IVF0006782 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCGTTGACTTACCCAAGGAAAGGAAGCTATCTCCAACCAGGCCTACCGCGAGACCCGAGAACCCAAGTGTCAAATCTGAACTACCTTCAAAGGAGAAAAGTAGGGCCATAACTTATTCCAATATTCAAGCTCTAATCGGATGTAGCAACATTAGGGAATTCATCGAAAACAATCCTTACCGAAGACTCACCGTGACCCGGAGCGGAGGAAGGAAGGCTTAGGTGGCTTGGTGAAACAAGGAGCTCGGCTCGGCTTGAAGGCGCTCGGCTCGGCTCGGCTCGGCTCCACCTCGGCTCGGCTCGGCTTGGTCTCGGCTCGGCTCGGCTTGTGGCTCGGCTCGGCTTGGCCTCGGCTCGGCTCAACTCGGCTTACTCGGCTTGGTTCTCGGCTTACTCGGCTCGCGGCTCGGCTTGGTTCGGCTGGCGGCTCGGCTCACTCGGCTCGGCTTGCGGCTCACTCGGCTCGGCTTGGACAGCCGGCTTGGAGCCGGGTCGGGTTGGACGAAAGAAAATGGTAG ATGTCCGTTGACTTACCCAAGGAAAGGAAGCTATCTCCAACCAGGCCTACCGCGAGACCCGAGAACCCAAGTGTCAAATCTGAACTACCTTCAAAGGAGAAAAGAGCTCGGCTCGGCTTGAAGGCGCTCGGCTCGGCTCGGCTCGGCTCCACCTCGGCTCGGCTCGGCTTGGTCTCGGCTCGGCTCGGCTTGTGGCTCGGCTCGGCTTGGCCTCGGCTCGGCTCAACTCGGCTTACTCGGCTTGGTTCTCGGCTTACTCGGCTCGCGGCTCGGCTTGGTTCGGCTGGCGGCTCGGCTCACTCGGCTCGGCTTGCGGCTCACTCGGCTCGGCTTGGACAGCCGGCTTGGAGCCGGGTCGGGTTGGACGAAAGAAAATGGTAG ATGTCCGTTGACTTACCCAAGGAAAGGAAGCTATCTCCAACCAGGCCTACCGCGAGACCCGAGAACCCAAGTGTCAAATCTGAACTACCTTCAAAGGAGAAAAGAGCTCGGCTCGGCTTGAAGGCGCTCGGCTCGGCTCGGCTCGGCTCCACCTCGGCTCGGCTCGGCTTGGTCTCGGCTCGGCTCGGCTTGTGGCTCGGCTCGGCTTGGCCTCGGCTCGGCTCAACTCGGCTTACTCGGCTTGGTTCTCGGCTTACTCGGCTCGCGGCTCGGCTTGGTTCGGCTGGCGGCTCGGCTCACTCGGCTCGGCTTGCGGCTCACTCGGCTCGGCTTGGACAGCCGGCTTGGAGCCGGGTCGGGTTGGACGAAAGAAAATGGTAG MSVDLPKERKLSPTRPTARPENPSVKSELPSKEKRARLGLKALGSARLGSTSARLGLVSARLGLWLGSAWPRLGSTRLTRLGSRLTRLAARLGSAGGSAHSARLAAHSARLGQPAWSRVGLDERKW Homology
BLAST of IVF0006782 vs. ExPASy TrEMBL
Match: A0A5A7UMJ9 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold741G00020 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.5e-09 Identity = 71/160 (44.38%), Postives = 81/160 (50.62%), Query Frame = 0
BLAST of IVF0006782 vs. ExPASy TrEMBL
Match: A0A5A7UGC7 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G001680 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 4.9e-08 Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0
BLAST of IVF0006782 vs. ExPASy TrEMBL
Match: A0A5A7VLK0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G00770 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 5.4e-07 Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 0
BLAST of IVF0006782 vs. ExPASy TrEMBL
Match: A0A5A7SP62 (CCR4-NOT transcription complex subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G003120 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 2.1e-06 Identity = 51/89 (57.30%), Postives = 54/89 (60.67%), Query Frame = 0
BLAST of IVF0006782 vs. NCBI nr
Match: KAA0057143.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa]) HSP 1 Score: 73.9 bits (180), Expect = 1.46e-12 Identity = 72/163 (44.17%), Postives = 84/163 (51.53%), Query Frame = 0
BLAST of IVF0006782 vs. NCBI nr
Match: KAA0054224.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa]) HSP 1 Score: 67.4 bits (163), Expect = 6.19e-11 Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0
BLAST of IVF0006782 vs. NCBI nr
Match: KAA0068117.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 64.3 bits (155), Expect = 5.43e-09 Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 0
BLAST of IVF0006782 vs. NCBI nr
Match: KAA0025991.1 (CCR4-NOT transcription complex subunit 1 [Cucumis melo var. makuwa]) HSP 1 Score: 58.2 bits (139), Expect = 3.14e-07 Identity = 52/92 (56.52%), Postives = 58/92 (63.04%), Query Frame = 0
BLAST of IVF0006782 vs. NCBI nr
Match: KAA0032698.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa]) HSP 1 Score: 51.2 bits (121), Expect = 1.14e-04 Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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