSRLLAVVNEMKR 221
           QA +I+E     NTYKGVDRVKKVRLQKLRGDYESLHMKESE VSDYTSRLLAVVNEMKR
Sbjct: 69  QAWQILE-----NTYKGVDRVKKVRLQKLRGDYESLHMKESESVSDYTSRLLAVVNEMKR 128

Query: 222 FGETISDEQVVEKILRSLNEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ 281
           FGETISDEQVVEKILRSL+EKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ
Sbjct: 129 FGETISDEQVVEKILRSLDEKFNFIVVAIEESKDLSTMSIDQLMGSLQAHEEKLLKKNKQ 188

Query: 282 MTEQLFQSKLKLKDKEDSLEKGNRGRGRDGNRGRGDFKDRGQGSYDQRKFDESNSNSNSS 341
           MTEQLFQSKLKLKDKE SLEKGNRGRGR GNRGRGDFKDRGQGSY QRKFDESNSNSNSS
Sbjct: 189 MTEQLFQSKLKLKDKEGSLEKGNRGRGRGGNRGRGDFKDRGQGSYGQRKFDESNSNSNSS 248

Query: 342 RGRGRQHYSRSSGERSNNDRRYDKRQVEYYNFHKFGHYSWEYRNKVEENANYAEKDEESG 401
           RGRGRQHYSRSS ERSNNDRRYDKRQVE YN HKFGHYSWE RN+VEENANYAEKDEESG
Sbjct: 249 RGRGRQHYSRSSWERSNNDRRYDKRQVECYNCHKFGHYSWECRNRVEENANYAEKDEESG 308

Query: 402 DSSLFLACKGAKTCENSAWYLDSGASNHMCGSKSMFVKLDKSVGG--------------K 461
           DSSLFLACKGA+TCENSAWYLDSGASNHMCGSKSMF++LD+SVGG              K
Sbjct: 309 DSSLFLACKGAETCENSAWYLDSGASNHMCGSKSMFIELDESVGGDIVFGDATKIPVKGK 368

Query: 462 GKILINLKNGKHEFISNVYYVPYMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 521
           GKILINLKNGKHEFISNVYYVP MKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK
Sbjct: 369 GKILINLKNGKHEFISNVYYVPNMKNNILSLGQLLEKGYNILMKDYSLLIRDNHDKIIAK 428

Query: 522 VQMTENRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGLLNFDGLRLLARKNMVKGLPYVK 581
           VQMT+NRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFG LNFDGLRLLARKNMVKGLPYVK
Sbjct: 429 VQMTKNRMFLLNIQTDVAQCLKSCLKDPNWIWHLRFGHLNFDGLRLLARKNMVKGLPYVK 488

Query: 582 HPDQLCEGCLHGKQLRKSFPQESSSRPRRPLELVHTDLCGPIKPSSFGHNNSFLLFIDDF 641
            PDQLCEGCLHGKQ RKSFPQESS R RRPLELVHTDLCGPIKPSSFG NN FLLFIDDF
Sbjct: 489 LPDQLCEGCLHGKQSRKSFPQESSWRARRPLELVHTDLCGPIKPSSFGKNNYFLLFIDDF 548

Query: 642 SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDREGEFISNEFKTFCVENGIR 701
           SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDR GEF SNEFKTFCVENGIR
Sbjct: 549 SRKTWVYFVKEKSEVFGMFKRFKALVEKESGYYIKALRSDRGGEFTSNEFKTFCVENGIR 608

Query: 702 RPKTVPFTPQQNGVVERKNRTTLHMA 713
           R  TVPFTPQQNGVVERKNRT L+MA
Sbjct: 609 RTMTVPFTPQQNGVVERKNRTILNMA 629

[Close]

BLAST of IVF0007765 vs. TAIR 10
Match: AT2G38610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 228.0 bits (580), Expect = 2.4e-59
Identity = 114/142 (80.28%), Postives = 128/142 (90.14%), Query Frame = 0


Query: 50  LSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATT 109
           LSG PGMTMDWQGAP SPSS+TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVEATT
Sbjct: 112 LSGTPGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATT 171

Query: 110 GCRVYIRGKGSIKDPEKEKKLRGRLGYEHLNEPLHVLIEVDLPANIIDIKLRQAQEII-E 169
           GCRV+IRGKGSIKDPEKE KLRGR GYEHLNE LH+LIE DLPA+I++I+LRQAQEII E
Sbjct: 172 GCRVFIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEE 231

Query: 170 LLKPVNTYKGVDRVKKVRLQKL 191
           LLKPV+  +  D +K+ +L++L
Sbjct: 232 LLKPVD--ESQDFIKRQQLREL 251

[Close]

BLAST of IVF0007765 vs. TAIR 10
Match: AT2G38610.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 228.0 bits (580), Expect = 2.4e-59
Identity = 114/142 (80.28%), Postives = 128/142 (90.14%), Query Frame = 0


Query: 50  LSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATT 109
           LSG PGMTMDWQGAP SPSS+TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVEATT
Sbjct: 112 LSGTPGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATT 171

Query: 110 GCRVYIRGKGSIKDPEKEKKLRGRLGYEHLNEPLHVLIEVDLPANIIDIKLRQAQEII-E 169
           GCRV+IRGKGSIKDPEKE KLRGR GYEHLNE LH+LIE DLPA+I++I+LRQAQEII E
Sbjct: 172 GCRVFIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEE 231

Query: 170 LLKPVNTYKGVDRVKKVRLQKL 191
           LLKPV+  +  D +K+ +L++L
Sbjct: 232 LLKPVD--ESQDFIKRQQLREL 251

[Close]

BLAST of IVF0007765 vs. TAIR 10
Match: AT3G08620.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 217.2 bits (552), Expect = 4.2e-56
Identity = 107/142 (75.35%), Postives = 126/142 (88.73%), Query Frame = 0


Query: 50  LSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATT 109
           + G  GM M+WQGAPASPSS+ VKRILRL++PVDTYPNFNFVGRLLGPRGNSLKRVEATT
Sbjct: 111 IGGPHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATT 170

Query: 110 GCRVYIRGKGSIKDPEKEKKLRGRLGYEHLNEPLHVLIEVDLPANIIDIKLRQAQEII-E 169
           GCRVYIRGKGSIKDPEKE+KL+G+ GYEHLNE LH+LIE DLP +I+DIKLRQAQEII E
Sbjct: 171 GCRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEE 230

Query: 170 LLKPVNTYKGVDRVKKVRLQKL 191
           L+KPV+  +  D +K+ +L++L
Sbjct: 231 LVKPVD--ESQDYIKRQQLREL 250

[Close]

BLAST of IVF0007765 vs. TAIR 10
Match: AT4G26480.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 165.6 bits (418), Expect = 1.4e-40
Identity = 94/205 (45.85%), Postives = 127/205 (61.95%), Query Frame = 0


Query: 13  LLHVSLETKCFHFCNPLSSTYYLSHSKPNPKNFIGKL-----LSGNPGMTMDWQGAPASP 72
           LL  +L    F   +PL+S     +S+ +   +  +      +S +P    +W  +P S 
Sbjct: 96  LLENALSQSRFDHPSPLASGGIFQNSRADMNGWASQFPSERSVSSSP--APNWLNSPGSS 155

Query: 73  SSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKE 132
           S   VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP KE
Sbjct: 156 SGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKE 215

Query: 133 KKLRGRLGYEHLNEPLHVLIEVDLPANIIDIKLRQAQEII-ELLKPVNTYKGVDRVKKVR 192
             +RG+ GYEHLNEPLH+L+E +LP  I+D +L QA+EI+ +LL PV       + +++R
Sbjct: 216 DMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQLR 275

Query: 193 -LQKLRGDYESLHMKESELVSDYTS 211
            L  L G         S  +S Y S
Sbjct: 276 ELALLNGSLREEGSPMSGSISPYNS 298

[Close]

BLAST of IVF0007765 vs. TAIR 10
Match: AT5G56140.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 164.5 bits (415), Expect = 3.2e-40
Identity = 84/154 (54.55%), Postives = 108/154 (70.13%), Query Frame = 0


Query: 59  DWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGK 118
           +W  +P S S    KR +R++IPVD YPNFNFVGRLLGPRGNSLKRVEA+T CRV IRG+
Sbjct: 151 NWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGR 210

Query: 119 GSIKDPEKEKKLRGRLGYEHLNEPLHVLIEVDLPANIIDIKLRQAQEII-ELLKPVNTYK 178
           GSIKDP KE+ +RG+ GYEHLNEPLH+L+E +LP  I+D +L QA+EI+ +LL P+    
Sbjct: 211 GSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETH 270

Query: 179 GVDRVKKVR-LQKLRGDYESLHMKESELVSDYTS 211
            + + +++R L  L G         S  VS Y S
Sbjct: 271 DMYKKQQLRELALLNGTLREEGSPMSGSVSPYNS 304

The following BLAST results are available for this feature:

BLAST of IVF0007765 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVI3	3.3e-58	80.28	KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38...	[more]
Q8GYR4	5.8e-55	75.35	KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08...	[more]
Q75GR5	3.7e-49	61.27	KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
P10978	1.1e-40	27.72	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q0WLR1	2.0e-39	45.85	KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26...	[more]

BLAST of IVF0007765 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V3X9	4.5e-284	90.99	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7SJX6	4.5e-284	90.99	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7V308	4.5e-284	90.99	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3D497	4.5e-284	90.99	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7U3F3	4.5e-284	90.99	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of IVF0007765 vs. NCBI nr


Match Name	Identity	Description
TYK18362.1	90.99	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0047979.1	90.99	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYJ96309.1	90.99	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK06895.1	90.99	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK08113.1	90.99	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of IVF0007765 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38610.1	2.4e-59	80.28	RNA-binding KH domain-containing protein	[more]
AT2G38610.2	2.4e-59	80.28	RNA-binding KH domain-containing protein	[more]
AT3G08620.1	4.2e-56	75.35	RNA-binding KH domain-containing protein	[more]
AT4G26480.1	1.4e-40	45.85	RNA-binding KH domain-containing protein	[more]
AT5G56140.1	3.2e-40	54.55	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 261..281
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 162..275 e-value: 2.4E-15 score: 56.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 294..363
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 294..328
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 329..347
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 348..363
None	No IPR available	PANTHER	PTHR11208:SF114	STAR PROTEIN, HOMODIMERIZATION REGION-RELATED	coord: 54..190
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 89..146 score: 8.51273
None	No IPR available	CDD	cd02395	SF1_like-KH	coord: 77..173 e-value: 1.83157E-37 score: 133.908
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 72..168 e-value: 1.2E-5 score: 34.7
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 588..713 e-value: 1.0E-29 score: 105.3
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 89..122 e-value: 9.4E-5 score: 22.2
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 595..688 e-value: 1.2E-9 score: 38.4
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 593..713 score: 20.315054
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 35..202 e-value: 2.8E-43 score: 150.3
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 79..170
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 526..581 e-value: 6.7E-10 score: 38.7
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 54..190
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 593..712

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0007765.2	IVF0007765.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding