IVF0007170 (gene) Melon (IVF77) v1

Overview


Name	IVF0007170
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Gag/pol protein
Location	chr05: 15581235 .. 15588676 (-)
RNA-Seq Expression	IVF0007170
Synteny	IVF0007170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAGTAGATTTGCTCTCTTAAGGGTTGATTTCAGGGCTTGAACAATGTGGCGCCACACCCTCTCTTGCCTGAGAGGAGTTCAGTATAGTAGGACTATAATTATTGTTCATTAGAGGAATCAATGGTACTTAAGGAGTTAGATGTAACTACAGGGGCAAAACGGTAATTTTGGCCTAGCTGTACTTACGAGCAATTTGTGAAGGGTCATTGCACTGTTGATTGGTTATATCTAATGACACAAAATATATCTACAGTTAGAAGAGTGCAACTATTAGTCTTTAGTGGAATGACTAATAGTTAATGAATATAGATTAAATTTAATTAAAGAGTTTTAATTAATTACTCATTTCATTAGAGCTTCAATCTGTAGGTCCATAAGGTCCCCTTGTTAGCTCAATAAGGATAAATGAGAATCAAATTTATTTTGGTTAATTTGAATTGTTCAAATTGATTAAAGGGAATAAATTGTATATGATACAATTAATATAATTTATTTTTGATACATTATAATGTAAAGTTTTTTATGAGAGAAGTTAATATTTGAATATGATATCAATAATAATAGTAATAAAATGAAGATTCATAAATAAACTATAGGTTAAAATTGAATTCGATTCATATTAGAACTATAGATTATATGAGAGACTCTAATCATTGGTTATATTATATATGATAATATAATTATTATATTATATAGATATTGATATTTTGTAATTAAATTTATATTAATTTTATGTTAATGAGATATATATATTAATTTATTTATTTGATTTTATTTAATTTAATTAATATATATATATATATATATATATATATTAATAATTTAAATAGAATATAGAATAACTCCCTTGGGAGTTATATCTACGTGGAAAAATGGGAAGTTATTTGATAACTTCCCCCTCCAGTTGTTGAGATTGTTTTAAAAAGAAATAAAAAGAAAGGTTTTCTTTTAACAGCAGAGACAATCTTACGATCTCTCTGTATCCAACAAAACAAAATCCTCTCAAAAGCTTCTTCCCTCACCAAATTACAGAAGCCCACAACTCTCTGTGATTCTTTACTTGGAGAATAACGAGGAAGATTTTGTGGTGCCACGAAGCTTGGAAGAAGAATTGGTTCTACAAAGGTCAGTTTATTTTCACCTTTTCCATGAAAGCATGTTTATTATTTTTCTTTGAATTTATTGGTTTCAAAATTGAATTTCACTCGCACGGGCGTTCATAAGCTTTCGCTTTAGGAATTCCATTCCTTCAATTGGTATCAGAGCCAAATCGTGCAATTGTTTTTTCAATTTTTTTTGAAACAAAATTCAAAGAAAGGTGGTATTTTTTCTCTGCATTGTTGTATGTGGGTTTGCAAAATAGATGTTTTCGATTTGGCACCTTAGATTACAATTTTTTTATTTTTCATTAATTTGATTGATGTAAGGGCTGTTGTTTGGCCATTTTAATTCTGTAATCGAGTCTGTAAGTCCATGTCGTTCGAGGCAAGTGTTGCTGGGTTGATGAACGATTTTCGGAGGCATTACGGAGTTTTTTTTTTTCCAGTTCGTACAGATTCAAATCTGTACAGAGTTGCAGCAGATTTTGTTATTAAAAAAAAAAAACAAAAAAAACAATATATCTTTATGCGCGTCTTCCAAACATCGTGGATTGCTTCCTGGTGCAGTGGCTTGTTGTCCATTTCTGTTGCAAGAGGTCGTGGCTTCGAGTTCCAGATCGTGCGGTTTTTCATTTTTTTTGTTTCAATTAATTAATTAATATAATTTGATTATATTAATTTGATTATTTTTTTAGGAGTGCCAAATTCGGTCTATTTTGCTTTTAATATTTTACTGCATGTGATGTTTTATAAACTAATTTATACATAATTAGTCATATAGTTTAAAATCCCACCTTAGGATTATAATTATCATGCATCATACTTAAATATAAGTGTTGTATTTTAGTTGCATGATTTTCTAAGCATGCTCATGCATCATATTTAATATAATTGTTATATTATATGATAGCATGTATAATTAATATATCCATGCATCATCCTATAATTTAACATGTTGTATTATATAGTTTGATTGATGGATGTTTTTATTTTCATTGCATTAATATAATTGTTGTATTGTGTGATGAAAATGAAAATGCATTGAGCATGTCATTACTTAGAGAATATATATATTAAATGACATTAGAATTGCATGTTTATAGTTTTTAATTATTTTCTTTCCTTATAAGTGTTATAAGTTTATGAATTTAGAATTAAAATCTATAATAAAGAGTTGCATGCTAACATAAGGTCACAATTAGTTTTAAATAGTTTAAAATTAATTCACCTAGACCTTAATGAATAATATTCTAATGAGATTAGAAATAGGGTTAATCTTTTCTCGTTTTATTAGGATTAAAATGATATCAATAAAAGATTAAATTTATAAAATATTTGTCTATAAGGGACCTTTGTCTAAGGAAGGTTCTGTCTAGGCTGGGGTACTTAAGCTGACGGTAACGGAACACCCCTACCTGGGAACTGACCTGGAAGGTGAATTAGTCAAACATTTTATAAGCATGCAATACATGATTATATTTATCAAAGTGTTTGATGAACAATAATCATATATTGTTAAACAATCCAATATAAGAGTTATATTGGGCCAATTTAACAATGGACTTAGATAAATAATTAGCCGTATTTTCTAAGTTGTTTTTTAAGTAAAACACTAAGTGGGAGGAAATGAGGTATATGATACTTCATTTTTCTTTTCATGTTTCTCCTTAAACATTCACACCGTGAGACTTATGCTCGGCCTCGAGGCACCTTTGCTTGTGTCCCCCTACGGATGGTGTTTGTGTAAGTCAATAACAAGGTGAATGGAGATAGTGTTTATAGTAAGTGGGAGAGGGATGTGTGTCAACACATCCCGCGGTCTCTTTCATTAGTTTTAGTAAATTCTCATGCTTGGCCTTGAGGCACCTTTGCTTGTGTTCCCCTACGGAAGGTGTTTGCATTAGATTTTACTCAAACTCCAGAAATGGATAAGATTTCTTTAGTTTTTGCTCCAATCGGTTTTTTCCCTACGGATTACTTATTGGGGCGGAACTCTAGAATCTAAAATGAAAGGTTACACTTACAAGAAATTTTAAGTAAGTTAATCATTTCTTGACTAAACAATGATGACTAACTATTATAGGAATAAGAGTTATTCTAGTGTAATATTTAGTTGAGATTGTCTCAATTTAGTGAAGGGATAATTAATCACCCTACGGAGATTTTTTATCCTACCTCACTGAAGCATCATTGCAAAATAGATATCACTTAGGATACATTAAAATTTTGCTAAATTGATTGGTTTTATATGGAAAATGCTAGTATAACTAATATAAATAAATTGTATGTTTTCAGTAATTTGATAATGACGAGTGCTACTTTGAATATGCTGGCTGCTGATAAACTTAATGGCAATAATTATGCATCTTGGAAAAATACTATCAACACTGTGCTAATCATCGATGACCTTAGATTTGTCCTAGTTGAGGAGTGTCCTCAAGTCCCAGCTGCTAATGCAACTCGAACTGTTCGAGAACCATATGAGCGTTGGGCCAAGGCAAATGAAAAAGCCCGAGCATACATCTTGGCAAGCTTATCTGAAGTATTGGCCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATTATGGACTCCTTGCAGGAGATGTTTGGTCAGGCCTCTTATCAGATCAAGCATGATGCTCTGAAATACATTTATAATGCCCGTATGAATGAGGGAGCCTCAGTGCGAGAACATGTTCTCAATATGATGGTTCATTTCAACGTGGCAGAAATGAATGGGGCTGTCATCGATGAAGCCAGTCAGGTTAGCTTTATTTTGGAATCTCTGCCAGAGAGTTTCCTGCAATTTAGAAGCAATGCTGTTATGAATAAGATTGCTTATACCCTTACCACCCTTCTCAACGAGCTACAGACTTTTGAGTCTCTGATGAAAATCAAGGGACAGAAGGGAGAGGCAAATGTTGCTACTTCCACAAGAAAGTTCCATAGGGGTTCGACCTCAGGAACAAAGTCTATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGGGTGGCCAAGGAAATAAAGCTAACCTCGCTGCTGCTAAAACGACCAAGAAAACCAAAGCTGCAAAGGGAATATGTTTCCATTGCAACCAAGAGGGACATTGGAAGAGAAACTGTCCCAAGTACTTGGCAGAAAAGAAGAAGGCTAAACAAGGTAAATATGATTTACTAGTGCTAGAGACTTGTTTAGTGGAAAATGATGATTCAGCCTGGATAATAGATTCAGGTGCCACTAATCATGTTTGTTCTTCATTTCAGGGAATTAGTTCCTGGCGGCAGTTGGAGACTGGAGAGATGACGATGCGAGTTGGAACTGGGCATGTCGTCTCAGCAATTGCAGTGGGAGGGCTTCGACTTTGTTTACAGAAATCTTTTCTTTTATTAGAAAATGTATATGTTGTTCCTGATTTAAAAAGGAATTTGATTTCTGTAAAGTGCTTACTAGAACAATCTTACTCGTTAACTTTTAATGTAAATAAAGTGTTTATTTACAAAAATGGTGTTGAGATTTGTTCTGCAAAGTTAGAAAATAATCTTTATGTGTTAAGATCATTAACATCTAAAGCTCTTCTTAATACTGAAATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTAGGGCATATAAATCTCAATAGAATTGAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGCCTTGAAGGTAAGATGACCAAAAGACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCATTGGGAATGATATAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAAGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATTTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGAACGAGGGACTACACGCTTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTACGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTCGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTGGGTCTACGTGACATGCCACATTTAACCTAG

mRNA sequence

ATGCAGAGACAATCTTACGATCTCTCTGTATCCAACAAAACAAAATCCTCTCAAAAGCTTCTTCCCTCACCAAATTACAGAAGCCCACAACTCTCTGTGATTCTTTACTTGGAGAATAACGAGGAAGATTTTGTGGTGCCACGAAGCTTGGAAGAAGAATTGGTTCTACAAAGTAATTTGATAATGACGAGTGCTACTTTGAATATGCTGGCTGCTGATAAACTTAATGGCAATAATTATGCATCTTGGAAAAATACTATCAACACTGTGCTAATCATCGATGACCTTAGATTTGTCCTAGTTGAGGAGTGTCCTCAAGTCCCAGCTGCTAATGCAACTCGAACTGTTCGAGAACCATATGAGCGTTGGGCCAAGGCAAATGAAAAAGCCCGAGCATACATCTTGGCAAGCTTATCTGAAGTATTGGCCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATTATGGACTCCTTGCAGGAGATGTTTGGTCAGGCCTCTTATCAGATCAAGCATGATGCTCTGAAATACATTTATAATGCCCGTATGAATGAGGGAGCCTCAGTGCGAGAACATGTTCTCAATATGATGGTTCATTTCAACGTGGCAGAAATGAATGGGGCTGTCATCGATGAAGCCAGTCAGGTTAGCTTTATTTTGGAATCTCTGCCAGAGAGTTTCCTGCAATTTAGAAGCAATGCTGTTATGAATAAGATTGCTTATACCCTTACCACCCTTCTCAACGAGCTACAGACTTTTGAGTCTCTGATGAAAATCAAGGGACAGAAGGGAGAGGCAAATGTTGCTACTTCCACAAGAAAGTTCCATAGGGGTTCGACCTCAGGAACAAAGTCTATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGGGTGGCCAAGGAAATAAAGCTAACCTCGCTGCTGCTAAAACGACCAAGAAAACCAAAGCTGCAAAGGGAATATGTTTCCATTGCAACCAAGAGGGACATTGGAAGAGAAACTGTCCCAAGTACTTGGCAGAAAAGAAGAAGGCTAAACAAGGTAAATATGATTTACTAGTGCTAGAGACTTGTTTAGTGGAAAATGATGATTCAGCCTGGATAATAGATTCAGGTGCCACTAATCATGTTTGTTCTTCATTTCAGGGAATTAGTTCCTGGCGGCAGTTGGAGACTGGAGAGATGACGATGCGAGTTGGAACTGGGCATGTCGTCTCAGCAATTGCAGTGGGAGGGCTTCGACTTTGTTTACAGAAATCTTTTCTTTTATTAGAAAATGTATATGTTGTTCCTGATTTAAAAAGGAATTTGATTTCTGTAAAGTGCTTACTAGAACAATCTTACTCGTTAACTTTTAATGTAAATAAAGTGTTTATTTACAAAAATGGTGTTGAGATTTGTTCTGCAAAGTTAGAAAATAATCTTTATGTGTTAAGATCATTAACATCTAAAGCTCTTCTTAATACTGAAATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTAGGGCATATAAATCTCAATAGAATTGAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGCCTTGAAGGTAAGATGACCAAAAGACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCATTGGGAATGATATAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAAGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATTTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGAACGAGGGACTACACGCTTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTACGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTCGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTGGGTCTACGTGACATGCCACATTTAACCTAG

Coding sequence (CDS)

ATGCAGAGACAATCTTACGATCTCTCTGTATCCAACAAAACAAAATCCTCTCAAAAGCTTCTTCCCTCACCAAATTACAGAAGCCCACAACTCTCTGTGATTCTTTACTTGGAGAATAACGAGGAAGATTTTGTGGTGCCACGAAGCTTGGAAGAAGAATTGGTTCTACAAAGTAATTTGATAATGACGAGTGCTACTTTGAATATGCTGGCTGCTGATAAACTTAATGGCAATAATTATGCATCTTGGAAAAATACTATCAACACTGTGCTAATCATCGATGACCTTAGATTTGTCCTAGTTGAGGAGTGTCCTCAAGTCCCAGCTGCTAATGCAACTCGAACTGTTCGAGAACCATATGAGCGTTGGGCCAAGGCAAATGAAAAAGCCCGAGCATACATCTTGGCAAGCTTATCTGAAGTATTGGCCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATTATGGACTCCTTGCAGGAGATGTTTGGTCAGGCCTCTTATCAGATCAAGCATGATGCTCTGAAATACATTTATAATGCCCGTATGAATGAGGGAGCCTCAGTGCGAGAACATGTTCTCAATATGATGGTTCATTTCAACGTGGCAGAAATGAATGGGGCTGTCATCGATGAAGCCAGTCAGGTTAGCTTTATTTTGGAATCTCTGCCAGAGAGTTTCCTGCAATTTAGAAGCAATGCTGTTATGAATAAGATTGCTTATACCCTTACCACCCTTCTCAACGAGCTACAGACTTTTGAGTCTCTGATGAAAATCAAGGGACAGAAGGGAGAGGCAAATGTTGCTACTTCCACAAGAAAGTTCCATAGGGGTTCGACCTCAGGAACAAAGTCTATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGGGTGGCCAAGGAAATAAAGCTAACCTCGCTGCTGCTAAAACGACCAAGAAAACCAAAGCTGCAAAGGGAATATGTTTCCATTGCAACCAAGAGGGACATTGGAAGAGAAACTGTCCCAAGTACTTGGCAGAAAAGAAGAAGGCTAAACAAGGTAAATATGATTTACTAGTGCTAGAGACTTGTTTAGTGGAAAATGATGATTCAGCCTGGATAATAGATTCAGGTGCCACTAATCATGTTTGTTCTTCATTTCAGGGAATTAGTTCCTGGCGGCAGTTGGAGACTGGAGAGATGACGATGCGAGTTGGAACTGGGCATGTCGTCTCAGCAATTGCAGTGGGAGGGCTTCGACTTTGTTTACAGAAATCTTTTCTTTTATTAGAAAATGTATATGTTGTTCCTGATTTAAAAAGGAATTTGATTTCTGTAAAGTGCTTACTAGAACAATCTTACTCGTTAACTTTTAATGTAAATAAAGTGTTTATTTACAAAAATGGTGTTGAGATTTGTTCTGCAAAGTTAGAAAATAATCTTTATGTGTTAAGATCATTAACATCTAAAGCTCTTCTTAATACTGAAATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTAGGGCATATAAATCTCAATAGAATTGAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGCCTTGAAGGTAAGATGACCAAAAGACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCATTGGGAATGATATAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAAGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATTTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGAACGAGGGACTACACGCTTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTACGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTCGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTGGGTCTACGTGACATGCCACATTTAACCTAG

Protein sequence

MQRQSYDLSVSNKTKSSQKLLPSPNYRSPQLSVILYLENNEEDFVVPRSLEEELVLQSNLIMTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT

Homology

[Close]

BLAST of IVF0007170 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 765.4 bits (1975), Expect = 1.1e-219
Identity = 481/1379 (34.88%), Postives = 738/1379 (53.52%), Query Frame = 0


Query: 74   KLNGNN-YASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARA 133
            K NG+N +++W+  +  +LI   L  VL  +  +     A        E WA  +E+A +
Sbjct: 10   KFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKA--------EDWADLDERAAS 69

Query: 134  YILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREH 193
             I   LS+ +        TAR I   L+ ++   +   K    K +Y   M+EG +   H
Sbjct: 70   AIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSH 129

Query: 194  --VLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNEL 253
              V N ++   +A + G  I+E  +   +L SLP S+    +  +  K    L  + + L
Sbjct: 130  LNVFNGLI-TQLANL-GVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSAL 189

Query: 254  QTFESLMKIKGQKGEANVATST-RKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLA 313
               E + K    +G+A +     R + R S +  +S              G +G      
Sbjct: 190  LLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRS--------------GARG------ 249

Query: 314  AAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYD-------------LLV 373
              K+  ++K+    C++CNQ GH+KR+CP     K +    K D             +L 
Sbjct: 250  --KSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLF 309

Query: 374  L---ETCL-VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAV 433
            +   E C+ +   +S W++D+ A++H          +   + G  T+++G         +
Sbjct: 310  INEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFG--TVKMGNTSYSKIAGI 369

Query: 434  GGLRLCLQKSF---LLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEIC 493
            G   +C++ +    L+L++V  VPDL+ NLIS   L    Y   F   K  + K  + I 
Sbjct: 370  GD--ICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIA 429

Query: 494  SAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIER 553
                   LY   +   +  LN    + ++               LWH R+GH++   ++ 
Sbjct: 430  KGVARGTLYRTNAEICQGELNAAQDEISV--------------DLWHKRMGHMSEKGLQI 489

Query: 554  LVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGG 613
            L K  L+S  +  ++  C+ CL GK  +  F     R    L+LV+SD+CGPM +++ GG
Sbjct: 490  LAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGG 549

Query: 614  FEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLK 673
             +YF+TF DD SR  +VY+++ K +  + F+++ A VE    + +K  RSD GGEY   +
Sbjct: 550  NKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSRE 609

Query: 674  FQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVY 733
            F+ Y    GI  + + PGTPQ NGV+ER NRT+++ VRSM+  A LP SFWG AVQTA Y
Sbjct: 610  FEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACY 669

Query: 734  ILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCP--AHVLENNPKKLEPRSKLCLFVGY 793
            ++N  PS  ++ E P ++W  ++ S  H +++GC   AHV +    KL+ +S  C+F+GY
Sbjct: 670  LINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGY 729

Query: 794  PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNEL--------------- 853
                 G   +DP   KV  S +  F  E  +R     S+ V N +               
Sbjct: 730  GDEEFGYRLWDPVKKKVIRSRDVVF-RESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPT 789

Query: 854  -SKETTEPSTRVVEEP-----------SALTRVVHVGSSTRTHQPQSLREPRRSGRVTNL 913
             ++ TT+  +   E+P             +  V H       HQP      RRS R    
Sbjct: 790  SAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPL-----RRSERPRVE 849

Query: 914  PIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQP 973
              RY S TE + +  D    +P + K+ +   +K++ +KAM  E+ES+  N  + LV+ P
Sbjct: 850  SRRYPS-TEYVLISDD---REPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELP 909

Query: 974  DGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLS 1033
             G +P+ CKW++K K+  D K+  +KARLV KG+ Q +G+D++E FSPV  + SIR +LS
Sbjct: 910  KGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILS 969

Query: 1034 IAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRS 1093
            +AA  D E+ Q+DVKTAFL+G+LEE IYM+QPEGF + G++  +CKLN+S+YGLKQA R 
Sbjct: 970  LAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQ 1029

Query: 1094 WNIRFDTAIKSYGFDQIVDEPCVY-KRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWL 1153
            W ++FD+ +KS  + +   +PCVY KR    +   L+LYVDD+L++G D GL+  +K  L
Sbjct: 1030 WYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDL 1089

Query: 1154 ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGV 1213
            +  F MKDLG AQ +LG++I R+R ++ L LSQ  YI++++ +++M+N+K    P    +
Sbjct: 1090 SKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHL 1149

Query: 1214 TLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWT 1273
             LSK+ CP T ++   M  +PY+SAVGSLMYAM+CTRPDI +AVG+VSR+  NPG  HW 
Sbjct: 1150 KLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWE 1209

Query: 1274 AVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRS 1333
            AVK IL+YLR T    L +G  D IL GYTD+D   D D+RKS++G +FT +GGA+ W+S
Sbjct: 1210 AVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQS 1269

Query: 1334 IKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSRE 1393
              Q C+A ST EAEY+AA E  KE +WL+ FL +L +     K   +YCD+  A+  S+ 
Sbjct: 1270 KLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGL---HQKEYVVYCDSQSAIDLSKN 1325

Query: 1394 PRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGL 1398
               H R KHI+ +YH IRE+V    + V +I++  N AD  TK +    FE   E +G+
Sbjct: 1330 SMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELVGM 1325

[Close]

BLAST of IVF0007170 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 545.8 bits (1405), Expect = 1.4e-153
Identity = 425/1457 (29.17%), Postives = 690/1457 (47.36%), Query Frame = 0


Query: 76   NGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYIL 135
            +G  YA WK  I  +L   D+  V+    P            E  + W KA   A++ I+
Sbjct: 12   DGEKYAIWKFRIRALLAEQDVLKVVDGLMP-----------NEVDDSWKKAERCAKSTII 71

Query: 136  ASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVRE--HV 195
              LS+       S +TAR+I+++L  ++ + S   +    K + + +++   S+    H+
Sbjct: 72   EYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSHFHI 131

Query: 196  LNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTF 255
             + ++   +A   GA I+E  ++S +L +LP  +      A+       LT    + +  
Sbjct: 132  FDELISELLAA--GAKIEEMDKISHLLITLPSCY-DGIITAIETLSEENLTLAFVKNRLL 191

Query: 256  ESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKT 315
            +  +KIK    + +        H  + +   ++     N+  K KK  +GN        +
Sbjct: 192  DQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNL---FKNRVTKPKKIFKGN--------S 251

Query: 316  TKKTKAAKGICFHCNQEGHWKRNCPKY---LAEKKKAKQGKYDL-----LVLETCLVEN- 375
              K K     C HC +EGH K++C  Y   L  K K  + +        +      V N 
Sbjct: 252  KYKVK-----CHHCGREGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFMVKEVNNT 311

Query: 376  ---DDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 435
               D+  +++DSGA++H+ +     +   ++           G  + A   G +RL    
Sbjct: 312  SVMDNCGFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRL-RND 371

Query: 436  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEIC-SAKLENNLYVL 495
              + LE+V    +   NL+SVK L E   S+ F+ + V I KNG+ +  ++ + NN+ V+
Sbjct: 372  HEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGMLNNVPVI 431

Query: 496  RSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE 555
                               Q   +    K N  LWH R GHI+  ++  + +  + S+  
Sbjct: 432  N-----------------FQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQS 491

Query: 556  -----ENSLPVCESCLEGKMTKRPF---TGKGHRAKEPLELVHSDLCGPMNVKARGGFEY 615
                 E S  +CE CL GK  + PF     K H  K PL +VHSD+CGP+         Y
Sbjct: 492  LLNNLELSCEICEPCLNGKQARLPFKQLKDKTH-IKRPLFVVHSDVCGPITPVTLDDKNY 551

Query: 616  FITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQN 675
            F+ F D ++ Y   YL+++KS+    F+++ A+ E   +  +     D G EY+  + + 
Sbjct: 552  FVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQ 611

Query: 676  YLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILN 735
            + ++ GI   L+ P TPQ NGVSER  RT+ +  R+M+S A L  SFWG AV TA Y++N
Sbjct: 612  FCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLIN 671

Query: 736  CVPSKSV---SETPLKLWNGRKGSLRHFRIWGCPAHV-LENNPKKLEPRSKLCLFVGY-P 795
             +PS+++   S+TP ++W+ +K  L+H R++G   +V ++N   K + +S   +FVGY P
Sbjct: 672  RIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGYEP 731

Query: 796  KG--------------------------TRGGYFYD--------------PKDNKVFVST 855
             G                          +R   F                P D++  + T
Sbjct: 732  NGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQT 791

Query: 856  ----------NATFLEEDHIREHK----PRSKIVLNELS------------KETTEPSTR 915
                      N  FL++    E+K       KI+  E              K++ E +  
Sbjct: 792  EFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKY 851

Query: 916  VVEEPSALTRVVHVGSSTRTHQPQSLREP------------------------RRSGRVT 975
             + E     R  H+  S  +  P   RE                         RRS R+ 
Sbjct: 852  FLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLK 911

Query: 976  NLP-IRYMSLTETL--TVISDGDI--EDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSV 1035
              P I Y     +L   V++   I  + P +F +     DK  W +A+N EL +   N+ 
Sbjct: 912  TKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNT 971

Query: 1036 WDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 1095
            W +  +P+    +  +W++  K    G    +KARLVA+G+TQ   +DYEETF+PVA + 
Sbjct: 972  WTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARIS 1031

Query: 1096 SIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYG 1155
            S R +LS+   ++ ++ QMDVKTAFLNG L+E IYM+ P+G  I      +CKLN++IYG
Sbjct: 1032 SFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG--ISCNSDNVCKLNKAIYG 1091

Query: 1156 LKQASRSWNIRFDTAIKSYGFDQIVDEPCVY---KRIINKSVAFLVLYVDDILLIGNDIG 1215
            LKQA+R W   F+ A+K   F     + C+Y   K  IN+++ +++LYVDD+++   D+ 
Sbjct: 1092 LKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENI-YVLLYVDDVVIATGDMT 1151

Query: 1216 LLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKR 1275
             + + K++L  +F+M DL E +  +GI+I  + +   + LSQ++Y+ KI+ K++M+N   
Sbjct: 1152 RMNNFKRYLMEKFRMTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNA 1211

Query: 1276 GLLP----FRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIV 1335
               P      + +  S E C           + P  S +G LMY MLCTRPD+  AV I+
Sbjct: 1212 VSTPLPSKINYELLNSDEDC-----------NTPCRSLIGCLMYIMLCTRPDLTTAVNIL 1271

Query: 1336 SRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLI----LTGYTDSDFQTDRDSRKS 1395
            SRY S      W  +K +L+YL+ T D  L++  K+L     + GY DSD+      RKS
Sbjct: 1272 SRYSSKNNSELWQNLKRVLRYLKGTIDMKLIF-KKNLAFENKIIGYVDSDWAGSEIDRKS 1331

Query: 1396 TSGSVFTL-NGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMS 1398
            T+G +F + +   + W + +Q  +A S+ EAEY+A  EA +EA+WL+  L  + +   + 
Sbjct: 1332 TTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINI--KLE 1391

[Close]

BLAST of IVF0007170 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 3.2e-137
Identity = 406/1507 (26.94%), Postives = 657/1507 (43.60%), Query Frame = 0


Query: 52   EELVLQSNLIMTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPA-- 111
            EELVL +  I+    +NM    KL   NY  W   ++ +    +L   L       PA  
Sbjct: 6    EELVLNNTSIL---NVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATI 65

Query: 112  -ANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY 171
              +A   V   Y RW + ++   + +L ++S  +        TA +I ++L++++   SY
Sbjct: 66   GTDAAPRVNPDYTRWKRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSY 125

Query: 172  ----QIKHDALKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLP 231
                Q++    ++    +     ++ +++  ++  F+   + G  +D   QV  +LE+LP
Sbjct: 126  GHVTQLRTQLKQWTKGTK-----TIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLP 185

Query: 232  ESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTK 291
            E +              TLT +   L   ES  KI        +  +       +T+ T 
Sbjct: 186  EEYKPVIDQIAAKDTPPTLTEIHERLLNHES--KILAVSSATVIPITANAVSHRNTTTTN 245

Query: 292  SMPSSSGNKKWKKKKGGQGNK----ANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCP-- 351
            +  + + N ++  +     +K    ++        ++K   G C  C  +GH  + C   
Sbjct: 246  NNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRCSQL 305

Query: 352  KYLAEKKKAKQGKYDL--------LVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWR 411
            ++      ++Q             L L +    N+   W++DSGAT+H+ S F  + S  
Sbjct: 306  QHFLSSVNSQQPPSPFTPWQPRANLALGSPYSSNN---WLLDSGATHHITSDFNNL-SLH 365

Query: 412  QLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLE--- 471
            Q  TG   + V  G  +     G   L  +   L L N+  VP++ +NLISV  L     
Sbjct: 366  QPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANG 425

Query: 472  ---QSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRL 531
               + +  +F V  +     GV +   K ++ LY               +  A +Q   L
Sbjct: 426  VSVEFFPASFQVKDL---NTGVPLLQGKTKDELY--------------EWPIASSQPVSL 485

Query: 532  KISPKENA--HLWHLRLGHINLNRIERLVKNGLLSELE-ENSLPVCESCLEGKMTKRPFT 591
              SP   A    WH RLGH   + +  ++ N  LS L   +    C  CL  K  K PF+
Sbjct: 486  FASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFS 545

Query: 592  GKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKE 651
                 +  PLE ++SD+     + +   + Y++ F D ++RY ++Y ++ KS+  E F  
Sbjct: 546  QSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFIT 605

Query: 652  YKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRT 711
            +K  +EN     I TF SD GGE++ L    Y  + GI    S P TP+ NG+SER++R 
Sbjct: 606  FKNLLENRFQTRIGTFYSDNGGEFVAL--WEYFSQHGISHLTSPPHTPEHNGLSERKHRH 665

Query: 712  LLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIW 771
            +++   +++S+A +P ++W YA   AVY++N +P+  +  E+P +   G   +    R++
Sbjct: 666  IVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVF 725

Query: 772  GCPAH--VLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE---- 831
            GC  +  +   N  KL+ +S+ C+F+GY            + +++++S +  F E     
Sbjct: 726  GCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPF 785

Query: 832  -------DHIREHKPRSKIVLNELSKETTEPSTRVV----------------EEPSALTR 891
                     ++E +  S  V    S  TT P+   V                  PSA  R
Sbjct: 786  SNYLATLSPVQEQRRESSCV---WSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFR 845

Query: 892  VVHVGSS----------------------------------TRTHQ-------------- 951
               V SS                                  T+TH               
Sbjct: 846  NSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESP 905

Query: 952  ---PQSLREPRRSGRVTNLPIRYMSLTET--------------LTVISDGDIEDPLTF-- 1011
                QSL  P +S   +  P    S + T              L  I + + + PL    
Sbjct: 906  SQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHS 965

Query: 1012 ----------------------------KKAMEDVDKDEWIKAMNLELESMYFNSVWDLV 1071
                                        + A++ +  + W  AM  E+ +   N  WDLV
Sbjct: 966  MGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLV 1025

Query: 1072 DQPDG-VKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIR 1131
              P   V  +GC+WI+ +K  +DG +  +KARLVAKGY Q  G+DY ETFSPV    SIR
Sbjct: 1026 PPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIR 1085

Query: 1132 ILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQ 1191
            I+L +A    + I Q+DV  AFL G L + +YM QP GFI   +   +CKL +++YGLKQ
Sbjct: 1086 IVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQ 1145

Query: 1192 ASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIK 1251
            A R+W +     + + GF   V +  ++     KS+ ++++YVDDIL+ GND  LL +  
Sbjct: 1146 APRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTL 1205

Query: 1252 QWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFR 1311
              L+ +F +KD  E  + LGI+    R    L LSQ  YI  ++ + +M  +K    P  
Sbjct: 1206 DNLSQRFSVKDHEELHYFLGIE--AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMA 1265

Query: 1312 HGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLA 1371
                LS     K     E      Y   VGSL Y +  TRPDI YAV  +S++   P   
Sbjct: 1266 PSPKLSLYSGTKLTDPTE------YRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEE 1325

Query: 1372 HWTAVKTILKYLRRTRDYTL-VYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV 1402
            H  A+K IL+YL  T ++ + +     L L  Y+D+D+  D+D   ST+G +  L    +
Sbjct: 1326 HLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPI 1385

[Close]

BLAST of IVF0007170 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 8.6e-135
Identity = 400/1505 (26.58%), Postives = 646/1505 (42.92%), Query Frame = 0


Query: 52   EELVLQSNLIMTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPA-- 111
            EE+VL +  I+    +NM    KL   NY  W   ++ +    +L   L    P  PA  
Sbjct: 6    EEIVLVNTNIL---NVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATI 65

Query: 112  -ANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY 171
              +A   V   Y RW + ++   + IL ++S  +        TA +I ++L++++   SY
Sbjct: 66   GTDAVPRVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSY 125

Query: 172  QIKHDALKYIYNARMNEGASVREHV--LNMMVHFNVAEMNGAVIDEASQVSFILESLPES 231
                                   HV  L  +  F+   + G  +D   QV  +LE+LP+ 
Sbjct: 126  ----------------------GHVTQLRFITRFDQLALLGKPMDHDEQVERVLENLPDD 185

Query: 232  FLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSM 291
            +              +LT +   L   ES +          +  +       +T+  ++ 
Sbjct: 186  YKPVIDQIAAKDTPPSLTEIHERLINRESKLLALNSAEVVPITANVVTHRNTNTNRNQNN 245

Query: 292  PSSSGNKKWKKKKGGQGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKK 351
               + N      +      ++  +    ++ K   G C  C+ +GH  + CP+    +  
Sbjct: 246  RGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRCPQLHQFQST 305

