IVF0007357 (gene) Melon (IVF77) v1

Overview


Name	IVF0007357
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr02: 21617051 .. 21618806 (-)
RNA-Seq Expression	IVF0007357
Synteny	IVF0007357

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGTCATCTTCCACCGTCCTTCTATCCTTTCTCTGATTTCTCTCATAAAATCATGCACCCACAAATCCCAATTGCTCCAAATCCATGCCCACATCATCAGAACTTCTTCAATACAAGACCCCATTGTTTCCCTCCGCTTCTTGACTCGTACTGCCTCTGCCCCTTTTCGCGATTTGGGCTATTCTCGACGATTCTTAGATCTCCTGACTAACCCACTTGTTTCTCATTACAATGCGATGTTGCGAGCTTACTCTGTGAGCCGTTCACACTAGAAGGATTGTACGTGTACAGAGACATGGAGAGGCAAGGAGTTCGTGCTGATCCTTTGTCTTCTTCCTTTGCCGTTAAGTCGTGTATAAAGTTGCTCTCGTTACTTTTCGGGATTCAGATTCACGCGAGGATTTTTATATATGGGCATCAAGCGGATAGTCTATTGCTCACTTCCATGATGGACCTGTATTCTCACTGTGGCAAACCTGAGGAAGCGTGCAAATTGTTCGATGAAGTTCCTCAAAAAGATGTCGTTGCTTGGAACGTTTTGATTTCTTGTTTAACTCGCAATAAACGAACAAGGGATGCTTTGGGTCTGTTTGAGATCATGCAGAGTCCAACGTATCTCTGCCAACCTGATAAAGTTACTTGTTTACTCCTCCTCCAAGCCTGTGCAGACTTGAATGCATTGGAGTTCGGTGAAAGGATTCATGGTTATATTCAACAACACTGTTATAATACCGAGAGTAATTGTGTAATTCGCTGATATCAATGTATTCGCGGTGTGGGCGTGTGGATAAGGCTTATGAGGTGTTTGATAAAATGCCAGAGAAGAATGTTGTTTCATGGAGTGCGATGATTTCCGGGTTATCGATGAATGGGCACGGGAGAGAAGCAATTGAAGCATTTTGGGAGATGCAAAAGAATGGTGTCGAGCCTGATGATCATACTTTCACTGCTGTTCTTTCTGCTTGTAGCCACTGTGGCCTGGTTGATGAAGGAATGGCATTTTTTGATCGTATGAGACAGGAGCTCATGATAGCTCCCAACGTCCATCACTATGGATGTATAGTTGATCTCTTGGGTCGTGCTGGAATGCTCGATCAAGCCTATGAGCTCATAATGTCAATGGAGGTAAGACCAGATGCGACAATGTGGAGAACCCTTCTTGGAGCTTGTAGAATTCACGGTCATGCAAACCTTGGGGAGCGCATAGTTGAACATTTGATTGAACTTAAATCTCAAGAAGCAGGAGATTATGTATTGTTGCTCAACATTTATTCTTCGGCTGGCAAATGGGACAAGGTAACTGAATTGAGGAAACTTATGAAAGAGAAGGGTATTTATACCACACCTTGCTGCACCACAATAGAACTGAACGGGGTGGTGCATGAGTTTGCTGTGGATGATATTTCACATCCTATGAAAGACAAGATCTACAAGCAGTTGGATGAGATCAACAAGCAGCTAAAAATTGCAGGTTATGAAGCTGAAATGTCATCTGAATTACATAGATTAAAGCCAGAAGATAAAGGGTATGCACTTTCTAACCATAGTGAGAAATTGGCCATAGCCTTTGGGGTTCTTGCCACTCCACCGGGAAGAACCATCAGAGTCGCAAATAACATTCGTACTTGCATGGATTGTCATAACTTTGCTAAGTACATCTCAAGTGTTTATAACCGAAAAGTGGTTCTTAGAGACCGAAGTCGGTTCCATCATTTCCAAGAGGGTCGGTGTTCCTGCAACGATTTTTGGTAA

mRNA sequence

ATGTATGTCATCTTCCACCGTCCTTCTATCCTTTCTCTGATTTCTCTCATAAAATCATGCACCCACAAATCCCAATTGCTCCAAATCCATGCCCACATCATCAGAACTTCTTCAATACAAGACCCCATTGTTTCCCTCCGCTTCTTGACTCGTACTGCCTCTGCCCCTTTTCGCGATTTGGGCTATTCTCGACGATTCTTAGATCTCCTGACTAACCCACTTGTTTCTCATTACAATGCGATGTTGCGAGCTTACTCTGTGAGCCACATGGAGAGGCAAGGAGTTCGTGCTGATCCTTTGTCTTCTTCCTTTGCCGTTAAGTCGTGTATAAAGTTGCTCTCGTTACTTTTCGGGATTCAGATTCACGCGAGGATTTTTATATATGGGCATCAAGCGGATAGTCTATTGCTCACTTCCATGATGGACCTGTATTCTCACTGTGGCAAACCTGAGGAAGCGTGCAAATTGTTCGATGAAGTTCCTCAAAAAGATGTCGTTGCTTGGAACGTTTTGATTTCTTGTTTAACTCGCAATAAACGAACAAGGGATGCTTTGGGTCTGTTTGAGATCATGCAGAGTCCAACGTATCTCTGCCAACCTGATAAAGTTACTTGTTTACTCCTCCTCCAAGCCTGTGCAGACTTGAATGCATTGGAGTTCGGTGAAAGGATTCATGGTTATATTCAACAACACTGTTATAATACCGAGAGTAATTGTGCTTATGAGGTGTTTGATAAAATGCCAGAGAAGAATGTTGTTTCATGGAGTGCGATGATTTCCGGGTTATCGATGAATGGGCACGGGAGAGAAGCAATTGAAGCATTTTGGGAGATGCAAAAGAATGGTGTCGAGCCTGATGATCATACTTTCACTGCTGTTCTTTCTGCTTGTAGCCACTGTGGCCTGGTTGATGAAGGAATGGCATTTTTTGATCGTATGAGACAGGAGCTCATGATAGCTCCCAACGTCCATCACTATGGATGTATAGTTGATCTCTTGGGTCGTGCTGGAATGCTCGATCAAGCCTATGAGCTCATAATGTCAATGGAGGTAAGACCAGATGCGACAATGTGGAGAACCCTTCTTGGAGCTTGTAGAATTCACGGTCATGCAAACCTTGGGGAGCGCATAGTTGAACATTTGATTGAACTTAAATCTCAAGAAGCAGGAGATTATGTATTGTTGCTCAACATTTATTCTTCGGCTGGCAAATGGGACAAGGTAACTGAATTGAGGAAACTTATGAAAGAGAAGGGTATTTATACCACACCTTGCTGCACCACAATAGAACTGAACGGGGTGGTGCATGAGTTTGCTGTGGATGATATTTCACATCCTATGAAAGACAAGATCTACAAGCAGTTGGATGAGATCAACAAGCAGCTAAAAATTGCAGGTTATGAAGCTGAAATGTCATCTGAATTACATAGATTAAAGCCAGAAGATAAAGGGTATGCACTTTCTAACCATAGTGAGAAATTGGCCATAGCCTTTGGGGTTCTTGCCACTCCACCGGGAAGAACCATCAGAGTCGCAAATAACATTCGTACTTGCATGGATTGTCATAACTTTGCTAAGTACATCTCAAGTGTTTATAACCGAAAAGTGGTTCTTAGAGACCGAAGTCGGTTCCATCATTTCCAAGAGGGTCGGTGTTCCTGCAACGATTTTTGGTAA

Coding sequence (CDS)

ATGTATGTCATCTTCCACCGTCCTTCTATCCTTTCTCTGATTTCTCTCATAAAATCATGCACCCACAAATCCCAATTGCTCCAAATCCATGCCCACATCATCAGAACTTCTTCAATACAAGACCCCATTGTTTCCCTCCGCTTCTTGACTCGTACTGCCTCTGCCCCTTTTCGCGATTTGGGCTATTCTCGACGATTCTTAGATCTCCTGACTAACCCACTTGTTTCTCATTACAATGCGATGTTGCGAGCTTACTCTGTGAGCCACATGGAGAGGCAAGGAGTTCGTGCTGATCCTTTGTCTTCTTCCTTTGCCGTTAAGTCGTGTATAAAGTTGCTCTCGTTACTTTTCGGGATTCAGATTCACGCGAGGATTTTTATATATGGGCATCAAGCGGATAGTCTATTGCTCACTTCCATGATGGACCTGTATTCTCACTGTGGCAAACCTGAGGAAGCGTGCAAATTGTTCGATGAAGTTCCTCAAAAAGATGTCGTTGCTTGGAACGTTTTGATTTCTTGTTTAACTCGCAATAAACGAACAAGGGATGCTTTGGGTCTGTTTGAGATCATGCAGAGTCCAACGTATCTCTGCCAACCTGATAAAGTTACTTGTTTACTCCTCCTCCAAGCCTGTGCAGACTTGAATGCATTGGAGTTCGGTGAAAGGATTCATGGTTATATTCAACAACACTGTTATAATACCGAGAGTAATTGTGCTTATGAGGTGTTTGATAAAATGCCAGAGAAGAATGTTGTTTCATGGAGTGCGATGATTTCCGGGTTATCGATGAATGGGCACGGGAGAGAAGCAATTGAAGCATTTTGGGAGATGCAAAAGAATGGTGTCGAGCCTGATGATCATACTTTCACTGCTGTTCTTTCTGCTTGTAGCCACTGTGGCCTGGTTGATGAAGGAATGGCATTTTTTGATCGTATGAGACAGGAGCTCATGATAGCTCCCAACGTCCATCACTATGGATGTATAGTTGATCTCTTGGGTCGTGCTGGAATGCTCGATCAAGCCTATGAGCTCATAATGTCAATGGAGGTAAGACCAGATGCGACAATGTGGAGAACCCTTCTTGGAGCTTGTAGAATTCACGGTCATGCAAACCTTGGGGAGCGCATAGTTGAACATTTGATTGAACTTAAATCTCAAGAAGCAGGAGATTATGTATTGTTGCTCAACATTTATTCTTCGGCTGGCAAATGGGACAAGGTAACTGAATTGAGGAAACTTATGAAAGAGAAGGGTATTTATACCACACCTTGCTGCACCACAATAGAACTGAACGGGGTGGTGCATGAGTTTGCTGTGGATGATATTTCACATCCTATGAAAGACAAGATCTACAAGCAGTTGGATGAGATCAACAAGCAGCTAAAAATTGCAGGTTATGAAGCTGAAATGTCATCTGAATTACATAGATTAAAGCCAGAAGATAAAGGGTATGCACTTTCTAACCATAGTGAGAAATTGGCCATAGCCTTTGGGGTTCTTGCCACTCCACCGGGAAGAACCATCAGAGTCGCAAATAACATTCGTACTTGCATGGATTGTCATAACTTTGCTAAGTACATCTCAAGTGTTTATAACCGAAAAGTGGTTCTTAGAGACCGAAGTCGGTTCCATCATTTCCAAGAGGGTCGGTGTTCCTGCAACGATTTTTGGTAA

Protein sequence

MYVIFHRPSILSLISLIKSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFLTRTASAPFRDLGYSRRFLDLLTNPLVSHYNAMLRAYSVSHMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHCYNTESNCAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYVLLLNIYSSAGKWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLKPEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNIRTCMDCHNFAKYISSVYNRKVVLRDRSRFHHFQEGRCSCNDFW

Homology

[Close]

BLAST of IVF0007357 vs. ExPASy Swiss-Prot
Match: Q9SN85 (Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H76 PE=2 SV=1)

HSP 1 Score: 674.1 bits (1738), Expect = 1.4e-192
Identity = 343/578 (59.34%), Postives = 426/578 (73.70%), Query Frame = 0


Query: 13  LISLIKSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFLTRTA-SAPFRDLGYSRRFLDLLT 72
           L+SLI S T K  L QIHA ++RTS I++  V   FL+R A S   RD+ YS R      
Sbjct: 14  LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRL 73

Query: 73  NPLVSHYNAMLRAYSVSHMERQGVR------------ADPLSSSFAVKSCIKLLSLLFGI 132
           NP +SH N M+RA+S+S    +G R            A+PLSSSFA+K CIK   LL G+
Sbjct: 74  NPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGL 133

Query: 133 QIHARIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNK 192
           QIH +IF  G  +DSLL+T++MDLYS C    +ACK+FDE+P++D V+WNVL SC  RNK
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNK 193

Query: 193 RTRDALGLFEIMQSPTYLC-QPDKVTCLLLLQACADLNALEFGERIHGYIQQH------- 252
           RTRD L LF+ M++    C +PD VTCLL LQACA+L AL+FG+++H +I ++       
Sbjct: 194 RTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALN 253

Query: 253 ----CYNTESNC-----AYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNG 312
                 +  S C     AY+VF  M E+NVVSW+A+ISGL+MNG G+EAIEAF EM K G
Sbjct: 254 LSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG 313

Query: 313 VEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQ-ELMIAPNVHHYGCIVDLLGRAGMLDQ 372
           + P++ T T +LSACSH GLV EGM FFDRMR  E  I PN+HHYGC+VDLLGRA +LD+
Sbjct: 314 ISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDK 373

Query: 373 AYELIMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYVLLLNIYSS 432
           AY LI SME++PD+T+WRTLLGACR+HG   LGER++ HLIELK++EAGDYVLLLN YS+
Sbjct: 374 AYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYST 433

Query: 433 AGKWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINKQ 492
            GKW+KVTELR LMKEK I+T P C+ IEL G VHEF VDD+SHP K++IYK L EIN+Q
Sbjct: 434 VGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQ 493

Query: 493 LKIAGYEAEMSSELHRLK-PEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNIRTCMD 552
           LKIAGY AE++SELH L+  E+KGYAL  HSEKLAIAFG+L TPPG TIRV  N+RTC+D
Sbjct: 494 LKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVD 553

Query: 553 CHNFAKYISSVYNRKVVLRDRSRFHHFQEGRCSCNDFW 559
           CHNFAK++S VY+R V++RDRSRFHHF+ G CSCNDFW
Sbjct: 554 CHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591

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BLAST of IVF0007357 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 1.5e-111
Identity = 201/514 (39.11%), Postives = 308/514 (59.92%), Query Frame = 0


Query: 75  VSHYNAMLRAYS-----------VSHMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHA 134
           V  +NAM+  Y+              M +  VR D  +    V +C +  S+  G Q+H 
Sbjct: 231 VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHL 290

Query: 135 RIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRD 194
            I  +G  ++  ++ +++DLYS CG+ E AC LF+ +P KDV++WN LI   T     ++
Sbjct: 291 WIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKE 350

Query: 195 ALGLF-EIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHCYNT------- 254
           AL LF E+++S      P+ VT L +L ACA L A++ G  IH YI +            
Sbjct: 351 ALLLFQEMLRSGE---TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 410

Query: 255 -----------ESNCAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVE 314
                      +   A++VF+ +  K++ SW+AMI G +M+G    + + F  M+K G++
Sbjct: 411 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 470

Query: 315 PDDHTFTAVLSACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLLGRAGMLDQAYE 374
           PDD TF  +LSACSH G++D G   F  M Q+  + P + HYGC++DLLG +G+  +A E
Sbjct: 471 PDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 530

Query: 375 LIMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYVLLLNIYSSAGK 434
           +I  ME+ PD  +W +LL AC++HG+  LGE   E+LI+++ +  G YVLL NIY+SAG+
Sbjct: 531 MINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGR 590

Query: 435 WDKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINKQLKI 494
           W++V + R L+ +KG+   P C++IE++ VVHEF + D  HP   +IY  L+E+   L+ 
Sbjct: 591 WNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 650

Query: 495 AGYEAEMSSELHRLKPEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNIRTCMDCHNF 554
           AG+  + S  L  ++ E K  AL +HSEKLAIAFG+++T PG  + +  N+R C +CH  
Sbjct: 651 AGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEA 710

Query: 555 AKYISSVYNRKVVLRDRSRFHHFQEGRCSCNDFW 559
            K IS +Y R+++ RDR+RFHHF++G CSCND+W
Sbjct: 711 TKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

[Close]

BLAST of IVF0007357 vs. ExPASy Swiss-Prot
Match: Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.4e-109
Identity = 217/624 (34.78%), Postives = 340/624 (54.49%), Query Frame = 0


Query: 12  SLISLIKSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFL--TRTASAPFRDLGYSRRFLDL 71
           SL   I +C     L QIHA  I++  ++D + +   L    T+    RDL Y+ +  + 
Sbjct: 25  SLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQ 84

Query: 72  LTNPLVSHYNAMLRAYSVSH--------------MERQGVRADPLSSSFAVKSCIKLLSL 131
           +       +N ++R +S S               M  + V  +  +    +K+C K   +
Sbjct: 85  MPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKI 144

Query: 132 LFGIQIHARIFIYGHQADSLLLTSMMDLYSHCGKPEEA---------------------- 191
             G QIH     YG   D  ++++++ +Y  CG  ++A                      
Sbjct: 145 QEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKR 204

Query: 192 -------------------CK----LFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEI 251
                              CK    LFD++ Q+ VV+WN +IS  + N   +DA+ +F  
Sbjct: 205 DGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFRE 264

Query: 252 MQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHCYNTE-----------SNC 311
           M+      +P+ VT + +L A + L +LE GE +H Y +      +           S C
Sbjct: 265 MKKGD--IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKC 324

Query: 312 -----AYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPDDHTFTAVL 371
                A  VF+++P +NV++WSAMI+G +++G   +AI+ F +M++ GV P D  +  +L
Sbjct: 325 GIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLL 384

Query: 372 SACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPD 431
           +ACSH GLV+EG  +F +M     + P + HYGC+VDLLGR+G+LD+A E I++M ++PD
Sbjct: 385 TACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPD 444

Query: 432 ATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYVLLLNIYSSAGKWDKVTELRKL 491
             +W+ LLGACR+ G+  +G+R+   L+++   ++G YV L N+Y+S G W +V+E+R  
Sbjct: 445 DVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLR 504

Query: 492 MKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSE 551
           MKEK I   P C+ I+++GV+HEF V+D SHP   +I   L EI+ +L++AGY    +  
Sbjct: 505 MKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQV 564

Query: 552 LHRLKPEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNIRTCMDCHNFAKYISSVYNR 559
           L  L+ EDK   L  HSEK+A AFG+++T PG+ IR+  N+R C DCH+  K IS VY R
Sbjct: 565 LLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKR 624

[Close]

BLAST of IVF0007357 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 1.9e-109
Identity = 205/517 (39.65%), Postives = 310/517 (59.96%), Query Frame = 0


Query: 90  MERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFIYGHQADSLLLTSMMDLYSHCGK 149
           ME + V+A  ++    + +C K+ +L FG Q+ + I       +  L  +M+D+Y+ CG 
Sbjct: 223 MESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGS 282

Query: 150 PEEACKLFD-------------------------------EVPQKDVVAWNVLISCLTRN 209
            E+A +LFD                                +PQKD+VAWN LIS   +N
Sbjct: 283 IEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQN 342

Query: 210 KRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQH------- 269
            +  +AL +F  +Q    + + +++T +  L ACA + ALE G  IH YI++H       
Sbjct: 343 GKPNEALIVFHELQLQKNM-KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFH 402

Query: 270 ----CYNTESNC-----AYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNG 329
                 +  S C     + EVF+ + +++V  WSAMI GL+M+G G EA++ F++MQ+  
Sbjct: 403 VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN 462

Query: 330 VEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLLGRAGMLDQA 389
           V+P+  TFT V  ACSH GLVDE  + F +M     I P   HY CIVD+LGR+G L++A
Sbjct: 463 VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA 522

Query: 390 YELIMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYVLLLNIYSSA 449
            + I +M + P  ++W  LLGAC+IH + NL E     L+EL+ +  G +VLL NIY+  
Sbjct: 523 VKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKL 582

Query: 450 GKWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINKQL 509
           GKW+ V+ELRK M+  G+   P C++IE++G++HEF   D +HPM +K+Y +L E+ ++L
Sbjct: 583 GKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKL 642

Query: 510 KIAGYEAEMSSELHRLKPED-KGYALSNHSEKLAIAFGVLATPPGRTIRVANNIRTCMDC 559
           K  GYE E+S  L  ++ E+ K  +L+ HSEKLAI +G+++T   + IRV  N+R C DC
Sbjct: 643 KSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDC 702

[Close]

BLAST of IVF0007357 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 1.9e-109
Identity = 229/610 (37.54%), Postives = 332/610 (54.43%), Query Frame = 0


Query: 9   SILSLISLIKSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFLTRTASAPFRD-LGYSRRFL 68
           ++   +S ++ C+ + +L QIHA +++T  +QD     +FL+   S+   D L Y++   
Sbjct: 13  NLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVF 72

Query: 69  DLLTNPLVSHYNAMLRAYSVS-HMERQGVRADPLSSSFA----------VKSCIKLLSLL 128
           D    P    +N M+R +S S   ER  +    +  S A          +K+C  L +  
Sbjct: 73  DGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFE 132

Query: 129 FGIQIHARIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWN------- 188
              QIHA+I   G++ D   + S+++ Y+  G  + A  LFD +P+ D V+WN       
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192

Query: 189 ------------------------VLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTC 248
                                    +IS   +    ++AL LF  MQ+     +PD V+ 
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSD--VEPDNVSL 252

Query: 249 LLLLQACADLNALEFGERIHGYIQQHCYNTES-----------NC-----AYEVFDKMPE 308
              L ACA L ALE G+ IH Y+ +     +S            C     A EVF  + +
Sbjct: 253 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 312

Query: 309 KNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPDDHTFTAVLSACSHCGLVDEGMAF 368
           K+V +W+A+ISG + +GHGREAI  F EMQK G++P+  TFTAVL+ACS+ GLV+EG   
Sbjct: 313 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 372

Query: 369 FDRMRQELMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHG 428
           F  M ++  + P + HYGCIVDLLGRAG+LD+A   I  M ++P+A +W  LL ACRIH 
Sbjct: 373 FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHK 432

Query: 429 HANLGERIVEHLIELKSQEAGDYVLLLNIYSSAGKWDKVTELRKLMKEKGIYTTPCCTTI 488
           +  LGE I E LI +     G YV   NI++   KWDK  E R+LMKE+G+   P C+TI
Sbjct: 433 NIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 492

Query: 489 ELNGVVHEFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLKPEDKGYAL-S 548
            L G  HEF   D SHP  +KI  +   + ++L+  GY  E+   L  L  +D+  A+  
Sbjct: 493 SLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVH 552

Query: 549 NHSEKLAIAFGVLATPPGRTIRVANNIRTCMDCHNFAKYISSVYNRKVVLRDRSRFHHFQ 559
            HSEKLAI +G++ T PG  IR+  N+R C DCH   K IS +Y R +V+RDR+RFHHF+
Sbjct: 553 QHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFR 612

[Close]

BLAST of IVF0007357 vs. ExPASy TrEMBL
Match: A0A1S3BV40 (pentatricopeptide repeat-containing protein At3g47530 OS=Cucumis melo OX=3656 GN=LOC103493993 PE=3 SV=1)

HSP 1 Score: 1120.1 bits (2896), Expect = 0.0e+00
Identity = 556/585 (95.04%), Postives = 556/585 (95.04%), Query Frame = 0


Query: 1   MYVIFHRPSILSLISLIKSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFLTRTASAPFRDL 60
           MYVIFHRPSILSLISLIKSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFLTRTASAPFRDL
Sbjct: 1   MYVIFHRPSILSLISLIKSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFLTRTASAPFRDL 60

Query: 61  GYSRRFLDLLTNPLVSHYNAMLRAYSVSH-----------MERQGVRADPLSSSFAVKSC 120
           GYSRRFLDLLTNPLVSHYNAMLRAYSVS            MERQGVRADPLSSSFAVKSC
Sbjct: 61  GYSRRFLDLLTNPLVSHYNAMLRAYSVSRSPLEGLYVYRDMERQGVRADPLSSSFAVKSC 120

Query: 121 IKLLSLLFGIQIHARIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWN 180
           IKLLSLLFGIQIHARIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWN
Sbjct: 121 IKLLSLLFGIQIHARIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWN 180

Query: 181 VLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQ 240
           VLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQ
Sbjct: 181 VLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQ 240

Query: 241 QHCYNTESNC----------------AYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIE 300
           QHCYNTESN                 AYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIE
Sbjct: 241 QHCYNTESNLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIE 300

Query: 301 AFWEMQKNGVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLL 360
           AFWEMQKNGVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLL
Sbjct: 301 AFWEMQKNGVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLL 360

Query: 361 GRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYV 420
           GRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYV
Sbjct: 361 GRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYV 420

Query: 421 LLLNIYSSAGKWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYK 480
           LLLNIYSSAGKWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYK
Sbjct: 421 LLLNIYSSAGKWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYK 480

Query: 481 QLDEINKQLKIAGYEAEMSSELHRLKPEDKGYALSNHSEKLAIAFGVLATPPGRTIRVAN 540
           QLDEINKQLKIAGYEAEMSSELHRLKPEDKGYALSNHSEKLAIAFGVLATPPGRTIRVAN
Sbjct: 481 QLDEINKQLKIAGYEAEMSSELHRLKPEDKGYALSNHSEKLAIAFGVLATPPGRTIRVAN 540

Query: 541 NIRTCMDCHNFAKYISSVYNRKVVLRDRSRFHHFQEGRCSCNDFW 559
           NIRTCMDCHNFAKYISSVYNRKVVLRDRSRFHHFQEGRCSCNDFW
Sbjct: 541 NIRTCMDCHNFAKYISSVYNRKVVLRDRSRFHHFQEGRCSCNDFW 585

[Close]

BLAST of IVF0007357 vs. ExPASy TrEMBL
Match: A0A0A0LUH9 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009750 PE=3 SV=1)

HSP 1 Score: 1067.0 bits (2758), Expect = 2.7e-308
Identity = 536/602 (89.04%), Postives = 542/602 (90.03%), Query Frame = 0


Query: 1   MYVIFHRPSILS-----------------LISLIKSCTHKSQLLQIHAHIIRTSSIQDPI 60
           M VIF  PSILS                 LISLIKSCTHKSQLLQIHAHII TSSIQDPI
Sbjct: 1   MCVIFRSPSILSLKYHHHSISFSHFEREPLISLIKSCTHKSQLLQIHAHIITTSSIQDPI 60

Query: 61  VSLRFLTRTASAPFRDLGYSRRFLDLLTNPLVSHYNAMLRAYSVSH-----------MER 120
           VSLRFLTRTASAPFRDLGYSRR  DLLTNP VSHYNAMLRAYS+S            MER
Sbjct: 61  VSLRFLTRTASAPFRDLGYSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMER 120

Query: 121 QGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFIYGHQADSLLLTSMMDLYSHCGKPEE 180
           QGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFI GHQADSLLLTSMMDLYSHCGKPEE
Sbjct: 121 QGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFINGHQADSLLLTSMMDLYSHCGKPEE 180

Query: 181 ACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQAC 240
           ACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQAC
Sbjct: 181 ACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQAC 240

Query: 241 ADLNALEFGERIHGYIQQHCYNTESNC----------------AYEVFDKMPEKNVVSWS 300
           ADLNALEFGERIHGYIQQH YNTESN                 AYEVFDKM EKNVVSWS
Sbjct: 241 ADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWS 300

Query: 301 AMISGLSMNGHGREAIEAFWEMQKNGVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQE 360
           AMISGLSMNGHGREAIEAFWEMQKNGVEP DHTFTAVLSACSHCGLVDEGMAFFDRMRQE
Sbjct: 301 AMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQE 360

Query: 361 LMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHANLGER 420
            MIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGH NLGER
Sbjct: 361 FMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGER 420

Query: 421 IVEHLIELKSQEAGDYVLLLNIYSSAGKWDKVTELRKLMKEKGIYTTPCCTTIELNGVVH 480
           IVEHLIELKSQEAGDYVLLLNIYSSAG WDKVTELRKLMKEKGIYTTPCCTTIELNGVVH
Sbjct: 421 IVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVH 480

Query: 481 EFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLKPEDKGYALSNHSEKLAI 540
           +FAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRL+P+DKGYALSNHSEKLAI
Sbjct: 481 QFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLAI 540

Query: 541 AFGVLATPPGRTIRVANNIRTCMDCHNFAKYISSVYNRKVVLRDRSRFHHFQEGRCSCND 559
           AFGVLATPPGRTIR+ANNIRTCMDCHNFAKYISSVYNRKVV+RDRSRFHHFQEGRCSCND
Sbjct: 541 AFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCND 600

[Close]

BLAST of IVF0007357 vs. ExPASy TrEMBL
Match: A0A6J1E1Z3 (pentatricopeptide repeat-containing protein At3g47530 OS=Cucurbita moschata OX=3662 GN=LOC111429841 PE=3 SV=1)

HSP 1 Score: 998.0 bits (2579), Expect = 1.5e-287
Identity = 489/573 (85.34%), Postives = 515/573 (89.88%), Query Frame = 0


Query: 13  LISLIKSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFLTRTASAPFRDLGYSRRFLDLLTN 72
           LISLIKSCTHKSQLLQIHAH+IRTS IQDPIVSLRFLTR  SAPFR+LGYSRRF   LTN
Sbjct: 56  LISLIKSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTN 115

Query: 73  PLVSHYNAMLRAYSVSH-----------MERQGVRADPLSSSFAVKSCIKLLSLLFGIQI 132
           P VSHYN +LRAYS+S            MER+GV ADPLSSSFAVKSCI++LSL  G+QI
Sbjct: 116 PFVSHYNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQI 175

Query: 133 HARIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRT 192
           HARIF  GHQ+DSLLLTSMMDLYSHCGK E+ACKLFDE+PQ+DVVAWNVLISCLTRNKRT
Sbjct: 176 HARIFRNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRT 235

Query: 193 RDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHCYNTESNC-- 252
           RDALGLFEIMQSPTYLC+PDKVTCLLLLQACADLNALEFGERIH +IQQH YNTESN   
Sbjct: 236 RDALGLFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCN 295

Query: 253 --------------AYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEP 312
                         AYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFW MQK GVEP
Sbjct: 296 SLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEP 355

Query: 313 DDHTFTAVLSACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLLGRAGMLDQAYEL 372
           DDHTFTAVLSACSHCGLVDEGMAFFDRMRQE MI P VHHYGC+VDLLGRAGMLDQAY+L
Sbjct: 356 DDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQL 415

Query: 373 IMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYVLLLNIYSSAGKW 432
           +MSMEV PDATMWRTLLGACRIHGHANLGERI+EHLIELKSQEAGDYVLLLNIYSSAG W
Sbjct: 416 VMSMEVNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNW 475

Query: 433 DKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINKQLKIA 492
            KVTELRK MKE+GIYTTP CTTIELNGVVHEFAVDDISHPMKDKIY+QLDEINKQLKIA
Sbjct: 476 VKVTELRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIA 535

Query: 493 GYEAEMSSELHRLKPEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNIRTCMDCHNFA 552
           GYEAE+SSELH LK EDKGYALS HSEKLAIAFGVLATPPGRTIRVANN+RTCMDCHNFA
Sbjct: 536 GYEAEISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFA 595

Query: 553 KYISSVYNRKVVLRDRSRFHHFQEGRCSCNDFW 559
           KY+SSVYNRKVV+RDRSRFHHF+EGRCSCND+W
Sbjct: 596 KYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 628

[Close]

BLAST of IVF0007357 vs. ExPASy TrEMBL
Match: A0A6J1JDE8 (pentatricopeptide repeat-containing protein At3g47530 OS=Cucurbita maxima OX=3661 GN=LOC111484807 PE=3 SV=1)

HSP 1 Score: 994.6 bits (2570), Expect = 1.7e-286
Identity = 485/573 (84.64%), Postives = 515/573 (89.88%), Query Frame = 0


Query: 13  LISLIKSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFLTRTASAPFRDLGYSRRFLDLLTN 72
           LISLIKSCTHKSQLLQIHAH+IRTS IQDPIVSLRFLTR  SAPFR+LGYSRRF   LTN
Sbjct: 56  LISLIKSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTN 115

Query: 73  PLVSHYNAMLRAYSVSH-----------MERQGVRADPLSSSFAVKSCIKLLSLLFGIQI 132
           P VSHYN +LRAYS+S            MERQGV ADPLSSSFA+KSCI++LSL  GIQI
Sbjct: 116 PFVSHYNTLLRAYSLSRSPLEGLYMYRDMERQGVHADPLSSSFALKSCIRMLSLFSGIQI 175

Query: 133 HARIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRT 192
           HARIF  GHQ+DSLLLTSMMDLYSHCGK ++ACKLFDE+PQ+DVVAWNVLISCLTRNKRT
Sbjct: 176 HARIFRNGHQSDSLLLTSMMDLYSHCGKLKDACKLFDEIPQRDVVAWNVLISCLTRNKRT 235

Query: 193 RDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHCYNTESNC-- 252
           RDALGLFEIMQSPTYLC+PDKVTCLLLLQACADLNALEFGERIH +IQQH YNTESN   
Sbjct: 236 RDALGLFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCN 295

Query: 253 --------------AYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEP 312
                         AYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFW MQK GVEP
Sbjct: 296 SLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEP 355

Query: 313 DDHTFTAVLSACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLLGRAGMLDQAYEL 372
           DDHTFTAVLSACSHCGLVDEGMAFFDRMRQE MI P VHHYGC+VDLLGRAGMLDQAY+L
Sbjct: 356 DDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQL 415

Query: 373 IMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYVLLLNIYSSAGKW 432
           +MSMEV PDATMWRTLLGACRIHGHANLGER++EHL+ELKSQEAGDYVLLLNIYSSAG W
Sbjct: 416 VMSMEVNPDATMWRTLLGACRIHGHANLGERVIEHLVELKSQEAGDYVLLLNIYSSAGNW 475

Query: 433 DKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINKQLKIA 492
           DKVTELRK MKE+GIYTTP CTTIELNGVVHEFAVDDISHPMKDKIYKQLDEIN+QLKIA
Sbjct: 476 DKVTELRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINQQLKIA 535

Query: 493 GYEAEMSSELHRLKPEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNIRTCMDCHNFA 552
           GYEAE+SSELH LK EDKGYALS HSEKLAIAFGVLATPPG TIRVANN+RTC+DCHNFA
Sbjct: 536 GYEAEISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGGTIRVANNLRTCLDCHNFA 595

Query: 553 KYISSVYNRKVVLRDRSRFHHFQEGRCSCNDFW 559
           KY+SSVYNRKVV+RDRS+FHHF+EGRCSCND+W
Sbjct: 596 KYVSSVYNRKVVVRDRSQFHHFREGRCSCNDYW 628

[Close]

BLAST of IVF0007357 vs. ExPASy TrEMBL
Match: A0A5A7UPZ5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002460 PE=3 SV=1)

HSP 1 Score: 991.5 bits (2562), Expect = 1.4e-285
Identity = 488/517 (94.39%), Postives = 488/517 (94.39%), Query Frame = 0


Query: 69  LLTNPLVSHYNAMLRAYSVSH-----------MERQGVRADPLSSSFAVKSCIKLLSLLF 128
           LLTNPLVSHYNAMLRAYSVS            MERQGVRADPLSSSFAVKSCIKLLSLLF
Sbjct: 218 LLTNPLVSHYNAMLRAYSVSRSPLEGLYVYRDMERQGVRADPLSSSFAVKSCIKLLSLLF 277

Query: 129 GIQIHARIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTR 188
           GIQIHARIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTR
Sbjct: 278 GIQIHARIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTR 337

Query: 189 NKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHCYNTES 248
           NKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHCYNTES
Sbjct: 338 NKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHCYNTES 397

Query: 249 NC----------------AYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKN 308
           N                 AYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKN
Sbjct: 398 NLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKN 457

Query: 309 GVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLLGRAGMLDQ 368
           GVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLLGRAGMLDQ
Sbjct: 458 GVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLLGRAGMLDQ 517

Query: 369 AYELIMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYVLLLNIYSS 428
           AYELIMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYVLLLNIYSS
Sbjct: 518 AYELIMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYVLLLNIYSS 577

Query: 429 AGKWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINKQ 488
           AGKWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINKQ
Sbjct: 578 AGKWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINKQ 637

Query: 489 LKIAGYEAEMSSELHRLKPEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNIRTCMDC 548
           LKIAGYEAEMSSELHRLKPEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNIRTCMDC
Sbjct: 638 LKIAGYEAEMSSELHRLKPEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNIRTCMDC 697

Query: 549 HNFAKYISSVYNRKVVLRDRSRFHHFQEGRCSCNDFW 559
           HNFAKYISSVYNRKVVLRDRSRFHHFQEGRCSCNDFW
Sbjct: 698 HNFAKYISSVYNRKVVLRDRSRFHHFQEGRCSCNDFW 734

[Close]

BLAST of IVF0007357 vs. NCBI nr
Match: XP_008453206.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g47530 [Cucumis melo])

HSP 1 Score: 1116 bits (2886), Expect = 0.0
Identity = 556/585 (95.04%), Postives = 556/585 (95.04%), Query Frame = 0


Query: 1   MYVIFHRPSILSLISLIKSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFLTRTASAPFRDL 60
           MYVIFHRPSILSLISLIKSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFLTRTASAPFRDL
Sbjct: 1   MYVIFHRPSILSLISLIKSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFLTRTASAPFRDL 60

Query: 61  GYSRRFLDLLTNPLVSHYNAMLRAYSVSH-----------MERQGVRADPLSSSFAVKSC 120
           GYSRRFLDLLTNPLVSHYNAMLRAYSVS            MERQGVRADPLSSSFAVKSC
Sbjct: 61  GYSRRFLDLLTNPLVSHYNAMLRAYSVSRSPLEGLYVYRDMERQGVRADPLSSSFAVKSC 120

Query: 121 IKLLSLLFGIQIHARIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWN 180
           IKLLSLLFGIQIHARIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWN
Sbjct: 121 IKLLSLLFGIQIHARIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWN 180

Query: 181 VLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQ 240
           VLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQ
Sbjct: 181 VLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQ 240

Query: 241 QHCYNTESNC----------------AYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIE 300
           QHCYNTESN                 AYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIE
Sbjct: 241 QHCYNTESNLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIE 300

Query: 301 AFWEMQKNGVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLL 360
           AFWEMQKNGVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLL
Sbjct: 301 AFWEMQKNGVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLL 360

Query: 361 GRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYV 420
           GRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYV
Sbjct: 361 GRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYV 420

Query: 421 LLLNIYSSAGKWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYK 480
           LLLNIYSSAGKWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYK
Sbjct: 421 LLLNIYSSAGKWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYK 480

Query: 481 QLDEINKQLKIAGYEAEMSSELHRLKPEDKGYALSNHSEKLAIAFGVLATPPGRTIRVAN 540
           QLDEINKQLKIAGYEAEMSSELHRLKPEDKGYALSNHSEKLAIAFGVLATPPGRTIRVAN
Sbjct: 481 QLDEINKQLKIAGYEAEMSSELHRLKPEDKGYALSNHSEKLAIAFGVLATPPGRTIRVAN 540

Query: 541 NIRTCMDCHNFAKYISSVYNRKVVLRDRSRFHHFQEGRCSCNDFW 558
           NIRTCMDCHNFAKYISSVYNRKVVLRDRSRFHHFQEGRCSCNDFW
Sbjct: 541 NIRTCMDCHNFAKYISSVYNRKVVLRDRSRFHHFQEGRCSCNDFW 585

[Close]

BLAST of IVF0007357 vs. NCBI nr
Match: XP_011660092.1 (pentatricopeptide repeat-containing protein At3g47530 [Cucumis sativus] >KGN63671.1 hypothetical protein Csa_013464 [Cucumis sativus])

HSP 1 Score: 1063 bits (2748), Expect = 0.0
Identity = 536/602 (89.04%), Postives = 542/602 (90.03%), Query Frame = 0


Query: 1   MYVIFHRPSILSL-----------------ISLIKSCTHKSQLLQIHAHIIRTSSIQDPI 60
           M VIF  PSILSL                 ISLIKSCTHKSQLLQIHAHII TSSIQDPI
Sbjct: 1   MCVIFRSPSILSLKYHHHSISFSHFEREPLISLIKSCTHKSQLLQIHAHIITTSSIQDPI 60

Query: 61  VSLRFLTRTASAPFRDLGYSRRFLDLLTNPLVSHYNAMLRAYSVSH-----------MER 120
           VSLRFLTRTASAPFRDLGYSRR  DLLTNP VSHYNAMLRAYS+S            MER
Sbjct: 61  VSLRFLTRTASAPFRDLGYSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMER 120

Query: 121 QGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFIYGHQADSLLLTSMMDLYSHCGKPEE 180
           QGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFI GHQADSLLLTSMMDLYSHCGKPEE
Sbjct: 121 QGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFINGHQADSLLLTSMMDLYSHCGKPEE 180

Query: 181 ACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQAC 240
           ACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQAC
Sbjct: 181 ACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQAC 240

Query: 241 ADLNALEFGERIHGYIQQHCYNTESNC----------------AYEVFDKMPEKNVVSWS 300
           ADLNALEFGERIHGYIQQH YNTESN                 AYEVFDKM EKNVVSWS
Sbjct: 241 ADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWS 300

Query: 301 AMISGLSMNGHGREAIEAFWEMQKNGVEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQE 360
           AMISGLSMNGHGREAIEAFWEMQKNGVEP DHTFTAVLSACSHCGLVDEGMAFFDRMRQE
Sbjct: 301 AMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQE 360

Query: 361 LMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHANLGER 420
            MIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGH NLGER
Sbjct: 361 FMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGER 420

Query: 421 IVEHLIELKSQEAGDYVLLLNIYSSAGKWDKVTELRKLMKEKGIYTTPCCTTIELNGVVH 480
           IVEHLIELKSQEAGDYVLLLNIYSSAG WDKVTELRKLMKEKGIYTTPCCTTIELNGVVH
Sbjct: 421 IVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVH 480

Query: 481 EFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLKPEDKGYALSNHSEKLAI 540
           +FAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRL+P+DKGYALSNHSEKLAI
Sbjct: 481 QFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLAI 540

Query: 541 AFGVLATPPGRTIRVANNIRTCMDCHNFAKYISSVYNRKVVLRDRSRFHHFQEGRCSCND 558
           AFGVLATPPGRTIR+ANNIRTCMDCHNFAKYISSVYNRKVV+RDRSRFHHFQEGRCSCND
Sbjct: 541 AFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCND 600

[Close]

BLAST of IVF0007357 vs. NCBI nr
Match: XP_023515406.1 (pentatricopeptide repeat-containing protein At3g47530 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 999 bits (2582), Expect = 0.0
Identity = 492/573 (85.86%), Postives = 516/573 (90.05%), Query Frame = 0


Query: 13  LISLIKSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFLTRTASAPFRDLGYSRRFLDLLTN 72
           LISLIKSCTHKSQLLQIHAH+IRTS IQDPIVSLRFLTR  SAPFR+LGYSRRF   LTN
Sbjct: 56  LISLIKSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTN 115

Query: 73  PLVSHYNAMLRAYSVSH-----------MERQGVRADPLSSSFAVKSCIKLLSLLFGIQI 132
           P VSHYN +LRAYS+S            MERQGV ADPLSSSFAVKSCI++LSL  GIQI
Sbjct: 116 PFVSHYNTLLRAYSLSRSPLEGLYMYRDMERQGVHADPLSSSFAVKSCIRMLSLFSGIQI 175

Query: 133 HARIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRT 192
           HARIF  GHQ+DSLLLTSMMDLYSHCGK E+ACKLFDE+PQ+DVVAWNVLISCLTRNKRT
Sbjct: 176 HARIFRNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRT 235

Query: 193 RDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHCYNTESNC-- 252
           RDALGLFEIMQSPTYLC+PDKVTCLLLLQACADLNALEFGERIH YIQQ+ YNTESN   
Sbjct: 236 RDALGLFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSYIQQNDYNTESNLCN 295

Query: 253 --------------AYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEP 312
                         AYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFW MQK GVEP
Sbjct: 296 SLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEP 355

Query: 313 DDHTFTAVLSACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLLGRAGMLDQAYEL 372
           DDHTFTAVLSACSHCGLVDEGMAFFDRMRQE MI P VHHYGC+VDLLGRAGMLDQAY+L
Sbjct: 356 DDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQL 415

Query: 373 IMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYVLLLNIYSSAGKW 432
           +MSMEV PDATMWRTLLGACRIHGHANLGERI+EHLIELKSQEAGDYVLLLNIYSSAG W
Sbjct: 416 VMSMEVNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNW 475

Query: 433 DKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINKQLKIA 492
           DKVTELRK MKE+GIYTTP CTTIELNGVVHEFAVDDISHPMKDKIYKQLDEIN+QLKIA
Sbjct: 476 DKVTELRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINQQLKIA 535

Query: 493 GYEAEMSSELHRLKPEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNIRTCMDCHNFA 552
           GYEAE+SSELH LK EDKGYALS HSEKLAIAFGVLATPPGRTIRVANN+RTCMDCHNFA
Sbjct: 536 GYEAEISSELHNLKAEDKGYALSYHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFA 595

Query: 553 KYISSVYNRKVVLRDRSRFHHFQEGRCSCNDFW 558
           KY+SSVYNRKVV+RDRSRFHHF+EGRCSCND+W
Sbjct: 596 KYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 628

[Close]

BLAST of IVF0007357 vs. NCBI nr
Match: XP_038879600.1 (pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida] >XP_038879601.1 pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida] >XP_038879603.1 pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida] >XP_038879604.1 pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida] >XP_038879605.1 pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida] >XP_038879606.1 pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida] >XP_038879607.1 pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida])

HSP 1 Score: 998 bits (2581), Expect = 0.0
Identity = 490/573 (85.51%), Postives = 518/573 (90.40%), Query Frame = 0


Query: 13  LISLIKSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFLTRTASAPFRDLGYSRRFLDLLTN 72
           LISLIKSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFLTRTASAPFRDLGYSRRF  LLTN
Sbjct: 44  LISLIKSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFLTRTASAPFRDLGYSRRFFSLLTN 103

Query: 73  PLVSHYNAMLRAYSVS-----------HMERQGVRADPLSSSFAVKSCIKLLSLLFGIQI 132
           P VSHYNAMLRAYS+S            MERQGVR DPLSSSFAVKSCI++LSL  G+QI
Sbjct: 104 PFVSHYNAMLRAYSLSPSPLKGLYMYRDMERQGVRVDPLSSSFAVKSCIRMLSLFSGVQI 163

Query: 133 HARIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRT 192
           HA+IF  GHQ+DSLLLTSMMDLYSHCGK E+ACKLFDE+PQ+DV+AWNVLISCLTRNKRT
Sbjct: 164 HAKIFRNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVIAWNVLISCLTRNKRT 223

Query: 193 RDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHCYNTESNC-- 252
           RDALGLF+IMQSPTYLC+PDKVTCLLLLQACADLNALEFGERIH Y+QQH YNTESN   
Sbjct: 224 RDALGLFDIMQSPTYLCEPDKVTCLLLLQACADLNALEFGERIHNYVQQHGYNTESNLCN 283

Query: 253 --------------AYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEP 312
                         AYEVFDKMPEK+VVSWSAMISGLSMNG GREAIEAFWEMQK G+EP
Sbjct: 284 SLISMYSLCGRVDKAYEVFDKMPEKDVVSWSAMISGLSMNGQGREAIEAFWEMQKKGIEP 343

Query: 313 DDHTFTAVLSACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLLGRAGMLDQAYEL 372
           DDHTFTAVLSACSHCGLVDEGMAFFDRMRQE  I PNV+HYGC+VDLLGR GMLDQAY+L
Sbjct: 344 DDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFRIVPNVYHYGCMVDLLGRTGMLDQAYKL 403

Query: 373 IMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYVLLLNIYSSAGKW 432
           IMSMEV PDAT+WRTLLGACRIHGHANLGERI+EHLIELKSQEAGDYVLLLNIYSSAG W
Sbjct: 404 IMSMEVNPDATLWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNW 463

Query: 433 DKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINKQLKIA 492
           DKV+ELRK MKEKGIYTTP CTTIELNGVVHEFAVDDISHPMKDKIY++LDEINKQLKIA
Sbjct: 464 DKVSELRKFMKEKGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEKLDEINKQLKIA 523

Query: 493 GYEAEMSSELHRLKPEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNIRTCMDCHNFA 552
           GYEAE+SSELHRLK EDKGYALSNHSEKLAIAFGVLATPPGRTIRVAN +  CMDCHNFA
Sbjct: 524 GYEAEISSELHRLKAEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANTVHICMDCHNFA 583

Query: 553 KYISSVYNRKVVLRDRSRFHHFQEGRCSCNDFW 558
           KYISSVYNRKVV+RDRSR HHF+EGRCSCND+W
Sbjct: 584 KYISSVYNRKVVVRDRSRSHHFREGRCSCNDYW 616

[Close]

BLAST of IVF0007357 vs. NCBI nr
Match: KAG6589508.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023195.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 997 bits (2578), Expect = 0.0
Identity = 489/573 (85.34%), Postives = 516/573 (90.05%), Query Frame = 0


Query: 13  LISLIKSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFLTRTASAPFRDLGYSRRFLDLLTN 72
           LISLIKSCTHKSQLLQIHAH+IRTS IQDPIVSLRFLTR  SAPFR+LGYSRRF   LTN
Sbjct: 56  LISLIKSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTN 115

Query: 73  PLVSHYNAMLRAYSVSH-----------MERQGVRADPLSSSFAVKSCIKLLSLLFGIQI 132
           P VSHYN +LRAYS+S            MER+GV ADPLSSSFAVKSCI++LSL  G+QI
Sbjct: 116 PFVSHYNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQI 175

Query: 133 HARIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRT 192
           HARIF  GHQ+DSLLLTSMMDLYSHCGK E+ACKLFDE+PQ+DVVAWNVLISCLTRNKRT
Sbjct: 176 HARIFRNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRT 235

Query: 193 RDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHCYNTESNC-- 252
           RDALGLFEIMQSPTYLC+PDKVTCLLLLQACADLNALEFGERIH +IQQH YNTESN   
Sbjct: 236 RDALGLFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCN 295

Query: 253 --------------AYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEP 312
                         AYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFW MQK GVEP
Sbjct: 296 SLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEP 355

Query: 313 DDHTFTAVLSACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLLGRAGMLDQAYEL 372
           DDHTFTAVLSACSHCGLVDEGMAFFDRMRQE MI P VHHYGC+VDLLGRAGMLDQAY+L
Sbjct: 356 DDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQL 415

Query: 373 IMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYVLLLNIYSSAGKW 432
           +MSMEV PDATMWRTLLGACRIHGHANLGERI+EHLIELKSQEAGDYVLLLNIYSSAG W
Sbjct: 416 VMSMEVNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNW 475

Query: 433 DKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINKQLKIA 492
           DKVTELRK MKE+GIYTTP CTTIELNGVVHEFAVDDISHPMKDKIY+QLDEINKQLKIA
Sbjct: 476 DKVTELRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIA 535

Query: 493 GYEAEMSSELHRLKPEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNIRTCMDCHNFA 552
           GYEAE+SSELH LK EDKGYALS HSEKLAIAFG+LATPPGRTIRVANN+RTCMDCHNFA
Sbjct: 536 GYEAEISSELHNLKAEDKGYALSYHSEKLAIAFGILATPPGRTIRVANNLRTCMDCHNFA 595

Query: 553 KYISSVYNRKVVLRDRSRFHHFQEGRCSCNDFW 558
           KY+SSVYNRKVV+RDRSRFHHF+EGRCSCND+W
Sbjct: 596 KYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 628

[Close]

BLAST of IVF0007357 vs. TAIR 10
Match: AT3G47530.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 674.1 bits (1738), Expect = 9.7e-194
Identity = 343/578 (59.34%), Postives = 426/578 (73.70%), Query Frame = 0


Query: 13  LISLIKSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFLTRTA-SAPFRDLGYSRRFLDLLT 72
           L+SLI S T K  L QIHA ++RTS I++  V   FL+R A S   RD+ YS R      
Sbjct: 14  LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRL 73

Query: 73  NPLVSHYNAMLRAYSVSHMERQGVR------------ADPLSSSFAVKSCIKLLSLLFGI 132
           NP +SH N M+RA+S+S    +G R            A+PLSSSFA+K CIK   LL G+
Sbjct: 74  NPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGL 133

Query: 133 QIHARIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNK 192
           QIH +IF  G  +DSLL+T++MDLYS C    +ACK+FDE+P++D V+WNVL SC  RNK
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNK 193

Query: 193 RTRDALGLFEIMQSPTYLC-QPDKVTCLLLLQACADLNALEFGERIHGYIQQH------- 252
           RTRD L LF+ M++    C +PD VTCLL LQACA+L AL+FG+++H +I ++       
Sbjct: 194 RTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALN 253

Query: 253 ----CYNTESNC-----AYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNG 312
                 +  S C     AY+VF  M E+NVVSW+A+ISGL+MNG G+EAIEAF EM K G
Sbjct: 254 LSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG 313

Query: 313 VEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQ-ELMIAPNVHHYGCIVDLLGRAGMLDQ 372
           + P++ T T +LSACSH GLV EGM FFDRMR  E  I PN+HHYGC+VDLLGRA +LD+
Sbjct: 314 ISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDK 373

Query: 373 AYELIMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYVLLLNIYSS 432
           AY LI SME++PD+T+WRTLLGACR+HG   LGER++ HLIELK++EAGDYVLLLN YS+
Sbjct: 374 AYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYST 433

Query: 433 AGKWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINKQ 492
            GKW+KVTELR LMKEK I+T P C+ IEL G VHEF VDD+SHP K++IYK L EIN+Q
Sbjct: 434 VGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQ 493

Query: 493 LKIAGYEAEMSSELHRLK-PEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNIRTCMD 552
           LKIAGY AE++SELH L+  E+KGYAL  HSEKLAIAFG+L TPPG TIRV  N+RTC+D
Sbjct: 494 LKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVD 553

Query: 553 CHNFAKYISSVYNRKVVLRDRSRFHHFQEGRCSCNDFW 559
           CHNFAK++S VY+R V++RDRSRFHHF+ G CSCNDFW
Sbjct: 554 CHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591

[Close]

BLAST of IVF0007357 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 404.8 bits (1039), Expect = 1.1e-112
Identity = 201/514 (39.11%), Postives = 308/514 (59.92%), Query Frame = 0


Query: 75  VSHYNAMLRAYS-----------VSHMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHA 134
           V  +NAM+  Y+              M +  VR D  +    V +C +  S+  G Q+H 
Sbjct: 231 VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHL 290

Query: 135 RIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRD 194
            I  +G  ++  ++ +++DLYS CG+ E AC LF+ +P KDV++WN LI   T     ++
Sbjct: 291 WIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKE 350

Query: 195 ALGLF-EIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHCYNT------- 254
           AL LF E+++S      P+ VT L +L ACA L A++ G  IH YI +            
Sbjct: 351 ALLLFQEMLRSGE---TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 410

Query: 255 -----------ESNCAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVE 314
                      +   A++VF+ +  K++ SW+AMI G +M+G    + + F  M+K G++
Sbjct: 411 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 470

Query: 315 PDDHTFTAVLSACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLLGRAGMLDQAYE 374
           PDD TF  +LSACSH G++D G   F  M Q+  + P + HYGC++DLLG +G+  +A E
Sbjct: 471 PDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 530

Query: 375 LIMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYVLLLNIYSSAGK 434
           +I  ME+ PD  +W +LL AC++HG+  LGE   E+LI+++ +  G YVLL NIY+SAG+
Sbjct: 531 MINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGR 590

Query: 435 WDKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINKQLKI 494
           W++V + R L+ +KG+   P C++IE++ VVHEF + D  HP   +IY  L+E+   L+ 
Sbjct: 591 WNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 650

Query: 495 AGYEAEMSSELHRLKPEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNIRTCMDCHNF 554
           AG+  + S  L  ++ E K  AL +HSEKLAIAFG+++T PG  + +  N+R C +CH  
Sbjct: 651 AGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEA 710

Query: 555 AKYISSVYNRKVVLRDRSRFHHFQEGRCSCNDFW 559
            K IS +Y R+++ RDR+RFHHF++G CSCND+W
Sbjct: 711 TKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

[Close]

BLAST of IVF0007357 vs. TAIR 10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 398.3 bits (1022), Expect = 1.0e-110
Identity = 217/624 (34.78%), Postives = 340/624 (54.49%), Query Frame = 0


Query: 12  SLISLIKSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFL--TRTASAPFRDLGYSRRFLDL 71
           SL   I +C     L QIHA  I++  ++D + +   L    T+    RDL Y+ +  + 
Sbjct: 25  SLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQ 84

Query: 72  LTNPLVSHYNAMLRAYSVSH--------------MERQGVRADPLSSSFAVKSCIKLLSL 131
           +       +N ++R +S S               M  + V  +  +    +K+C K   +
Sbjct: 85  MPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKI 144

Query: 132 LFGIQIHARIFIYGHQADSLLLTSMMDLYSHCGKPEEA---------------------- 191
             G QIH     YG   D  ++++++ +Y  CG  ++A                      
Sbjct: 145 QEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKR 204

Query: 192 -------------------CK----LFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEI 251
                              CK    LFD++ Q+ VV+WN +IS  + N   +DA+ +F  
Sbjct: 205 DGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFRE 264

Query: 252 MQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHCYNTE-----------SNC 311
           M+      +P+ VT + +L A + L +LE GE +H Y +      +           S C
Sbjct: 265 MKKGD--IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKC 324

Query: 312 -----AYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPDDHTFTAVL 371
                A  VF+++P +NV++WSAMI+G +++G   +AI+ F +M++ GV P D  +  +L
Sbjct: 325 GIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLL 384

Query: 372 SACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPD 431
           +ACSH GLV+EG  +F +M     + P + HYGC+VDLLGR+G+LD+A E I++M ++PD
Sbjct: 385 TACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPD 444

Query: 432 ATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYVLLLNIYSSAGKWDKVTELRKL 491
             +W+ LLGACR+ G+  +G+R+   L+++   ++G YV L N+Y+S G W +V+E+R  
Sbjct: 445 DVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLR 504

Query: 492 MKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSE 551
           MKEK I   P C+ I+++GV+HEF V+D SHP   +I   L EI+ +L++AGY    +  
Sbjct: 505 MKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQV 564

Query: 552 LHRLKPEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNIRTCMDCHNFAKYISSVYNR 559
           L  L+ EDK   L  HSEK+A AFG+++T PG+ IR+  N+R C DCH+  K IS VY R
Sbjct: 565 LLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKR 624

[Close]

BLAST of IVF0007357 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 397.9 bits (1021), Expect = 1.3e-110
Identity = 205/517 (39.65%), Postives = 310/517 (59.96%), Query Frame = 0


Query: 90  MERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFIYGHQADSLLLTSMMDLYSHCGK 149
           ME + V+A  ++    + +C K+ +L FG Q+ + I       +  L  +M+D+Y+ CG 
Sbjct: 223 MESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGS 282

Query: 150 PEEACKLFD-------------------------------EVPQKDVVAWNVLISCLTRN 209
            E+A +LFD                                +PQKD+VAWN LIS   +N
Sbjct: 283 IEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQN 342

Query: 210 KRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQH------- 269
            +  +AL +F  +Q    + + +++T +  L ACA + ALE G  IH YI++H       
Sbjct: 343 GKPNEALIVFHELQLQKNM-KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFH 402

Query: 270 ----CYNTESNC-----AYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNG 329
                 +  S C     + EVF+ + +++V  WSAMI GL+M+G G EA++ F++MQ+  
Sbjct: 403 VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN 462

Query: 330 VEPDDHTFTAVLSACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLLGRAGMLDQA 389
           V+P+  TFT V  ACSH GLVDE  + F +M     I P   HY CIVD+LGR+G L++A
Sbjct: 463 VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA 522

Query: 390 YELIMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYVLLLNIYSSA 449
            + I +M + P  ++W  LLGAC+IH + NL E     L+EL+ +  G +VLL NIY+  
Sbjct: 523 VKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKL 582

Query: 450 GKWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINKQL 509
           GKW+ V+ELRK M+  G+   P C++IE++G++HEF   D +HPM +K+Y +L E+ ++L
Sbjct: 583 GKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKL 642

Query: 510 KIAGYEAEMSSELHRLKPED-KGYALSNHSEKLAIAFGVLATPPGRTIRVANNIRTCMDC 559
           K  GYE E+S  L  ++ E+ K  +L+ HSEKLAI +G+++T   + IRV  N+R C DC
Sbjct: 643 KSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDC 702

[Close]

BLAST of IVF0007357 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 397.9 bits (1021), Expect = 1.3e-110
Identity = 229/610 (37.54%), Postives = 332/610 (54.43%), Query Frame = 0


Query: 9   SILSLISLIKSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFLTRTASAPFRD-LGYSRRFL 68
           ++   +S ++ C+ + +L QIHA +++T  +QD     +FL+   S+   D L Y++   
Sbjct: 13  NLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVF 72

Query: 69  DLLTNPLVSHYNAMLRAYSVS-HMERQGVRADPLSSSFA----------VKSCIKLLSLL 128
           D    P    +N M+R +S S   ER  +    +  S A          +K+C  L +  
Sbjct: 73  DGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFE 132

Query: 129 FGIQIHARIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWN------- 188
              QIHA+I   G++ D   + S+++ Y+  G  + A  LFD +P+ D V+WN       
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192

Query: 189 ------------------------VLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTC 248
                                    +IS   +    ++AL LF  MQ+     +PD V+ 
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSD--VEPDNVSL 252

Query: 249 LLLLQACADLNALEFGERIHGYIQQHCYNTES-----------NC-----AYEVFDKMPE 308
              L ACA L ALE G+ IH Y+ +     +S            C     A EVF  + +
Sbjct: 253 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 312

Query: 309 KNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPDDHTFTAVLSACSHCGLVDEGMAF 368
           K+V +W+A+ISG + +GHGREAI  F EMQK G++P+  TFTAVL+ACS+ GLV+EG   
Sbjct: 313 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 372

Query: 369 FDRMRQELMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHG 428
           F  M ++  + P + HYGCIVDLLGRAG+LD+A   I  M ++P+A +W  LL ACRIH 
Sbjct: 373 FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHK 432

Query: 429 HANLGERIVEHLIELKSQEAGDYVLLLNIYSSAGKWDKVTELRKLMKEKGIYTTPCCTTI 488
           +  LGE I E LI +     G YV   NI++   KWDK  E R+LMKE+G+   P C+TI
Sbjct: 433 NIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 492

Query: 489 ELNGVVHEFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLKPEDKGYAL-S 548
            L G  HEF   D SHP  +KI  +   + ++L+  GY  E+   L  L  +D+  A+  
Sbjct: 493 SLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVH 552

Query: 549 NHSEKLAIAFGVLATPPGRTIRVANNIRTCMDCHNFAKYISSVYNRKVVLRDRSRFHHFQ 559
            HSEKLAI +G++ T PG  IR+  N+R C DCH   K IS +Y R +V+RDR+RFHHF+
Sbjct: 553 QHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFR 612

The following BLAST results are available for this feature:

BLAST of IVF0007357 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SN85	1.4e-192	59.34	Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana OX...	[more]
Q9LN01	1.5e-111	39.11	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9FI80	1.4e-109	34.78	Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX...	[more]
O82380	1.9e-109	39.65	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
Q9FJY7	1.9e-109	37.54	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]

BLAST of IVF0007357 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BV40	0.0e+00	95.04	pentatricopeptide repeat-containing protein At3g47530 OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0LUH9	2.7e-308	89.04	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G0097...	[more]
A0A6J1E1Z3	1.5e-287	85.34	pentatricopeptide repeat-containing protein At3g47530 OS=Cucurbita moschata OX=3...	[more]
A0A6J1JDE8	1.7e-286	84.64	pentatricopeptide repeat-containing protein At3g47530 OS=Cucurbita maxima OX=366...	[more]
A0A5A7UPZ5	1.4e-285	94.39	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of IVF0007357 vs. NCBI nr


Match Name	Identity	Description
XP_008453206.1	95.04	PREDICTED: pentatricopeptide repeat-containing protein At3g47530 [Cucumis melo]	[more]
XP_011660092.1	89.04	pentatricopeptide repeat-containing protein At3g47530 [Cucumis sativus] >KGN6367...	[more]
XP_023515406.1	85.86	pentatricopeptide repeat-containing protein At3g47530 [Cucurbita pepo subsp. pep...	[more]
XP_038879600.1	85.51	pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida] >...	[more]
KAG6589508.1	85.34	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]

BLAST of IVF0007357 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47530.1	9.7e-194	59.34	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G08070.1	1.1e-112	39.11	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G48910.1	1.0e-110	34.78	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G29760.1	1.3e-110	39.65	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G66520.1	1.3e-110	37.54	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 317..492 e-value: 7.3E-17 score: 63.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 118..224 e-value: 3.9E-19 score: 70.7 coord: 225..316 e-value: 2.0E-23 score: 84.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 325..350 e-value: 0.16 score: 12.2 coord: 392..420 e-value: 0.0015 score: 18.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 163..213 e-value: 4.9E-8 score: 33.1 coord: 250..298 e-value: 3.5E-14 score: 52.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 138..165 e-value: 0.0024 score: 15.9 coord: 288..315 e-value: 3.2E-4 score: 18.7 coord: 253..286 e-value: 1.3E-6 score: 26.2 coord: 166..193 e-value: 8.5E-5 score: 20.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 251..285 score: 12.046526
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 133..167 score: 9.667924
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 286..316 score: 9.602157
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 425..548 e-value: 4.2E-34 score: 117.2
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 10..550
None	No IPR available	PANTHER	PTHR47928:SF63	OS08G0434000 PROTEIN	coord: 10..550

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0007357.2	IVF0007357.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900865	chloroplast RNA modification
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding