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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAAATGGGGTTTGTTGAAAAACGAGAAATCAGAGACGAACAAGTAACAAAAACCGAAGAAAAGGGAAAAAGTCGGGAAGAAGAAGGAGATGAGGATGAAAGAACAGAAAAAGGAAGTGAAATAAGAAAATATTATATAGAAAGAAGAAGAGAGGAGAAAGAAAGGAAAACCGGGGGCCATTTGGAACAGGAGGAATTGCTTGAGTAG mRNA sequence ATGGAAATGGGGTTTGTTGAAAAACGAGAAATCAGAGACGAACAAGTAACAAAAACCGAAGAAAAGGGAAAAAGTCGGGAAGAAGAAGGAGATGAGGATGAAAGAACAGAAAAAGGAAGTGAAATAAGAAAATATTATATAGAAAGAAGAAGAGAGGAGAAAGAAAGGAAAACCGGGGGCCATTTGGAACAGGAGGAATTGCTTGAGTAG Coding sequence (CDS) ATGGAAATGGGGTTTGTTGAAAAACGAGAAATCAGAGACGAACAAGTAACAAAAACCGAAGAAAAGGGAAAAAGTCGGGAAGAAGAAGGAGATGAGGATGAAAGAACAGAAAAAGGAAGTGAAATAAGAAAATATTATATAGAAAGAAGAAGAGAGGAGAAAGAAAGGAAAACCGGGGGCCATTTGGAACAGGAGGAATTGCTTGAGTAG Protein sequence MEMGFVEKREIRDEQVTKTEEKGKSREEEGDEDERTEKGSEIRKYYIERRREEKERKTGGHLEQEELLE
Homology
BLAST of IVF0006777 vs. ExPASy TrEMBL
Match: A0A0A0KYK2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G188420 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 2.2e-18 Identity = 62/70 (88.57%), Postives = 64/70 (91.43%), Query Frame = 0
Query: 1 MEMGFVEKREIRDEQVTKTEEKGKSR-EEEGDEDERTEKGSEIRKYYIERRREEKERKTG 60
MEMGFVEK EIRDEQVT+TEEK S+ EEEGDEDERTEKGS IRKYYIERR EEKERKTG
Sbjct: 1 MEMGFVEKGEIRDEQVTRTEEKVTSQEEEEGDEDERTEKGSGIRKYYIERRGEEKERKTG 60
Query: 61 GHLEQEELLE 70
GHLEQEELLE
Sbjct: 61 GHLEQEELLE 70
BLAST of IVF0006777 vs. NCBI nr
Match: KGN53914.1 (hypothetical protein Csa_019171 [Cucumis sativus]) HSP 1 Score: 99.4 bits (246), Expect = 1.54e-25 Identity = 62/70 (88.57%), Postives = 64/70 (91.43%), Query Frame = 0
Query: 1 MEMGFVEKREIRDEQVTKTEEKGKSREEE-GDEDERTEKGSEIRKYYIERRREEKERKTG 60
MEMGFVEK EIRDEQVT+TEEK S+EEE GDEDERTEKGS IRKYYIERR EEKERKTG
Sbjct: 1 MEMGFVEKGEIRDEQVTRTEEKVTSQEEEEGDEDERTEKGSGIRKYYIERRGEEKERKTG 60
Query: 61 GHLEQEELLE 69
GHLEQEELLE
Sbjct: 61 GHLEQEELLE 70
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KYK2 | 2.2e-18 | 88.57 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G188420 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN53914.1 | 1.54e-25 | 88.57 | hypothetical protein Csa_019171 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..69 |
Relationships
The following mRNA feature(s) are a part of this gene:
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