Query: 352  AK-----------QGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETG 411
                         Q + +L V       N    W++DSGAT+H+ S F  + S+ Q  TG
Sbjct: 306  TNQQQSTSPFTPWQPRANLAVNSPYNANN----WLLDSGATHHITSDFNNL-SFHQPYTG 365

Query: 412  EMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLE------QS 471
               + +  G  +     G   L      L L  V  VP++ +NLISV  L        + 
Sbjct: 366  GDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEF 425

Query: 472  YSLTFNVNKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPK 531
            +  +F V  +     GV +   K ++ LY     +S+A+    MF +  +         K
Sbjct: 426  FPASFQVKDL---NTGVPLLQGKTKDELYEWPIASSQAV---SMFASPCS---------K 485

Query: 532  ENAHLWHLRLGHINLNRIERLVKNGLLSELE-ENSLPVCESCLEGKMTKRPFTGKGHRAK 591
                 WH RLGH +L  +  ++ N  L  L   + L  C  C   K  K PF+     + 
Sbjct: 486  ATHSSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSS 545

Query: 592  EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVEN 651
            +PLE ++SD+     + +   + Y++ F D ++RY ++Y ++ KS+  + F  +K+ VEN
Sbjct: 546  KPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVEN 605

Query: 652  ALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRS 711
                 I T  SD GGE++ L+  +YL + GI    S P TP+ NG+SER++R +++M  +
Sbjct: 606  RFQTRIGTLYSDNGGEFVVLR--DYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLT 665

Query: 712  MMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAH-- 771
            ++S+A +P ++W YA   AVY++N +P+  +  ++P +   G+  +    +++GC  +  
Sbjct: 666  LLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPW 725

Query: 772  VLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE---------DH 831
            +   N  KLE +SK C F+GY               +++ S +  F E            
Sbjct: 726  LRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGV 785

Query: 832  IREHKPRSKIVLNELSKETTEPSTRVV------------------EEPSAL--------- 891
                + RS    N  S  TT P+T +V                    PS L         
Sbjct: 786  STSQEQRSDSAPNWPS-HTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSN 845

Query: 892  --------------TRVVHVG--SSTRTHQPQ-----------------SLREPRRSGRV 951
                          T   H G   + + HQ Q                 S   P ++  +
Sbjct: 846  LPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPL 905

Query: 952  TNLPIRYMSLTETLTVISDGDI-------------------------------------- 1011
               PI    +    T IS+ +                                       
Sbjct: 906  PQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRA 965

Query: 1012 --------------------EDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLV-D 1071
                                 +P T  +AM+D   D W +AM  E+ +   N  WDLV  
Sbjct: 966  KDGIRKPNQKYSYATSLAANSEPRTAIQAMKD---DRWRQAMGSEINAQIGNHTWDLVPP 1025

Query: 1072 QPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRIL 1131
             P  V  +GC+WI+ +K  +DG +  +KARLVAKGY Q  G+DY ETFSPV    SIRI+
Sbjct: 1026 PPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIV 1085

Query: 1132 LSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQAS 1191
            L +A    + I Q+DV  AFL G L + +YM QP GF+   +   +C+L ++IYGLKQA 
Sbjct: 1086 LGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAP 1145

Query: 1192 RSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQW 1251
            R+W +   T + + GF   + +  ++     +S+ ++++YVDDIL+ GND  LL      
Sbjct: 1146 RAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDA 1205

Query: 1252 LATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHG 1311
            L+ +F +K+  +  + LGI+    R  + L LSQ  Y   ++ + +M  +K    P    
Sbjct: 1206 LSQRFSVKEHEDLHYFLGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATS 1265

Query: 1312 VTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHW 1371
              L+     K P   E      Y   VGSL Y +  TRPD+ YAV  +S+Y   P   HW
Sbjct: 1266 PKLTLHSGTKLPDPTE------YRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHW 1325

Query: 1372 TAVKTILKYLRRTRDYTL-VYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVW 1402
             A+K +L+YL  T D+ + +     L L  Y+D+D+  D D   ST+G +  L    + W
Sbjct: 1326 NALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISW 1385

[Close]

BLAST of IVF0007170 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 159.1 bits (401), Expect = 3.7e-37
Identity = 106/314 (33.76%), Postives = 150/314 (47.77%), Query Frame = 0


Query: 991  MDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKS 1050
            MDV TAFLN  ++E IY++QP GF+       + +L   +YGLKQA   WN   +  +K 
Sbjct: 1    MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 1051 YGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEA 1110
             GF +   E  +Y R  +    ++ +YVDD+L+      +   +KQ L   + MKDLG+ 
Sbjct: 61   IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 1111 QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQ 1170
               LG+ I +   N  + LS   YI K   +  +   K    P  +   L +   P   +
Sbjct: 121  DKFLGLNIHQS-SNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHL-K 180

Query: 1171 DVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRT 1230
            D+      PY S VG L++     RPDI Y V ++SR+   P   H  + + +L+YL  T
Sbjct: 181  DI-----TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTT 240

Query: 1231 RDYTLVYGS-KDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIK-QGCIADST 1290
            R   L Y S   L LT Y D+      D   ST G V  L G  V W S K +G I   +
Sbjct: 241  RSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPS 300

Query: 1291 MEAEYVAACEAAKE 1303
             EAEY+ A E   E
Sbjct: 301  TEAEYITASETVME 307

[Close]

BLAST of IVF0007170 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 2683.7 bits (6955), Expect = 0.0e+00
Identity = 1343/1343 (100.00%), Postives = 1343/1343 (100.00%), Query Frame = 0


Query: 62   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 121
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 122  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 181
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 182  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 241
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 242  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 301
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 302  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 361
            QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 362  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 421
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 422  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 481
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 482  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 541
            SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 542  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 601
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 602  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 661
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 662  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 721
            QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 722  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 781
            TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 782  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 841
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 842  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 901
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 902  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 961
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 962  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 1021
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 1022 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1081
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1082 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1141
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1142 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1201
            YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1202 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1261
            VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1262 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1321
            TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1322 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1381
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

Query: 1382 PLTAKVFEGHLESLGLRDMPHLT 1405
            PLTAKVFEGHLESLGLRDMPHLT
Sbjct: 1321 PLTAKVFEGHLESLGLRDMPHLT 1343

[Close]

BLAST of IVF0007170 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 2681.7 bits (6950), Expect = 0.0e+00
Identity = 1342/1343 (99.93%), Postives = 1342/1343 (99.93%), Query Frame = 0


Query: 62   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 121
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 122  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 181
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 182  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 241
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 242  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 301
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 302  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 361
            QGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 362  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 421
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 422  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 481
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 482  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 541
            SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 542  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 601
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 602  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 661
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 662  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 721
            QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 722  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 781
            TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 782  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 841
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 842  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 901
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 902  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 961
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 962  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 1021
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 1022 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1081
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1082 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1141
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1142 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1201
            YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1202 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1261
            VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1262 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1321
            TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1322 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1381
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

Query: 1382 PLTAKVFEGHLESLGLRDMPHLT 1405
            PLTAKVFEGHLESLGLRDMPHLT
Sbjct: 1321 PLTAKVFEGHLESLGLRDMPHLT 1343

[Close]

BLAST of IVF0007170 vs. ExPASy TrEMBL
Match: A0A5A7TZD7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G001300 PE=4 SV=1)

HSP 1 Score: 2676.0 bits (6935), Expect = 0.0e+00
Identity = 1341/1343 (99.85%), Postives = 1341/1343 (99.85%), Query Frame = 0


Query: 62   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 121
            MTSATLNMLAADKLNGNNYASWKNT NTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNT-NTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 122  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 181
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 182  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 241
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 242  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 301
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 302  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 361
            QGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 362  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 421
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 422  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 481
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 482  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 541
            SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 542  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 601
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 602  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 661
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 662  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 721
            QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 722  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 781
            TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 782  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 841
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 842  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 901
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 902  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 961
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 962  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 1021
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 1022 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1081
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1082 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1141
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1142 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1201
            YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1202 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1261
            VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1262 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1321
            TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1322 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1381
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

Query: 1382 PLTAKVFEGHLESLGLRDMPHLT 1405
            PLTAKVFEGHLESLGLRDMPHLT
Sbjct: 1321 PLTAKVFEGHLESLGLRDMPHLT 1342

[Close]

BLAST of IVF0007170 vs. ExPASy TrEMBL
Match: A0A5D3CSZ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00320 PE=4 SV=1)

HSP 1 Score: 2645.5 bits (6856), Expect = 0.0e+00
Identity = 1325/1325 (100.00%), Postives = 1325/1325 (100.00%), Query Frame = 0


Query: 62   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 121
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 122  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 181
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 182  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 241
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 242  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 301
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 302  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 361
            QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 362  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 421
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 422  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 481
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 482  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 541
            SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 542  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 601
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 602  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 661
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 662  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 721
            QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 722  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 781
            TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 782  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 841
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 842  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 901
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 902  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 961
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 962  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 1021
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 1022 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1081
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1082 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1141
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1142 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1201
            YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1202 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1261
            VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1262 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1321
            TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1322 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1381
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

Query: 1382 PLTAK 1387
            PLTAK
Sbjct: 1321 PLTAK 1325

[Close]

BLAST of IVF0007170 vs. ExPASy TrEMBL
Match: A0A5A7UGV2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G002690 PE=4 SV=1)

HSP 1 Score: 2643.6 bits (6851), Expect = 0.0e+00
Identity = 1324/1325 (99.92%), Postives = 1324/1325 (99.92%), Query Frame = 0


Query: 62   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 121
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 122  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 181
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 182  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 241
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 242  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 301
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 302  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 361
            QGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 362  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 421
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 422  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 481
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 482  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 541
            SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 542  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 601
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 602  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 661
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 662  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 721
            QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 722  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 781
            TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 782  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 841
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 842  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 901
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 902  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 961
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 962  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 1021
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 1022 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1081
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1082 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1141
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1142 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1201
            YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1202 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1261
            VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1262 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1321
            TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1322 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1381
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

Query: 1382 PLTAK 1387
            PLTAK
Sbjct: 1321 PLTAK 1325

[Close]

BLAST of IVF0007170 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2679 bits (6945), Expect = 0.0
Identity = 1343/1343 (100.00%), Postives = 1343/1343 (100.00%), Query Frame = 0


Query: 62   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 121
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 122  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 181
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 182  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 241
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 242  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 301
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 302  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 361
            QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 362  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 421
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 422  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 481
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 482  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 541
            SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 542  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 601
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 602  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 661
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 662  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 721
            QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 722  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 781
            TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 782  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 841
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 842  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 901
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 902  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 961
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 962  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 1021
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 1022 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1081
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1082 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1141
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1142 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1201
            YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1202 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1261
            VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1262 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1321
            TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1322 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1381
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

Query: 1382 PLTAKVFEGHLESLGLRDMPHLT 1404
            PLTAKVFEGHLESLGLRDMPHLT
Sbjct: 1321 PLTAKVFEGHLESLGLRDMPHLT 1343

[Close]

BLAST of IVF0007170 vs. NCBI nr
Match: KAA0031826.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0039313.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0043789.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0048789.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2677 bits (6940), Expect = 0.0
Identity = 1342/1343 (99.93%), Postives = 1342/1343 (99.93%), Query Frame = 0


Query: 62   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 121
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 122  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 181
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 182  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 241
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 242  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 301
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 302  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 361
            QGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 362  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 421
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 422  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 481
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 482  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 541
            SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 542  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 601
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 602  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 661
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 662  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 721
            QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 722  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 781
            TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 782  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 841
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 842  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 901
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 902  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 961
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 962  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 1021
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 1022 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1081
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1082 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1141
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1142 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1201
            YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1202 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1261
            VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1262 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1321
            TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1322 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1381
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

Query: 1382 PLTAKVFEGHLESLGLRDMPHLT 1404
            PLTAKVFEGHLESLGLRDMPHLT
Sbjct: 1321 PLTAKVFEGHLESLGLRDMPHLT 1343

[Close]

BLAST of IVF0007170 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2671 bits (6924), Expect = 0.0
Identity = 1341/1343 (99.85%), Postives = 1341/1343 (99.85%), Query Frame = 0


Query: 62   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 121
            MTSATLNMLAADKLNGNNYASWKNT NTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNT-NTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 122  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 181
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 182  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 241
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 242  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 301
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 302  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 361
            QGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 362  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 421
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 422  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 481
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 482  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 541
            SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 542  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 601
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 602  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 661
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 662  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 721
            QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 722  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 781
            TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 782  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 841
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 842  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 901
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 902  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 961
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 962  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 1021
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 1022 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1081
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1082 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1141
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1142 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1201
            YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1202 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1261
            VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1262 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1321
            TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1322 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1381
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

Query: 1382 PLTAKVFEGHLESLGLRDMPHLT 1404
            PLTAKVFEGHLESLGLRDMPHLT
Sbjct: 1321 PLTAKVFEGHLESLGLRDMPHLT 1342

[Close]

BLAST of IVF0007170 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2642 bits (6848), Expect = 0.0
Identity = 1325/1325 (100.00%), Postives = 1325/1325 (100.00%), Query Frame = 0


Query: 62   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 121
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 122  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 181
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 182  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 241
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 242  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 301
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 302  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 361
            QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 362  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 421
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 422  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 481
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 482  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 541
            SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 542  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 601
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 602  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 661
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 662  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 721
            QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 722  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 781
            TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 782  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 841
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 842  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 901
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 902  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 961
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 962  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 1021
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 1022 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1081
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1082 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1141
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1142 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1201
            YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1202 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1261
            VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1262 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1321
            TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1322 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1381
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

Query: 1382 PLTAK 1386
            PLTAK
Sbjct: 1321 PLTAK 1325

[Close]

BLAST of IVF0007170 vs. NCBI nr
Match: KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2640 bits (6843), Expect = 0.0
Identity = 1324/1325 (99.92%), Postives = 1324/1325 (99.92%), Query Frame = 0


Query: 62   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 121
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 122  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 181
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 182  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 241
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 242  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 301
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 302  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 361
            QGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 362  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 421
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 422  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 481
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 482  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 541
            SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 542  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 601
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 602  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 661
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 662  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 721
            QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 722  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 781
            TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 782  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 841
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 842  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 901
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 902  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 961
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 962  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 1021
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 1022 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1081
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1082 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1141
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1142 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1201
            YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1202 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1261
            VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1262 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1321
            TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1322 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1381
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

Query: 1382 PLTAK 1386
            PLTAK
Sbjct: 1321 PLTAK 1325

[Close]

BLAST of IVF0007170 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 306.2 bits (783), Expect = 1.3e-82
Identity = 172/484 (35.54%), Postives = 277/484 (57.23%), Query Frame = 0


Query: 879  EDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGAD 938
            ++P T+ +A E +    W  AM+ E+ +M     W++   P   KPIGCKW+YK K  +D
Sbjct: 84   KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 939  GKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFL 998
            G ++ +KARLVAKGYTQ EG+D+ ETFSPV  L S++++L+I+A +++ + Q+D+  AFL
Sbjct: 144  GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203

Query: 999  NGNLEETIYMQQPEGFIIPGQE----QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFD 1058
            NG+L+E IYM+ P G+     +      +C L +SIYGLKQASR W ++F   +  +GF 
Sbjct: 204  NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263

Query: 1059 QIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVL 1118
            Q   +   + +I       +++YVDDI++  N+   + ++K  L + F+++DLG  ++ L
Sbjct: 264  QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 323

Query: 1119 GIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEE 1178
            G++I R      + + Q  Y   ++ +  +   K   +P    VT S      +  D  +
Sbjct: 324  GLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH----SGGDFVD 383

Query: 1179 MRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYT 1238
             +   Y   +G LMY  + TR DI +AV  +S++   P LAH  AV  IL Y++ T    
Sbjct: 384  AK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 443

Query: 1239 LVYGSK-DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEY 1298
            L Y S+ ++ L  ++D+ FQ+ +D+R+ST+G    L    + W+S KQ  ++ S+ EAEY
Sbjct: 444  LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 503

Query: 1299 VAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYH 1358
             A   A  E +WL  F  +L++   +SKP  L+CDN+ A+  +     H+R KHIE   H
Sbjct: 504  RALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCH 553

[Close]

BLAST of IVF0007170 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 108.2 bits (269), Expect = 5.4e-23
Identity = 81/236 (34.32%), Postives = 121/236 (51.27%), Query Frame = 0


Query: 1073 FLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQA 1132
            +L+LYVDDILL G+   LL  +   L++ F MKDLG   + LGIQI        L LSQ 
Sbjct: 2    YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQT 61

Query: 1133 SYIDKIVVKYSMQNSK--RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYA 1192
             Y ++I+    M + K     LP +   ++S  + P  P D        + S VG+L Y 
Sbjct: 62   KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSD--------FRSIVGALQYL 121

Query: 1193 MLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTL-VYGSKDLILTGYTD 1252
             L TRPDI YAV IV +    P LA +  +K +L+Y++ T  + L ++ +  L +  + D
Sbjct: 122  TL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 181

Query: 1253 SDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW 1306
            SD+     +R+ST+G    L    + W + +Q  ++ S+ E EY A    A E  W
Sbjct: 182  SDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of IVF0007170 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-15
Identity = 49/131 (37.40%), Postives = 74/131 (56.49%), Query Frame = 0


Query: 851 RRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFN 910
           R    +  L  +Y SLT T T+      ++P +   A++D     W +AM  EL+++  N
Sbjct: 4   RSKAGINKLNPKY-SLTITTTI-----KKEPKSVIFALKD---PGWCQAMQEELDALSRN 63

Query: 911 SVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAM 970
             W LV  P     +GCKW++K K  +DG +   KARLVAKG+ Q EG+ + ET+SPV  
Sbjct: 64  KTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVR 123

Query: 971 LKSIRILLSIA 982
             +IR +L++A
Sbjct: 124 TATIRTILNVA 125

[Close]

BLAST of IVF0007170 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 68.2 bits (165), Expect = 6.1e-11
Identity = 34/86 (39.53%), Postives = 46/86 (53.49%), Query Frame = 0


Query: 499 TQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKR 558
           T    L  + K+   LWH RL H++   +E LVK G L   + +SL  CE C+ GK  + 
Sbjct: 56  TGESNLAETAKDETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRV 115

Query: 559 PFTGKGHRAKEPLELVHSDLCGPMNV 585
            F+   H  K PL+ VHSDL G  +V
Sbjct: 116 NFSTGQHTTKNPLDYVHSDLWGAPSV 141

[Close]

BLAST of IVF0007170 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 54.7 bits (130), Expect = 7.0e-07
Identity = 29/82 (35.37%), Postives = 49/82 (59.76%), Query Frame = 0


Query: 679 NRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHF 738
           NRT+++ VRSM+    LP +F   A  TAV+I+N  PS +++   P ++W     +  + 
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 739 RIWGCPAHVLENNPKKLEPRSK 760
           R +GC A++   +  KL+PR+K
Sbjct: 62  RRFGCVAYI-HCDEGKLKPRAK 82

The following BLAST results are available for this feature:

BLAST of IVF0007170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.1e-219	34.88	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.4e-153	29.17	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	3.2e-137	26.94	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	8.6e-135	26.58	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P25600	3.7e-37	33.76	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of IVF0007170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CPJ6	0.0e+00	100.00	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5A7SMH8	0.0e+00	99.93	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5A7TZD7	0.0e+00	99.85	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G0013...	[more]
A0A5D3CSZ6	0.0e+00	100.00	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G0032...	[more]
A0A5A7UGV2	0.0e+00	99.92	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G00269...	[more]

BLAST of IVF0007170 vs. NCBI nr


Match Name	Identity	Description
KAA0035879.1	100.00	gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi...	[more]
KAA0031826.1	99.93	gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumi...	[more]
KAA0048404.1	99.85	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK14550.1	100.00	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0054490.1	99.92	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of IVF0007170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.3e-82	35.54	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	5.4e-23	34.32	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	1.1e-15	37.40	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00300.1	6.1e-11	39.53	Gag-Pol-related retrotransposon family protein	[more]
ATMG00710.1	7.0e-07	35.37	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 612..632
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 123..254 e-value: 2.7E-17 score: 62.8
None	No IPR available	GENE3D	4.10.60.10		coord: 314..350 e-value: 4.5E-7 score: 31.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 834..853
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 267..307
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 267..290
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 369..1235
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 1245..1386 e-value: 9.91252E-64 score: 210.788
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 323..339 e-value: 2.3E-4 score: 30.5
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 323..339 e-value: 2.9E-5 score: 23.9
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 324..339 score: 10.097754
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 568..669 e-value: 1.2E-10 score: 41.6
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 566..731 score: 23.412086
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 910..1153 e-value: 1.4E-75 score: 254.0
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 563..739 e-value: 3.4E-39 score: 136.2
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 506..555 e-value: 5.4E-14 score: 51.8
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 314..344
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 565..725
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 910..1353

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0007170.1	IVF0007170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding