IVF0007582 (gene) Melon (IVF77) v1

Overview


Name	IVF0007582
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	binding partner of ACD11 1-like
Location	chr08: 23183050 .. 23188117 (+)
RNA-Seq Expression	IVF0007582
Synteny	IVF0007582

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGTAACAGATCATTCAATTTCCATTACTTTCTTCAACTTTTGCTTCTCTGATTTCAGTTATTGACGTATTTGGAGTATTTTTAGAAAATATTATTTTCAATCCTTATATATTATATATTTACTTTAATTTGGATATATATAGGATTGTAATCCTTGATTATTATGAATGAAATACCAATATTCTAGACAAACTACCATCAATAATCAACTTCAATTGATTTCTTCTCTTCAGTCTCAGACTCGGACGGTTCAAGTCAAGCACGTTTCGAATCTAGCTACTGAGAGGGAGATAAACGAGTTCTTCTCCTTCTCTGGAGAAATCGAACACATTGAGATTCAATGGTAGGTCCTTAGCTCTGTGTTACTCTGAACTAAATTGCAAAGAAGTTGTGCATGATTGGTTGATTATGATTCACTTTTCTTTGCGGTTGATTTCGTTATCGTAGGTTTCTTATCAAATGTAGTTAGCATTTAATAAGCATAAGGGTTGTAAACTTGTAATATTGTTATAGCTTACTAGTAACTAAGGAATCCCTTGCTGAGTTTTGACAAATAGTAGAAATGTAATTGTGGAAGTGATGGTTTCCTCCACTGTAAAAGGAGGTTATGCCTTTAGTTTGAAATTGTGACAGTTAAAAAGAAACACTTTTAATTCTGAGTATGCTAGCTCTTATTAAATTCTCTGTTGTATTCTCTTTTTTAGTTTGAGAGTGAACTTAAAGAGTGTGAGTACTGAGTAGTATGAAAAATTTGAAAGAGTGCACTTGTAATTGGGGTCGGATAGAGAATTATTCAACGTGATTGTAAGAAGTTTTTGTATTGTGAATTTCTTTTTGAAATTATGGTTTTTCTCTGGTTTGGAGGACGTTTTCTTACGTTAATTCTTGTATTTCCAGTTTTATTGCTTTCTTTTAGTTTCTCTATTATTTGTTTTTCTTGCTTTTTCATGCGGTAGTCGTGGGAAGTTTTTCCTAACAACATAATTTTTGAGCCAACGTCACACTTGGGAAGATAAGAAGGGTCTAATGGATTGTAACTTGTTATTATCTTTACTTTACCACTGTGATGCAGTGTTGAGTAAGCAATTTCTGGAGTGTTATTCTAATTTATTCTTGTTGGTGCAGTGAACAAGGGGAATCCAGGACTGCGTTCGTCACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGCTATTATCGGTATTTCATTATCTCAATTCTCTTTCATATCCACGAAGTCATTATCATGTGTGTTTGTTGAACTTGTGGTTTTACAATGAATGTCAGAAGTTTGGTTCATGTTGGTCTACATTTGGCTGTGTTTACCTTCTTATTTAAGATGTGTTGTTTTTAAGTGTCCAGTTAGTTCTATATCATCTTTAGTTTTTTCCCCTTCATTTTTCTGCCATTAATTTTGATTGAATTGAAAGGTGGTGGATGAGTGTCATCTTGATTTTTTCCCCTTTCCTTTTCTTAATGGAAATACATTTTTTTCAGAAAAAGATTTTCTACTTGTAACCTCGAAGATTTTCTTAATGGAAATAAAACTTCTAAAAATACTTACAATTATAGCAAAATAGAAGATCTATACGTGATAGACTACTATCTATATCTATCGTGATACAGATAGACATCGACACAACTAGAAGTTTATCTTACATGTTTCTAGAAAAAGAAGGGAACCGATACCTTTTCTTTGCATGATCATTTCTTTACGCAATAATGGAATTATTTAATCTTTTCATTTTTCAGCATGCAACAGTGGAAATATACCTTTTTTTCTTCTTACCTTGTCTATGCCAAAAGCTACTATAGATAATTTCAATCATTTATTTATTTGCCATTTAGGGAGCGACAATCGTAGATCAGACTGTGAGCATATCTCCTGTTGAAAATCATGTACCAAGAAGAGAAATGCAGGTATTATTCTTATATTTGAATATATTTCAAGGCTTGCCTAGTTGTTTATTCTATATTCAATATTTTAAGTTAACTATGTTTGCTGGAAGTACGGGTTGTGGACAATGCTGCATGTCTCACTCCTACAGAAAATAATTTTCCTAACACTGAGGTAAATGTGTTGACCCCACTCTATGAATATCAAGTATTATTTGAGTAGCATTTTCGTCCATGTTGACATACTTGTTGGAATGCATTGAAATTTTATTTGATACTTCCAATGACCAATTATAGAGGCACCTCTTTATCTGTAATTTGAACTATTGTATAAAATAATAAATTGCCTCCCTCTCTTCTTTGACGTAGCCAACACATTGTTTGTGAACCACGTAAATCTCTAAGGCAATTCTCTTCTATTTACATTTTCTTGATTATCTTTATTTGCCAATTGCATAACAATACTATTAAAGAAAAACCAAGAGGCTGGGGAGTTTCATCAAATGGAAAAGTTTAGGACTTGTTTCTTGTTTCTTGTCTTTTGATTTTCTTAAAGTGATGTAGATGGATGAAAAGTAAAACCTCCATTTAGTGCCTCTGTCATGAACCTCATTACACATCTAAAACTAGGGTGAAGAACGGGTGAAACAGTTTCACACTTTTAGTTTTGATGTGGATGGTGAAACAGTTCCTTGCTTTATTTAACTATACAAGTGGATGGTGAGGCACCTTATGTTTTTTCCAACCTTAAATCTTTTGGTGCTTACAGGATTCTGGAAGCCAGCCTAGCAGTGGAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAAATGTGCTTGCTAAAGGTTCAGTAATTGGACAAGATGCCATGAACAAAGCGAAGGCATTTGACGAAAAGCATCGGCTAACAGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAGAAGGGTTGGGCTGACAGAGAAATTGACGGTTGGGATATCAGTGGTTAACGAGAAAGTCAAGTCTGTCGATCAAAATCTTCACGTTTCTGATAAAACAAGGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAGTGATACAGGATCTGCTGTTAAAACAAGCAAGTACGAATCATCATTCATGAGGGAACTTTTGTTTGCATTGTCATTCACACTACTCTATTCTGTTAGCTTATCCCCTAATTAAGCAACTTTTACATCTCTTCCACTTGCTATCTTCAAATTTTAGAATCCGAATATTCTCCACGCCTAGAAAGCAGAAAATTGGTGGTGTTTGAGATGTTGAGTTGGTTATTATATTTACGATTATAATAGTCTATATTTGGAATAGATACTGTTTTAGTCTAGATTATAATAGTCTATGTCTAGGGGATAGACTGTTTTAGTATGTGTAGAAAATAGTAAACACACTATGGAAAATATGGAAATAGAGGATGAGTAGCACAATGTAAGATTCGAAATAGTAACACTATAATTAGTTGTAGGTTATAATAATTGGAAACACCAATTATTATAATGTGGAAACACCAATTATTATAATTGGAATCCTAAACATGGAGTGAACTATTATAATCCAGTTCACCCACTTGAAGTTGGGGCCAAACACTCCCTTAGTTTTCTATAGTAGCTCCTAAGCAACTCCTAAAGCGTAACTTATTGAACTTTAGATTATTATCCAAATAAATTACAATGGTTCTATCATCCTTTGTGACAATAGACCGAAGTGAATTTGATTGTTTCATTCTATCTTGGCGTTGAACAGGTATGTGACAGCAAGTGCTGCTTGGTTAAATGGTGCATTTGGCAAGGTCGCAAAAGCAGGGCAGGCAGCAGGAACGAAAACTAGAGAGAAATTCCATTTGGCCATGTCAAACTTAACTTCAAAGGTGCGTTTATGAATGGTGACATAAAAGTTAGGATTCTTCGTAAACTACTTTGGTGTAACAGTATTAGAAACAATAGATTTTATAAATTAGGTTTCGTTTGATAACCGTTTGATAACCATTTCGTTTTCCGCTTTCTAAATGTATGTCTATTTTTTCTCAATTTTTTACGATGATTTGTATCTTCTCGAATTTATAGTCAATTGTTTTTTAAAAAACAAGTTTTTAAAAAAACTATTTTTTTTTTTTTAAAACACTTGAAATTTAGAGGTGGTTGGAATGGGTGTACTTAATTTTTAAGAATTACAAACTTAAACCAAAAGAATTTAGGTTTTTTGGAGTCTTAAAGAAAAGTACAAGTAATTAATAACCAGAAGTATTAATTGAAAGAGACTGATATGACAGTTAAATTCAAAGTATTAGCATATATAACAATATTTAATAAAATGCAAATGTATCAAAATCTATCAGAGTCTATCAATGATGATAGAAGTCTACCGTTGATAAACTATGCTATATTTGTTACTTTTTAAAATGTTATTATAATACTCGATTATTATCCCTAAAATTGCTATTCTTTATAATTACTCTATTTAAAATCAACAGCTTGATGAAAGGTTTAGCCAAATCCATGGAAAAAAAAAAAAGAATGGTTCCTAATAGAGAGAAATCCCTTTACAACCTTGTTTCATTAGTGTTTAAAAGCTTTTTTCAAACAATCAATGTTTGCCTTTACCTGTTTTGAATTGATTTTTTTTTCTCCTCTAAGGATAAAGACAATACAACAAAACCAAACAACAAATTTTGGTTTCTAAGGGCTTAAAGAAGCATTGTAAGTGAAAAAAAAAGTGTTTTTAAGCTCTTTGAAAATTTGTTCAAACAGATCTTCAAAGACTTGCAAGAGTAAAAGAAATAGCCGATTAAAAAAAAGTAACTAGCTAATATTCTGTTAGGTAACTATTTTGTTTTTAGTTTCTAAAATTTATGTTTGTTTTCTCGTACTTTTTCTATCATAATTATTAGCTTAGTTTTCCTGAACATGTGAAGGTAGTGCTAACGAAGTTTAGAAACTTATGAGTGGTAATAGTATTTATTAACTTAAATTTTCAAAGCCAAATGATTATCAAACCAGCATTAGAAAAAACTAAGAGTTTATTGTAATCATGGAGGTTAACCTCCAAAGGTTCTTGTGTGGAATTCTTTTTAGTTGAAAGTGTAGAAGAAGATCCATTATTATTTTTTCTTTTGAAACATGTAGGAATCCCCTGTTGTTGCCTAA

