IVF0007380 (gene) Melon (IVF77) v1

Overview


Name	IVF0007380
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	nitrate regulatory gene2 protein-like
Location	chr02: 15751037 .. 15751357 (-)
RNA-Seq Expression	IVF0007380
Synteny	IVF0007380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATTAGGAGGAAGGAAGGGAGAACAACGATCAGATTGGGAGGTTGGAGAGGAGAAAATAAACAACATCCCAATATGTGGAAGGTTTTATGGAGGAAATTAAGAAGAGAAAAGAGGAAGATTTTAGAGTCAAATACAACCACATTTTATTCATCAGGCCCCAAGTTGATTCCTTATGATCCTTTGTCTTATTCTCAGAATTTCGATCAAGGCACCGCCGGAGAAGAACTTGATAATCTTTCCCGATCCTTCTCCGCCCGCTTTGCTCTCGCCGATGTCGCTTCCTCAATCTTTCTTCACAAACAACATCTTCAATAA

mRNA sequence

ATGAAAATTAGGAGGAAGGAAGGGAGAACAACGATCAGATTGGGAGGTTGGAGAGGAGAAAATAAACAACATCCCAATATGTGGAAGGTTTTATGGAGGAAATTAAGAAGAGAAAAGAGGAAGATTTTAGAGTCAAATACAACCACATTTTATTCATCAGGCCCCAAGTTGATTCCTTATGATCCTTTGTCTTATTCTCAGAATTTCGATCAAGGCACCGCCGGAGAAGAACTTGATAATCTTTCCCGATCCTTCTCCGCCCGCTTTGCTCTCGCCGATGTCGCTTCCTCAATCTTTCTTCACAAACAACATCTTCAATAA

Coding sequence (CDS)

ATGAAAATTAGGAGGAAGGAAGGGAGAACAACGATCAGATTGGGAGGTTGGAGAGGAGAAAATAAACAACATCCCAATATGTGGAAGGTTTTATGGAGGAAATTAAGAAGAGAAAAGAGGAAGATTTTAGAGTCAAATACAACCACATTTTATTCATCAGGCCCCAAGTTGATTCCTTATGATCCTTTGTCTTATTCTCAGAATTTCGATCAAGGCACCGCCGGAGAAGAACTTGATAATCTTTCCCGATCCTTCTCCGCCCGCTTTGCTCTCGCCGATGTCGCTTCCTCAATCTTTCTTCACAAACAACATCTTCAATAA

Protein sequence

MKIRRKEGRTTIRLGGWRGENKQHPNMWKVLWRKLRREKRKILESNTTTFYSSGPKLIPYDPLSYSQNFDQGTAGEELDNLSRSFSARFALADVASSIFLHKQHLQ

Homology

[Close]

BLAST of IVF0007380 vs. ExPASy TrEMBL
Match: A0A0A0LWX3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G370510 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.2e-47
Identity = 99/106 (93.40%), Postives = 101/106 (95.28%), Query Frame = 0


Query: 1   MKIRRKEGRTTIRLGGWRGENKQHPNMWKVLWRKLRREKRKILE-SNTTTFYSSGPKLIP 60
           MKI RK+GRTTIRLGGWRGENKQ PNMWKVLWRKLRREKRKILE SNTTTFYSSGPKLIP
Sbjct: 1   MKIMRKQGRTTIRLGGWRGENKQQPNMWKVLWRKLRREKRKILESSNTTTFYSSGPKLIP 60

Query: 61  YDPLSYSQNFDQGTAGEELDNLSRSFSARFALADVASSIFLHKQHL 106
           YDP SYSQNFDQGTAGEELDNLSRSFSARFALADVAS+ FLHKQHL
Sbjct: 61  YDPFSYSQNFDQGTAGEELDNLSRSFSARFALADVASATFLHKQHL 106

[Close]

BLAST of IVF0007380 vs. ExPASy TrEMBL
Match: I1KIS1 (Uncharacterized protein OS=Glycine max OX=3847 GN=102669499 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 9.5e-13
Identity = 48/103 (46.60%), Postives = 64/103 (62.14%), Query Frame = 0


Query: 9   RTTIRLGGWRGENKQHPN------MWKVLWRKLRREKRKILESNTTTFYSSGPKLIPYDP 68
           RT ++ G +     +H N       WKVLW KL++EK+K+ ES      +S P  +PYDP
Sbjct: 12  RTIMKSGSYCCNEIEHANCKSSKMRWKVLWMKLKKEKKKLFES------ASSPLQVPYDP 71

Query: 69  LSYSQNFDQGTAGEELDNLSRSFSARFALADVASSIFLHKQHL 106
            +YSQNFDQGTA +E DN SRSFS RF  AD ++S  L K+ +
Sbjct: 72  YTYSQNFDQGTAKDEPDNFSRSFSVRF--ADPSTSRVLMKKRV 106

[Close]

BLAST of IVF0007380 vs. ExPASy TrEMBL
Match: A0A4D6LVT9 (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG5g177 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.7e-12
Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 0


Query: 28  WKVLWRKLRREKRKILESNTTTFYSSGPKLIPYDPLSYSQNFDQGTAGEELDNLSRSFSA 87
           WKVLW KL++EK+K+ ES      SS P  +PYDP +YS NFD+GTA +E DNLSRSFSA
Sbjct: 38  WKVLWMKLKKEKKKLFES-----ASSSPLQLPYDPYTYSLNFDRGTAKDEPDNLSRSFSA 97

Query: 88  RFALADVASSIFLHKQHL 106
           +F  AD +SS  L K+ +
Sbjct: 98  KF--ADPSSSKLLVKKEV 108

[Close]

BLAST of IVF0007380 vs. ExPASy TrEMBL
Match: A0A151S3I6 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_028966 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 8.0e-12
Identity = 43/78 (55.13%), Postives = 54/78 (69.23%), Query Frame = 0


Query: 28  WKVLWRKLRREKRKILESNTTTFYSSGPKLIPYDPLSYSQNFDQGTAGEELDNLSRSFSA 87
           WKVLW KL++EK+K+ E       S+ P  +PYDP SYSQNFDQGTA +E DNLSRSF  
Sbjct: 35  WKVLWMKLKKEKKKLFE-------SASPLQVPYDPYSYSQNFDQGTAKDEPDNLSRSFCV 94

Query: 88  RFALADVASSIFLHKQHL 106
           RF  AD ++S  L K+ +
Sbjct: 95  RF--ADPSTSRVLVKKRV 103

[Close]

BLAST of IVF0007380 vs. ExPASy TrEMBL
Match: A0A371GGA5 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_28657 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.4e-11
Identity = 38/63 (60.32%), Postives = 47/63 (74.60%), Query Frame = 0


Query: 28  WKVLWRKLRREKRKILESNTTTFYSSGPKLIPYDPLSYSQNFDQGTAGEELDNLSRSFSA 87
           WK+LW KL++EK+K+ E       S+ P  +PYDP +YSQNFDQGTA +E DNLSRSFS 
Sbjct: 45  WKMLWMKLKKEKKKLFE-------SASPVQVPYDPYTYSQNFDQGTAKDEPDNLSRSFSV 100

Query: 88  RFA 91
           RFA
Sbjct: 105 RFA 100

[Close]

BLAST of IVF0007380 vs. NCBI nr
Match: KAE8653121.1 (hypothetical protein Csa_019717, partial [Cucumis sativus])

HSP 1 Score: 199 bits (506), Expect = 5.45e-64
Identity = 99/106 (93.40%), Postives = 101/106 (95.28%), Query Frame = 0


Query: 1   MKIRRKEGRTTIRLGGWRGENKQHPNMWKVLWRKLRREKRKILES-NTTTFYSSGPKLIP 60
           MKI RK+GRTTIRLGGWRGENKQ PNMWKVLWRKLRREKRKILES NTTTFYSSGPKLIP
Sbjct: 6   MKIMRKQGRTTIRLGGWRGENKQQPNMWKVLWRKLRREKRKILESSNTTTFYSSGPKLIP 65

Query: 61  YDPLSYSQNFDQGTAGEELDNLSRSFSARFALADVASSIFLHKQHL 105
           YDP SYSQNFDQGTAGEELDNLSRSFSARFALADVAS+ FLHKQHL
Sbjct: 66  YDPFSYSQNFDQGTAGEELDNLSRSFSARFALADVASATFLHKQHL 111

[Close]

BLAST of IVF0007380 vs. NCBI nr
Match: KAG6587950.1 (hypothetical protein SDJN03_16515, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 116 bits (290), Expect = 1.64e-29
Identity = 65/99 (65.66%), Postives = 69/99 (69.70%), Query Frame = 0


Query: 5   RKEGRTTIRLGGWRGENKQHPNMWKVLWRKLRREKRKILESNTTTFYSSGPKLIPYDPLS 64
           +K  + TIRLG WR      PN+WKVLWRKLRREKR     N TT YSSG  LIPYDP S
Sbjct: 154 KKSSKQTIRLGRWRSG--YQPNLWKVLWRKLRREKR-----NKTTTYSSG-NLIPYDPFS 213

Query: 65  YSQNFDQGTAGEELDNLSRSFSARFALADVASSIFLHKQ 103
           YS NFDQG A EE D L RSFSARFALAD AS+ FL  Q
Sbjct: 214 YSHNFDQGNAAEEPDILCRSFSARFALADAASAFFLDNQ 244

[Close]

BLAST of IVF0007380 vs. NCBI nr
Match: KAG7021839.1 (hypothetical protein SDJN02_15567, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 112 bits (281), Expect = 3.65e-28
Identity = 62/99 (62.63%), Postives = 69/99 (69.70%), Query Frame = 0


Query: 5   RKEGRTTIRLGGWRGENKQHPNMWKVLWRKLRREKRKILESNTTTFYSSGPKLIPYDPLS 64
           +K  + TIRLG WR      PN+WK+LWRKLRR+KR     N TT YSSG  LIPYDP S
Sbjct: 154 KKSSKQTIRLGRWRSG--YQPNLWKLLWRKLRRQKR-----NKTTTYSSG-NLIPYDPFS 213

Query: 65  YSQNFDQGTAGEELDNLSRSFSARFALADVASSIFLHKQ 103
           YS NFDQG A E+ D L RSFSARFALAD AS+ FL  Q
Sbjct: 214 YSHNFDQGNAAEDPDILCRSFSARFALADAASAFFLDNQ 244

[Close]

BLAST of IVF0007380 vs. NCBI nr
Match: XP_006584187.1 (uncharacterized protein LOC102669499 [Glycine max] >XP_028241302.1 uncharacterized protein LOC114419732 [Glycine soja] >KRH48409.1 hypothetical protein GLYMA_07G087300v4 [Glycine max])

HSP 1 Score: 83.6 bits (205), Expect = 3.10e-18
Identity = 48/103 (46.60%), Postives = 64/103 (62.14%), Query Frame = 0


Query: 9   RTTIRLGGWRGENKQHPNM------WKVLWRKLRREKRKILESNTTTFYSSGPKLIPYDP 68
           RT ++ G +     +H N       WKVLW KL++EK+K+ ES      +S P  +PYDP
Sbjct: 12  RTIMKSGSYCCNEIEHANCKSSKMRWKVLWMKLKKEKKKLFES------ASSPLQVPYDP 71

Query: 69  LSYSQNFDQGTAGEELDNLSRSFSARFALADVASSIFLHKQHL 105
            +YSQNFDQGTA +E DN SRSFS RFA  D ++S  L K+ +
Sbjct: 72  YTYSQNFDQGTAKDEPDNFSRSFSVRFA--DPSTSRVLMKKRV 106

[Close]

BLAST of IVF0007380 vs. NCBI nr
Match: KHN20690.1 (hypothetical protein glysoja_019007 [Glycine soja])

HSP 1 Score: 81.6 bits (200), Expect = 1.22e-17
Identity = 43/78 (55.13%), Postives = 55/78 (70.51%), Query Frame = 0


Query: 28  WKVLWRKLRREKRKILESNTTTFYSSGPKLIPYDPLSYSQNFDQGTAGEELDNLSRSFSA 87
           WKVLW KL++EK+K+ ES      +S P  +PYDP +YSQNFDQGTA +E DN SRSFS 
Sbjct: 23  WKVLWMKLKKEKKKLFES------ASSPLQVPYDPYTYSQNFDQGTAKDEPDNFSRSFSV 82

Query: 88  RFALADVASSIFLHKQHL 105
           RFA  D ++S  L K+ +
Sbjct: 83  RFA--DPSTSRVLMKKRV 92

[Close]

BLAST of IVF0007380 vs. TAIR 10
Match: AT2G25735.1 (unknown protein; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 1.3e-06
Identity = 40/94 (42.55%), Postives = 48/94 (51.06%), Query Frame = 0


Query: 9   RTTIRLGGWR---GENKQHPN------MWKVLWRKLRREKRKILESNTTTFYSSGPKLIP 68
           R TI LG +     E KQH         WKVL  KL     K+L S      +S  K++ 
Sbjct: 23  RETIVLGRYSKSCREQKQHQRRERLLPKWKVLLMKL-----KLLPSR-----ASSTKVVA 82

Query: 69  YDPLSYSQNFDQGTA---GEELDNLSRSFSARFA 91
           Y+P  YS NFDQG      +E +NLSRSFS RFA
Sbjct: 83  YEPCDYSLNFDQGPGWHDHDEPENLSRSFSCRFA 106

The following BLAST results are available for this feature:

BLAST of IVF0007380 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0007380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWX3	1.2e-47	93.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G370510 PE=4 SV=1	[more]
I1KIS1	9.5e-13	46.60	Uncharacterized protein OS=Glycine max OX=3847 GN=102669499 PE=4 SV=1	[more]
A0A4D6LVT9	4.7e-12	56.41	Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG5g177 PE=4 SV=1	[more]
A0A151S3I6	8.0e-12	55.13	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_028966 PE=4 SV=1	[more]
A0A371GGA5	1.4e-11	60.32	Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_28657 P...	[more]

BLAST of IVF0007380 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8653121.1	5.45e-64	93.40	hypothetical protein Csa_019717, partial [Cucumis sativus]	[more]
KAG6587950.1	1.64e-29	65.66	hypothetical protein SDJN03_16515, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7021839.1	3.65e-28	62.63	hypothetical protein SDJN02_15567, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_006584187.1	3.10e-18	46.60	uncharacterized protein LOC102669499 [Glycine max] >XP_028241302.1 uncharacteriz...	[more]
KHN20690.1	1.22e-17	55.13	hypothetical protein glysoja_019007 [Glycine soja]	[more]

BLAST of IVF0007380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25735.1	1.3e-06	42.55	unknown protein; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33168:SF44	EXPRESSED PROTEIN	coord: 23..104
None	No IPR available	PANTHER	PTHR33168	STRESS INDUCED PROTEIN-RELATED	coord: 23..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0007380.2	IVF0007380.2	mRNA