IVF0007528 (gene) Melon (IVF77) v1

Overview


Name	IVF0007528
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Retrotrans_gag domain-containing protein
Location	chr07: 8672163 .. 8672876 (+)
RNA-Seq Expression	IVF0007528
Synteny	IVF0007528

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCACGAAGTAAGTTAAGGAGATTAAGACAAACGGGTGGCATTCCTGAGTATATAAAGGAGTTCACTACTCTAATGTTGAAAACAGAATATCTATCAGACAAGGATGCCCTCTTTCATTTTAGAGACGATCTTAAAGATTGGGCAAAAATTGAGCTCGATAGGCGCAACATACAAACTCTTGATGATGCTATTGCTACTGTCAAATTGCTCATTAACTTGTCCTTCAAGGAGAAGAAGACCTGTATAGATGAAGGAGATAGATCCGAGGCGAAGAAAGATGGGAACTCTAAACAAGGTGGGAAGAATGGAAAGGCCTTGTTTGCCAACAAAGGTACAACTCCTGAACCTTGTTTCTTATGTAATGGTCCACATTGGGCGAGAGATTGCCCAAAGAAGAACAAGTTGAGTGCAATGGTGGCCAATCCATATGATGAAGAGGAGGCACCCATGAAAGGGTCGGCACAGTTAAGTGCAATTCGATACCTAAGCCCCATGGAGAATGATTTCTCTAAAGAACCTCAGAACGGAGGTTGGTTGTACGTGGACACCATGCTCAACAGCAAGGTTGCTTTAACAATACTAGACACATGCACAATTGAAAATGTGATGGATCCTGAAGAGGCAAAGCAGCTAGGCCTCAGGATAACGAGGAGGAGCGACACTGAGATAAAGATCATTAGTGCCAAACCAATGAGGAATACTGGATGA

mRNA sequence

ATGGAGGCACGAAGTAAGTTAAGGAGATTAAGACAAACGGGTGGCATTCCTGAGTATATAAAGGAGTTCACTACTCTAATGTTGAAAACAGAATATCTATCAGACAAGGATGCCCTCTTTCATTTTAGAGACGATCTTAAAGATTGGGCAAAAATTGAGCTCGATAGGCGCAACATACAAACTCTTGATGATGCTATTGCTACTGTCAAATTGCTCATTAACTTGTCCTTCAAGGAGAAGAAGACCTGTATAGATGAAGGAGATAGATCCGAGGCGAAGAAAGATGGGAACTCTAAACAAGGTGGGAAGAATGGAAAGGCCTTGTTTGCCAACAAAGGTACAACTCCTGAACCTTGTTTCTTATGTAATGGTCCACATTGGGCGAGAGATTGCCCAAAGAAGAACAAGTTGAGTGCAATGGTGGCCAATCCATATGATGAAGAGGAGGCACCCATGAAAGGGTCGGCACAGTTAAGTGCAATTCGATACCTAAGCCCCATGGAGAATGATTTCTCTAAAGAACCTCAGAACGGAGGTTGGTTGTACGTGGACACCATGCTCAACAGCAAGGTTGCTTTAACAATACTAGACACATGCACAATTGAAAATGTGATGGATCCTGAAGAGGCAAAGCAGCTAGGCCTCAGGATAACGAGGAGGAGCGACACTGAGATAAAGATCATTAGTGCCAAACCAATGAGGAATACTGGATGA

Coding sequence (CDS)

ATGGAGGCACGAAGTAAGTTAAGGAGATTAAGACAAACGGGTGGCATTCCTGAGTATATAAAGGAGTTCACTACTCTAATGTTGAAAACAGAATATCTATCAGACAAGGATGCCCTCTTTCATTTTAGAGACGATCTTAAAGATTGGGCAAAAATTGAGCTCGATAGGCGCAACATACAAACTCTTGATGATGCTATTGCTACTGTCAAATTGCTCATTAACTTGTCCTTCAAGGAGAAGAAGACCTGTATAGATGAAGGAGATAGATCCGAGGCGAAGAAAGATGGGAACTCTAAACAAGGTGGGAAGAATGGAAAGGCCTTGTTTGCCAACAAAGGTACAACTCCTGAACCTTGTTTCTTATGTAATGGTCCACATTGGGCGAGAGATTGCCCAAAGAAGAACAAGTTGAGTGCAATGGTGGCCAATCCATATGATGAAGAGGAGGCACCCATGAAAGGGTCGGCACAGTTAAGTGCAATTCGATACCTAAGCCCCATGGAGAATGATTTCTCTAAAGAACCTCAGAACGGAGGTTGGTTGTACGTGGACACCATGCTCAACAGCAAGGTTGCTTTAACAATACTAGACACATGCACAATTGAAAATGTGATGGATCCTGAAGAGGCAAAGCAGCTAGGCCTCAGGATAACGAGGAGGAGCGACACTGAGATAAAGATCATTAGTGCCAAACCAATGAGGAATACTGGATGA

Protein sequence

MEARSKLRRLRQTGGIPEYIKEFTTLMLKTEYLSDKDALFHFRDDLKDWAKIELDRRNIQTLDDAIATVKLLINLSFKEKKTCIDEGDRSEAKKDGNSKQGGKNGKALFANKGTTPEPCFLCNGPHWARDCPKKNKLSAMVANPYDEEEAPMKGSAQLSAIRYLSPMENDFSKEPQNGGWLYVDTMLNSKVALTILDTCTIENVMDPEEAKQLGLRITRRSDTEIKIISAKPMRNTG

Homology

[Close]

BLAST of IVF0007528 vs. ExPASy TrEMBL
Match: A0A5D3BUR0 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00660 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.3e-131
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MEARSKLRRLRQTGGIPEYIKEFTTLMLKTEYLSDKDALFHFRDDLKDWAKIELDRRNIQ 60
           MEARSKLRRLRQTGGIPEYIKEFTTLMLKTEYLSDKDALFHFRDDLKDWAKIELDRRNIQ
Sbjct: 154 MEARSKLRRLRQTGGIPEYIKEFTTLMLKTEYLSDKDALFHFRDDLKDWAKIELDRRNIQ 213

Query: 61  TLDDAIATVKLLINLSFKEKKTCIDEGDRSEAKKDGNSKQGGKNGKALFANKGTTPEPCF 120
           TLDDAIATVKLLINLSFKEKKTCIDEGDRSEAKKDGNSKQGGKNGKALFANKGTTPEPCF
Sbjct: 214 TLDDAIATVKLLINLSFKEKKTCIDEGDRSEAKKDGNSKQGGKNGKALFANKGTTPEPCF 273

Query: 121 LCNGPHWARDCPKKNKLSAMVANPYDEEEAPMKGSAQLSAIRYLSPMENDFSKEPQNGGW 180
           LCNGPHWARDCPKKNKLSAMVANPYDEEEAPMKGSAQLSAIRYLSPMENDFSKEPQNGGW
Sbjct: 274 LCNGPHWARDCPKKNKLSAMVANPYDEEEAPMKGSAQLSAIRYLSPMENDFSKEPQNGGW 333

Query: 181 LYVDTMLNSKVALTILDTCTIENVMDPEEAKQLGLRITRRSDTEIKIISAKPMRNTG 238
           LYVDTMLNSKVALTILDTCTIENVMDPEEAKQLGLRITRRSDTEIKIISAKPMRNTG
Sbjct: 334 LYVDTMLNSKVALTILDTCTIENVMDPEEAKQLGLRITRRSDTEIKIISAKPMRNTG 390

[Close]

BLAST of IVF0007528 vs. ExPASy TrEMBL
Match: A0A5A7T2W8 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00550 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 9.6e-90
Identity = 171/237 (72.15%), Postives = 191/237 (80.59%), Query Frame = 0


Query: 1   MEARSKLRRLRQTGGIPEYIKEFTTLMLKTEYLSDKDALFHFRDDLKDWAKIELDRRNIQ 60
           MEAR KLRRLRQ G IP+YIKEFTTLML+ E LSDKDALFHFRDDLKDWAKIELDRRN++
Sbjct: 180 MEARGKLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDDLKDWAKIELDRRNVR 239

Query: 61  TLDDAIATVKLLINLSFKEKKTCIDEGDRSEAKKDGNSKQGGKNGKALFANKGTTPEPCF 120
           TLDDAIA    LI++  KEKK  +DEG+  E KK+GNSKQ GK GKA FANK T P  CF
Sbjct: 240 TLDDAIAAAGALIDIYSKEKKRRVDEGEAFEPKKEGNSKQDGKYGKAPFANKDTIPPTCF 299

Query: 121 LCNGPHWARDCPKKNKLSAMVANPYDEEEAPMKGSAQLSAIRYLSPMENDFSKEPQNGGW 180
           LC GPHW RDCPKKNKLSA+VANP +EEE P+KG+AQL  IRYLS M+++ SKEPQ GG 
Sbjct: 300 LCKGPHWTRDCPKKNKLSAIVANPREEEEVPIKGTAQLGGIRYLSAMKSESSKEPQEGGL 359

Query: 181 LYVDTMLNSKVALTILDTCTIENVMDPEEAKQLGLRITRRSDTEIKIISAKPMRNTG 238
           LYVD   N+K AL +LD     NVMDPEEAK+LGLR TRRSDTEIKIISAK M+N G
Sbjct: 360 LYVDATFNNKAALAMLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIG 416

[Close]

BLAST of IVF0007528 vs. ExPASy TrEMBL
Match: A0A5A7SY30 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00560 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 1.1e-74
Identity = 146/210 (69.52%), Postives = 167/210 (79.52%), Query Frame = 0


Query: 1   MEARSKLRRLRQTGGIPEYIKEFTTLMLKTEYLSDKDALFHFRDDLKDWAKIELDRRNIQ 60
           MEAR KLRRLRQ G IP+YIKEFTTLML+ E LSDKDALFHFRD LKDWAKIELDRRN++
Sbjct: 180 MEARGKLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDGLKDWAKIELDRRNVR 239

Query: 61  TLDDAIATVKLLINLSFKEKKTCIDEGDRSEAKKDGNSKQGGKNGKALFANKGTTPEPCF 120
           TLDDAIA  K LI++ FKEKKT +DEG+  E  K+ NSKQ  K GK  FAN+ TTP  CF
Sbjct: 240 TLDDAIAAAKALIDIYFKEKKTRVDEGEAFE-PKEWNSKQDEKYGKTPFANRDTTPPTCF 299

Query: 121 LCNGPHWARDCPKKNKLSAMVANPYDEEEAPMKGSAQLSAIRYLSPMENDFSKEPQNGGW 180
           LC GPH  R+CPK+NKLSA+VANP +EEE P+KG+AQL AIRYLS M++D SKEPQ GGW
Sbjct: 300 LCKGPHRTRECPKRNKLSAIVANPREEEEVPIKGTAQLGAIRYLSAMKSDSSKEPQEGGW 359

Query: 181 LYVDTMLNSKVALTILDTCTIENVMDPEEA 211
           LYVD   N+K AL +LD     NVM+PEEA
Sbjct: 360 LYVDATFNNKAALAMLDAGATHNVMNPEEA 388

[Close]

BLAST of IVF0007528 vs. ExPASy TrEMBL
Match: A0A5A7TAA5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold35G00340 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 9.7e-42
Identity = 106/244 (43.44%), Postives = 150/244 (61.48%), Query Frame = 0


Query: 1   MEARSKLRRLRQTGGIPEYIKEFTTLMLKTEYLSDKDALFHFRDDLKDWAKIELDRRNIQ 60
           +E+R KLRRLR TG I +Y+KEFTTLML+   L +K+ALF F+D LKDWAKIELDRRN+Q
Sbjct: 249 IESRGKLRRLRHTGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQ 308

Query: 61  TLDDAIATVKLLINLS--FKEKKTCIDE-GDRSEAKKDGNSKQGG-------KNGKALFA 120
           TLDDAIA  + L++ S   K KK   ++ G + +  K+   K GG       KNGK   A
Sbjct: 309 TLDDAIAAAETLVDYSAQSKGKKPGPEKYGGKPDKTKNFGRKDGGKVKMFQWKNGKNDGA 368

Query: 121 NKGTT---PEPCFLCNGPHWARDCPKKNKLSAMVANPYDEEEAPMKGSAQLSAIRYLSPM 180
           ++G +   P+PCF+C GPHW RDCP +  L+A+V      ++       Q+ +++ +  M
Sbjct: 369 HRGESSNPPKPCFICKGPHWTRDCPNRKALNALVTKFQKVKQVEDAPGPQIGSMQQIGVM 428

Query: 181 ENDFSKEPQNGGWLYVDTMLNSKVALTILDTCTIENVMDPEEAKQLGLRITRRSDTEIKI 232
           + D + E  + G LY    +  K A T+ DT    N MD +EAK+LGL+    + T IK+
Sbjct: 429 KKDTTVE--HKGLLYGSIRIEGKEATTMFDTGASHNFMDVQEAKRLGLKFKEETGT-IKV 488

[Close]

BLAST of IVF0007528 vs. ExPASy TrEMBL
Match: A0A5A7VEX8 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00510 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.3e-41
Identity = 105/244 (43.03%), Postives = 152/244 (62.30%), Query Frame = 0


Query: 1   MEARSKLRRLRQTGGIPEYIKEFTTLMLKTEYLSDKDALFHFRDDLKDWAKIELDRRNIQ 60
           +E+R KLRRLR TG I EY+KEFTTLML+   L +K+ALF F+D LKDWAKIELDRRN+Q
Sbjct: 249 IESRGKLRRLRHTGSILEYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQ 308

Query: 61  TLDDAIATVKLLINLS--FKEKKTCIDE-GDRSEAKKDGNSKQGG-------KNGKALFA 120
           TLDDAIA  + L++ S   K KK   ++ G +S+  K+   + GG       KNGK   A
Sbjct: 309 TLDDAIAAAETLVDYSAQSKGKKPGPEKYGGKSDKTKNFGRRDGGKVKTFQWKNGKNDGA 368

Query: 121 NKGTT---PEPCFLCNGPHWARDCPKKNKLSAMVANPYDEEEAPMKGSAQLSAIRYLSPM 180
           ++G +   P+PCF+C GPHW RDCP +  L+A+VA   + ++       Q+ +++ +  M
Sbjct: 369 HRGESSNPPKPCFICKGPHWTRDCPNQKALNALVAKFQEIKQVEDAPGPQIGSMQQIGVM 428

Query: 181 ENDFSKEPQNGGWLYVDTMLNSKVALTILDTCTIENVMDPEEAKQLGLRITRRSDTEIKI 232
           + + + E  + G LY    +  K A  + DT    N MD +EAK+LGL+    + T +K+
Sbjct: 429 KKETTVE--HKGLLYGSIRIEGKEATAMFDTGASHNFMDVQEAKRLGLKYKEETGT-VKV 488

[Close]

BLAST of IVF0007528 vs. NCBI nr
Match: KAA0064169.1 (uncharacterized protein E6C27_scaffold548G00940 [Cucumis melo var. makuwa] >TYK02860.1 uncharacterized protein E5676_scaffold218G00660 [Cucumis melo var. makuwa])

HSP 1 Score: 479 bits (1233), Expect = 3.04e-168
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MEARSKLRRLRQTGGIPEYIKEFTTLMLKTEYLSDKDALFHFRDDLKDWAKIELDRRNIQ 60
           MEARSKLRRLRQTGGIPEYIKEFTTLMLKTEYLSDKDALFHFRDDLKDWAKIELDRRNIQ
Sbjct: 154 MEARSKLRRLRQTGGIPEYIKEFTTLMLKTEYLSDKDALFHFRDDLKDWAKIELDRRNIQ 213

Query: 61  TLDDAIATVKLLINLSFKEKKTCIDEGDRSEAKKDGNSKQGGKNGKALFANKGTTPEPCF 120
           TLDDAIATVKLLINLSFKEKKTCIDEGDRSEAKKDGNSKQGGKNGKALFANKGTTPEPCF
Sbjct: 214 TLDDAIATVKLLINLSFKEKKTCIDEGDRSEAKKDGNSKQGGKNGKALFANKGTTPEPCF 273

Query: 121 LCNGPHWARDCPKKNKLSAMVANPYDEEEAPMKGSAQLSAIRYLSPMENDFSKEPQNGGW 180
           LCNGPHWARDCPKKNKLSAMVANPYDEEEAPMKGSAQLSAIRYLSPMENDFSKEPQNGGW
Sbjct: 274 LCNGPHWARDCPKKNKLSAMVANPYDEEEAPMKGSAQLSAIRYLSPMENDFSKEPQNGGW 333

Query: 181 LYVDTMLNSKVALTILDTCTIENVMDPEEAKQLGLRITRRSDTEIKIISAKPMRNTG 237
           LYVDTMLNSKVALTILDTCTIENVMDPEEAKQLGLRITRRSDTEIKIISAKPMRNTG
Sbjct: 334 LYVDTMLNSKVALTILDTCTIENVMDPEEAKQLGLRITRRSDTEIKIISAKPMRNTG 390

[Close]

BLAST of IVF0007528 vs. NCBI nr
Match: KAA0035961.1 (uncharacterized protein E6C27_scaffold56G001660 [Cucumis melo var. makuwa] >TYK30442.1 uncharacterized protein E5676_scaffold349G00550 [Cucumis melo var. makuwa])

HSP 1 Score: 340 bits (872), Expect = 1.83e-112
Identity = 171/237 (72.15%), Postives = 191/237 (80.59%), Query Frame = 0


Query: 1   MEARSKLRRLRQTGGIPEYIKEFTTLMLKTEYLSDKDALFHFRDDLKDWAKIELDRRNIQ 60
           MEAR KLRRLRQ G IP+YIKEFTTLML+ E LSDKDALFHFRDDLKDWAKIELDRRN++
Sbjct: 180 MEARGKLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDDLKDWAKIELDRRNVR 239

Query: 61  TLDDAIATVKLLINLSFKEKKTCIDEGDRSEAKKDGNSKQGGKNGKALFANKGTTPEPCF 120
           TLDDAIA    LI++  KEKK  +DEG+  E KK+GNSKQ GK GKA FANK T P  CF
Sbjct: 240 TLDDAIAAAGALIDIYSKEKKRRVDEGEAFEPKKEGNSKQDGKYGKAPFANKDTIPPTCF 299

Query: 121 LCNGPHWARDCPKKNKLSAMVANPYDEEEAPMKGSAQLSAIRYLSPMENDFSKEPQNGGW 180
           LC GPHW RDCPKKNKLSA+VANP +EEE P+KG+AQL  IRYLS M+++ SKEPQ GG 
Sbjct: 300 LCKGPHWTRDCPKKNKLSAIVANPREEEEVPIKGTAQLGGIRYLSAMKSESSKEPQEGGL 359

Query: 181 LYVDTMLNSKVALTILDTCTIENVMDPEEAKQLGLRITRRSDTEIKIISAKPMRNTG 237
           LYVD   N+K AL +LD     NVMDPEEAK+LGLR TRRSDTEIKIISAK M+N G
Sbjct: 360 LYVDATFNNKAALAMLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIG 416

[Close]

BLAST of IVF0007528 vs. NCBI nr
Match: KAA0035960.1 (uncharacterized protein E6C27_scaffold56G001640 [Cucumis melo var. makuwa] >TYK30443.1 uncharacterized protein E5676_scaffold349G00560 [Cucumis melo var. makuwa])

HSP 1 Score: 290 bits (741), Expect = 1.46e-93
Identity = 146/210 (69.52%), Postives = 167/210 (79.52%), Query Frame = 0


Query: 1   MEARSKLRRLRQTGGIPEYIKEFTTLMLKTEYLSDKDALFHFRDDLKDWAKIELDRRNIQ 60
           MEAR KLRRLRQ G IP+YIKEFTTLML+ E LSDKDALFHFRD LKDWAKIELDRRN++
Sbjct: 180 MEARGKLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDGLKDWAKIELDRRNVR 239

Query: 61  TLDDAIATVKLLINLSFKEKKTCIDEGDRSEAKKDGNSKQGGKNGKALFANKGTTPEPCF 120
           TLDDAIA  K LI++ FKEKKT +DEG+  E K + NSKQ  K GK  FAN+ TTP  CF
Sbjct: 240 TLDDAIAAAKALIDIYFKEKKTRVDEGEAFEPK-EWNSKQDEKYGKTPFANRDTTPPTCF 299

Query: 121 LCNGPHWARDCPKKNKLSAMVANPYDEEEAPMKGSAQLSAIRYLSPMENDFSKEPQNGGW 180
           LC GPH  R+CPK+NKLSA+VANP +EEE P+KG+AQL AIRYLS M++D SKEPQ GGW
Sbjct: 300 LCKGPHRTRECPKRNKLSAIVANPREEEEVPIKGTAQLGAIRYLSAMKSDSSKEPQEGGW 359

Query: 181 LYVDTMLNSKVALTILDTCTIENVMDPEEA 210
           LYVD   N+K AL +LD     NVM+PEEA
Sbjct: 360 LYVDATFNNKAALAMLDAGATHNVMNPEEA 388

[Close]

BLAST of IVF0007528 vs. NCBI nr
Match: XP_008455798.1 (PREDICTED: uncharacterized protein LOC103495894 [Cucumis melo])

HSP 1 Score: 179 bits (455), Expect = 1.19e-48
Identity = 104/244 (42.62%), Postives = 151/244 (61.89%), Query Frame = 0


Query: 1   MEARSKLRRLRQTGGIPEYIKEFTTLMLKTEYLSDKDALFHFRDDLKDWAKIELDRRNIQ 60
           +E+R KLRRLR TG I +Y+KEFTTLML+   L +K+ALF F+D LKDWAKIELDRRN+Q
Sbjct: 160 IESRGKLRRLRHTGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQ 219

Query: 61  TLDDAIATVKLLINLSF--KEKKTCIDE-GDRSEAKKDGNSKQGGK-------NGKALFA 120
           TLDDAIA V+ L++ S   K KK   ++ G + +  K+   K GGK       NGK   A
Sbjct: 220 TLDDAIAAVETLVDYSAQSKGKKPGPEKHGGKPDKTKNFGRKDGGKVKTFQWKNGKNDGA 279

Query: 121 NKG---TTPEPCFLCNGPHWARDCPKKNKLSAMVANPYDEEEAPMKGSAQLSAIRYLSPM 180
           ++G     P+PCF+C GPHW RDCP +  L+A+VA   + ++       Q+ +++ +  M
Sbjct: 280 HRGECSNPPKPCFICKGPHWTRDCPNRKALNALVAKFQEVKQVEDAPGPQIGSMQQIGVM 339

Query: 181 ENDFSKEPQNGGWLYVDTMLNSKVALTILDTCTIENVMDPEEAKQLGLRITRRSDTEIKI 231
           + + + E +  G LY    +  K A+ + DT    N MD +EAK+LGL+    +   +K+
Sbjct: 340 KKETTVEHK--GLLYGSIRIEGKEAIAMFDTGVSHNFMDVQEAKRLGLKFKEETGI-VKV 399

[Close]

BLAST of IVF0007528 vs. NCBI nr
Match: KAA0040414.1 (uncharacterized protein E6C27_scaffold35G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 181 bits (458), Expect = 3.57e-48
Identity = 106/244 (43.44%), Postives = 150/244 (61.48%), Query Frame = 0


Query: 1   MEARSKLRRLRQTGGIPEYIKEFTTLMLKTEYLSDKDALFHFRDDLKDWAKIELDRRNIQ 60
           +E+R KLRRLR TG I +Y+KEFTTLML+   L +K+ALF F+D LKDWAKIELDRRN+Q
Sbjct: 249 IESRGKLRRLRHTGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQ 308

Query: 61  TLDDAIATVKLLINLSF--KEKKTCIDE-GDRSEAKKDGNSKQGGK-------NGKALFA 120
           TLDDAIA  + L++ S   K KK   ++ G + +  K+   K GGK       NGK   A
Sbjct: 309 TLDDAIAAAETLVDYSAQSKGKKPGPEKYGGKPDKTKNFGRKDGGKVKMFQWKNGKNDGA 368

Query: 121 NKGTT---PEPCFLCNGPHWARDCPKKNKLSAMVANPYDEEEAPMKGSAQLSAIRYLSPM 180
           ++G +   P+PCF+C GPHW RDCP +  L+A+V      ++       Q+ +++ +  M
Sbjct: 369 HRGESSNPPKPCFICKGPHWTRDCPNRKALNALVTKFQKVKQVEDAPGPQIGSMQQIGVM 428

Query: 181 ENDFSKEPQNGGWLYVDTMLNSKVALTILDTCTIENVMDPEEAKQLGLRITRRSDTEIKI 231
           + D + E +  G LY    +  K A T+ DT    N MD +EAK+LGL+    + T IK+
Sbjct: 429 KKDTTVEHK--GLLYGSIRIEGKEATTMFDTGASHNFMDVQEAKRLGLKFKEETGT-IKV 488

The following BLAST results are available for this feature:

BLAST of IVF0007528 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0007528 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BUR0	1.3e-131	100.00	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7T2W8	9.6e-90	72.15	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7SY30	1.1e-74	69.52	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7TAA5	9.7e-42	43.44	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7VEX8	1.3e-41	43.03	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00510 PE=...	[more]

BLAST of IVF0007528 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0064169.1	3.04e-168	100.00	uncharacterized protein E6C27_scaffold548G00940 [Cucumis melo var. makuwa] >TYK0...	[more]
KAA0035961.1	1.83e-112	72.15	uncharacterized protein E6C27_scaffold56G001660 [Cucumis melo var. makuwa] >TYK3...	[more]
KAA0035960.1	1.46e-93	69.52	uncharacterized protein E6C27_scaffold56G001640 [Cucumis melo var. makuwa] >TYK3...	[more]
XP_008455798.1	1.19e-48	42.62	PREDICTED: uncharacterized protein LOC103495894 [Cucumis melo]	[more]
KAA0040414.1	3.57e-48	43.44	uncharacterized protein E6C27_scaffold35G00340 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0007528 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..100
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 2..158
None	No IPR available	PANTHER	PTHR34482:SF18	RETROTRANSPOSON GAG DOMAIN, ASPARTIC PEPTIDASE DOMAIN PROTEIN-RELATED	coord: 2..158
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 111..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0007528.2	IVF0007528.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding