IVF0006909 (gene) Melon (IVF77) v1

Overview
NameIVF0006909
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGATA transcription factor 18
Locationchr08: 5432678 .. 5433910 (-)
RNA-Seq ExpressionIVF0006909
SyntenyIVF0006909
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTCTAACCAAATCCAAATTCGAAAACACACACACAAAACAAAACAAAACAAAACAAAACAAAAACCAGACCCTTTGTTTTGTGTTTCACCACAAAAAATGATGCAACGTTGTGGTAGCTACCAATGTTACTCTGCAGGAGAGTGTTCTTGTAATGGATATTACGGGCAACAGGGCACTTACTTCTCTTTGCCCACCTACAATAATTACTACGAAACCGAACATTACTCTTTCGAATCTTCTTCTCCGGTTGATTGTACACTCTCTCTCGGAACGCCCTCTACTCGTATGACCGAGTACGACGAGAAGCGCCGTGAAGAACAACACTCTGCTTCTAATTTTACTTGGGATTTACCTCGTACCAAACACCCTCATTCCTCCAAAACCACCCGCCGCAGCAGCGCTAATAGTGGCAGTGATAAATCTAATGCCAATAATGGTGATCAAATGTTCGCTCGTCACTGTGCTAATTGTGACACTACCACTACCCCTCTCTGGCGTAACGGACCTAGCGGCCCTAAGGTAATTTAAATTTTTATCATTTTTTTTTCAAATTTTGTTATGTGGATGAATTTGAGCTGATGGGTTATGATAAATTTAAATTGCAGTCGTTGTGCAATGCGTGTGGGATTAGATACAAGAAGGAAGAAAGAAAAGCAGCGAGTTCAGGGCAACAAGCGAATTCAATGTATAGGAATGAAGCGAGTTCATGGCTACAGCATCATTCTCATAGCCAAAGAACACCGAGATTTTCACATGGTATTGCCAATGAACTCAATCCAAGCGTCGCTTTTCTAACATGGAGTCTCAATGATACAGAGCAACCTCAGCTTTATTATGATTTCACAAGTTGAAAATTATCATCCCACGAGAAAAAAGGATAGAAAAAAAAAAGTCTTTTTTTTTTTGGCAAATGGGAAGAGATGTGGGAGAGTTTTTTTTTCTTTTTTTTCAATTTGTTATTAATATTTACTTTTCTTTTTATACTGGGGAGAAAAAAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAAAAGAGAAAGAAAGGAAGCATTATAATGTTGTTGAAGGATTTTTAAAAGATGGTGAGACGGTTTTATGGAAATACTGTCTCCTCTAAAGAATCCACCTTCATCAATTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTAAATTTTCTCTCTCTCTCTTTTTTTTTTCTTTTAACCTTTCAGAATTTTTTGGCTGC

mRNA sequence

TTTTTCTAACCAAATCCAAATTCGAAAACACACACACAAAACAAAACAAAACAAAACAAAACAAAAACCAGACCCTTTGTTTTGTGTTTCACCACAAAAAATGATGCAACGTTGTGGTAGCTACCAATGTTACTCTGCAGGAGAGTGTTCTTGTAATGGATATTACGGGCAACAGGGCACTTACTTCTCTTTGCCCACCTACAATAATTACTACGAAACCGAACATTACTCTTTCGAATCTTCTTCTCCGGTTGATTGTACACTCTCTCTCGGAACGCCCTCTACTCGTATGACCGAGTACGACGAGAAGCGCCGTGAAGAACAACACTCTGCTTCTAATTTTACTTGGGATTTACCTCGTACCAAACACCCTCATTCCTCCAAAACCACCCGCCGCAGCAGCGCTAATAGTGGCAGTGATAAATCTAATGCCAATAATGGTGATCAAATGTTCGCTCGTCACTGTGCTAATTGTGACACTACCACTACCCCTCTCTGGCGTAACGGACCTAGCGGCCCTAAGTCGTTGTGCAATGCGTGTGGGATTAGATACAAGAAGGAAGAAAGAAAAGCAGCGAGTTCAGGGCAACAAGCGAATTCAATGTATAGGAATGAAGCGAGTTCATGGCTACAGCATCATTCTCATAGCCAAAGAACACCGAGATTTTCACATGGTATTGCCAATGAACTCAATCCAAGCGTCGCTTTTCTAACATGGAGTCTCAATGATACAGAGCAACCTCAGCTTTATTATGATTTCACAAGTTGAAAATTATCATCCCACGAGAAAAAAGGATAGAAAAAAAAAAGTCTTTTTTTTTTTGGCAAATGGGAAGAGATGTGGGAGAGTTTTTTTTTCTTTTTTTTCAATTTGTTATTAATATTTACTTTTCTTTTTATACTGGGGAGAAAAAAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAAAAGAGAAAGAAAGGAAGCATTATAATGTTGTTGAAGGATTTTTAAAAGATGGTGAGACGGTTTTATGGAAATACTGTCTCCTCTAAAGAATCCACCTTCATCAATTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTAAATTTTCTCTCTCTCTCTTTTTTTTTTCTTTTAACCTTTCAGAATTTTTTGGCTGC

