IVF0006872 (gene) Melon (IVF77) v1

Overview


Name	IVF0006872
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	GATA-N domain-containing protein
Location	chr10: 12355057 .. 12356586 (-)
RNA-Seq Expression	IVF0006872
Synteny	IVF0006872

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTCCCTAGTACGACACAAACATGTGAATCTCAAGAGTCAATCTCCCATCTCTTTGGTAGGCATAAATGAATTGAACTATTATATTCCTAAGATTAATAACCAAGCATAAAAAAATCAAGTGGCCATGGAAAATGGAGAAATCAAGAGTATCAGACAAAGCCACGTAGCTCCACTCCAGGGCAACCACAACGACCAATCACTGCTGACCTCAAATTTTCACTTATAAGCCCTGAGCAACTCCTCGTTCATGGCGGATAATCGTCGAGGTCGCCGTCGATCCTATAAATTTGAGGTTCAATTGAACGAACTAACCGGCGGCGACGATGGTGGCGATTTCTCCGTCTCACGGGGGGTTCCCATCGCAATTAGGGCAGGGATGGAAGTCTGTAAGGGGGAGGCCTGATAGGAGGAGCTCCAATTTGAGAGTAATGGCGGAGAAGGGCGAGGAGAGAGAAAGCGTCGGAGGAGAGAATAAGAAATCGCTGTTCAGCAGTGTGACGGAGGCGTTGGATTTCTCGGCAGTGCGATCGAGTCGCGACGCCGAGCTCCTCGACGATGCCCGCCAGGCCACCAAAGCGGGCGGCAGAATGACCCGTGAACAGGTGGGTACTTATTTGTTTGTCACAATGAATGTATTATCAATTATGGGTAATATCTGGGTTTATGATTTCCCTCTCATACAAATTAGGATCGTACAATTTTGTGAAATGAACGAACACAAATATTTAGATAACTTTCTTAATTCAATTATCCAAAACGAACAGATCTGCAGTTCCTATTTTGTGTATAACTCTGATAGGAGGAGCTACACACTTTTTCTTAATGATCTAAAGTCTACTTCTACATTATGCATTTGCATGGTATGGTTTGGATGCAGTACGGAGCTTTAAGAAGGAAAATTGGAGGGACCTACAAGGACTTCTTCAAATCTTACATCGAAGGTACTCTTCCAACCCTTAATCATTTGTTTACCTTATAAATTAACTTTTAAATTATCTTTTTATCGATTAAAATCCTAAACTTACTTTATTTCATTTCATTACTATATACTCTCCCTTATATTTCATTTAAATAAATTTACATCAAATTACCCCTTTCGTTTCATTTTCTTTTAGATAAAAGCCTCAAAAACTTATGTTGACTCATTATCAAAATTAATGTAAAATATTGGGTTTTTTGAATGGATAAAAATAGTGGATGGACAATATGTTGAAGAAGGGTGGGTGGACAAGACATGCAAGGTGTGCAAGAAGGACACAAGAGGAGAAGCAAGACAAGTTGACAAACTTGGAAGATACGTTCATGTTGCTTGTTTGGAGAAATCCAACTCTTCCTCGGGGAATTTCTTTTCCAAGCTCTTCTCCAAATGAAAACAAAAGTTAGATTTAAGTATATAAATATGACCATATAAATTTGAAATTGTGCAACGTGTATTTGGTTCATAAGTTTAGAGAACATTGTATCATATAAATTTTGAGTTTCAGTTTTATATATACAATTGTGAGAGATATAGATCAAATAAGCATAGT

mRNA sequence

TGTCCCTAGTACGACACAAACATGTGAATCTCAAGAGTCAATCTCCCATCTCTTTGGTAGGCATAAATGAATTGAACTATTATATTCCTAAGATTAATAACCAAGCATAAAAAAATCAAGTGGCCATGGAAAATGGAGAAATCAAGAGTATCAGACAAAGCCACGTAGCTCCACTCCAGGGCAACCACAACGACCAATCACTGCTGACCTCAAATTTTCACTTATAAGCCCTGAGCAACTCCTCGTTCATGGCGGATAATCGTCGAGGTCGCCGTCGATCCTATAAATTTGAGGTTCAATTGAACGAACTAACCGGCGGCGACGATGGTGGCGATTTCTCCGTCTCACGGGGGGTTCCCATCGCAATTAGGGCAGGGATGGAAGTCTGTAAGGGGGAGGCCTGATAGGAGGAGCTCCAATTTGAGAGTAATGGCGGAGAAGGGCGAGGAGAGAGAAAGCGTCGGAGGAGAGAATAAGAAATCGCTGTTCAGCAGTGTGACGGAGGCGTTGGATTTCTCGGCAGTGCGATCGAGTCGCGACGCCGAGCTCCTCGACGATGCCCGCCAGGCCACCAAAGCGGGCGGCAGAATGACCCGTGAACAGTACGGAGCTTTAAGAAGGAAAATTGGAGGGACCTACAAGGACTTCTTCAAATCTTACATCGAAGTGGATGGACAATATGTTGAAGAAGGGTGGGTGGACAAGACATGCAAGGTGTGCAAGAAGGACACAAGAGGAGAAGCAAGACAAGTTGACAAACTTGGAAGATACGTTCATGTTGCTTGTTTGGAGAAATCCAACTCTTCCTCGGGGAATTTCTTTTCCAAGCTCTTCTCCAAATGAAAACAAAAGTTAGATTTAAGTATATAAATATGACCATATAAATTTGAAATTGTGCAACGTGTATTTGGTTCATAAGTTTAGAGAACATTGTATCATATAAATTTTGAGTTTCAGTTTTATATATACAATTGTGAGAGATATAGATCAAATAAGCATAGT

Coding sequence (CDS)

ATGGTGGCGATTTCTCCGTCTCACGGGGGGTTCCCATCGCAATTAGGGCAGGGATGGAAGTCTGTAAGGGGGAGGCCTGATAGGAGGAGCTCCAATTTGAGAGTAATGGCGGAGAAGGGCGAGGAGAGAGAAAGCGTCGGAGGAGAGAATAAGAAATCGCTGTTCAGCAGTGTGACGGAGGCGTTGGATTTCTCGGCAGTGCGATCGAGTCGCGACGCCGAGCTCCTCGACGATGCCCGCCAGGCCACCAAAGCGGGCGGCAGAATGACCCGTGAACAGTACGGAGCTTTAAGAAGGAAAATTGGAGGGACCTACAAGGACTTCTTCAAATCTTACATCGAAGTGGATGGACAATATGTTGAAGAAGGGTGGGTGGACAAGACATGCAAGGTGTGCAAGAAGGACACAAGAGGAGAAGCAAGACAAGTTGACAAACTTGGAAGATACGTTCATGTTGCTTGTTTGGAGAAATCCAACTCTTCCTCGGGGAATTTCTTTTCCAAGCTCTTCTCCAAATGA

Protein sequence

MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK

Homology

[Close]

BLAST of IVF0006872 vs. ExPASy TrEMBL
Match: A0A1S3C3X8 (uncharacterized protein LOC103496731 OS=Cucumis melo OX=3656 GN=LOC103496731 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 1.8e-90
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTE 60
           MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTE
Sbjct: 1   MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTE 60

Query: 61  ALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYV 120
           ALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYV
Sbjct: 61  ALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYV 120

Query: 121 EEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK 173
           EEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK
Sbjct: 121 EEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK 172

[Close]

BLAST of IVF0006872 vs. ExPASy TrEMBL
Match: A0A5D3DFR3 (GATA-N domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold530G00350 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 1.8e-90
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTE 60
           MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTE
Sbjct: 1   MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTE 60

Query: 61  ALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYV 120
           ALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYV
Sbjct: 61  ALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYV 120

Query: 121 EEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK 173
           EEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK
Sbjct: 121 EEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK 172

[Close]

BLAST of IVF0006872 vs. ExPASy TrEMBL
Match: A0A0A0KM41 (GATA-N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G220390 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.6e-86
Identity = 165/172 (95.93%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTE 60
           MVAI PSHGGFPSQLGQGWKSVRGRPDRRSSNLRV AEKGEERES GGENKKSLFSSVTE
Sbjct: 1   MVAICPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVRAEKGEERESGGGENKKSLFSSVTE 60

Query: 61  ALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYV 120
           ALDFSAVRS+RDAELLDDARQATKAGGRM+REQYGALRRKIGGTYKDFFKSYIEVDGQYV
Sbjct: 61  ALDFSAVRSTRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVDGQYV 120

Query: 121 EEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK 173
           EEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSS GNFFSK FSK
Sbjct: 121 EEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSPGNFFSKFFSK 172

[Close]

BLAST of IVF0006872 vs. ExPASy TrEMBL
Match: A0A6J1FPP4 (uncharacterized protein LOC111447101 OS=Cucurbita moschata OX=3662 GN=LOC111447101 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.5e-72
Identity = 150/177 (84.75%), Postives = 155/177 (87.57%), Query Frame = 0


Query: 1   MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMA---EKGEERESVGGE--NKKSLF 60
           MVAISPSH GF SQ GQGWK+ R     RSSNLRV A   EKGEE+E  GGE  NK+SLF
Sbjct: 1   MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKED-GGERKNKQSLF 60

Query: 61  SSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEV 120
           SSVTEALDFS VRSSRDAELLDDARQATKAGGRM+REQYGALRRKIGGTYKDFFKSYIEV
Sbjct: 61  SSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEV 120

Query: 121 DGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK 173
           DGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLEKSNSSS NFF+K F K
Sbjct: 121 DGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK 176

[Close]

BLAST of IVF0006872 vs. ExPASy TrEMBL
Match: A0A6J1K2I3 (uncharacterized protein LOC111491808 OS=Cucurbita maxima OX=3661 GN=LOC111491808 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.0e-69
Identity = 145/177 (81.92%), Postives = 154/177 (87.01%), Query Frame = 0


Query: 1   MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMA---EKGEERESVGGE--NKKSLF 60
           MVAISPS+ GF SQ GQGWK+ R     RSSNLRV A   EKGEE+E  G E  NK+SLF
Sbjct: 1   MVAISPSNVGFTSQFGQGWKTAREMTPVRSSNLRVSAKATEKGEEKED-GSERKNKQSLF 60

Query: 61  SSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEV 120
           SSVTEALDFS VRSSRDAELL+DARQATK+GGRM++EQYGALRRKIGGTYKDFFKSYIEV
Sbjct: 61  SSVTEALDFSQVRSSRDAELLEDARQATKSGGRMSQEQYGALRRKIGGTYKDFFKSYIEV 120

Query: 121 DGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK 173
           DGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLEKSNSSS NFF+K F K
Sbjct: 121 DGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK 176

[Close]

BLAST of IVF0006872 vs. NCBI nr
Match: XP_008456929.1 (PREDICTED: uncharacterized protein LOC103496731 [Cucumis melo] >XP_016902036.1 PREDICTED: uncharacterized protein LOC103496731 [Cucumis melo] >KAA0067508.1 uncharacterized protein E6C27_scaffold50G00230 [Cucumis melo var. makuwa] >TYK22436.1 uncharacterized protein E5676_scaffold530G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 343 bits (881), Expect = 3.99e-119
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTE 60
           MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTE
Sbjct: 1   MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTE 60

Query: 61  ALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYV 120
           ALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYV
Sbjct: 61  ALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYV 120

Query: 121 EEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK 172
           EEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK
Sbjct: 121 EEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK 172

[Close]

BLAST of IVF0006872 vs. NCBI nr
Match: XP_004146444.1 (uncharacterized protein LOC101211273 [Cucumis sativus] >KGN50725.1 hypothetical protein Csa_005781 [Cucumis sativus])

HSP 1 Score: 330 bits (847), Expect = 6.10e-114
Identity = 165/172 (95.93%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGGENKKSLFSSVTE 60
           MVAI PSHGGFPSQLGQGWKSVRGRPDRRSSNLRV AEKGEERES GGENKKSLFSSVTE
Sbjct: 1   MVAICPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVRAEKGEERESGGGENKKSLFSSVTE 60

Query: 61  ALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVDGQYV 120
           ALDFSAVRS+RDAELLDDARQATKAGGRM+REQYGALRRKIGGTYKDFFKSYIEVDGQYV
Sbjct: 61  ALDFSAVRSTRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVDGQYV 120

Query: 121 EEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK 172
           EEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSS GNFFSK FSK
Sbjct: 121 EEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSPGNFFSKFFSK 172

[Close]

BLAST of IVF0006872 vs. NCBI nr
Match: XP_038891315.1 (uncharacterized protein LOC120080762 [Benincasa hispida])

HSP 1 Score: 317 bits (811), Expect = 2.16e-108
Identity = 166/177 (93.79%), Postives = 168/177 (94.92%), Query Frame = 0


Query: 1   MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMA---EKGEERESVGG--ENKKSLF 60
           MVAISPSHGGFPSQL QGWK+VRGRPDR SSNLRV+A   EKGEERES GG  ENKKSLF
Sbjct: 1   MVAISPSHGGFPSQLRQGWKTVRGRPDR-SSNLRVLAKAAEKGEERESGGGGGENKKSLF 60

Query: 61  SSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEV 120
           SSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEV
Sbjct: 61  SSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEV 120

Query: 121 DGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK 172
           DGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKS SSSGNFFSKLFSK
Sbjct: 121 DGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSKSSSGNFFSKLFSK 176

[Close]

BLAST of IVF0006872 vs. NCBI nr
Match: XP_023532465.1 (uncharacterized protein LOC111794620 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283 bits (723), Expect = 5.60e-95
Identity = 148/176 (84.09%), Postives = 154/176 (87.50%), Query Frame = 0


Query: 1   MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMA---EKGEERESVGG-ENKKSLFS 60
           MVAISPSH GF SQ GQGWK+ R     RSSNLRV A   EKGEE+E  G  +NK+SLFS
Sbjct: 1   MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKATEKGEEKEDAGERKNKQSLFS 60

Query: 61  SVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVD 120
           SVTEALDFS VRSSRDAELLDDARQATKAGGRM+REQYGALRRKIGGTYKDFFKSYIEVD
Sbjct: 61  SVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVD 120

Query: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK 172
           GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLEKSNSSS NFF+K F K
Sbjct: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK 176

[Close]

BLAST of IVF0006872 vs. NCBI nr
Match: XP_022941869.1 (uncharacterized protein LOC111447101 [Cucurbita moschata] >KAG6599950.1 hypothetical protein SDJN03_05183, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030630.1 hypothetical protein SDJN02_04667, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 282 bits (721), Expect = 1.13e-94
Identity = 150/177 (84.75%), Postives = 155/177 (87.57%), Query Frame = 0


Query: 1   MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMA---EKGEERESVGGE--NKKSLF 60
           MVAISPSH GF SQ GQGWK+ R     RSSNLRV A   EKGEE+E  GGE  NK+SLF
Sbjct: 1   MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKED-GGERKNKQSLF 60

Query: 61  SSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEV 120
           SSVTEALDFS VRSSRDAELLDDARQATKAGGRM+REQYGALRRKIGGTYKDFFKSYIEV
Sbjct: 61  SSVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEV 120

Query: 121 DGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK 172
           DGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRY HVACLEKSNSSS NFF+K F K
Sbjct: 121 DGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFFFK 176

[Close]

BLAST of IVF0006872 vs. TAIR 10
Match: AT3G56290.1 (unknown protein; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 199.1 bits (505), Expect = 2.8e-51
Identity = 96/138 (69.57%), Postives = 119/138 (86.23%), Query Frame = 0


Query: 35  VMAEKGEERESVGGENKKSLFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQY 94
           V A++ ++ +    E + SLF+ +T+ALDFS VRS +DAELL +AR+ATK+G +MT+EQY
Sbjct: 38  VSAKQEKDEDKKKNEEETSLFTQLTDALDFSQVRSEKDAELLYEAREATKSGRKMTQEQY 97

Query: 95  GALRRKIGGTYKDFFKSYIEVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVAC 154
           GALRRKIGGTYKDFFKSY+EVDGQYVEEGWVDKTCK+CKKDT+GEARQVDKLGRY HV+C
Sbjct: 98  GALRRKIGGTYKDFFKSYVEVDGQYVEEGWVDKTCKICKKDTKGEARQVDKLGRYAHVSC 157

Query: 155 LEKSNSSSGNFFSKLFSK 173
           L+  N  SGNFF++LFS+
Sbjct: 158 LQ--NPPSGNFFTRLFSR 173

The following BLAST results are available for this feature:

BLAST of IVF0006872 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0006872 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C3X8	1.8e-90	100.00	uncharacterized protein LOC103496731 OS=Cucumis melo OX=3656 GN=LOC103496731 PE=...	[more]
A0A5D3DFR3	1.8e-90	100.00	GATA-N domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A0A0KM41	1.6e-86	95.93	GATA-N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G220390 PE=4...	[more]
A0A6J1FPP4	6.5e-72	84.75	uncharacterized protein LOC111447101 OS=Cucurbita moschata OX=3662 GN=LOC1114471...	[more]
A0A6J1K2I3	4.0e-69	81.92	uncharacterized protein LOC111491808 OS=Cucurbita maxima OX=3661 GN=LOC111491808...	[more]

BLAST of IVF0006872 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456929.1	3.99e-119	100.00	PREDICTED: uncharacterized protein LOC103496731 [Cucumis melo] >XP_016902036.1 P...	[more]
XP_004146444.1	6.10e-114	95.93	uncharacterized protein LOC101211273 [Cucumis sativus] >KGN50725.1 hypothetical ...	[more]
XP_038891315.1	2.16e-108	93.79	uncharacterized protein LOC120080762 [Benincasa hispida]	[more]
XP_023532465.1	5.60e-95	84.09	uncharacterized protein LOC111794620 [Cucurbita pepo subsp. pepo]	[more]
XP_022941869.1	1.13e-94	84.75	uncharacterized protein LOC111447101 [Cucurbita moschata] >KAG6599950.1 hypothet...	[more]

BLAST of IVF0006872 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56290.1	2.8e-51	69.57	unknown protein; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008013	GATA-type transcription activator, N-terminal	PFAM	PF05349	GATA-N	coord: 57..115 e-value: 4.7E-4 score: 20.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	PANTHER	PTHR36771	POTASSIUM TRANSPORTER	coord: 2..172
None	No IPR available	PANTHER	PTHR36771:SF2	POTASSIUM TRANSPORTER	coord: 2..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0006872.1	IVF0006872.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding