IVF0007501 (gene) Melon (IVF77) v1

Overview
NameIVF0007501
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr11: 4168126 .. 4168560 (-)
RNA-Seq ExpressionIVF0007501
SyntenyIVF0007501
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGTGAAGTGCTCAGAAAACTGAAAGATATGGATTACCAAGTGACGAGGAGAATTGGGGGAGATCAAAAGCGTCAGCAGTTTACTCTTTAGGAAGAAAGTTGGAACAAAATTTCGTTTCTAAAACTAAGGTGAAAAATCAAATTCATATCTTCAACTTCTTTCGATTTCAATTTCAATTTCCATTGCATCCAACCTTAAACTCTATAAATTCTTGCCCGTCTTTAATTATTTTTCCGAAATTCATGACCAGCGTTTTGGAAACGGTATGCAGAAAGAAAGACAGAGATGAGAGAGAGCTCACCGGCACGAGACTGCGGCGTCTGGATGAACGTTGGACGGAGGTGCAGCAGCGAAGCGACGGCGACGCGCGTGGGCGGCACTGTGGCTGAGCGAGCCGAGACGGTGAGAGATGTCGAGAGAGACAGCTGA

mRNA sequence

ATGAAGAGTGAAGTGCTCAGAAAACTGAAAGATATGGATTACCAAGTGACGAGGAGAATTGGGGGAGATCAAAAGCCGTTTTGGAAACGGTATGCAGAAAGAAAGACAGAGATGAGAGAGAGCTCACCGGCACGAGACTGCGGCGTCTGGATGAACGTTGGACGGAGGTGCAGCAGCGAAGCGACGGCGACGCGCGTGGGCGGCACTGTGGCTGAGCGAGCCGAGACGGTGAGAGATGTCGAGAGAGACAGCTGA

Coding sequence (CDS)

ATGAAGAGTGAAGTGCTCAGAAAACTGAAAGATATGGATTACCAAGTGACGAGGAGAATTGGGGGAGATCAAAAGCCGTTTTGGAAACGGTATGCAGAAAGAAAGACAGAGATGAGAGAGAGCTCACCGGCACGAGACTGCGGCGTCTGGATGAACGTTGGACGGAGGTGCAGCAGCGAAGCGACGGCGACGCGCGTGGGCGGCACTGTGGCTGAGCGAGCCGAGACGGTGAGAGATGTCGAGAGAGACAGCTGA

Protein sequence

MKSEVLRKLKDMDYQVTRRIGGDQKPFWKRYAERKTEMRESSPARDCGVWMNVGRRCSSEATATRVGGTVAERAETVRDVERDS
Homology
[Close]
BLAST of IVF0007501 vs. ExPASy TrEMBL
Match: A0A5A7TS90 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004630 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 6.7e-38
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0 

Query: 1  MKSEVLRKLKDMDYQVTRRIGGDQKPFWKRYAERKTEMRESSPARDCGVWMNVGRRCSSE 60
          MKSEVLRKLKDMDYQ+TRRIGGDQKPFWKRYAERKTEMRESSPARDCG WMNVGRRCSSE
Sbjct: 1  MKSEVLRKLKDMDYQMTRRIGGDQKPFWKRYAERKTEMRESSPARDCGGWMNVGRRCSSE 60

Query: 61 ATATRVGGTVAERAETVRDVERDS 85
          ATATRVGGTVAERAETVRDVERDS
Sbjct: 61 ATATRVGGTVAERAETVRDVERDS 84

[Close]
BLAST of IVF0007501 vs. ExPASy TrEMBL
Match: A0A0A0LP56 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G245450 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.6e-23
Identity = 65/93 (69.89%), Postives = 69/93 (74.19%), Query Frame = 0 

Query: 1  MKSEVLRKLKDMDYQVTRRIGGDQK---------PFWKRYAERKTEMRESSPARDCGVWM 60
          MKSE LRKLK+MDYQV RRIGGDQK           WKRYAER  EM ESSPA+D G WM
Sbjct: 1  MKSEGLRKLKEMDYQVRRRIGGDQKRQQFTLYEEARWKRYAERNIEMEESSPAQDYGGWM 60

Query: 61 NVGRRCSSEATATRVGGTVAERAETVRDVERDS 85
          NVGRRCSS A AT VGG V  RAETVRDVER++
Sbjct: 61 NVGRRCSSGAAATCVGGAVPRRAETVRDVEREN 93

[Close]
BLAST of IVF0007501 vs. ExPASy TrEMBL
Match: A0A5D3CT92 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G001840 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.8e-12
Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = 0 

Query: 38 MRESSPARDCGVWMNVGRRCSSEATATRVGGTVAERAETVRDVE 82
          MRESSPARDCGVWMNVGRRCSSEATATRVGGTVAERAET  D+E
Sbjct: 1  MRESSPARDCGVWMNVGRRCSSEATATRVGGTVAERAET--DIE 42

[Close]
BLAST of IVF0007501 vs. NCBI nr
Match: KAA0045924.1 (hypothetical protein E6C27_scaffold243G004630 [Cucumis melo var. makuwa])

HSP 1 Score: 167 bits (424), Expect = 2.96e-52
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0 

Query: 1  MKSEVLRKLKDMDYQVTRRIGGDQKPFWKRYAERKTEMRESSPARDCGVWMNVGRRCSSE 60
          MKSEVLRKLKDMDYQ+TRRIGGDQKPFWKRYAERKTEMRESSPARDCG WMNVGRRCSSE
Sbjct: 1  MKSEVLRKLKDMDYQMTRRIGGDQKPFWKRYAERKTEMRESSPARDCGGWMNVGRRCSSE 60

Query: 61 ATATRVGGTVAERAETVRDVERDS 84
          ATATRVGGTVAERAETVRDVERDS
Sbjct: 61 ATATRVGGTVAERAETVRDVERDS 84

[Close]
BLAST of IVF0007501 vs. NCBI nr
Match: KGN61781.1 (hypothetical protein Csa_006205 [Cucumis sativus])

HSP 1 Score: 120 bits (300), Expect = 3.19e-33
Identity = 65/93 (69.89%), Postives = 69/93 (74.19%), Query Frame = 0 

Query: 1  MKSEVLRKLKDMDYQVTRRIGGDQK---------PFWKRYAERKTEMRESSPARDCGVWM 60
          MKSE LRKLK+MDYQV RRIGGDQK           WKRYAER  EM ESSPA+D G WM
Sbjct: 1  MKSEGLRKLKEMDYQVRRRIGGDQKRQQFTLYEEARWKRYAERNIEMEESSPAQDYGGWM 60

Query: 61 NVGRRCSSEATATRVGGTVAERAETVRDVERDS 84
          NVGRRCSS A AT VGG V  RAETVRDVER++
Sbjct: 61 NVGRRCSSGAAATCVGGAVPRRAETVRDVEREN 93

[Close]
BLAST of IVF0007501 vs. NCBI nr
Match: TYK13666.1 (hypothetical protein E5676_scaffold299G001840 [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 6.21e-18
Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = 0 

Query: 38 MRESSPARDCGVWMNVGRRCSSEATATRVGGTVAERAETVRDVE 81
          MRESSPARDCGVWMNVGRRCSSEATATRVGGTVAERAET  D+E
Sbjct: 1  MRESSPARDCGVWMNVGRRCSSEATATRVGGTVAERAET--DIE 42

The following BLAST results are available for this feature:
BLAST of IVF0007501 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0007501 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TS906.7e-3897.62Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LP561.6e-2369.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G245450 PE=4 SV=1[more]
A0A5D3CT922.8e-1293.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of IVF0007501 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0045924.12.96e-5297.62hypothetical protein E6C27_scaffold243G004630 [Cucumis melo var. makuwa][more]
KGN61781.13.19e-3369.89hypothetical protein Csa_006205 [Cucumis sativus][more]
TYK13666.16.21e-1893.18hypothetical protein E5676_scaffold299G001840 [Cucumis melo var. makuwa][more]
BLAST of IVF0007501 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0007501.1IVF0007501.1mRNA