Coding sequence (CDS)

ATGATGCAACGTTGTGGTAGCTACCAATGTTACTCTGCAGGAGAGTGTTCTTGTAATGGATATTACGGGCAACAGGGCACTTACTTCTCTTTGCCCACCTACAATAATTACTACGAAACCGAACATTACTCTTTCGAATCTTCTTCTCCGGTTGATTGTACACTCTCTCTCGGAACGCCCTCTACTCGTATGACCGAGTACGACGAGAAGCGCCGTGAAGAACAACACTCTGCTTCTAATTTTACTTGGGATTTACCTCGTACCAAACACCCTCATTCCTCCAAAACCACCCGCCGCAGCAGCGCTAATAGTGGCAGTGATAAATCTAATGCCAATAATGGTGATCAAATGTTCGCTCGTCACTGTGCTAATTGTGACACTACCACTACCCCTCTCTGGCGTAACGGACCTAGCGGCCCTAAGTCGTTGTGCAATGCGTGTGGGATTAGATACAAGAAGGAAGAAAGAAAAGCAGCGAGTTCAGGGCAACAAGCGAATTCAATGTATAGGAATGAAGCGAGTTCATGGCTACAGCATCATTCTCATAGCCAAAGAACACCGAGATTTTCACATGGTATTGCCAATGAACTCAATCCAAGCGTCGCTTTTCTAACATGGAGTCTCAATGATACAGAGCAACCTCAGCTTTATTATGATTTCACAAGTTGA

Protein sequence

MMQRCGSYQCYSAGECSCNGYYGQQGTYFSLPTYNNYYETEHYSFESSSPVDCTLSLGTPSTRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANSGSDKSNANNGDQMFARHCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYRNEASSWLQHHSHSQRTPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS
Homology
BLAST of IVF0006909 vs. ExPASy Swiss-Prot
Match: Q8LC79 (GATA transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=GATA18 PE=1 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 6.3e-32
Identity = 107/280 (38.21%), Postives = 134/280 (47.86%), Query Frame = 0

Query: 5   CGSYQCYSAGECSCNGYYGQQGTY---FSLPTYNNYYETEHYSFESSSPVDCTLSLGTPS 64
           CG +  +S   C  N      G+Y   FS+     + +       SSS VDCTLSLGTPS
Sbjct: 18  CGMFHHHSQSCCYNNNNNSNAGSYSMVFSMQNGGVFEQNGEDYHHSSSLVDCTLSLGTPS 77

Query: 65  TRMTEYDEKRREEQHSA-----SNFTWDLPRTKHPHSSKTT-------------RRSSAN 124
           TR+ E DEKRR    S      SNF WDL  TK+ ++SKT               R  + 
Sbjct: 78  TRLCEEDEKRRRSTSSGASSCISNF-WDLIHTKN-NNSKTAPYNNVPSFSANKPSRGCSG 137

Query: 125 SGSDKSNANNGDQMFARHCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERK-AASSG 184
            G        GD + AR CANCDTT+TPLWRNGP GPKSLCNACGIR+KKEER+  A++G
Sbjct: 138 GGGGGGGGGGGDSLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRTTAATG 197

Query: 185 QQA--------------NSMY----------RNEASSWLQHHSHSQRTP----------- 222
                            NS Y           N  + W  HHS +QR P           
Sbjct: 198 NTVVGAAPVQTDQYGHHNSGYNNYHAATNNNNNNGTPWAHHHS-TQRVPCNYPANEIRFM 257

BLAST of IVF0006909 vs. ExPASy Swiss-Prot
Match: Q6QPM2 (GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2)

HSP 1 Score: 127.1 bits (318), Expect = 2.5e-28
Identity = 85/225 (37.78%), Postives = 112/225 (49.78%), Query Frame = 0

Query: 34  YNNYYETEHYSFESSSP---VDCTLSLGTPSTRMTEYDEKRREEQHSASNFTWDLPRTKH 93
           ++ ++  E+     SSP   VDCTLSLGTPSTR+   D++RR   H++    WD      
Sbjct: 3   FSMFFSPENDVSHHSSPYASVDCTLSLGTPSTRLCNEDDERRFSSHTSDTIGWDF----- 62

Query: 94  PHSSKTTRRSSANSGSDKSNANNGDQMFARHCANCDTTTTPLWRNGPSGPKSLCNACGIR 153
                        +GS K     G  + AR CANCDTT+TPLWRNGP GPKSLCNACGIR
Sbjct: 63  ------------LNGSKKGGGGGGHNLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIR 122

Query: 154 YKKEERKAASSGQ-------------------QANSMYRNE---ASSWLQHHSH-SQRTP 213
           +KKEER+A+++                      AN  Y N    ASS   HH H +QR P
Sbjct: 123 FKKEERRASTARNSTSGGGSTAAGVPTLDHQASANYYYNNNNQYASSSPWHHQHNTQRVP 182

Query: 214 RFSHG-----------IANELNPSVAFLTWSLNDTEQPQLYYDFT 222
            +S             + +    +  FL+W LN  ++  L +DFT
Sbjct: 183 YYSPANNEYSYVDDVRVVDHDVTTDPFLSWRLNVADRTGLVHDFT 210

BLAST of IVF0006909 vs. ExPASy Swiss-Prot
Match: Q9ZPX0 (GATA transcription factor 20 OS=Arabidopsis thaliana OX=3702 GN=GATA20 PE=2 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 5.5e-20
Identity = 66/170 (38.82%), Postives = 90/170 (52.94%), Query Frame = 0

Query: 35  NNYYETEHYSFESSSPVDCTLSLGTPSTRMTEYDEKRREEQHSASNFTWDLPRTKHPHSS 94
           N++    + +F SS+ VDCTLSLGTPSTR+   D+  R    +++N + D     + H  
Sbjct: 22  NHHNYDPYNNFSSSTSVDCTLSLGTPSTRL---DDHHRFSSANSNNISGDF----YIHGG 81

Query: 95  KTTRRSSANSGSDKSNANNGDQMFARHCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKE 154
                S    G   S          R CA+CDTT+TPLWRNGP GPKSLCNACGIR+KKE
Sbjct: 82  NAKTSSYKKGGVAHS--------LPRRCASCDTTSTPLWRNGPKGPKSLCNACGIRFKKE 141

Query: 155 ERKA-------ASSGQQA-----NSMYRNEASSWLQHHSH-SQRTPRFSH 192
           ER+A       +  G  A      + Y    + +  HH H +  +P ++H
Sbjct: 142 ERRATARNLTISGGGSSAAEVPVENSYNGGGNYYSHHHHHYASSSPSWAH 176

BLAST of IVF0006909 vs. ExPASy Swiss-Prot
Match: B8AX51 (GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.2e-18
Identity = 60/136 (44.12%), Postives = 75/136 (55.15%), Query Frame = 0

Query: 44  SFESSSPVDCTLSLGTPSTRMTEYDEKRREEQH------------SASNFTWDLPRTKHP 103
           S  S+  VDCTLSLGTPS+R  E         +            SA+  +WD       
Sbjct: 67  SSSSTGSVDCTLSLGTPSSRRAEPVAAAAPAANHGAPVPAHYPSLSAATVSWDAT----A 126

Query: 104 HSSKTTRRSSANSGSDKSNANNG-DQMFARHCANCDTTTTPLWRNGPSGPKSLCNACGIR 163
            S    ++    +G+ K  A  G D +  R CANC T +TPLWRNGP GPKSLCNACGIR
Sbjct: 127 ESYYCGQQGRPATGAAKCAAGAGHDALLDRRCANCGTASTPLWRNGPRGPKSLCNACGIR 186

Query: 164 YKKEERKAASSGQQAN 167
           YKKEER+AA++   A+
Sbjct: 187 YKKEERRAAATTTTAD 198

BLAST of IVF0006909 vs. ExPASy Swiss-Prot
Match: Q6L5E5 (GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.2e-18
Identity = 60/136 (44.12%), Postives = 75/136 (55.15%), Query Frame = 0

Query: 44  SFESSSPVDCTLSLGTPSTRMTEYDEKRREEQH------------SASNFTWDLPRTKHP 103
           S  S+  VDCTLSLGTPS+R  E         +            SA+  +WD       
Sbjct: 67  SSSSTGSVDCTLSLGTPSSRRAEPVAAAAPAANHGAPVPAHYPSLSAATVSWDAT----A 126

Query: 104 HSSKTTRRSSANSGSDKSNANNG-DQMFARHCANCDTTTTPLWRNGPSGPKSLCNACGIR 163
            S    ++    +G+ K  A  G D +  R CANC T +TPLWRNGP GPKSLCNACGIR
Sbjct: 127 ESYYCGQQGRPATGAAKCAAGAGHDALLDRRCANCGTASTPLWRNGPRGPKSLCNACGIR 186

Query: 164 YKKEERKAASSGQQAN 167
           YKKEER+AA++   A+
Sbjct: 187 YKKEERRAAATTTTAD 198

BLAST of IVF0006909 vs. ExPASy TrEMBL
Match: A0A5A7T229 (GATA transcription factor 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002070 PE=3 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 2.0e-126
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0

Query: 1   MMQRCGSYQCYSAGECSCNGYYGQQGTYFSLPTYNNYYETEHYSFESSSPVDCTLSLGTP 60
           MMQRCGSYQCYSAGECSCNGYYGQQGTYFSLPTYNNYYETEHYSFESSSPVDCTLSLGTP
Sbjct: 1   MMQRCGSYQCYSAGECSCNGYYGQQGTYFSLPTYNNYYETEHYSFESSSPVDCTLSLGTP 60

Query: 61  STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANSGSDKSNANNGDQMFAR 120
           STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANSGSDKSNANNGDQMFAR
Sbjct: 61  STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANSGSDKSNANNGDQMFAR 120

Query: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYRNEASSWLQHH 180
           HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYRNEASSWLQHH
Sbjct: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYRNEASSWLQHH 180

Query: 181 SHSQRTPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 223
           SHSQRTPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS
Sbjct: 181 SHSQRTPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 222

BLAST of IVF0006909 vs. ExPASy TrEMBL
Match: A0A1S3B2I6 (GATA transcription factor 18 OS=Cucumis melo OX=3656 GN=LOC103485050 PE=3 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 2.0e-126
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0

Query: 1   MMQRCGSYQCYSAGECSCNGYYGQQGTYFSLPTYNNYYETEHYSFESSSPVDCTLSLGTP 60
           MMQRCGSYQCYSAGECSCNGYYGQQGTYFSLPTYNNYYETEHYSFESSSPVDCTLSLGTP
Sbjct: 1   MMQRCGSYQCYSAGECSCNGYYGQQGTYFSLPTYNNYYETEHYSFESSSPVDCTLSLGTP 60

Query: 61  STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANSGSDKSNANNGDQMFAR 120
           STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANSGSDKSNANNGDQMFAR
Sbjct: 61  STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANSGSDKSNANNGDQMFAR 120

Query: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYRNEASSWLQHH 180
           HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYRNEASSWLQHH
Sbjct: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYRNEASSWLQHH 180

Query: 181 SHSQRTPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 223
           SHSQRTPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS
Sbjct: 181 SHSQRTPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 222

BLAST of IVF0006909 vs. ExPASy TrEMBL
Match: A0A0A0KKD2 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G502700 PE=3 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 6.6e-117
Identity = 208/222 (93.69%), Postives = 212/222 (95.50%), Query Frame = 0

Query: 1   MMQRCGSYQCYSAGECSCNGYYGQQGTYFSLPTYNNYYETEHYSFESSSPVDCTLSLGTP 60
           MMQRCGSYQCYSAGECSCNG+YGQQGTYFS+P+YNNYYETEHYSFESSSPVDCTLSLGTP
Sbjct: 1   MMQRCGSYQCYSAGECSCNGFYGQQGTYFSMPSYNNYYETEHYSFESSSPVDCTLSLGTP 60

Query: 61  STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANSGSDKSNANNGDQMFAR 120
           STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSAN GSDKSNANNGDQMFAR
Sbjct: 61  STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANIGSDKSNANNGDQMFAR 120

Query: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYRNEASSWLQHH 180
           HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQ        ASSWLQHH
Sbjct: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQ--------ASSWLQHH 180

Query: 181 SHSQRTPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 223
           SHSQ+ PRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS
Sbjct: 181 SHSQKAPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 214

BLAST of IVF0006909 vs. ExPASy TrEMBL
Match: A0A6J1IUC2 (GATA transcription factor 18-like OS=Cucurbita maxima OX=3661 GN=LOC111478501 PE=3 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 6.0e-110
Identity = 196/222 (88.29%), Postives = 207/222 (93.24%), Query Frame = 0

Query: 1   MMQRCGSYQCYSAGECSCNGYYGQQGTYFSLPTYNNYYETEHYSFESSSPVDCTLSLGTP 60
           MMQRCGSYQCYSAGECSC  +YGQQG+YFS P YNNYYE+EHYSF+SSSPVDCTLSLGTP
Sbjct: 1   MMQRCGSYQCYSAGECSCGAFYGQQGSYFSTPAYNNYYESEHYSFDSSSPVDCTLSLGTP 60

Query: 61  STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANSGSDKSNANNGDQMFAR 120
           STRMTEYDEKRREEQHSASNF WDL RTKH HSSKT+RR S N+G DKS A NGDQMF+R
Sbjct: 61  STRMTEYDEKRREEQHSASNFAWDLSRTKHGHSSKTSRR-SGNTGGDKSRA-NGDQMFSR 120

Query: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYRNEASSWLQHH 180
           HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMY+NEASSWLQHH
Sbjct: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYKNEASSWLQHH 180

Query: 181 SHSQRTPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 223
           SHSQ+TPRF HGI N+LNP VAFL+WSLNDTEQPQLYYDFTS
Sbjct: 181 SHSQKTPRFPHGITNDLNPGVAFLSWSLNDTEQPQLYYDFTS 220