mRNA sequence

ATGCAGTCTCAGACTCGGACGGTTCAAGTCAAGCACGTTTCGAATCTAGCTACTGAGAGGGAGATAAACGAGTTCTTCTCCTTCTCTGGAGAAATCGAACACATTGAGATTCAATGTGAACAAGGGGAATCCAGGACTGCGTTCGTCACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGCTATTATCGGGAGCGACAATCGTAGATCAGACTGTGAGCATATCTCCTGTTGAAAATCATGTACCAAGAAGAGAAATGCAGGTATTATTCTTATATTTGAATATATTTCAAGGCTTGCCTATACGGGTTGTGGACAATGCTGCATGTCTCACTCCTACAGAAAATAATTTTCCTAACACTGAGCAGTGGAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAAATGTGCTTGCTAAAGGTTCAGTAATTGGACAAGATGCCATGAACAAAGCGAAGGCATTTGACGAAAAGCATCGGCTAACAGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAGAAGGGTTGGGCTGACAGAGAAATTGACGGTTGGGATATCAGTGGTTAACGAGAAAGTCAAGTCTGTCGATCAAAATCTTCACGTTTCTGATAAAACAAGGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAGTGATACAGGATCTGCTGTTAAAACAAGCAAGTATGTGACAGCAAGTGCTGCTTGGTTAAATGGTGCATTTGGCAAGGTCGCAAAAGCAGGGCAGGCAGCAGGAACGAAAACTAGAGAGAAATTCCATTTGGCCATGTCAAACTTAACTTCAAAGGAATCCCCTGTTGTTGCCTAA

Coding sequence (CDS)

ATGCAGTCTCAGACTCGGACGGTTCAAGTCAAGCACGTTTCGAATCTAGCTACTGAGAGGGAGATAAACGAGTTCTTCTCCTTCTCTGGAGAAATCGAACACATTGAGATTCAATGTGAACAAGGGGAATCCAGGACTGCGTTCGTCACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGCTATTATCGGGAGCGACAATCGTAGATCAGACTGTGAGCATATCTCCTGTTGAAAATCATGTACCAAGAAGAGAAATGCAGGTATTATTCTTATATTTGAATATATTTCAAGGCTTGCCTATACGGGTTGTGGACAATGCTGCATGTCTCACTCCTACAGAAAATAATTTTCCTAACACTGAGCAGTGGAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAAATGTGCTTGCTAAAGGTTCAGTAATTGGACAAGATGCCATGAACAAAGCGAAGGCATTTGACGAAAAGCATCGGCTAACAGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAGAAGGGTTGGGCTGACAGAGAAATTGACGGTTGGGATATCAGTGGTTAACGAGAAAGTCAAGTCTGTCGATCAAAATCTTCACGTTTCTGATAAAACAAGGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAGTGATACAGGATCTGCTGTTAAAACAAGCAAGTATGTGACAGCAAGTGCTGCTTGGTTAAATGGTGCATTTGGCAAGGTCGCAAAAGCAGGGCAGGCAGCAGGAACGAAAACTAGAGAGAAATTCCATTTGGCCATGTCAAACTTAACTTCAAAGGAATCCCCTGTTGTTGCCTAA

Protein sequence

MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAACLTPTENNFPNTEQWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA

Homology

[Close]

BLAST of IVF0007582 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 6.6e-47
Identity = 110/259 (42.47%), Postives = 166/259 (64.09%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60
           M SQ R+V+V ++S+ ATE +I EFFSFSGE+E I+IQ  +    +A+VTF++ +  E A
Sbjct: 1   MASQVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNE---HSAYVTFKETQGAETA 60

Query: 61  LLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAACLTPTENNFPN 120
           +LLSGA+I DQ+V I    N+ P                        AA    T+++   
Sbjct: 61  VLLSGASIADQSVIIELAPNYSP-----------------------PAAPHAETQSSGAE 120

Query: 121 TEQWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLT 180
           +      V +A++VV+++LAKG ++G+DA+ KAKAFDEKH  T++A+A V S D+++GL+
Sbjct: 121 S-----VVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLS 180

Query: 181 EKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNG 240
           +KLT G S+VNEK+K+VDQN  V+++T++   AAE+ +S  GSAV  ++YV    +W  G
Sbjct: 181 QKLTAGTSLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAG 228

Query: 241 AFGKVAKAGQAAGTKTREK 260
           AF +VA+A    G KT+EK
Sbjct: 241 AFNRVAQAAGEVGQKTKEK 228

[Close]

BLAST of IVF0007582 vs. ExPASy Swiss-Prot
Match: P87216 (Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vip1 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.8e-05
Identity = 54/253 (21.34%), Postives = 100/253 (39.53%), Query Frame = 0


Query: 8   VQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGAT 67
           V V ++S   TE++I++FFSF G++ +I  + + GE++TA + F  P A + ALLL  A 
Sbjct: 5   VIVTNISPEVTEKQISDFFSFCGKVSNISTE-KSGETQTAKIQFERPSATKTALLLQDAL 64

Query: 68  IVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAACLTPTENNFPNTEQWKMY 127
           +    + I+                             D  A  T  +      +  +  
Sbjct: 65  LGQNKIQITS---------------------------EDGGAASTTDQGGAGGDQAARQE 124

Query: 128 VNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGI 187
                 +++ +L++G  +    + K+   D+ + +++             G+ E    G+
Sbjct: 125 DKPRSAIISELLSRGYHLSDVTLEKSIQLDQSYGVSSKFK----------GILESALSGV 184

Query: 188 SVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAK 247
             VNE+    ++   V +K     FA   KL+ T S V T  +     A           
Sbjct: 185 RSVNERYHVTEKANEVDNK-----FAISDKLNRTSSLVSTYFHKALETA----------- 203

Query: 248 AGQAAGTKTREKF 261
           AG +AG K +  +
Sbjct: 245 AGTSAGQKVQNAY 203

[Close]

BLAST of IVF0007582 vs. ExPASy TrEMBL
Match: A0A5A7V2T9 (Binding partner of ACD11 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G00030 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.3e-138
Identity = 268/277 (96.75%), Postives = 268/277 (96.75%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAACLTPTENNFPN 120
           LLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAACLTPTENNFPN
Sbjct: 61  LLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAACLTPTENNFPN 120

Query: 121 TE-------QWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSF 180
           TE         KMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSF
Sbjct: 121 TEDSGSQPSSGKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSF 180

Query: 181 DRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTA 240
           DRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTA
Sbjct: 181 DRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTA 240

Query: 241 SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK 271
           SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
Sbjct: 241 SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK 277

[Close]

BLAST of IVF0007582 vs. ExPASy TrEMBL
Match: A0A1S3B5B6 (binding partner of ACD11 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485992 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 3.8e-130
Identity = 259/283 (91.52%), Postives = 259/283 (91.52%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAACLTPTENNFPN 120
           LLLSGATIVDQTVSISPVENHVPRREMQ               VVDNAACLTPTENNFPN
Sbjct: 61  LLLSGATIVDQTVSISPVENHVPRREMQ---------------VVDNAACLTPTENNFPN 120

Query: 121 TE-------QWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSF 180
           TE         KMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSF
Sbjct: 121 TEDSGSQPSSGKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSF 180

Query: 181 DRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTA 240
           DRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTA
Sbjct: 181 DRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTA 240

Query: 241 SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA 277
           SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA
Sbjct: 241 SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA 268

[Close]

BLAST of IVF0007582 vs. ExPASy TrEMBL
Match: A0A0A0LNE8 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G431170 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 7.9e-120
Identity = 240/283 (84.81%), Postives = 249/283 (87.99%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVS+LATEREI+EFFSFSGEIEHIEIQCEQGES+TAFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAACLTPTENNFPN 120
           LLLSGATIVD+ VSI+P ENHVPRREMQ             +RV DNAACLTPTENN P+
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREMQ------------EVRVADNAACLTPTENNSPS 120

Query: 121 TE-------QWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSF 180
            E         KMYVNRAQEVVA VLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSF
Sbjct: 121 IEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSF 180

Query: 181 DRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTA 240
           DRRVGLTEKLTVGISVVNEKVKSVDQ LHVSDKT AAIFAAERKL+DTGSAVKTSKYVTA
Sbjct: 181 DRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA 240

Query: 241 SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA 277
           SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SKE PVVA
Sbjct: 241 SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of IVF0007582 vs. ExPASy TrEMBL
Match: A0A5D3BPG7 (Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001350 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 2.3e-119
Identity = 239/283 (84.45%), Postives = 249/283 (87.99%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVS+LATEREI+EFFSFSGEIEHIEIQCEQGES+TAFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAACLTPTENNFPN 120
           LLLSGATIVD+ VSI+P ENHVPRRE+Q             +RV DNAACLTPTENN P+
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREIQ------------EVRVADNAACLTPTENNSPS 120

Query: 121 TE-------QWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSF 180
            E         KMYVNRAQEVVA VLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSF
Sbjct: 121 REDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSF 180

Query: 181 DRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTA 240
           DRRVGLTEKLTVGISVVNEKVKSVDQ LHVSDKT AAIFAAERKL+DTGSAVKTSKYVTA
Sbjct: 181 DRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA 240

Query: 241 SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA 277
           SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SKE PVVA
Sbjct: 241 SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of IVF0007582 vs. ExPASy TrEMBL
Match: A0A1S3CIA3 (binding partner of ACD11 1-like OS=Cucumis melo OX=3656 GN=LOC103501087 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 2.3e-119
Identity = 239/283 (84.45%), Postives = 249/283 (87.99%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVS+LATEREI+EFFSFSGEIEHIEIQCEQGES+TAFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAACLTPTENNFPN 120
           LLLSGATIVD+ VSI+P ENHVPRRE+Q             +RV DNAACLTPTENN P+
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREIQ------------EVRVADNAACLTPTENNSPS 120

Query: 121 TE-------QWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSF 180
            E         KMYVNRAQEVVA VLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSF
Sbjct: 121 REDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSF 180

Query: 181 DRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTA 240
           DRRVGLTEKLTVGISVVNEKVKSVDQ LHVSDKT AAIFAAERKL+DTGSAVKTSKYVTA
Sbjct: 181 DRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA 240

Query: 241 SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA 277
           SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SKE PVVA
Sbjct: 241 SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of IVF0007582 vs. NCBI nr
Match: KAA0060089.1 (binding partner of ACD11 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 501 bits (1289), Expect = 8.32e-178
Identity = 268/277 (96.75%), Postives = 268/277 (96.75%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAACLTPTENNFPN 120
           LLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAACLTPTENNFPN
Sbjct: 61  LLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAACLTPTENNFPN 120

Query: 121 TEQ-------WKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSF 180
           TE         KMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSF
Sbjct: 121 TEDSGSQPSSGKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSF 180

Query: 181 DRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTA 240
           DRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTA
Sbjct: 181 DRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTA 240

Query: 241 SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK 270
           SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
Sbjct: 241 SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK 277

[Close]

BLAST of IVF0007582 vs. NCBI nr
Match: XP_008441995.1 (PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 472 bits (1215), Expect = 1.01e-166
Identity = 259/283 (91.52%), Postives = 259/283 (91.52%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAACLTPTENNFPN 120
           LLLSGATIVDQTVSISPVENHVPRREMQ               VVDNAACLTPTENNFPN
Sbjct: 61  LLLSGATIVDQTVSISPVENHVPRREMQ---------------VVDNAACLTPTENNFPN 120

Query: 121 TEQ-------WKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSF 180
           TE         KMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSF
Sbjct: 121 TEDSGSQPSSGKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSF 180

Query: 181 DRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTA 240
           DRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTA
Sbjct: 181 DRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTA 240

Query: 241 SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA 276
           SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA
Sbjct: 241 SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA 268

[Close]

BLAST of IVF0007582 vs. NCBI nr
Match: XP_038881171.1 (binding partner of ACD11 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 444 bits (1142), Expect = 1.49e-155
Identity = 244/283 (86.22%), Postives = 252/283 (89.05%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVS+LATEREI+EFFSFSGEIEHIEIQCEQG+S+TAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAACLTPTENNFPN 120
           LLLSGATIVDQ VSIS  ENHVPRREMQ             +RVVDNAACLTPTENNFP+
Sbjct: 61  LLLSGATIVDQIVSISLAENHVPRREMQ------------EVRVVDNAACLTPTENNFPS 120

Query: 121 TEQ-------WKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSF 180
           TE         KMYVNRAQ VVA VLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSF
Sbjct: 121 TEDSASQPSSGKMYVNRAQVVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSF 180

Query: 181 DRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTA 240
           DRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT AAIFAAERKL+DTGSAVKTSKYVTA
Sbjct: 181 DRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA 240

Query: 241 SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA 276
            AAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKES VVA
Sbjct: 241 GAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESSVVA 271

[Close]

BLAST of IVF0007582 vs. NCBI nr
Match: XP_004151849.1 (binding partner of ACD11 1 [Cucumis sativus])

HSP 1 Score: 438 bits (1126), Expect = 4.08e-153
Identity = 240/283 (84.81%), Postives = 249/283 (87.99%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVS+LATEREI+EFFSFSGEIEHIEIQCEQGES+TAFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAACLTPTENNFPN 120
           LLLSGATIVD+ VSI+P ENHVPRREMQ             +RV DNAACLTPTENN P+
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREMQ------------EVRVADNAACLTPTENNSPS 120

Query: 121 TEQ-------WKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSF 180
            E         KMYVNRAQEVVA VLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSF
Sbjct: 121 IEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSF 180

Query: 181 DRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTA 240
           DRRVGLTEKLTVGISVVNEKVKSVDQ LHVSDKT AAIFAAERKL+DTGSAVKTSKYVTA
Sbjct: 181 DRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA 240

Query: 241 SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA 276
           SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SKE PVVA
Sbjct: 241 SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of IVF0007582 vs. NCBI nr
Match: XP_008462804.1 (PREDICTED: binding partner of ACD11 1-like [Cucumis melo] >KAA0066322.1 binding partner of ACD11 1-like [Cucumis melo var. makuwa] >TYK00958.1 binding partner of ACD11 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 436 bits (1122), Expect = 1.66e-152
Identity = 239/283 (84.45%), Postives = 249/283 (87.99%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVS+LATEREI+EFFSFSGEIEHIEIQCEQGES+TAFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAACLTPTENNFPN 120
           LLLSGATIVD+ VSI+P ENHVPRRE+Q             +RV DNAACLTPTENN P+
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREIQ------------EVRVADNAACLTPTENNSPS 120

Query: 121 TEQ-------WKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSF 180
            E         KMYVNRAQEVVA VLAKGS IGQDAMNKAKAFDEKH+LTASASAKVLSF
Sbjct: 121 REDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSF 180

Query: 181 DRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTA 240
           DRRVGLTEKLTVGISVVNEKVKSVDQ LHVSDKT AAIFAAERKL+DTGSAVKTSKYVTA
Sbjct: 181 DRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA 240

Query: 241 SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPVVA 276
           SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SKE PVVA
Sbjct: 241 SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of IVF0007582 vs. TAIR 10
Match: AT5G32450.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 334.3 bits (856), Expect = 9.0e-92
Identity = 185/276 (67.03%), Postives = 222/276 (80.43%), Query Frame = 0


Query: 5   TRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLS 64
           TR+VQV +VS+LATEREI+EFFSFSG+IEHIEIQ E G+SR AFVTF DPKALEIALLLS
Sbjct: 4   TRSVQVNNVSDLATEREIHEFFSFSGDIEHIEIQKEFGQSRIAFVTFTDPKALEIALLLS 63

Query: 65  GATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAACL------TPTENNF 124
           GATIVDQ V+I+  EN+V RRE Q             +R++DNA  L      T T+ N 
Sbjct: 64  GATIVDQIVTITRAENYVQRRETQ------------EVRMLDNAMPLGLQESTTQTKTNM 123

Query: 125 PNTEQWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVG 184
                 + YV++AQ+VVA VLAKGS +GQDA+NKAKAFDEKH+L A+ASAKV SFD+RVG
Sbjct: 124 DGNS--RAYVSKAQDVVATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVSSFDKRVG 183

Query: 185 LTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWL 244
           LTEKL+VGIS VNEKVKSVDQ L VSDKT AAIFAAERKL+DTGSAVK+S+YVTA AAW 
Sbjct: 184 LTEKLSVGISAVNEKVKSVDQKLQVSDKTMAAIFAAERKLNDTGSAVKSSRYVTAGAAWF 243

Query: 245 NGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESPV 275
           +GAF KVA+ GQ AG+KT+EKF+LA+SN++SK++P+
Sbjct: 244 SGAFSKVARVGQVAGSKTKEKFNLAVSNMSSKDTPI 265

[Close]

BLAST of IVF0007582 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 199.5 bits (506), Expect = 3.5e-51
Identity = 110/268 (41.04%), Postives = 171/268 (63.81%), Query Frame = 0


Query: 7   TVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGA 66
           TV+V +VS  ATER++ EFFSFSG+I ++E Q E   S+ A+VTF+D +  E A+LL+G+
Sbjct: 5   TVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVLLTGS 64

Query: 67  TIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAACLTPTENNFPNTEQWKM 126
           TIVD +V+++   ++                  LP   + +   L  +  +   T +   
Sbjct: 65  TIVDSSVTVTMSPDY-----------------QLPPDALASIESLKESNKSSSPTREDVS 124

Query: 127 YVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVG 186
              +A++VV+ +++KG V+G+DA+ KAK+ DEKH+LT++ASA+V SFD+R+G TEK+  G
Sbjct: 125 VFRKAEDVVSGMISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTG 184

Query: 187 ISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVA 246
            +VV+EKVK VDQ   V++KT++AI AAE+ +S+ GSA+  ++YV   A W+ GAF +V+
Sbjct: 185 TTVVSEKVKEVDQKFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVS 244

Query: 247 KAGQAAGTKTREKFHLAMSNLTSKESPV 275
           KA +  G K +EK  LA      K+  V
Sbjct: 245 KAAEEVGQKAKEKVGLAEEEEEEKKKVV 255

[Close]

BLAST of IVF0007582 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 197.6 bits (501), Expect = 1.3e-50
Identity = 112/257 (43.58%), Postives = 169/257 (65.76%), Query Frame = 0


Query: 7   TVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIALLLSGA 66
           TV+V +VS  AT+R++ EFFSFSG+I ++E Q E   ++ A+VTF+D +  E A+LLSGA
Sbjct: 5   TVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVLLSGA 64

Query: 67  TIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAACLTPTENNFPNTEQWKM 126
           TIVD +V +S   +                +Q  P    +  A L P ++N  + +    
Sbjct: 65  TIVDSSVIVSMAPD----------------YQLSP----EALASLEPKDSN-KSPKAGDS 124

Query: 127 YVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVG 186
            + +A++VV+++LAKG ++G+DA+ KAK+ DEKH+LT++ASAKV SFD+++G T+K+  G
Sbjct: 125 VLRKAEDVVSSMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTG 184

Query: 187 ISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVA 246
             VV EKV+ VDQ   VS+KT++AI AAE+ +S+ GSA+  ++YV   A W+ GAF KVA
Sbjct: 185 TVVVGEKVREVDQKYQVSEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVA 240

Query: 247 KAGQAAGTKTREKFHLA 264
           KA +  G K +EK  +A
Sbjct: 245 KAAEEVGQKAKEKVGMA 240

[Close]

BLAST of IVF0007582 vs. TAIR 10
Match: AT5G16840.2 (binding partner of acd11 1 )

HSP 1 Score: 189.5 bits (480), Expect = 3.6e-48
Identity = 110/259 (42.47%), Postives = 165/259 (63.71%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60
           M SQ R+V+V ++S+ ATE +I EFFSFSGE+E I+IQ       +A+VTF++ +  E A
Sbjct: 1   MASQVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQ--SSNEHSAYVTFKETQGAETA 60

Query: 61  LLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAACLTPTENNFPN 120
           +LLSGA+I DQ+V I    N+ P                        AA    T+++   
Sbjct: 61  VLLSGASIADQSVIIELAPNYSP-----------------------PAAPHAETQSSGAE 120

Query: 121 TEQWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLT 180
           +      V +A++VV+++LAKG ++G+DA+ KAKAFDEKH  T++A+A V S D+++GL+
Sbjct: 121 S-----VVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLS 180

Query: 181 EKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNG 240
           +KLT G S+VNEK+K+VDQN  V+++T++   AAE+ +S  GSAV  ++YV    +W  G
Sbjct: 181 QKLTAGTSLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAG 229

Query: 241 AFGKVAKAGQAAGTKTREK 260
           AF +VA+A    G KT+EK
Sbjct: 241 AFNRVAQAAGEVGQKTKEK 229

[Close]

BLAST of IVF0007582 vs. TAIR 10
Match: AT5G16840.1 (binding partner of acd11 1 )

HSP 1 Score: 189.1 bits (479), Expect = 4.7e-48
Identity = 110/259 (42.47%), Postives = 166/259 (64.09%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60
           M SQ R+V+V ++S+ ATE +I EFFSFSGE+E I+IQ  +    +A+VTF++ +  E A
Sbjct: 1   MASQVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNE---HSAYVTFKETQGAETA 60

Query: 61  LLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAACLTPTENNFPN 120
           +LLSGA+I DQ+V I    N+ P                        AA    T+++   
Sbjct: 61  VLLSGASIADQSVIIELAPNYSP-----------------------PAAPHAETQSSGAE 120

Query: 121 TEQWKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLT 180
           +      V +A++VV+++LAKG ++G+DA+ KAKAFDEKH  T++A+A V S D+++GL+
Sbjct: 121 S-----VVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLS 180

Query: 181 EKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNG 240
           +KLT G S+VNEK+K+VDQN  V+++T++   AAE+ +S  GSAV  ++YV    +W  G
Sbjct: 181 QKLTAGTSLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAG 228

Query: 241 AFGKVAKAGQAAGTKTREK 260
           AF +VA+A    G KT+EK
Sbjct: 241 AFNRVAQAAGEVGQKTKEK 228

The following BLAST results are available for this feature:

BLAST of IVF0007582 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	6.6e-47	42.47	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]
P87216	2.8e-05	21.34	Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN...	[more]

BLAST of IVF0007582 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V2T9	1.3e-138	96.75	Binding partner of ACD11 1-like isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3B5B6	3.8e-130	91.52	binding partner of ACD11 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034859...	[more]
A0A0A0LNE8	7.9e-120	84.81	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G431170 PE=4 SV...	[more]
A0A5D3BPG7	2.3e-119	84.45	Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CIA3	2.3e-119	84.45	binding partner of ACD11 1-like OS=Cucumis melo OX=3656 GN=LOC103501087 PE=4 SV=...	[more]

BLAST of IVF0007582 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060089.1	8.32e-178	96.75	binding partner of ACD11 1-like isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008441995.1	1.01e-166	91.52	PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo]	[more]
XP_038881171.1	1.49e-155	86.22	binding partner of ACD11 1-like isoform X2 [Benincasa hispida]	[more]
XP_004151849.1	4.08e-153	84.81	binding partner of ACD11 1 [Cucumis sativus]	[more]
XP_008462804.1	1.66e-152	84.45	PREDICTED: binding partner of ACD11 1-like [Cucumis melo] >KAA0066322.1 binding ...	[more]

BLAST of IVF0007582 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G32450.1	9.0e-92	67.03	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	3.5e-51	41.04	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G17720.1	1.3e-50	43.58	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G16840.2	3.6e-48	42.47	binding partner of acd11 1	[more]
AT5G16840.1	4.7e-48	42.47	binding partner of acd11 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 7..76 e-value: 2.7E-6 score: 36.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 10..71 e-value: 3.8E-6 score: 26.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..80 score: 10.121413
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..76 e-value: 2.2E-9 score: 39.1
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 3..273
None	No IPR available	PANTHER	PTHR32343:SF61	RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN-RELATED	coord: 3..273
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0007582.2	IVF0007582.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding