IVF0006793 (gene) Melon (IVF77) v1

Overview
NameIVF0006793
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMajor pollen allergen Ole e 6-like
Locationchr07: 21329565 .. 21329849 (-)
RNA-Seq ExpressionIVF0006793
SyntenyIVF0006793
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAAAACCAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTCGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACAGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGGTATCGTCTTGAATCTTTGA

mRNA sequence

ATGGCAAAAACCAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTCGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACAGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGGTATCGTCTTGAATCTTTGA

Coding sequence (CDS)

ATGGCAAAAACCAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTCGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACAGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGGTATCGTCTTGAATCTTTGA

Protein sequence

MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETCEKACIAKDSANTSCHSTCDKDCMKKEVVGIVLNL
Homology
BLAST of IVF0006793 vs. ExPASy TrEMBL
Match: A0A5A7SXV7 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13030G00010 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.9e-42
Identity = 92/94 (97.87%), Postives = 93/94 (98.94%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAKTSTVVFFMCIVVVVGSLQFSRADMTA+RDTEIEMRSKLLQSEISSVMPQFKSCVETC
Sbjct: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60

Query: 61 EKACIAKDSANTSCHSTCDKDCMKKEVVGIVLNL 95
          EKACIAKD ANTSCHSTCDKDCMKKEVVGIVLNL
Sbjct: 61 EKACIAKDGANTSCHSTCDKDCMKKEVVGIVLNL 94

BLAST of IVF0006793 vs. ExPASy TrEMBL
Match: A0A5A7T3F9 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold494G00090 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 5.8e-38
Identity = 84/88 (95.45%), Postives = 87/88 (98.86%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK+ST+VFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEIS+VMPQFKSCVETC
Sbjct: 1  MAKSSTIVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60

Query: 61 EKACIAKDSANTSCHSTCDKDCMKKEVV 89
           KACIAKDSANTSCHSTCDKDCMKKEVV
Sbjct: 61 AKACIAKDSANTSCHSTCDKDCMKKEVV 88

BLAST of IVF0006793 vs. ExPASy TrEMBL
Match: A0A5A7TDR1 (Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002630 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.4e-04
Identity = 36/93 (38.71%), Postives = 51/93 (54.84%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK    VF MCI V+V +LQF+   +  E D   +  +K           ++KSC ETC
Sbjct: 1  MAKKMMAVFLMCI-VLVATLQFA---IAKEEDEVTKYEAKF--------DAKYKSCYETC 60

Query: 61 EKACIAK-DSANTSCHSTCDKDCMKKEVVGIVL 93
          EK C+ K ++  + C   CD+DC +KE  GI+L
Sbjct: 61 EKECLQKGNNGQSFCEVKCDEDCSEKEAAGILL 81

BLAST of IVF0006793 vs. NCBI nr
Match: KAA0035393.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 180 bits (457), Expect = 5.62e-57
Identity = 92/94 (97.87%), Postives = 93/94 (98.94%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAKTSTVVFFMCIVVVVGSLQFSRADMTA+RDTEIEMRSKLLQSEISSVMPQFKSCVETC
Sbjct: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60

Query: 61 EKACIAKDSANTSCHSTCDKDCMKKEVVGIVLNL 94
          EKACIAKD ANTSCHSTCDKDCMKKEVVGIVLNL
Sbjct: 61 EKACIAKDGANTSCHSTCDKDCMKKEVVGIVLNL 94

BLAST of IVF0006793 vs. NCBI nr
Match: KAA0036015.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 167 bits (422), Expect = 1.43e-51
Identity = 84/88 (95.45%), Postives = 87/88 (98.86%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK+ST+VFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEIS+VMPQFKSCVETC
Sbjct: 1  MAKSSTIVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60

Query: 61 EKACIAKDSANTSCHSTCDKDCMKKEVV 88
           KACIAKDSANTSCHSTCDKDCMKKEVV
Sbjct: 61 AKACIAKDSANTSCHSTCDKDCMKKEVV 88

BLAST of IVF0006793 vs. NCBI nr
Match: KAE8637567.1 (hypothetical protein CSA_017844, partial [Cucumis sativus])

HSP 1 Score: 77.4 bits (189), Expect = 5.57e-16
Identity = 41/89 (46.07%), Postives = 55/89 (61.80%), Query Frame = 0

Query: 3   KTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQ-SEISSVMPQFKSCVETCE 62
           K   VVFFMCIVV+ GSLQFS+A  TA    +++   K+   +E   + PQ +SCV TC 
Sbjct: 20  KNIMVVFFMCIVVM-GSLQFSKAQTTANMSPDLQAAEKIKSIAEGMKLWPQMESCVLTCR 79

Query: 63  KACIAKDSANTSCHSTCDKDCMKKEVVGI 90
           K C AK +AN SCH  C+ DC +K +  +
Sbjct: 80  KECDAKGNANASCHQKCNNDCTEKTIASV 107

BLAST of IVF0006793 vs. NCBI nr
Match: KAG6595587.1 (hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 67.4 bits (163), Expect = 3.03e-12
Identity = 40/87 (45.98%), Postives = 50/87 (57.47%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK    V  MC V++V +LQFS AD  AE    +E R K    ++S V  + KSC  TC
Sbjct: 1  MAKKMMAVLLMC-VLLVSALQFSTADSPAE----MEARFKSFFGDLSGVEAKLKSCAATC 60

Query: 61 EKACIAKDSANTSCHSTCDKDCMKKEV 87
          EK C+AK   + SC   C+ DC KKEV
Sbjct: 61 EKECVAKGETSESCKPKCNTDCGKKEV 82

BLAST of IVF0006793 vs. NCBI nr
Match: KAG6595593.1 (hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 67.0 bits (162), Expect = 3.88e-12
Identity = 41/87 (47.13%), Postives = 51/87 (58.62%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK    V  MC V+VV +LQFS    TA++ TE+E + K   S+  +V  +FKSC  TC
Sbjct: 1  MAKKMMAVVLMC-VLVVSALQFS----TADKSTEMEAKFKSFFSDFGTVEAKFKSCAATC 60

Query: 61 EKACIAKDSANTSCHSTCDKDCMKKEV 87
          +K C      N SC S CD DC KKEV
Sbjct: 61 QKKC-----TNASCRSKCDADCGKKEV 77

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SXV73.9e-4297.87Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
A0A5A7T3F95.8e-3895.45Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
A0A5A7TDR12.4e-0438.71Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
Match NameE-valueIdentityDescription
KAA0035393.15.62e-5797.87major pollen allergen Ole e 6-like [Cucumis melo var. makuwa][more]
KAA0036015.11.43e-5195.45major pollen allergen Ole e 6-like [Cucumis melo var. makuwa][more]
KAE8637567.15.57e-1646.07hypothetical protein CSA_017844, partial [Cucumis sativus][more]
KAG6595587.13.03e-1245.98hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6595593.13.88e-1247.13hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036466Pollen allergen ole e 6 superfamilyGENE3D1.10.287.720Pollen allergen ole e 6coord: 51..93
e-value: 2.0E-10
score: 42.0
IPR036466Pollen allergen ole e 6 superfamilySUPERFAMILY111388Pollen allergen ole e 6coord: 52..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0006793.1IVF0006793.1mRNA