IVF0007564 (gene) Melon (IVF77) v1

Overview


Name	IVF0007564
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein MNN4-like
Location	chr08: 15124547 .. 15124849 (+)
RNA-Seq Expression	IVF0007564
Synteny	IVF0007564

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAACAAAGCCTCAAGCCTCCCTACAATCCCAAGAATTCAAACCCATAAAATCCAAATCGCCACGACCCATCACTGACCTGACCACCACTTCCTCGCCCAGGCACAAATCTAATAAGGATCGTGCCCTTCTTTTGATTGAGTCAACTGGAACCTCCTTATCGCATCAAGAGGAAACTCCTCAACCTTTTGATGCAATCCCTCCCAACCAAACCAAATCACCTAGCCCTGAAACTTTGAATTATAATGTCTTCCACGAAACCTCCTCTGACCCAGCAACATTGTTGGATAATGCGACTTAG

mRNA sequence

ATGCCAACAAAGCCTCAAGCCTCCCTACAATCCCAAGAATTCAAACCCATAAAATCCAAATCGCCACGACCCATCACTGACCTGACCACCACTTCCTCGCCCAGGCACAAATCTAATAAGGATCGTGCCCTTCTTTTGATTGAGTCAACTGGAACCTCCTTATCGCATCAAGAGGAAACTCCTCAACCTTTTGATGCAATCCCTCCCAACCAAACCAAATCACCTAGCCCTGAAACTTTGAATTATAATGTCTTCCACGAAACCTCCTCTGACCCAGCAACATTGTTGGATAATGCGACTTAG

Coding sequence (CDS)

ATGCCAACAAAGCCTCAAGCCTCCCTACAATCCCAAGAATTCAAACCCATAAAATCCAAATCGCCACGACCCATCACTGACCTGACCACCACTTCCTCGCCCAGGCACAAATCTAATAAGGATCGTGCCCTTCTTTTGATTGAGTCAACTGGAACCTCCTTATCGCATCAAGAGGAAACTCCTCAACCTTTTGATGCAATCCCTCCCAACCAAACCAAATCACCTAGCCCTGAAACTTTGAATTATAATGTCTTCCACGAAACCTCCTCTGACCCAGCAACATTGTTGGATAATGCGACTTAG

Protein sequence

MPTKPQASLQSQEFKPIKSKSPRPITDLTTTSSPRHKSNKDRALLLIESTGTSLSHQEETPQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT

Homology

[Close]

BLAST of IVF0007564 vs. ExPASy TrEMBL
Match: A0A5D3CQE3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold513G00050 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.6e-46
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MPTKPQASLQSQEFKPIKSKSPRPITDLTTTSSPRHKSNKDRALLLIESTGTSLSHQEET 60
           MPTKPQASLQSQEFKPIKSKSPRPITDLTTTSSPRHKSNKDRALLLIESTGTSLSHQEET
Sbjct: 1   MPTKPQASLQSQEFKPIKSKSPRPITDLTTTSSPRHKSNKDRALLLIESTGTSLSHQEET 60

Query: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 101
           PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT
Sbjct: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 100

[Close]

BLAST of IVF0007564 vs. ExPASy TrEMBL
Match: A0A5A7UJT2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold697G00110 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.4e-42
Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MPTKPQASLQSQEFKPIKSKSPRPITDLTTTSSPRHKSNKDRALLLIESTGTSLSHQEET 60
           MPT PQASLQSQE KPIKSKSPRPITDLTTTSSPRH+SNKD AL+LIESTGTSLS QEET
Sbjct: 1   MPTNPQASLQSQESKPIKSKSPRPITDLTTTSSPRHESNKDLALILIESTGTSLSRQEET 60

Query: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 101
           PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT
Sbjct: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 100

[Close]

BLAST of IVF0007564 vs. ExPASy TrEMBL
Match: A0A5A7TBR6 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G001140 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.4e-26
Identity = 70/99 (70.71%), Postives = 78/99 (78.79%), Query Frame = 0


Query: 2   PTKPQASLQSQEFKPIKSKSPRPITDLTTTSSPRHKSNKDRALLLIESTGTSLSHQEETP 61
           PTKPQA  QSQ+ K  KSKSP  I DLTTTSSPRH+++KDRAL+L ES  TS  HQE+TP
Sbjct: 232 PTKPQACPQSQKSKTTKSKSPPLINDLTTTSSPRHETDKDRALVLFESIKTSFLHQEKTP 291

Query: 62  QPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 101
           QP DAIP NQTK PSP+T N +VFHETS DP TLLD AT
Sbjct: 292 QPLDAIPINQTKLPSPKTSNQDVFHETSFDPTTLLDEAT 330

[Close]

BLAST of IVF0007564 vs. ExPASy TrEMBL
Match: E5GCD9 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.2e-22
Identity = 65/100 (65.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 1   MPTKPQASLQSQEFKPIKSKSPRPITDLTTTSSPRHKSNKDRALLLIESTGTSLSHQEET 60
           MPT  + S QSQ+ KP KSKSP PI  LTTTSSP+HK+NK   L+L    GTSL  QEET
Sbjct: 1   MPTTSRVSPQSQKSKPTKSKSPPPIEKLTTTSSPKHKTNKKCVLILFYLAGTSLPCQEET 60

Query: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 101
           PQP DAIP NQ K PSPET N +VFHET   P TLLD+AT
Sbjct: 61  PQPLDAIPINQAKPPSPETSNQDVFHETFYVPTTLLDDAT 100

[Close]

BLAST of IVF0007564 vs. ExPASy TrEMBL
Match: A0A5A7VIC3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold595G00540 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 8.0e-22
Identity = 64/100 (64.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 1   MPTKPQASLQSQEFKPIKSKSPRPITDLTTTSSPRHKSNKDRALLLIESTGTSLSHQEET 60
           MPT  + S QSQ+ KP KSKSP PI  LTTTSSP+ K+NK+  L+L    GTSL  QEET
Sbjct: 1   MPTTSRVSPQSQKSKPTKSKSPPPIEKLTTTSSPKDKTNKNCVLILFYLAGTSLPCQEET 60

Query: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 101
           PQP DAIP NQ K PSPET N +VFHET   P TLLD+AT
Sbjct: 61  PQPLDAIPINQAKPPSPETSNQDVFHETFYVPTTLLDDAT 100

[Close]

BLAST of IVF0007564 vs. NCBI nr
Match: TYK14137.1 (hypothetical protein E5676_scaffold513G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 197 bits (502), Expect = 1.18e-63
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MPTKPQASLQSQEFKPIKSKSPRPITDLTTTSSPRHKSNKDRALLLIESTGTSLSHQEET 60
           MPTKPQASLQSQEFKPIKSKSPRPITDLTTTSSPRHKSNKDRALLLIESTGTSLSHQEET
Sbjct: 1   MPTKPQASLQSQEFKPIKSKSPRPITDLTTTSSPRHKSNKDRALLLIESTGTSLSHQEET 60

Query: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 100
           PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT
Sbjct: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 100

[Close]

BLAST of IVF0007564 vs. NCBI nr
Match: KAA0056132.1 (hypothetical protein E6C27_scaffold697G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 184 bits (468), Expect = 1.82e-58
Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MPTKPQASLQSQEFKPIKSKSPRPITDLTTTSSPRHKSNKDRALLLIESTGTSLSHQEET 60
           MPT PQASLQSQE KPIKSKSPRPITDLTTTSSPRH+SNKD AL+LIESTGTSLS QEET
Sbjct: 1   MPTNPQASLQSQESKPIKSKSPRPITDLTTTSSPRHESNKDLALILIESTGTSLSRQEET 60

Query: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 100
           PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT
Sbjct: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 100

[Close]

BLAST of IVF0007564 vs. NCBI nr
Match: KAA0039027.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 131 bits (330), Expect = 1.36e-34
Identity = 70/99 (70.71%), Postives = 78/99 (78.79%), Query Frame = 0


Query: 2   PTKPQASLQSQEFKPIKSKSPRPITDLTTTSSPRHKSNKDRALLLIESTGTSLSHQEETP 61
           PTKPQA  QSQ+ K  KSKSP  I DLTTTSSPRH+++KDRAL+L ES  TS  HQE+TP
Sbjct: 232 PTKPQACPQSQKSKTTKSKSPPLINDLTTTSSPRHETDKDRALVLFESIKTSFLHQEKTP 291

Query: 62  QPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 100
           QP DAIP NQTK PSP+T N +VFHETS DP TLLD AT
Sbjct: 292 QPLDAIPINQTKLPSPKTSNQDVFHETSFDPTTLLDEAT 330

[Close]

BLAST of IVF0007564 vs. NCBI nr
Match: ADN34138.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 118 bits (296), Expect = 1.16e-31
Identity = 65/100 (65.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 1   MPTKPQASLQSQEFKPIKSKSPRPITDLTTTSSPRHKSNKDRALLLIESTGTSLSHQEET 60
           MPT  + S QSQ+ KP KSKSP PI  LTTTSSP+HK+NK   L+L    GTSL  QEET
Sbjct: 1   MPTTSRVSPQSQKSKPTKSKSPPPIEKLTTTSSPKHKTNKKCVLILFYLAGTSLPCQEET 60

Query: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 100
           PQP DAIP NQ K PSPET N +VFHET   P TLLD+AT
Sbjct: 61  PQPLDAIPINQAKPPSPETSNQDVFHETFYVPTTLLDDAT 100

[Close]

BLAST of IVF0007564 vs. NCBI nr
Match: KAA0066950.1 (hypothetical protein E6C27_scaffold550G00860 [Cucumis melo var. makuwa] >TYK30231.1 hypothetical protein E5676_scaffold595G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 115 bits (289), Expect = 1.34e-30
Identity = 64/100 (64.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 1   MPTKPQASLQSQEFKPIKSKSPRPITDLTTTSSPRHKSNKDRALLLIESTGTSLSHQEET 60
           MPT  + S QSQ+ KP KSKSP PI  LTTTSSP+ K+NK+  L+L    GTSL  QEET
Sbjct: 1   MPTTSRVSPQSQKSKPTKSKSPPPIEKLTTTSSPKDKTNKNCVLILFYLAGTSLPCQEET 60

Query: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 100
           PQP DAIP NQ K PSPET N +VFHET   P TLLD+AT
Sbjct: 61  PQPLDAIPINQAKPPSPETSNQDVFHETFYVPTTLLDDAT 100

The following BLAST results are available for this feature:

BLAST of IVF0007564 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0007564 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CQE3	1.6e-46	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UJT2	1.4e-42	94.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TBR6	1.4e-26	70.71	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G001...	[more]
E5GCD9	1.2e-22	65.00	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5A7VIC3	8.0e-22	64.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of IVF0007564 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK14137.1	1.18e-63	100.00	hypothetical protein E5676_scaffold513G00050 [Cucumis melo var. makuwa]	[more]
KAA0056132.1	1.82e-58	94.00	hypothetical protein E6C27_scaffold697G00110 [Cucumis melo var. makuwa]	[more]
KAA0039027.1	1.36e-34	70.71	protein MNN4-like [Cucumis melo var. makuwa]	[more]
ADN34138.1	1.16e-31	65.00	hypothetical protein [Cucumis melo subsp. melo]	[more]
KAA0066950.1	1.34e-30	64.00	hypothetical protein E6C27_scaffold550G00860 [Cucumis melo var. makuwa] >TYK3023...	[more]

BLAST of IVF0007564 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0007564.1	IVF0007564.1	mRNA