IVF0007678 (gene) Melon (IVF77) v1

Overview


Name	IVF0007678
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	TLC domain-containing protein 2
Location	chr03: 8112105 .. 8115750 (+)
RNA-Seq Expression	IVF0007678
Synteny	IVF0007678

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTTCACAGAATCGTCGTCTCTCTCCAGCAGATACAGAACACACGATTTAGCTCCACACCGACTCCATGGCGGGGAGAACACTGTTGAAGGAGAAGAGCAGGGCAGGAAGCTTCTTCTCCGCCACATTACTGCTTTGGTCAGTTTCTCTTTGGTTCGAAATTCTATTCGACCGACGCTTCCGGCTGCTCTACGTTGTTTTCGGAGCTCTGTTCTACCAGTCCGCCAATTCCTCCATTAGAGTTCTTGTTTCTAAGGATCCTCTATTAGTCAACACCTCCGTTTCTCTCCTTCACTCCATTGTCACCTCTGCTTCAGGTTCTATGCTTCTCTTTTACTATCTCGTTGTTTATTTTTCTCTTTTTCTTCTTCTTCTTTTAATTCTATTTATAACTCCGCTTGTTGTTTTAATTTTCATTATATATGACTGCCTTCCTTGCTCACTGTTTTGATTCTTTGTTTGGAAGTTACTTCTTCGCCTTGCTTAGGTTGAAGGTTTTACTGATTGAAATAATAGATTTTCTTTGCACTATAAAAAAGACTCAGGGTAGGTCTTGTTTCGTTTTTGCAAGTTATGTGTTGTAAATTCTGTGAATTATTAGTTATTGATGTGGTTTAGTGCGCATGCTGCAGTTGGTTGTTTGAGCCAATGAACCGAGCACAAGTGAATTATTTTGGACTGCTTTTCCTGTGCCAAGAATATCAAGACTCTGTCTTTCACTCCTTTTGTATTTACTACCTTTGTCAAATTATAGAATTGATCCCCAATTTTGAAGCTTTAGTTCTTGCCTTTTTAACAATTTTAGTTGCATATCTGAATTTTAGATTATGGTTCTATTTATTCCATTAGAATGTAGGGGCATATGTAGCAGTCACTCTTGAATTTATTTTGAATGACTTAAGGTTATTTTGTGATATGATTTTAAAATAGCTCTCAAACATGTCTGGGTTTGCTACCTCATATGAATTCAGTTAAAATTCACTCAATGAACTAAAACTAAGCTAAATACAGTTTAAAATATAGAGATAGGAACTGATTTTTTTTTTCTTTTTTTCTTTTTTTCTTTGAAGCTTTAAGATTAAATAAATGCCATGCTTTCTTCCTCTCTACTTTCTTATGTCTCGAACCCCTTTTTCCCCAGAGATTCTGTTTTCGTCAAGTTTAAAGAAATGTGGAAAAATAGACTGCCTTAATTGATAGGCAAGAAAAGAAAGGTTGCAAGTCGATAAACAGATGAAGTGTTGAGATAAAGGATGTTTTAGGAAAAGAAAGCTTCAGTTGTTTCCCATGTTAGTCTAGGAAAAGAAATCTTAGTAACATAGACAAGGGTCGTCCATATGACCTGTATGAAGATCTCTAACCCCACTATGTCGCTAAGATCAAACAAGTCAGTTGCATTTTACCATACTACGTAAACATTTCTTCCAAATCAAGGTAGGAAATTTTCAAGCCTCCCCTGTTTTTCATTCCCTATCAAGTTTGCTTGCCTTCTCTTCCTTATTTCTTTACCAATCTCTGCATTCTATGCATTTCGATGCATAAATGAAGGAAAAAAGGTGATACTATTTGGTTGATGGAGAGAACAGAAACATGGAAGATTTTGTATTCTAAAGATGCTTTGCTAAAATATTCCGAACTATTATGCGAGGAAAGGTTGTCTGTCGACCCAGAAAATGTCTCAAACTCGTTAACGATGTTAGAGATTTTCTCTTGGCCCCATTAGCAACTTCTTTGTATTGTTGAAGGTTGAGGAAATGAGGTTCAAAGCTTAAAGGTAAACTAACTATTTAATCGTAAGGTTTGAATAGATGTATTATCAATTCCTATTGTTCAAGATAGAGGAAGGCTACTTGATTGGCCTTGGTTATCACATGATTTTAACCTGAAGTGCTTTGTTGGCTCACCAATTTCTGAGTGTCAATAGTTTATCCTATTGTTTGGGCCATCTAGTTAAGTCATCTTTGCAATGATTTAATTGCAGTACTGTTTGTTTTGGTGAACCGGTGGCTGAGTTATGATTCCAGTTCAGAGGGGATGTTTGAGCATTCACAATTGTTTGGAGGAACATGGCCATGGGCTTATGCAGCTTTGTGCTTCTCATGTGGATATTTTGCATACGATCAGTGGGATATGCTGCGATACGGACTATATAGTGGTTGGATTCCTGCGATCCTGGTTCATCATCTGGTTCTTCTCATTTGCTTTACACTTGCTTTGTATAGGAATGTCACCATCAATTATCTCATTCTCACTCTCGTTTGCGAGGTATGCTTTAGTTTATTCTTGCAAAATGTGCCTTGTGAATATGCTGCTTTCTTTCTTCATGTTTGTGGTTCTTTCTGGATTTAAGCATTTCTTTTACTATGACAGTCTCCTTTGATGACTTCGACACAGGCACAAATATGATGTCTCCAACTATTTAACGATGGTTTCAGATTTAAGTTGTTTTACAAAGGAACGTAATAGATTGGTACTTTATCTAGTGCTTTAGGCTTGAACAGTCCATCTTAATCTCTTGTGGCACCCAGTTTCCTTTTCTGATCACTTTCTCAATGCACTTTCTCTCACTAAGTTCTCTTCGGATTCACCCTTTCACATTGATCTACTCCCTTAGACCATTGCTATTGCTTTACTCTTAGTTACTCATTCCCTTACCTTATTTAACCCTAAATTTTCAATATTTCATCTGGTACATTTGTGTATTTCAAACAATATCTTTGAAATTTCATGAACTAATTACACAAACCTCGAGAATCATTGACTAAACTTATAATTTAACCCTAGTCTATTTCGACACACTCTCTCTTACTATGTCTCTCAGACGCACACCATCTCTCACTTGTTTTTTCTTTTTTATTTTTTGATCTTGTGATGTGCACACATACGGAACATGCCTTTCAGGTGGGAAATTAAACACCTTAGTTAGCAAATGATAGAGAGTGAACTTGTACTTTCTATGCTCATATTGAAGGACCTTGTTAAATCATCGATTGACTCATGTATTAGCTTAAGCTTTTTGATCGATCAATGATTTGATATGGTGTAGAAGGTCATATGTTCAAACCCTTTCAATGTTATTTCCTTACCAGATTTATTCTTAGAACAACCATACTCTATTAGAATCAAACCAAGTTTTTGGGTCATTTTTTACTTCCACCTTTTAATATGCAAAATTAAGACAAGAATTGTTCTGATGTTCCAGATGCATTCTATCTTCCTCCATGTAAGGCGATTGCGAAGGATGGCTGGTGTTCGTGATGCCAAGAGCATTATCGTGAAAGTTGAATGGATTCTCAACTGGCTAACATTTGTTTTCGCAAGGTTTGTTCCACACATTCTCATTACTGTCAAGCTCATCATAGATGCTTACAAGTTCGATAAAGGCGTAGAGCTGCCACTTGCATTGTCTGGGATGACTGGCATGAACCTGCTGAATGCTTTGCTTGGTATTGATCTTTTAAACGCTGTAAGGAAAGAGAGTAATTACAAGAAAACTGATGACACTCATCATGAATGAAGGAGGACTAACTTTGGTGGAATTGTATTTTGTTCTGTTTATTATATATTTTGTAGAGAGAATGAATAGAAGACTATTCAAGAGAAAATCATTTTAAAGACGGAAGAGAAATTTGTATAATATCAGTCT

mRNA sequence

CTCTTCACAGAATCGTCGTCTCTCTCCAGCAGATACAGAACACACGATTTAGCTCCACACCGACTCCATGGCGGGGAGAACACTGTTGAAGGAGAAGAGCAGGGCAGGAAGCTTCTTCTCCGCCACATTACTGCTTTGGTCAGTTTCTCTTTGGTTCGAAATTCTATTCGACCGACGCTTCCGGCTGCTCTACGTTGTTTTCGGAGCTCTGTTCTACCAGTCCGCCAATTCCTCCATTAGAGTTCTTGTTTCTAAGGATCCTCTATTAGTCAACACCTCCGTTTCTCTCCTTCACTCCATTGTCACCTCTGCTTCAGTACTGTTTGTTTTGGTGAACCGGTGGCTGAGTTATGATTCCAGTTCAGAGGGGATGTTTGAGCATTCACAATTGTTTGGAGGAACATGGCCATGGGCTTATGCAGCTTTGTGCTTCTCATGTGGATATTTTGCATACGATCAGTGGGATATGCTGCGATACGGACTATATAGTGGTTGGATTCCTGCGATCCTGGTTCATCATCTGGTTCTTCTCATTTGCTTTACACTTGCTTTGTATAGGAATGTCACCATCAATTATCTCATTCTCACTCTCGTTTGCGAGATGCATTCTATCTTCCTCCATGTAAGGCGATTGCGAAGGATGGCTGGTGTTCGTGATGCCAAGAGCATTATCGTGAAAGTTGAATGGATTCTCAACTGGCTAACATTTGTTTTCGCAAGGTTTGTTCCACACATTCTCATTACTGTCAAGCTCATCATAGATGCTTACAAGTTCGATAAAGGCGTAGAGCTGCCACTTGCATTGTCTGGGATGACTGGCATGAACCTGCTGAATGCTTTGCTTGGTATTGATCTTTTAAACGCTGTAAGGAAAGAGAGTAATTACAAGAAAACTGATGACACTCATCATGAATGAAGGAGGACTAACTTTGGTGGAATTGTATTTTGTTCTGTTTATTATATATTTTGTAGAGAGAATGAATAGAAGACTATTCAAGAGAAAATCATTTTAAAGACGGAAGAGAAATTTGTATAATATCAGTCT

Coding sequence (CDS)

ATGGCGGGGAGAACACTGTTGAAGGAGAAGAGCAGGGCAGGAAGCTTCTTCTCCGCCACATTACTGCTTTGGTCAGTTTCTCTTTGGTTCGAAATTCTATTCGACCGACGCTTCCGGCTGCTCTACGTTGTTTTCGGAGCTCTGTTCTACCAGTCCGCCAATTCCTCCATTAGAGTTCTTGTTTCTAAGGATCCTCTATTAGTCAACACCTCCGTTTCTCTCCTTCACTCCATTGTCACCTCTGCTTCAGTACTGTTTGTTTTGGTGAACCGGTGGCTGAGTTATGATTCCAGTTCAGAGGGGATGTTTGAGCATTCACAATTGTTTGGAGGAACATGGCCATGGGCTTATGCAGCTTTGTGCTTCTCATGTGGATATTTTGCATACGATCAGTGGGATATGCTGCGATACGGACTATATAGTGGTTGGATTCCTGCGATCCTGGTTCATCATCTGGTTCTTCTCATTTGCTTTACACTTGCTTTGTATAGGAATGTCACCATCAATTATCTCATTCTCACTCTCGTTTGCGAGATGCATTCTATCTTCCTCCATGTAAGGCGATTGCGAAGGATGGCTGGTGTTCGTGATGCCAAGAGCATTATCGTGAAAGTTGAATGGATTCTCAACTGGCTAACATTTGTTTTCGCAAGGTTTGTTCCACACATTCTCATTACTGTCAAGCTCATCATAGATGCTTACAAGTTCGATAAAGGCGTAGAGCTGCCACTTGCATTGTCTGGGATGACTGGCATGAACCTGCTGAATGCTTTGCTTGGTATTGATCTTTTAAACGCTGTAAGGAAAGAGAGTAATTACAAGAAAACTGATGACACTCATCATGAATGA

Protein sequence

MAGRTLLKEKSRAGSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRVLVSKDPLLVNTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAALCFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCEMHSIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDAYKFDKGVELPLALSGMTGMNLLNALLGIDLLNAVRKESNYKKTDDTHHE

Homology

[Close]

BLAST of IVF0007678 vs. ExPASy Swiss-Prot
Match: A8WGS4 (TLC domain-containing protein 2 OS=Danio rerio OX=7955 GN=tlcd2 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 8.1e-08
Identity = 60/218 (27.52%), Postives = 111/218 (50.92%), Query Frame = 0


Query: 69  NTSVSLLHSIVTSA-SVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAALCFSCGYF 128
           N S S +HS++T   SVL      +  +   +E + E   +F      ++A +  S GYF
Sbjct: 42  NISTSFVHSLITGVWSVLC-----FCMHPQMAEDLIETHSVF------SHALVSVSIGYF 101

Query: 129 AYDQWDM-LRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCEMHSIFLHV 188
            YD  DM +   +   W   +L HH+V++ CF +++     + + ++ L+ E++S+FLH+
Sbjct: 102 IYDFLDMVINQKIIHSW--ELLFHHVVVITCFGISVLTCRYVGFAVVALLVEINSVFLHL 161

Query: 189 RRLRRMAGVRDAKSIIVKVEWILNWLTFVFAR-----FVPHILITVKLIIDAYKFDKGVE 248
           R++ RMA +  AKS   +V  ++N  T+V  R     ++   L+  + +I  + +  G  
Sbjct: 162 RQVLRMANL--AKSTFYRVNSMINLGTYVVFRINTLAWMTRWLVLNRDLIPLFSYTIG-- 221

Query: 249 LPLALSGMTGMN--LLNALLGIDLLNAVRKESNYKKTD 278
             + L+ MT MN  L   L+  D + A R++   K+ +
Sbjct: 222 -SVGLAIMTAMNIVLFYRLMRSDFMKASREKELRKEKE 241

[Close]

BLAST of IVF0007678 vs. ExPASy Swiss-Prot
Match: Q8VC26 (TLC domain-containing protein 2 OS=Mus musculus OX=10090 GN=Tlcd2 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 9.9e-06
Identity = 53/197 (26.90%), Postives = 95/197 (48.22%), Query Frame = 0


Query: 69  NTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAALCFSCGYFA 128
           N  VSL+HS+++       LV  W      ++ + +H        PWA   +  S GYFA
Sbjct: 40  NIFVSLIHSLLSGVG---ALVGLWQFPQMVTDPINDHP-------PWARVLVAVSVGYFA 99

Query: 129 YDQWDML-RYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCEMHSIFLHVR 188
            D  DML    L   W   +L HHL ++ C + A+     + + +++L+ E++SI LH+R
Sbjct: 100 ADGVDMLWNQTLAQAW--DLLCHHLAVVSCLSTAVVSGHYVGFSMVSLLLELNSICLHLR 159

Query: 189 RLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDAYKFDKGVELPLALS 248
           +L  ++    A S+  +V    +  T V  R +P   +++ L    Y+    + L L ++
Sbjct: 160 KLLLLS--HKAPSLAFRVSSWASLATLVLFRLLPLGWMSLWLSRQHYQLSLALVL-LCVA 219

Query: 249 GMTGMNLLNALLGIDLL 265
           G+  +  ++   GI +L
Sbjct: 220 GLVTVGSISISTGIRIL 221

[Close]

BLAST of IVF0007678 vs. ExPASy TrEMBL
Match: A0A1S3CRX5 (TLC domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103504058 PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 5.6e-153
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MAGRTLLKEKSRAGSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRVL 60
           MAGRTLLKEKSRAGSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRVL
Sbjct: 1   MAGRTLLKEKSRAGSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRVL 60

Query: 61  VSKDPLLVNTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAAL 120
           VSKDPLLVNTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAAL
Sbjct: 61  VSKDPLLVNTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAAL 120

Query: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCEMH 180
           CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCEMH
Sbjct: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCEMH 180

Query: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDAYKFDKGV 240
           SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDAYKFDKGV
Sbjct: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDAYKFDKGV 240

Query: 241 ELPLALSGMTGMNLLNALLGIDLLNAVRKESNYKKTDDTHHE 283
           ELPLALSGMTGMNLLNALLGIDLLNAVRKESNYKKTDDTHHE
Sbjct: 241 ELPLALSGMTGMNLLNALLGIDLLNAVRKESNYKKTDDTHHE 282

[Close]

BLAST of IVF0007678 vs. ExPASy TrEMBL
Match: A0A0A0KH54 (TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G385110 PE=4 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.3e-146
Identity = 270/282 (95.74%), Postives = 276/282 (97.87%), Query Frame = 0


Query: 1   MAGRTLLKEKSRAGSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRVL 60
           MAGRTLLKEKSRA SFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIR+L
Sbjct: 1   MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLL 60

Query: 61  VSKDPLLVNTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAAL 120
           +SKDPLLVNTSVSLLHSI+TSASVLFVLVNRWLSY S SEGMFEHSQLFGGTWPWA+AAL
Sbjct: 61  LSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYGSGSEGMFEHSQLFGGTWPWAFAAL 120

Query: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCEMH 180
           CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYL LTL+CEMH
Sbjct: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMH 180

Query: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDAYKFDKGV 240
           SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDA KFDKGV
Sbjct: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGV 240

Query: 241 ELPLALSGMTGMNLLNALLGIDLLNAVRKESNYKKTDDTHHE 283
           ELPLALSGM GMNLLNALLGIDLLNAV+KESNYKKTDDTHHE
Sbjct: 241 ELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE 282

[Close]

BLAST of IVF0007678 vs. ExPASy TrEMBL
Match: A0A6J1FID3 (TLC domain-containing protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111445599 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 3.2e-132
Identity = 242/282 (85.82%), Postives = 261/282 (92.55%), Query Frame = 0


Query: 1   MAGRTLLKEKSRAGSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRVL 60
           MAGRT+LKEKSRAGSFFSATL+LW+VSLWFEILFDRRF LLY+VFGALFYQSANS+IR L
Sbjct: 1   MAGRTVLKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60

Query: 61  VSKDPLLVNTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAAL 120
           +SK+PL+VNT+VSLLHSI+TSASVLFVL NRWLS+   S+GMFEHSQLFGGTWPWAYAAL
Sbjct: 61  ISKEPLVVNTAVSLLHSIITSASVLFVLANRWLSH--GSDGMFEHSQLFGGTWPWAYAAL 120

Query: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCEMH 180
           CFSCGYFAYDQWDML+Y LYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTL+CE+H
Sbjct: 121 CFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELH 180

Query: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDAYKFDKGV 240
           SIFLHVRRLRRMAGVRDA+S IVKVEW LNWLTF FARFVPHILIT KLI+DA KFDKGV
Sbjct: 181 SIFLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFTFARFVPHILITAKLIMDASKFDKGV 240

Query: 241 ELPLALSGMTGMNLLNALLGIDLLNAVRKESNYKKTDDTHHE 283
           ELPLAL GM  MNLLN  LGIDL NAV+KESNY+K D  HHE
Sbjct: 241 ELPLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHLHHE 280

[Close]

BLAST of IVF0007678 vs. ExPASy TrEMBL
Match: A0A6J1K0R9 (TLC domain-containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111489133 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 1.2e-131
Identity = 240/282 (85.11%), Postives = 262/282 (92.91%), Query Frame = 0


Query: 1   MAGRTLLKEKSRAGSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRVL 60
           MAGRT+LKE+SRAGSFFSATL+LW+VSLWFEILFDRRF LLY+VFGALFYQSANS+IR L
Sbjct: 1   MAGRTVLKEESRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60

Query: 61  VSKDPLLVNTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAAL 120
           +SK+PL+VNT+VSLLHSI+TSASVLF+LVNRWLS+    +GMFEHSQLFGGTWPWAYAAL
Sbjct: 61  ISKEPLVVNTAVSLLHSIITSASVLFILVNRWLSH--GLDGMFEHSQLFGGTWPWAYAAL 120

Query: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCEMH 180
           CFSCGYFAYDQWDML+Y LYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTL+CE+H
Sbjct: 121 CFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELH 180

Query: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDAYKFDKGV 240
           SIFLHVRRLRRMAGVRDA+S IVKVEW LNWLTF+FARFVPHILIT KLI+DA KFDKGV
Sbjct: 181 SIFLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGV 240

Query: 241 ELPLALSGMTGMNLLNALLGIDLLNAVRKESNYKKTDDTHHE 283
           ELPLAL GM  MNLLN  LGIDL NAV+KESNY+K D  HHE
Sbjct: 241 ELPLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHFHHE 280

[Close]

BLAST of IVF0007678 vs. ExPASy TrEMBL
Match: A0A6J1CKF5 (TLC domain-containing protein 2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011955 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 3.2e-124
Identity = 234/282 (82.98%), Postives = 252/282 (89.36%), Query Frame = 0


Query: 1   MAGRTLLKEKSRAGSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRVL 60
           MAGR + KEKSRAGSFFSATL+LW VS+WFEILF RR  LLYVVFGALFYQSAN ++R L
Sbjct: 1   MAGRRVPKEKSRAGSFFSATLVLWIVSIWFEILFYRRSELLYVVFGALFYQSANWTVRAL 60

Query: 61  VSKDPLLVNTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAAL 120
           VSKDPL VNTSVSLLHS +TSASVLF+LV++WLSY   S GMFEHSQL GGTW  AYAAL
Sbjct: 61  VSKDPLFVNTSVSLLHSTITSASVLFILVSQWLSY--GSHGMFEHSQLVGGTWSGAYAAL 120

Query: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCEMH 180
           CFSCGYFAYDQWDML Y LYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTL+CE+H
Sbjct: 121 CFSCGYFAYDQWDMLLYQLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELH 180

Query: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDAYKFDKGV 240
           SIFLHVRRLRRMAGVRDAKSI+VKVEWILNWLTFVFAR VPHILIT KL++DA KFD+GV
Sbjct: 181 SIFLHVRRLRRMAGVRDAKSIVVKVEWILNWLTFVFARVVPHILITAKLVVDASKFDRGV 240

Query: 241 ELPLALSGMTGMNLLNALLGIDLLNAVRKESNYKKTDDTHHE 283
           ELPLALSGM GMNLLNA LGIDL+NAV+KES Y+K D    E
Sbjct: 241 ELPLALSGMAGMNLLNAFLGIDLINAVKKESKYQKRDHPRRE 280

[Close]

BLAST of IVF0007678 vs. NCBI nr
Match: XP_008466713.1 (PREDICTED: TLC domain-containing protein 2 [Cucumis melo])

HSP 1 Score: 546 bits (1406), Expect = 1.68e-195
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MAGRTLLKEKSRAGSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRVL 60
           MAGRTLLKEKSRAGSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRVL
Sbjct: 1   MAGRTLLKEKSRAGSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRVL 60

Query: 61  VSKDPLLVNTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAAL 120
           VSKDPLLVNTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAAL
Sbjct: 61  VSKDPLLVNTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAAL 120

Query: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCEMH 180
           CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCEMH
Sbjct: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCEMH 180

Query: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDAYKFDKGV 240
           SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDAYKFDKGV
Sbjct: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDAYKFDKGV 240

Query: 241 ELPLALSGMTGMNLLNALLGIDLLNAVRKESNYKKTDDTHHE 282
           ELPLALSGMTGMNLLNALLGIDLLNAVRKESNYKKTDDTHHE
Sbjct: 241 ELPLALSGMTGMNLLNALLGIDLLNAVRKESNYKKTDDTHHE 282

[Close]

BLAST of IVF0007678 vs. NCBI nr
Match: XP_004150440.1 (TLC domain-containing protein 2 [Cucumis sativus] >KGN47727.1 hypothetical protein Csa_018230 [Cucumis sativus])

HSP 1 Score: 525 bits (1351), Expect = 4.05e-187
Identity = 270/282 (95.74%), Postives = 276/282 (97.87%), Query Frame = 0


Query: 1   MAGRTLLKEKSRAGSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRVL 60
           MAGRTLLKEKSRA SFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIR+L
Sbjct: 1   MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLL 60

Query: 61  VSKDPLLVNTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAAL 120
           +SKDPLLVNTSVSLLHSI+TSASVLFVLVNRWLSY S SEGMFEHSQLFGGTWPWA+AAL
Sbjct: 61  LSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYGSGSEGMFEHSQLFGGTWPWAFAAL 120

Query: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCEMH 180
           CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYL LTL+CEMH
Sbjct: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMH 180

Query: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDAYKFDKGV 240
           SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDA KFDKGV
Sbjct: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGV 240

Query: 241 ELPLALSGMTGMNLLNALLGIDLLNAVRKESNYKKTDDTHHE 282
           ELPLALSGM GMNLLNALLGIDLLNAV+KESNYKKTDDTHHE
Sbjct: 241 ELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE 282

[Close]

BLAST of IVF0007678 vs. NCBI nr
Match: XP_038884583.1 (TLC domain-containing protein 2 [Benincasa hispida])

HSP 1 Score: 494 bits (1272), Expect = 4.12e-175
Identity = 255/282 (90.43%), Postives = 269/282 (95.39%), Query Frame = 0


Query: 1   MAGRTLLKEKSRAGSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRVL 60
           MAGRT+LKEK RAGSFFSATL+LWSVSL FEILFDRRF LLYVVFGALFYQSANS+IR L
Sbjct: 1   MAGRTVLKEKRRAGSFFSATLVLWSVSLCFEILFDRRFELLYVVFGALFYQSANSAIRFL 60

Query: 61  VSKDPLLVNTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAAL 120
           VSKDPLLVNTSVSLLHS +TSASVLFVLVNRWLSY S  EG+FEHSQLFGGTWPWAYAAL
Sbjct: 61  VSKDPLLVNTSVSLLHSTITSASVLFVLVNRWLSYGS--EGIFEHSQLFGGTWPWAYAAL 120

Query: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCEMH 180
           CFSCGYFAYDQWDML+YGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTL+CEMH
Sbjct: 121 CFSCGYFAYDQWDMLQYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICEMH 180

Query: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDAYKFDKGV 240
           SIFLHVRRLRRMAGVRDAKS+IVKVEWILNWLTFVFARFVPHILIT KLI+DA KFDKG+
Sbjct: 181 SIFLHVRRLRRMAGVRDAKSVIVKVEWILNWLTFVFARFVPHILITAKLIMDASKFDKGI 240

Query: 241 ELPLALSGMTGMNLLNALLGIDLLNAVRKESNYKKTDDTHHE 282
           ELPLALSGM GMNLLNALLG+DLL+AVRKES Y+KTD +HHE
Sbjct: 241 ELPLALSGMAGMNLLNALLGMDLLSAVRKESYYQKTDHSHHE 280

[Close]

BLAST of IVF0007678 vs. NCBI nr
Match: XP_023550889.1 (TLC domain-containing protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 477 bits (1227), Expect = 2.96e-168
Identity = 242/282 (85.82%), Postives = 263/282 (93.26%), Query Frame = 0


Query: 1   MAGRTLLKEKSRAGSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRVL 60
           MAGRT+LKEKSRAGSFFSATL+LW+VSLWFEILFDRRF LLY+VFGALFYQSANS+IR L
Sbjct: 1   MAGRTMLKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60

Query: 61  VSKDPLLVNTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAAL 120
           +SK+PL+VNT+VSLLHSI+TSASVLFVLVNRWLS+ S  +GMFEHSQLFGGTWPWAYAAL
Sbjct: 61  ISKEPLVVNTAVSLLHSIITSASVLFVLVNRWLSHGS--DGMFEHSQLFGGTWPWAYAAL 120

Query: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCEMH 180
           CFSCGYFAYDQWDML+Y LYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTL+CE+H
Sbjct: 121 CFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELH 180

Query: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDAYKFDKGV 240
           SIFLHVRRLRRMAGVRDA+S IVKVEW LNWLTF+FARFVPHILIT KLI+DA KFDKGV
Sbjct: 181 SIFLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGV 240

Query: 241 ELPLALSGMTGMNLLNALLGIDLLNAVRKESNYKKTDDTHHE 282
           ELPLAL GM  MNLLN  LGIDL NAV+KESNY+K D  H+E
Sbjct: 241 ELPLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHLHNE 280

[Close]

BLAST of IVF0007678 vs. NCBI nr
Match: XP_022939854.1 (TLC domain-containing protein 2 [Cucurbita moschata] >KAG6578966.1 TLC domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016488.1 TLC domain-containing protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 476 bits (1226), Expect = 4.20e-168
Identity = 242/282 (85.82%), Postives = 261/282 (92.55%), Query Frame = 0


Query: 1   MAGRTLLKEKSRAGSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRVL 60
           MAGRT+LKEKSRAGSFFSATL+LW+VSLWFEILFDRRF LLY+VFGALFYQSANS+IR L
Sbjct: 1   MAGRTVLKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60

Query: 61  VSKDPLLVNTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAAL 120
           +SK+PL+VNT+VSLLHSI+TSASVLFVL NRWLS+ S  +GMFEHSQLFGGTWPWAYAAL
Sbjct: 61  ISKEPLVVNTAVSLLHSIITSASVLFVLANRWLSHGS--DGMFEHSQLFGGTWPWAYAAL 120

Query: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCEMH 180
           CFSCGYFAYDQWDML+Y LYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTL+CE+H
Sbjct: 121 CFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELH 180

Query: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDAYKFDKGV 240
           SIFLHVRRLRRMAGVRDA+S IVKVEW LNWLTF FARFVPHILIT KLI+DA KFDKGV
Sbjct: 181 SIFLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFTFARFVPHILITAKLIMDASKFDKGV 240

Query: 241 ELPLALSGMTGMNLLNALLGIDLLNAVRKESNYKKTDDTHHE 282
           ELPLAL GM  MNLLN  LGIDL NAV+KESNY+K D  HHE
Sbjct: 241 ELPLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHLHHE 280

[Close]

BLAST of IVF0007678 vs. TAIR 10
Match: AT1G21790.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 362.5 bits (929), Expect = 3.2e-100
Identity = 181/270 (67.04%), Postives = 224/270 (82.96%), Query Frame = 0


Query: 9   EKSRAGSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRVLVSKDPLLV 68
           +K+ AG FF ATLLLW VS+ FEI F+ R  LL+V+ G  F+Q  N  +R  +S+DP+ V
Sbjct: 12  KKNGAGQFFLATLLLWLVSVVFEIAFNLRTELLWVICGGCFFQLMNWVVRSWISRDPIFV 71

Query: 69  NTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAALCFSCGYFA 128
           NTSVSLLHSI+TSASV+F+L+N+ L+     + MF+HS+L GGTW WAY ALCFSCGYFA
Sbjct: 72  NTSVSLLHSIITSASVVFILLNQCLA--KGLDEMFDHSELVGGTWKWAYPALCFSCGYFA 131

Query: 129 YDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCEMHSIFLHVRR 188
           YDQWDML+Y LYSG IP+ILVHHLVLL+CFTLALYRNVTINYLILTL+CEMHSIFLHVR+
Sbjct: 132 YDQWDMLQYRLYSGLIPSILVHHLVLLVCFTLALYRNVTINYLILTLICEMHSIFLHVRK 191

Query: 189 LRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDAYKFDKGVELPLALSG 248
           LRRMAG+RD+ + +VK+EW+LNW  FVFAR +PHILIT+KLI DA+KF KGVELPLALSG
Sbjct: 192 LRRMAGIRDSNTALVKLEWVLNWTAFVFARCIPHILITIKLIKDAHKFGKGVELPLALSG 251

Query: 249 MTGMNLLNALLGIDLLNAVRKESNYKKTDD 279
           M GMN+LN  LG+DL +A R+E ++++  +
Sbjct: 252 MAGMNILNVGLGLDLFHAFRRERSHRRNQE 279

The following BLAST results are available for this feature:

BLAST of IVF0007678 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8WGS4	8.1e-08	27.52	TLC domain-containing protein 2 OS=Danio rerio OX=7955 GN=tlcd2 PE=2 SV=1	[more]
Q8VC26	9.9e-06	26.90	TLC domain-containing protein 2 OS=Mus musculus OX=10090 GN=Tlcd2 PE=2 SV=1	[more]

BLAST of IVF0007678 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CRX5	5.6e-153	100.00	TLC domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103504058 PE=4 SV=...	[more]
A0A0A0KH54	1.3e-146	95.74	TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G385110 PE=4 SV...	[more]
A0A6J1FID3	3.2e-132	85.82	TLC domain-containing protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111445599 PE...	[more]
A0A6J1K0R9	1.2e-131	85.11	TLC domain-containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111489133 PE=4...	[more]
A0A6J1CKF5	3.2e-124	82.98	TLC domain-containing protein 2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of IVF0007678 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466713.1	1.68e-195	100.00	PREDICTED: TLC domain-containing protein 2 [Cucumis melo]	[more]
XP_004150440.1	4.05e-187	95.74	TLC domain-containing protein 2 [Cucumis sativus] >KGN47727.1 hypothetical prote...	[more]
XP_038884583.1	4.12e-175	90.43	TLC domain-containing protein 2 [Benincasa hispida]	[more]
XP_023550889.1	2.96e-168	85.82	TLC domain-containing protein 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022939854.1	4.20e-168	85.82	TLC domain-containing protein 2 [Cucurbita moschata] >KAG6578966.1 TLC domain-co...	[more]

BLAST of IVF0007678 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21790.1	3.2e-100	67.04	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006634	TRAM/LAG1/CLN8 homology domain	SMART	SM00724	lag1_27	coord: 62..269 e-value: 1.1E-28 score: 111.2
IPR006634	TRAM/LAG1/CLN8 homology domain	PFAM	PF03798	TRAM_LAG1_CLN8	coord: 69..256 e-value: 4.5E-18 score: 65.7
IPR006634	TRAM/LAG1/CLN8 homology domain	PROSITE	PS50922	TLC	coord: 62..272 score: 13.784077
None	No IPR available	PANTHER	PTHR13439	CT120 PROTEIN	coord: 16..277
None	No IPR available	PANTHER	PTHR13439:SF4	TLC DOMAIN-CONTAINING PROTEIN FLD-1	coord: 16..277

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0007678.1	IVF0007678.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071709	membrane assembly
biological_process	GO:0055091	phospholipid homeostasis
biological_process	GO:0007009	plasma membrane organization
biological_process	GO:0097035	regulation of membrane lipid distribution
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane