IVF0007456 (gene) Melon (IVF77) v1

Overview
NameIVF0007456
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMuDRA-like transposase
Locationchr04: 6032136 .. 6032381 (+)
RNA-Seq ExpressionIVF0007456
SyntenyIVF0007456
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGCGAAAGCAAGAAATTGGACTACACTAATACCAACCTTAAATGCTCACATGTATCACATGAGGTCTTCAATTTGATTCCATTGGCTATGAACATGTGTCCCTTAAAGGTTGGAGACGAAAGAGATGGATTGTATAGTATTGGCAATGAAGAGTTTGTGGACGATGGTGGCCATGAAAGTGACATTGAATTTGAAGTGATGATGATGTTCAAGGTCTTCATATTTCTAATATTGGATTGA

mRNA sequence

ATGGCGAGCGAAAGCAAGAAATTGGACTACACTAATACCAACCTTAAATGCTCACATGTATCACATGAGGTCTTCAATTTGATTCCATTGGCTATGAACATGTGTCCCTTAAAGGTTGGAGACGAAAGAGATGGATTGTATAGTATTGGCAATGAAGAGTTTGTGGACGATGGTGGCCATGAAAGTGACATTGAATTTGAAGTGATGATGATGTTCAAGGTCTTCATATTTCTAATATTGGATTGA

Coding sequence (CDS)

ATGGCGAGCGAAAGCAAGAAATTGGACTACACTAATACCAACCTTAAATGCTCACATGTATCACATGAGGTCTTCAATTTGATTCCATTGGCTATGAACATGTGTCCCTTAAAGGTTGGAGACGAAAGAGATGGATTGTATAGTATTGGCAATGAAGAGTTTGTGGACGATGGTGGCCATGAAAGTGACATTGAATTTGAAGTGATGATGATGTTCAAGGTCTTCATATTTCTAATATTGGATTGA

Protein sequence

MASESKKLDYTNTNLKCSHVSHEVFNLIPLAMNMCPLKVGDERDGLYSIGNEEFVDDGGHESDIEFEVMMMFKVFIFLILD
Homology
BLAST of IVF0007456 vs. ExPASy TrEMBL
Match: A0A5D3E646 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2376G00090 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.5e-34
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 0

Query: 1  MASESKKLDYTNTNLKCSHVSHEVFNLIPLAMNMCPLKVGDERDGLYSIGNEEFVDDGGH 60
          MASESKKLDYTNTNLKCSHVSHEVFNLIPLAMNMCPLKVGDERDGLYSIGNEEFVDDGGH
Sbjct: 10 MASESKKLDYTNTNLKCSHVSHEVFNLIPLAMNMCPLKVGDERDGLYSIGNEEFVDDGGH 69

Query: 61 ESDIEFEVMMMFKVF 76
          ESDIEFEVMMMFK F
Sbjct: 70 ESDIEFEVMMMFKEF 84

BLAST of IVF0007456 vs. ExPASy TrEMBL
Match: A0A5D3C7U6 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001830 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.7e-17
Identity = 46/67 (68.66%), Postives = 55/67 (82.09%), Query Frame = 0

Query: 1  MASESKKLDYTNTNLKCSHVSHEVFNLIPLAMNMCPLKVGDERDGLYSIGNEEFVDDGGH 60
          M S+SKKLD+   NL CSHVS+E  NL PLA N+CPL++G++R GL SI NEEFVDDGGH
Sbjct: 10 MVSKSKKLDFPTPNLNCSHVSNEDRNLRPLARNVCPLELGNDRGGLGSIDNEEFVDDGGH 69

Query: 61 ESDIEFE 68
          ESDIEF+
Sbjct: 70 ESDIEFK 76

BLAST of IVF0007456 vs. ExPASy TrEMBL
Match: A0A5A7U446 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G001340 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.7e-17
Identity = 46/67 (68.66%), Postives = 55/67 (82.09%), Query Frame = 0

Query: 1  MASESKKLDYTNTNLKCSHVSHEVFNLIPLAMNMCPLKVGDERDGLYSIGNEEFVDDGGH 60
          M S+SKKLD+   NL CSHVS+E  NL PLA N+CPL++G++R GL SI NEEFVDDGGH
Sbjct: 10 MVSKSKKLDFPTPNLNCSHVSNEDRNLRPLARNVCPLELGNDRGGLGSIDNEEFVDDGGH 69

Query: 61 ESDIEFE 68
          ESDIEF+
Sbjct: 70 ESDIEFK 76

BLAST of IVF0007456 vs. ExPASy TrEMBL
Match: A0A5D3CWR6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001190 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.5e-07
Identity = 34/67 (50.75%), Postives = 43/67 (64.18%), Query Frame = 0

Query: 1  MASESKKLDYTNTNLKCSHVSHEVFNLIPLAMNMCPLKVGDERDGLYSIGNEEFVDDGGH 60
          MASESKK    N N K SHVS+E+  L PL  NMCPL++ D   G  +I N+EFVD+ G 
Sbjct: 1  MASESKKPHSPNPNPKHSHVSNEIRELSPLTTNMCPLELEDNGYGFGNIDNDEFVDNVGP 60

Query: 61 ESDIEFE 68
          +S  E +
Sbjct: 61 DSGSELQ 67

BLAST of IVF0007456 vs. ExPASy TrEMBL
Match: A0A5A7V6Z2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001120 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.5e-07
Identity = 34/67 (50.75%), Postives = 43/67 (64.18%), Query Frame = 0

Query: 1  MASESKKLDYTNTNLKCSHVSHEVFNLIPLAMNMCPLKVGDERDGLYSIGNEEFVDDGGH 60
          MASESKK    N N K SHVS+E+  L PL  NMCPL++ D   G  +I N+EFVD+ G 
Sbjct: 1  MASESKKPHSPNPNPKHSHVSNEIRELSPLTTNMCPLELEDNGYGFGNIDNDEFVDNVGP 60

Query: 61 ESDIEFE 68
          +S  E +
Sbjct: 61 DSGSELQ 67

BLAST of IVF0007456 vs. NCBI nr
Match: KAA0051701.1 (MuDRA-like transposase [Cucumis melo var. makuwa] >TYK31607.1 MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 155 bits (391), Expect = 2.32e-46
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 0

Query: 1  MASESKKLDYTNTNLKCSHVSHEVFNLIPLAMNMCPLKVGDERDGLYSIGNEEFVDDGGH 60
          MASESKKLDYTNTNLKCSHVSHEVFNLIPLAMNMCPLKVGDERDGLYSIGNEEFVDDGGH
Sbjct: 10 MASESKKLDYTNTNLKCSHVSHEVFNLIPLAMNMCPLKVGDERDGLYSIGNEEFVDDGGH 69

Query: 61 ESDIEFEVMMMFKVF 75
          ESDIEFEVMMMFK F
Sbjct: 70 ESDIEFEVMMMFKEF 84

BLAST of IVF0007456 vs. NCBI nr
Match: KAA0048219.1 (MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 97.1 bits (240), Expect = 3.75e-22
Identity = 46/67 (68.66%), Postives = 55/67 (82.09%), Query Frame = 0

Query: 1  MASESKKLDYTNTNLKCSHVSHEVFNLIPLAMNMCPLKVGDERDGLYSIGNEEFVDDGGH 60
          M S+SKKLD+   NL CSHVS+E  NL PLA N+CPL++G++R GL SI NEEFVDDGGH
Sbjct: 10 MVSKSKKLDFPTPNLNCSHVSNEDRNLRPLARNVCPLELGNDRGGLGSIDNEEFVDDGGH 69

Query: 61 ESDIEFE 67
          ESDIEF+
Sbjct: 70 ESDIEFK 76

BLAST of IVF0007456 vs. NCBI nr
Match: TYK08037.1 (MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 97.1 bits (240), Expect = 6.97e-22
Identity = 46/67 (68.66%), Postives = 55/67 (82.09%), Query Frame = 0

Query: 1  MASESKKLDYTNTNLKCSHVSHEVFNLIPLAMNMCPLKVGDERDGLYSIGNEEFVDDGGH 60
          M S+SKKLD+   NL CSHVS+E  NL PLA N+CPL++G++R GL SI NEEFVDDGGH
Sbjct: 10 MVSKSKKLDFPTPNLNCSHVSNEDRNLRPLARNVCPLELGNDRGGLGSIDNEEFVDDGGH 69

Query: 61 ESDIEFE 67
          ESDIEF+
Sbjct: 70 ESDIEFK 76

BLAST of IVF0007456 vs. NCBI nr
Match: TYK16337.1 (hypothetical protein E5676_scaffold21G001190 [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 6.96e-11
Identity = 34/67 (50.75%), Postives = 43/67 (64.18%), Query Frame = 0

Query: 1  MASESKKLDYTNTNLKCSHVSHEVFNLIPLAMNMCPLKVGDERDGLYSIGNEEFVDDGGH 60
          MASESKK    N N K SHVS+E+  L PL  NMCPL++ D   G  +I N+EFVD+ G 
Sbjct: 1  MASESKKPHSPNPNPKHSHVSNEIRELSPLTTNMCPLELEDNGYGFGNIDNDEFVDNVGP 60

Query: 61 ESDIEFE 67
          +S  E +
Sbjct: 61 DSGSELQ 67

BLAST of IVF0007456 vs. NCBI nr
Match: KAA0063010.1 (hypothetical protein E6C27_scaffold468G001120 [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 6.96e-11
Identity = 34/67 (50.75%), Postives = 43/67 (64.18%), Query Frame = 0

Query: 1  MASESKKLDYTNTNLKCSHVSHEVFNLIPLAMNMCPLKVGDERDGLYSIGNEEFVDDGGH 60
          MASESKK    N N K SHVS+E+  L PL  NMCPL++ D   G  +I N+EFVD+ G 
Sbjct: 1  MASESKKPHSPNPNPKHSHVSNEIRELSPLTTNMCPLELEDNGYGFGNIDNDEFVDNVGP 60

Query: 61 ESDIEFE 67
          +S  E +
Sbjct: 61 DSGSELQ 67

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3E6461.5e-3498.67MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2... [more]
A0A5D3C7U63.7e-1768.66MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2... [more]
A0A5A7U4463.7e-1768.66MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6... [more]
A0A5D3CWR64.5e-0750.75Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V6Z24.5e-0750.75Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0051701.12.32e-4698.67MuDRA-like transposase [Cucumis melo var. makuwa] >TYK31607.1 MuDRA-like transpo... [more]
KAA0048219.13.75e-2268.66MuDRA-like transposase [Cucumis melo var. makuwa][more]
TYK08037.16.97e-2268.66MuDRA-like transposase [Cucumis melo var. makuwa][more]
TYK16337.16.96e-1150.75hypothetical protein E5676_scaffold21G001190 [Cucumis melo var. makuwa][more]
KAA0063010.16.96e-1150.75hypothetical protein E6C27_scaffold468G001120 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0007456.1IVF0007456.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane