IVF0007210 (gene) Melon (IVF77) v1

Overview
NameIVF0007210
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDeoxyhypusine synthase
Locationchr07: 19794094 .. 19794760 (+)
RNA-Seq ExpressionIVF0007210
SyntenyIVF0007210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCTCGTTTCCTTCCTCTCTCACTCTTCTTTTCTTACCTCAGTCACATTCTCAATTCCAAATTCTCCGGCCAACAATCCACGACGGTGGTGGCAACATCGTAATATTCTGCCTGGTATCAATGGGCAATTGTGTTGAAGTATTGTCGAGGCAGCGAGAAGAAGAAGGGACAACGACAACAACGTCAACGAGGGAGATGGAAGAGAAAGAAAAGAAAGGAGGAATGAGAATAAAAGTAGTGTTGAGAAAAGAGGAATTGGAATGGCTAACGGAGCAAATCAAGGAGAAAGGAGGGAAAGGTTTAGAAGAATTGTTGGAAGAAATAGAAAGGGGAAGAAGAGAAAAATTAGAGAATTATTGTAGTATTCAATACAGTAGTGTTTCTTGGAAACCTTCTTTGGAAAGTATTATGGAATGTCCAGAAATTCCCGATCACATGTTCAGATAGAAATTACAGCAACTGATCTATTTGGTAAATCAATTGAGATACACATATATTATTGTTGGAGATGAAGGTGTTTCTTTTTCATCATCCACCTCACTCTCTTTCTCTTGCCTTTCTCCTATCAACTAGATTAATCTTTTTTTTTTCCAAGCCCAGTTTGTAATTATACATTCTGTTCTTATTGGAGACCTTCTTTTCTCAACCTCTTGTGTTTAACCTCTCC

mRNA sequence

CCCTCGTTTCCTTCCTCTCTCACTCTTCTTTTCTTACCTCAGTCACATTCTCAATTCCAAATTCTCCGGCCAACAATCCACGACGGTGGTGGCAACATCGTAATATTCTGCCTGGTATCAATGGGCAATTGTGTTGAAGTATTGTCGAGGCAGCGAGAAGAAGAAGGGACAACGACAACAACGTCAACGAGGGAGATGGAAGAGAAAGAAAAGAAAGGAGGAATGAGAATAAAAGTAGTGTTGAGAAAAGAGGAATTGGAATGGCTAACGGAGCAAATCAAGGAGAAAGGAGGGAAAGGTTTAGAAGAATTGTTGGAAGAAATAGAAAGGGGAAGAAGAGAAAAATTAGAGAATTATTGTAGTATTCAATACAGTAGTGTTTCTTGGAAACCTTCTTTGGAAAGTATTATGGAATGTCCAGAAATTCCCGATCACATGTTCAGATAGAAATTACAGCAACTGATCTATTTGGTAAATCAATTGAGATACACATATATTATTGTTGGAGATGAAGGTGTTTCTTTTTCATCATCCACCTCACTCTCTTTCTCTTGCCTTTCTCCTATCAACTAGATTAATCTTTTTTTTTTCCAAGCCCAGTTTGTAATTATACATTCTGTTCTTATTGGAGACCTTCTTTTCTCAACCTCTTGTGTTTAACCTCTCC

Coding sequence (CDS)

ATGGGCAATTGTGTTGAAGTATTGTCGAGGCAGCGAGAAGAAGAAGGGACAACGACAACAACGTCAACGAGGGAGATGGAAGAGAAAGAAAAGAAAGGAGGAATGAGAATAAAAGTAGTGTTGAGAAAAGAGGAATTGGAATGGCTAACGGAGCAAATCAAGGAGAAAGGAGGGAAAGGTTTAGAAGAATTGTTGGAAGAAATAGAAAGGGGAAGAAGAGAAAAATTAGAGAATTATTGTAGTATTCAATACAGTAGTGTTTCTTGGAAACCTTCTTTGGAAAGTATTATGGAATGTCCAGAAATTCCCGATCACATGTTCAGATAG

Protein sequence

MGNCVEVLSRQREEEGTTTTTSTREMEEKEKKGGMRIKVVLRKEELEWLTEQIKEKGGKGLEELLEEIERGRREKLENYCSIQYSSVSWKPSLESIMECPEIPDHMFR
Homology
BLAST of IVF0007210 vs. ExPASy TrEMBL
Match: A0A0A0KZU9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052070 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.8e-44
Identity = 99/108 (91.67%), Postives = 102/108 (94.44%), Query Frame = 0

Query: 1   MGNCVEVLSRQREEEGTTTTTSTREMEEKEKKGGMRIKVVLRKEELEWLTEQIKEKGGKG 60
           MGNCVEVLSRQREE+GTTTTTSTREMEE+EKKGGMRIKVVLRKEELEWLTEQIKEKGGK 
Sbjct: 1   MGNCVEVLSRQREEDGTTTTTSTREMEEREKKGGMRIKVVLRKEELEWLTEQIKEKGGKC 60

Query: 61  LEELLEEIERGRREKLENYCSIQYSSVSWKPSLESIMECPEIPDHMFR 109
           LEELLEEIERGRREK    CSIQY +VSWKPSLESIMECPEIPDHMFR
Sbjct: 61  LEELLEEIERGRREKTVMNCSIQY-NVSWKPSLESIMECPEIPDHMFR 107

BLAST of IVF0007210 vs. ExPASy TrEMBL
Match: A0A6J1FTR3 (uncharacterized protein LOC111447226 OS=Cucurbita moschata OX=3662 GN=LOC111447226 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 8.4e-25
Identity = 69/106 (65.09%), Postives = 83/106 (78.30%), Query Frame = 0

Query: 1   MGNCVEVLSRQREEEGTTTTTSTREMEEKEKKGGMRIKVVLRKEELEWLTEQIKEKGGKG 60
           MGNCVEVLSR+REEE  TTT +T  ME++E+KG +RIKVVL KEEL+WL EQ++E+GGKG
Sbjct: 1   MGNCVEVLSRRREEEEMTTTATTTIMEKEERKGRVRIKVVLTKEELQWLMEQVQERGGKG 60

Query: 61  LEELLEEIERGRREKLENYCSIQYSSVSWKPSLESIMECPEIPDHM 107
           LEELL EIE GRR+K+           SW+PSLESIME PE+PD M
Sbjct: 61  LEELLGEIE-GRRKKVN-------EDGSWRPSLESIMEVPEVPDRM 98

BLAST of IVF0007210 vs. ExPASy TrEMBL
Match: A0A6J1C443 (uncharacterized protein LOC111008308 OS=Momordica charantia OX=3673 GN=LOC111008308 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.8e-20
Identity = 65/112 (58.04%), Postives = 79/112 (70.54%), Query Frame = 0

Query: 1   MGNCVEVLSRQREEEGTTTTTSTREMEEKEKKGGMRIKVVLRKEELEWLTEQIKEKGGKG 60
           MGNCVE + +  E           E E+KE KGGMRIKVVL KEELEWL E I E+GG+ 
Sbjct: 1   MGNCVEAVWKPEE---------AAEEEKKEMKGGMRIKVVLTKEELEWLMEHINERGGRN 60

Query: 61  LEELLEE--IERGRR-EKLENYCSIQY-SSVSWKPSLESIMECPEIPDHMFR 109
           LE+LLEE  IERGRR  K+ +  ++ + +S SWKPSLESI+ECPE+PDHM R
Sbjct: 61  LEDLLEEIQIERGRRSRKVISREALDFNTSASWKPSLESIVECPELPDHMQR 103

BLAST of IVF0007210 vs. ExPASy TrEMBL
Match: A0A438J5K9 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_015680 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 5.6e-13
Identity = 51/105 (48.57%), Postives = 67/105 (63.81%), Query Frame = 0

Query: 1   MGNCVEVLSRQREEEGTTTTTSTREMEEKEKKG---GMRIKVVLRKEELEWLTEQIKEKG 60
           MGNC+E   R+R E         ++  E+EKKG   G+R+K+VL KEELEW+  Q+K+KG
Sbjct: 1   MGNCMET-CRERNEAEEEERNQEKQGGEEEKKGSGYGVRVKIVLTKEELEWMMFQLKDKG 60

Query: 61  GKGLEELLEEIERGRREKLENYCSIQYSSVSWKPSLESIMECPEI 103
           GK LE++L EIERGR     +  +       WKPSLESIME PE+
Sbjct: 61  GKSLEDVLREIERGR-----SSAATAGKVEGWKPSLESIMESPEV 99

BLAST of IVF0007210 vs. ExPASy TrEMBL
Match: F6HU23 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0025g01450 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 5.6e-13
Identity = 51/105 (48.57%), Postives = 67/105 (63.81%), Query Frame = 0

Query: 1   MGNCVEVLSRQREEEGTTTTTSTREMEEKEKKG---GMRIKVVLRKEELEWLTEQIKEKG 60
           MGNC+E   R+R E         ++  E+EKKG   G+R+K+VL KEELEW+  Q+K+KG
Sbjct: 1   MGNCMET-CRERHEAEEEERNQEKQGGEEEKKGSGYGVRVKIVLTKEELEWMMFQLKDKG 60

Query: 61  GKGLEELLEEIERGRREKLENYCSIQYSSVSWKPSLESIMECPEI 103
           GK LE++L EIERGR     +  +       WKPSLESIME PE+
Sbjct: 61  GKSLEDVLREIERGR-----SSAATAGKVEGWKPSLESIMESPEV 99

BLAST of IVF0007210 vs. NCBI nr
Match: KGN53406.1 (hypothetical protein Csa_015211 [Cucumis sativus])

HSP 1 Score: 184 bits (467), Expect = 4.48e-58
Identity = 99/108 (91.67%), Postives = 102/108 (94.44%), Query Frame = 0

Query: 1   MGNCVEVLSRQREEEGTTTTTSTREMEEKEKKGGMRIKVVLRKEELEWLTEQIKEKGGKG 60
           MGNCVEVLSRQREE+GTTTTTSTREMEE+EKKGGMRIKVVLRKEELEWLTEQIKEKGGK 
Sbjct: 1   MGNCVEVLSRQREEDGTTTTTSTREMEEREKKGGMRIKVVLRKEELEWLTEQIKEKGGKC 60

Query: 61  LEELLEEIERGRREKLENYCSIQYSSVSWKPSLESIMECPEIPDHMFR 108
           LEELLEEIERGRREK    CSIQY+ VSWKPSLESIMECPEIPDHMFR
Sbjct: 61  LEELLEEIERGRREKTVMNCSIQYN-VSWKPSLESIMECPEIPDHMFR 107

BLAST of IVF0007210 vs. NCBI nr
Match: XP_023543788.1 (uncharacterized protein LOC111803552 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 129 bits (325), Expect = 1.74e-36
Identity = 72/106 (67.92%), Postives = 86/106 (81.13%), Query Frame = 0

Query: 1   MGNCVEVLSRQREEEGTTTTTSTREMEEKEKKGGMRIKVVLRKEELEWLTEQIKEKGGKG 60
           MGNCVEVLSR+REEEGT TTT+T  ME++E+KGG+RIKVVL KEEL+WL EQ++E+GGKG
Sbjct: 1   MGNCVEVLSRRREEEGTMTTTTTTTMEKEERKGGVRIKVVLTKEELQWLMEQVQERGGKG 60

Query: 61  LEELLEEIERGRREKLENYCSIQYSSVSWKPSLESIMECPEIPDHM 106
           LEELL EIER RR+  E+         SW+PSLESIME PE+PD M
Sbjct: 61  LEELLGEIERRRRKVDEDG--------SWRPSLESIMEVPEVPDRM 98

BLAST of IVF0007210 vs. NCBI nr
Match: XP_022942038.1 (uncharacterized protein LOC111447226 [Cucurbita moschata])

HSP 1 Score: 120 bits (300), Expect = 1.11e-32
Identity = 69/106 (65.09%), Postives = 83/106 (78.30%), Query Frame = 0

Query: 1   MGNCVEVLSRQREEEGTTTTTSTREMEEKEKKGGMRIKVVLRKEELEWLTEQIKEKGGKG 60
           MGNCVEVLSR+REEE  TTT +T  ME++E+KG +RIKVVL KEEL+WL EQ++E+GGKG
Sbjct: 1   MGNCVEVLSRRREEEEMTTTATTTIMEKEERKGRVRIKVVLTKEELQWLMEQVQERGGKG 60

Query: 61  LEELLEEIERGRREKLENYCSIQYSSVSWKPSLESIMECPEIPDHM 106
           LEELL EIE GRR+K+           SW+PSLESIME PE+PD M
Sbjct: 61  LEELLGEIE-GRRKKVNE-------DGSWRPSLESIMEVPEVPDRM 98

BLAST of IVF0007210 vs. NCBI nr
Match: KAG6600517.1 (hypothetical protein SDJN03_05750, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 118 bits (295), Expect = 6.59e-32
Identity = 70/107 (65.42%), Postives = 84/107 (78.50%), Query Frame = 0

Query: 1   MGNCVEVLSRQREEEGTTTTTSTREMEEKEKKGG-MRIKVVLRKEELEWLTEQIKEKGGK 60
           MGNCVEVLSR+ EEE TTTT +T  ME++E+KGG +RIKVVL KEEL+WL EQ++E+GGK
Sbjct: 1   MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGK 60

Query: 61  GLEELLEEIERGRREKLENYCSIQYSSVSWKPSLESIMECPEIPDHM 106
           GLEELL EIE GRR+K+           SW+PSLESIME PE+PD M
Sbjct: 61  GLEELLGEIE-GRRKKVNE-------DGSWRPSLESIMEVPEVPDRM 99

BLAST of IVF0007210 vs. NCBI nr
Match: KAG7031156.1 (hypothetical protein SDJN02_05196, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 114 bits (285), Expect = 2.19e-30
Identity = 69/107 (64.49%), Postives = 83/107 (77.57%), Query Frame = 0

Query: 1   MGNCVEVLSRQREEEGTTTTTSTREMEEKEKKGG-MRIKVVLRKEELEWLTEQIKEKGGK 60
           MGNCVEVLSR+ EEE TTTT +T  ME++E+KGG +RIKVVL KEEL+WL EQ++E+GGK
Sbjct: 1   MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGK 60

Query: 61  GLEELLEEIERGRREKLENYCSIQYSSVSWKPSLESIMECPEIPDHM 106
           GLEELL EIE GRR+K+           SW+PSLESIME PE+ D M
Sbjct: 61  GLEELLGEIE-GRRKKVNE-------DGSWRPSLESIMEVPEVLDRM 99

BLAST of IVF0007210 vs. TAIR 10
Match: AT1G64405.1 (unknown protein; Has 13 Blast hits to 13 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 3.0e-06
Identity = 35/116 (30.17%), Postives = 64/116 (55.17%), Query Frame = 0

Query: 1   MGNCVEVLSRQREEEGTTTTTSTREM-------EEKEKKGGMRIKVVLRKEELEWLTEQI 60
           MGNC+E   +   EEG    T   +        + ++  GGM++K+VL + EL+    Q+
Sbjct: 1   MGNCMERWMQGEGEEGKIEVTERAKESFKLDGDDNEDGHGGMKVKIVLTRHELDMFLLQM 60

Query: 61  KEKGGKGL---EELLEEIERGRREKLENYCSIQY--SSVSWKPSLESIMECPEIPD 105
                  L   ++++ E+E+ R  +  ++ S+    SS++W+P+LESI+ECPE+ +
Sbjct: 61  NRSHDGNLMITKDVMVELEK-RIIRASSFSSLSSSPSSIAWEPALESILECPEVQE 115

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KZU92.8e-4491.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052070 PE=4 SV=1[more]
A0A6J1FTR38.4e-2565.09uncharacterized protein LOC111447226 OS=Cucurbita moschata OX=3662 GN=LOC1114472... [more]
A0A6J1C4432.8e-2058.04uncharacterized protein LOC111008308 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A438J5K95.6e-1348.57Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_015680 PE=4 SV=1[more]
F6HU235.6e-1348.57Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0025g01450 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
KGN53406.14.48e-5891.67hypothetical protein Csa_015211 [Cucumis sativus][more]
XP_023543788.11.74e-3667.92uncharacterized protein LOC111803552 [Cucurbita pepo subsp. pepo][more]
XP_022942038.11.11e-3265.09uncharacterized protein LOC111447226 [Cucurbita moschata][more]
KAG6600517.16.59e-3265.42hypothetical protein SDJN03_05750, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7031156.12.19e-3064.49hypothetical protein SDJN02_05196, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
AT1G64405.13.0e-0630.17unknown protein; Has 13 Blast hits to 13 proteins in 7 species: Archae - 0; Bact... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availablePANTHERPTHR35704OS02G0254600 PROTEINcoord: 1..106
NoneNo IPR availablePANTHERPTHR35704:SF1OS02G0254600 PROTEINcoord: 1..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0007210.1IVF0007210.1mRNA