BLAST of IVF0006909 vs. ExPASy TrEMBL
Match: A0A6J1GDX7 (GATA transcription factor 18-like OS=Cucurbita moschata OX=3662 GN=LOC111453070 PE=3 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.0e-109
Identity = 195/222 (87.84%), Postives = 206/222 (92.79%), Query Frame = 0

Query: 1   MMQRCGSYQCYSAGECSCNGYYGQQGTYFSLPTYNNYYETEHYSFESSSPVDCTLSLGTP 60
           MMQRCGSYQCYSAGECSC  +Y QQG+YFS P YNNYYE+EHYSF+SSSPVDCTLSLGTP
Sbjct: 1   MMQRCGSYQCYSAGECSCGAFYAQQGSYFSTPAYNNYYESEHYSFDSSSPVDCTLSLGTP 60

Query: 61  STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANSGSDKSNANNGDQMFAR 120
           STRMTEYDEKRREEQHSASNF WDL RTKH HSSKT+RR S N+G DKS A NGDQMF+R
Sbjct: 61  STRMTEYDEKRREEQHSASNFAWDLSRTKHGHSSKTSRR-SGNTGGDKSRA-NGDQMFSR 120

Query: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYRNEASSWLQHH 180
           HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMY+NEASSWLQHH
Sbjct: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYKNEASSWLQHH 180

Query: 181 SHSQRTPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 223
           SHSQ+TPRF HGI N+LNP VAFL+WSLNDTEQPQLYYDFTS
Sbjct: 181 SHSQKTPRFPHGITNDLNPGVAFLSWSLNDTEQPQLYYDFTS 220

BLAST of IVF0006909 vs. NCBI nr
Match: XP_008440715.1 (PREDICTED: GATA transcription factor 18 [Cucumis melo] >KAA0036226.1 GATA transcription factor 18 [Cucumis melo var. makuwa] >TYK12620.1 GATA transcription factor 18 [Cucumis melo var. makuwa])

HSP 1 Score: 465 bits (1196), Expect = 1.69e-165
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0

Query: 1   MMQRCGSYQCYSAGECSCNGYYGQQGTYFSLPTYNNYYETEHYSFESSSPVDCTLSLGTP 60
           MMQRCGSYQCYSAGECSCNGYYGQQGTYFSLPTYNNYYETEHYSFESSSPVDCTLSLGTP
Sbjct: 1   MMQRCGSYQCYSAGECSCNGYYGQQGTYFSLPTYNNYYETEHYSFESSSPVDCTLSLGTP 60

Query: 61  STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANSGSDKSNANNGDQMFAR 120
           STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANSGSDKSNANNGDQMFAR
Sbjct: 61  STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANSGSDKSNANNGDQMFAR 120

Query: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYRNEASSWLQHH 180
           HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYRNEASSWLQHH
Sbjct: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYRNEASSWLQHH 180

Query: 181 SHSQRTPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 222
           SHSQRTPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS
Sbjct: 181 SHSQRTPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 222

BLAST of IVF0006909 vs. NCBI nr
Match: XP_004143515.1 (GATA transcription factor 18 [Cucumis sativus] >KGN48832.1 hypothetical protein Csa_002842 [Cucumis sativus])

HSP 1 Score: 434 bits (1115), Expect = 2.84e-153
Identity = 208/222 (93.69%), Postives = 212/222 (95.50%), Query Frame = 0

Query: 1   MMQRCGSYQCYSAGECSCNGYYGQQGTYFSLPTYNNYYETEHYSFESSSPVDCTLSLGTP 60
           MMQRCGSYQCYSAGECSCNG+YGQQGTYFS+P+YNNYYETEHYSFESSSPVDCTLSLGTP
Sbjct: 1   MMQRCGSYQCYSAGECSCNGFYGQQGTYFSMPSYNNYYETEHYSFESSSPVDCTLSLGTP 60

Query: 61  STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANSGSDKSNANNGDQMFAR 120
           STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSAN GSDKSNANNGDQMFAR
Sbjct: 61  STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANIGSDKSNANNGDQMFAR 120

Query: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYRNEASSWLQHH 180
           HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQA        SSWLQHH
Sbjct: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQA--------SSWLQHH 180

Query: 181 SHSQRTPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 222
           SHSQ+ PRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS
Sbjct: 181 SHSQKAPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 214

BLAST of IVF0006909 vs. NCBI nr
Match: XP_038883344.1 (GATA transcription factor 18 [Benincasa hispida])

HSP 1 Score: 426 bits (1095), Expect = 4.10e-150
Identity = 206/223 (92.38%), Postives = 214/223 (95.96%), Query Frame = 0

Query: 1   MMQRCGSYQCYSAGECSCNGYYGQQGTYFSLPTYNNYYETEHYSFESSSPVDCTLSLGTP 60
           MMQRCGSYQCYSAGECSC G+YGQQG+YFS+PTYNNYYETEHYSFESSSPVDCTLSLGTP
Sbjct: 1   MMQRCGSYQCYSAGECSCGGFYGQQGSYFSMPTYNNYYETEHYSFESSSPVDCTLSLGTP 60

Query: 61  STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANSGSDKSNANNGDQMFAR 120
           STRMTEYDEKRREEQH ASNFTWDLPRTKHPHSSKTTRR  ANSG+DKSNAN  DQMFAR
Sbjct: 61  STRMTEYDEKRREEQHPASNFTWDLPRTKHPHSSKTTRRG-ANSGADKSNAN-ADQMFAR 120

Query: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANS-MYRNEASSWLQH 180
           HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQ AN+ MYRNEASSWLQH
Sbjct: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQPANAIMYRNEASSWLQH 180

Query: 181 HSHSQRTPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 222
           H+HSQRTPRF+HGI NELNPSVAFL+WSLNDTEQPQLYYDFTS
Sbjct: 181 HTHSQRTPRFAHGITNELNPSVAFLSWSLNDTEQPQLYYDFTS 221

BLAST of IVF0006909 vs. NCBI nr
Match: XP_022978554.1 (GATA transcription factor 18-like [Cucurbita maxima])

HSP 1 Score: 410 bits (1055), Expect = 4.95e-144
Identity = 196/222 (88.29%), Postives = 207/222 (93.24%), Query Frame = 0

Query: 1   MMQRCGSYQCYSAGECSCNGYYGQQGTYFSLPTYNNYYETEHYSFESSSPVDCTLSLGTP 60
           MMQRCGSYQCYSAGECSC  +YGQQG+YFS P YNNYYE+EHYSF+SSSPVDCTLSLGTP
Sbjct: 1   MMQRCGSYQCYSAGECSCGAFYGQQGSYFSTPAYNNYYESEHYSFDSSSPVDCTLSLGTP 60

Query: 61  STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANSGSDKSNANNGDQMFAR 120
           STRMTEYDEKRREEQHSASNF WDL RTKH HSSKT+RRS  N+G DKS AN GDQMF+R
Sbjct: 61  STRMTEYDEKRREEQHSASNFAWDLSRTKHGHSSKTSRRS-GNTGGDKSRAN-GDQMFSR 120

Query: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYRNEASSWLQHH 180
           HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMY+NEASSWLQHH
Sbjct: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYKNEASSWLQHH 180

Query: 181 SHSQRTPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 222
           SHSQ+TPRF HGI N+LNP VAFL+WSLNDTEQPQLYYDFTS
Sbjct: 181 SHSQKTPRFPHGITNDLNPGVAFLSWSLNDTEQPQLYYDFTS 220

BLAST of IVF0006909 vs. NCBI nr
Match: XP_022949779.1 (GATA transcription factor 18-like [Cucurbita moschata] >XP_023544803.1 GATA transcription factor 18-like [Cucurbita pepo subsp. pepo] >KAG7034143.1 GATA transcription factor 18, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 408 bits (1049), Expect = 4.07e-143
Identity = 195/222 (87.84%), Postives = 206/222 (92.79%), Query Frame = 0

Query: 1   MMQRCGSYQCYSAGECSCNGYYGQQGTYFSLPTYNNYYETEHYSFESSSPVDCTLSLGTP 60
           MMQRCGSYQCYSAGECSC  +Y QQG+YFS P YNNYYE+EHYSF+SSSPVDCTLSLGTP
Sbjct: 1   MMQRCGSYQCYSAGECSCGAFYAQQGSYFSTPAYNNYYESEHYSFDSSSPVDCTLSLGTP 60

Query: 61  STRMTEYDEKRREEQHSASNFTWDLPRTKHPHSSKTTRRSSANSGSDKSNANNGDQMFAR 120
           STRMTEYDEKRREEQHSASNF WDL RTKH HSSKT+RRS  N+G DKS AN GDQMF+R
Sbjct: 61  STRMTEYDEKRREEQHSASNFAWDLSRTKHGHSSKTSRRS-GNTGGDKSRAN-GDQMFSR 120

Query: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYRNEASSWLQHH 180
           HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMY+NEASSWLQHH
Sbjct: 121 HCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKAASSGQQANSMYKNEASSWLQHH 180

Query: 181 SHSQRTPRFSHGIANELNPSVAFLTWSLNDTEQPQLYYDFTS 222
           SHSQ+TPRF HGI N+LNP VAFL+WSLNDTEQPQLYYDFTS
Sbjct: 181 SHSQKTPRFPHGITNDLNPGVAFLSWSLNDTEQPQLYYDFTS 220

BLAST of IVF0006909 vs. TAIR 10
Match: AT3G50870.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 139.0 bits (349), Expect = 4.5e-33
Identity = 107/280 (38.21%), Postives = 134/280 (47.86%), Query Frame = 0

Query: 5   CGSYQCYSAGECSCNGYYGQQGTY---FSLPTYNNYYETEHYSFESSSPVDCTLSLGTPS 64
           CG +  +S   C  N      G+Y   FS+     + +       SSS VDCTLSLGTPS
Sbjct: 18  CGMFHHHSQSCCYNNNNNSNAGSYSMVFSMQNGGVFEQNGEDYHHSSSLVDCTLSLGTPS 77

Query: 65  TRMTEYDEKRREEQHSA-----SNFTWDLPRTKHPHSSKTT-------------RRSSAN 124
           TR+ E DEKRR    S      SNF WDL  TK+ ++SKT               R  + 
Sbjct: 78  TRLCEEDEKRRRSTSSGASSCISNF-WDLIHTKN-NNSKTAPYNNVPSFSANKPSRGCSG 137

Query: 125 SGSDKSNANNGDQMFARHCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERK-AASSG 184
            G        GD + AR CANCDTT+TPLWRNGP GPKSLCNACGIR+KKEER+  A++G
Sbjct: 138 GGGGGGGGGGGDSLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRTTAATG 197

Query: 185 QQA--------------NSMY----------RNEASSWLQHHSHSQRTP----------- 222
                            NS Y           N  + W  HHS +QR P           
Sbjct: 198 NTVVGAAPVQTDQYGHHNSGYNNYHAATNNNNNNGTPWAHHHS-TQRVPCNYPANEIRFM 257

BLAST of IVF0006909 vs. TAIR 10
Match: AT4G36620.1 (GATA transcription factor 19 )

HSP 1 Score: 127.1 bits (318), Expect = 1.8e-29
Identity = 85/225 (37.78%), Postives = 112/225 (49.78%), Query Frame = 0

Query: 34  YNNYYETEHYSFESSSP---VDCTLSLGTPSTRMTEYDEKRREEQHSASNFTWDLPRTKH 93
           ++ ++  E+     SSP   VDCTLSLGTPSTR+   D++RR   H++    WD      
Sbjct: 3   FSMFFSPENDVSHHSSPYASVDCTLSLGTPSTRLCNEDDERRFSSHTSDTIGWDF----- 62

Query: 94  PHSSKTTRRSSANSGSDKSNANNGDQMFARHCANCDTTTTPLWRNGPSGPKSLCNACGIR 153
                        +GS K     G  + AR CANCDTT+TPLWRNGP GPKSLCNACGIR
Sbjct: 63  ------------LNGSKKGGGGGGHNLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIR 122

Query: 154 YKKEERKAASSGQ-------------------QANSMYRNE---ASSWLQHHSH-SQRTP 213
           +KKEER+A+++                      AN  Y N    ASS   HH H +QR P
Sbjct: 123 FKKEERRASTARNSTSGGGSTAAGVPTLDHQASANYYYNNNNQYASSSPWHHQHNTQRVP 182

Query: 214 RFSHG-----------IANELNPSVAFLTWSLNDTEQPQLYYDFT 222
            +S             + +    +  FL+W LN  ++  L +DFT
Sbjct: 183 YYSPANNEYSYVDDVRVVDHDVTTDPFLSWRLNVADRTGLVHDFT 210

BLAST of IVF0006909 vs. TAIR 10
Match: AT2G18380.1 (GATA transcription factor 20 )

HSP 1 Score: 99.4 bits (246), Expect = 3.9e-21
Identity = 66/170 (38.82%), Postives = 90/170 (52.94%), Query Frame = 0

Query: 35  NNYYETEHYSFESSSPVDCTLSLGTPSTRMTEYDEKRREEQHSASNFTWDLPRTKHPHSS 94
           N++    + +F SS+ VDCTLSLGTPSTR+   D+  R    +++N + D     + H  
Sbjct: 22  NHHNYDPYNNFSSSTSVDCTLSLGTPSTRL---DDHHRFSSANSNNISGDF----YIHGG 81

Query: 95  KTTRRSSANSGSDKSNANNGDQMFARHCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKE 154
                S    G   S          R CA+CDTT+TPLWRNGP GPKSLCNACGIR+KKE
Sbjct: 82  NAKTSSYKKGGVAHS--------LPRRCASCDTTSTPLWRNGPKGPKSLCNACGIRFKKE 141

Query: 155 ERKA-------ASSGQQA-----NSMYRNEASSWLQHHSH-SQRTPRFSH 192
           ER+A       +  G  A      + Y    + +  HH H +  +P ++H
Sbjct: 142 ERRATARNLTISGGGSSAAEVPVENSYNGGGNYYSHHHHHYASSSPSWAH 176

BLAST of IVF0006909 vs. TAIR 10
Match: AT4G26150.1 (cytokinin-responsive gata factor 1 )

HSP 1 Score: 68.2 bits (165), Expect = 9.7e-12
Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = 0

Query: 99  RSSANSGSDKSNANNGDQMFARHCANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEERKA 158
           +SS  S S++ N  N D +  R C++C+TT TPLWR+GP GPKSLCNACGIR +K  R A
Sbjct: 179 QSSNLSNSERQNGYNNDCVI-RICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAA 238

Query: 159 ASS 162
            ++
Sbjct: 239 MAT 240

BLAST of IVF0006909 vs. TAIR 10
Match: AT5G56860.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 65.5 bits (158), Expect = 6.3e-11
Identity = 46/132 (34.85%), Postives = 65/132 (49.24%), Query Frame = 0

Query: 35  NNYYETEHYSFESSSPVDCTLSLGTPSTRMTEYDEKRREEQHSASNFTWDLPRTKHPHSS 94
           NN+ E++HY                P    T +D    E+ H   NF       K+  + 
Sbjct: 171 NNHKESDHY----------------PLNHKTNFD----EDHHEDLNF-------KNVLTR 230

Query: 95  KTTRRSSANS-GSDKSNANNGDQMFARHCANCDTTTTPLWRNGPSGPKSLCNACGIRYKK 154
           KTT  ++ N   +   N  + +    R C++C+TT TPLWR+GP GPKSLCNACGIR +K
Sbjct: 231 KTTAATTENRYNTINENGYSNNNGVIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRK 275

Query: 155 EERKAASSGQQA 166
             R A ++   A
Sbjct: 291 ARRAAMAAAAAA 275

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8LC796.3e-3238.21GATA transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=GATA18 PE=1 SV=2[more]
Q6QPM22.5e-2837.78GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2[more]
Q9ZPX05.5e-2038.82GATA transcription factor 20 OS=Arabidopsis thaliana OX=3702 GN=GATA20 PE=2 SV=2[more]
B8AX515.2e-1844.12GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE... [more]
Q6L5E55.2e-1844.12GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 ... [more]
Match NameE-valueIdentityDescription
A0A5A7T2292.0e-126100.00GATA transcription factor 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A1S3B2I62.0e-126100.00GATA transcription factor 18 OS=Cucumis melo OX=3656 GN=LOC103485050 PE=3 SV=1[more]
A0A0A0KKD26.6e-11793.69GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G502700 P... [more]
A0A6J1IUC26.0e-11088.29GATA transcription factor 18-like OS=Cucurbita maxima OX=3661 GN=LOC111478501 PE... [more]
A0A6J1GDX73.0e-10987.84GATA transcription factor 18-like OS=Cucurbita moschata OX=3662 GN=LOC111453070 ... [more]
Match NameE-valueIdentityDescription
XP_008440715.11.69e-165100.00PREDICTED: GATA transcription factor 18 [Cucumis melo] >KAA0036226.1 GATA transc... [more]
XP_004143515.12.84e-15393.69GATA transcription factor 18 [Cucumis sativus] >KGN48832.1 hypothetical protein ... [more]
XP_038883344.14.10e-15092.38GATA transcription factor 18 [Benincasa hispida][more]
XP_022978554.14.95e-14488.29GATA transcription factor 18-like [Cucurbita maxima][more]
XP_022949779.14.07e-14387.84GATA transcription factor 18-like [Cucurbita moschata] >XP_023544803.1 GATA tran... [more]
Match NameE-valueIdentityDescription
AT3G50870.14.5e-3338.21GATA type zinc finger transcription factor family protein [more]
AT4G36620.11.8e-2937.78GATA transcription factor 19 [more]
AT2G18380.13.9e-2138.82GATA transcription factor 20 [more]
AT4G26150.19.7e-1253.97cytokinin-responsive gata factor 1 [more]
AT5G56860.16.3e-1134.85GATA type zinc finger transcription factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000679Zinc finger, GATA-typeSMARTSM00401GATA_3coord: 116..173
e-value: 2.0E-18
score: 77.2
IPR000679Zinc finger, GATA-typePFAMPF00320GATAcoord: 122..156
e-value: 3.0E-18
score: 65.1
IPR000679Zinc finger, GATA-typePROSITEPS00344GATA_ZN_FINGER_1coord: 122..147
IPR000679Zinc finger, GATA-typePROSITEPS50114GATA_ZN_FINGER_2coord: 116..152
score: 14.245893
IPR000679Zinc finger, GATA-typeCDDcd00202ZnF_GATAcoord: 122..153
e-value: 7.65143E-14
score: 62.005
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 118..186
e-value: 2.6E-17
score: 64.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..115
NoneNo IPR availablePANTHERPTHR46813:SF5GATA TRANSCRIPTION FACTOR 18coord: 1..219
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 119..157
IPR044272GATA transcription factor 18/19/20PANTHERPTHR46813GATA TRANSCRIPTION FACTOR 18coord: 1..219

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0006909.1IVF0006909.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009908 flower development
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding