IVF0007280 (gene) Melon (IVF77) v1

Overview
NameIVF0007280
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr07: 11658091 .. 11658297 (-)
RNA-Seq ExpressionIVF0007280
SyntenyIVF0007280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGGGGAGAAAGTTTGCTTCCACGCGGAGACCATCAATGAAATATCCAAACTTCTCAATGAGGAAGAATTATACCCTGGCCATAAACTGATAAACATGCCCACTCAAGGTATTGTGAAGAAAATATTGAAGACTACCGTGTGGTCAACGCAGAGTGAGAAAAGATGCCAAGAGGGAGGTTGCAACTTTACCCACATCAATTGA

mRNA sequence

ATGGATGGGGAGAAAGTTTGCTTCCACGCGGAGACCATCAATGAAATATCCAAACTTCTCAATGAGGAAGAATTATACCCTGGCCATAAACTGATAAACATGCCCACTCAAGGTATTGTGAAGAAAATATTGAAGACTACCGTGTGGTCAACGCAGAGTGAGAAAAGATGCCAAGAGGGAGGTTGCAACTTTACCCACATCAATTGA

Coding sequence (CDS)

ATGGATGGGGAGAAAGTTTGCTTCCACGCGGAGACCATCAATGAAATATCCAAACTTCTCAATGAGGAAGAATTATACCCTGGCCATAAACTGATAAACATGCCCACTCAAGGTATTGTGAAGAAAATATTGAAGACTACCGTGTGGTCAACGCAGAGTGAGAAAAGATGCCAAGAGGGAGGTTGCAACTTTACCCACATCAATTGA

Protein sequence

MDGEKVCFHAETINEISKLLNEEELYPGHKLINMPTQGIVKKILKTTVWSTQSEKRCQEGGCNFTHIN
Homology
BLAST of IVF0007280 vs. ExPASy TrEMBL
Match: A0A5A7UMK2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001800 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.2e-06
Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 0

Query: 1   MDGEKVCFHAETINEISKLLNEEELYPGHKLINMPTQGIVKKILKT 47
           +DGE++ F AE INE+    NE ELY G KLIN PT+GIVK++LKT
Sbjct: 59  VDGERISFRAEVINELYGFPNEAELYIGCKLINHPTKGIVKEVLKT 104

BLAST of IVF0007280 vs. ExPASy TrEMBL
Match: A0A5A7U8H4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00470 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.7e-05
Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 0

Query: 1   MDGEKVCFHAETINEISKLLNEEELYPGHKLINMPTQGIVKKILKTTVW 50
           ++ EK+ FHAE IN++  L N+ E YPGH +I  PT+GI K++LKT  W
Sbjct: 62  IESEKIYFHAEAINKLYDLPNDIE-YPGHGIITKPTRGITKEVLKTITW 109

BLAST of IVF0007280 vs. ExPASy TrEMBL
Match: A0A5A7VB23 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1337G00120 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.9e-05
Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 0

Query: 4  EKVCFHAETINEISKLLNEEELYPGHKLINMPTQGIVKKILKTTVW 50
          E+V F  + INE+  L NE E YPGH L N P+QG+ KKILKT  W
Sbjct: 36 EEVSFSVDIINELFGLPNEMEKYPGHMLNNEPSQGLTKKILKTIAW 81

BLAST of IVF0007280 vs. ExPASy TrEMBL
Match: A0A5D3CEC6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757G00370 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.8e-04
Identity = 23/49 (46.94%), Postives = 35/49 (71.43%), Query Frame = 0

Query: 1  MDGEKVCFHAETINEISKLLNEEELYPGHKLINMPTQGIVKKILKTTVW 50
          ++ EKV F AE INE+  L ++E+ YP H+LIN PT+G+V+++L    W
Sbjct: 2  VEREKVAFRAEAINELYGLPDKEDAYPCHQLINKPTEGLVRRMLGVIAW 50

BLAST of IVF0007280 vs. ExPASy TrEMBL
Match: A0A5A7VH86 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G001190 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.3e-04
Identity = 23/49 (46.94%), Postives = 35/49 (71.43%), Query Frame = 0

Query: 1  MDGEKVCFHAETINEISKLLNEEELYPGHKLINMPTQGIVKKILKTTVW 50
          ++ EKV F AE INE+  L ++E+ YP H+LIN PT+G+V+++L    W
Sbjct: 2  VEREKVAFRAEAINELYGLPDKEDAYPCHQLINKPTKGLVRRMLGVIAW 50

BLAST of IVF0007280 vs. NCBI nr
Match: KAA0056424.1 (hypothetical protein E6C27_scaffold186G001800 [Cucumis melo var. makuwa])

HSP 1 Score: 60.5 bits (145), Expect = 8.73e-10
Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 0

Query: 1   MDGEKVCFHAETINEISKLLNEEELYPGHKLINMPTQGIVKKILKT 46
           +DGE++ F AE INE+    NE ELY G KLIN PT+GIVK++LKT
Sbjct: 59  VDGERISFRAEVINELYGFPNEAELYIGCKLINHPTKGIVKEVLKT 104

BLAST of IVF0007280 vs. NCBI nr
Match: KAA0049901.1 (hypothetical protein E6C27_scaffold13G00540 [Cucumis melo var. makuwa] >TYK07644.1 hypothetical protein E5676_scaffold105G00470 [Cucumis melo var. makuwa])

HSP 1 Score: 57.8 bits (138), Expect = 1.17e-08
Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 0

Query: 1   MDGEKVCFHAETINEISKLLNEEELYPGHKLINMPTQGIVKKILKTTVW 49
           ++ EK+ FHAE IN++  L N+ E YPGH +I  PT+GI K++LKT  W
Sbjct: 62  IESEKIYFHAEAINKLYDLPNDIE-YPGHGIITKPTRGITKEVLKTITW 109

BLAST of IVF0007280 vs. NCBI nr
Match: TYK09554.1 (hypothetical protein E5676_scaffold757G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 55.8 bits (133), Expect = 4.95e-08
Identity = 23/49 (46.94%), Postives = 35/49 (71.43%), Query Frame = 0

Query: 1  MDGEKVCFHAETINEISKLLNEEELYPGHKLINMPTQGIVKKILKTTVW 49
          ++ EKV F AE INE+  L ++E+ YP H+LIN PT+G+V+++L    W
Sbjct: 2  VEREKVAFRAEAINELYGLPDKEDAYPCHQLINKPTEGLVRRMLGVIAW 50

BLAST of IVF0007280 vs. NCBI nr
Match: KAA0063105.1 (hypothetical protein E6C27_scaffold1337G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 57.0 bits (136), Expect = 6.90e-08
Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 0

Query: 4  EKVCFHAETINEISKLLNEEELYPGHKLINMPTQGIVKKILKTTVW 49
          E+V F  + INE+  L NE E YPGH L N P+QG+ KKILKT  W
Sbjct: 36 EEVSFSVDIINELFGLPNEMEKYPGHMLNNEPSQGLTKKILKTIAW 81

BLAST of IVF0007280 vs. NCBI nr
Match: KAA0067453.1 (hypothetical protein E6C27_scaffold40G001190 [Cucumis melo var. makuwa])

HSP 1 Score: 55.5 bits (132), Expect = 7.00e-08
Identity = 23/49 (46.94%), Postives = 35/49 (71.43%), Query Frame = 0

Query: 1  MDGEKVCFHAETINEISKLLNEEELYPGHKLINMPTQGIVKKILKTTVW 49
          ++ EKV F AE INE+  L ++E+ YP H+LIN PT+G+V+++L    W
Sbjct: 2  VEREKVAFRAEAINELYGLPDKEDAYPCHQLINKPTKGLVRRMLGVIAW 50

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UMK27.2e-0660.87Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7U8H44.7e-0551.02Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VB237.9e-0556.52Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CEC61.8e-0446.94Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VH862.3e-0446.94Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0056424.18.73e-1060.87hypothetical protein E6C27_scaffold186G001800 [Cucumis melo var. makuwa][more]
KAA0049901.11.17e-0851.02hypothetical protein E6C27_scaffold13G00540 [Cucumis melo var. makuwa] >TYK07644... [more]
TYK09554.14.95e-0846.94hypothetical protein E5676_scaffold757G00370 [Cucumis melo var. makuwa][more]
KAA0063105.16.90e-0856.52hypothetical protein E6C27_scaffold1337G00120 [Cucumis melo var. makuwa][more]
KAA0067453.17.00e-0846.94hypothetical protein E6C27_scaffold40G001190 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0007280.1IVF0007280.1mRNA