IVF0006750 (gene) Melon (IVF77) v1

Overview


Name	IVF0006750
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	charged multivesicular body protein 5
Location	chr06: 6616045 .. 6619310 (-)
RNA-Seq Expression	IVF0006750
Synteny	IVF0006750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCCAAAAAAACTGATAATAAATAAGTTTAATATTTCTTTTTTTTTTTTTTTTGGTAGAAAAAGGTTTTATGAGGGAGAACCTCTGAGAACAATAATAAATTATTGCTATAGTTCACAATGAAAGCAAAAGATGTGTCTCCAACTATATTTATGTGTTCTTCCATTTATTTTGACATCTTTTTTAAAAACATATATTTATCATTCTCTCCTTCTACTTCATTTTTTTATTTAACCAAGTCAATATAAATATACTCTATTTTGTAAGTCAAATATAAACAATGTGTATCTGGCCAACTCTTTATTTTTTATTTATACTCTTTTTTTTTTCTTATTTCTTTACTTTTATAAAAATATCATTTTCAAATTTGAAAAATTGTCTTAAGTGATACACTTTATTTAATTTTAATCTTTATGATTGTGTTAAATGTGTTACAAGAATTACTTTCGATATAAAAGAATATAAGTTATCTTAATCGAATTATTTAAGAGCTATTTGAAGTGAGAGTTGTAAGAGTTGTTTCTATTAGAGTCCAAAGTATAACAAATTAATAATTAAAAATAGAATTCATATTATTAATAAGTGGTGGGTCTACAATGAATCGAACTTTTTGGGATGACTCTCTCCATCCAATCAAGCTCTTCCCTCTAGCCCCAAACACCCACATATGTTCATATGCAATAAAGATCAAAAGCAATGAGTTGGTGTCTCAAAAATAGTACTAGTCAAGTAATTAACAAAATTGTCAAAGATTTAACTACCAAATCAAAACTTTTAAAATTACAAATTAGTAAAAATGTAGAAAATTACAACAATTTCATCATCAAATTGAAGGATTCAAATAAAAGCTAAAAAACGCACCTAGCACACTTTACTACTATATGCTCCACCCATCTTCCAAAATAACTCATCTGTGACATTATCTCGACTTCTTGCACAAAAATGAACTATCCTCTTTGTCACCTCCACCTTGTTCTTACACACCTTCATCAATCTCTCGAATTCTGCCCTCGACAATCGAAATTTGACATGCACAAGCTTAGCAACACCATCGTTGGTTGATGACCCATGAGGATCGAATCGAAGAGTTTGGAGGTTGGATATTGAACGACGAGAGAGCAAAAAAAAGGCAGTCGAGGCGGTTAAAGGCAGACAAATTATGAAGGTCCGGACAAGCGTGACGAAGCGAACAATGGTCGTCGGGGAGGGTTGGCAATTGGAGGAGGAAGTAAAAGCACTACAACAAATCTGGCCTTTAATGTCGGGTGGAAAAAATGAAAAATGGGCTTTAATGTCGGTTTTCAAAAGGCGGACGTTTAATGTCGGTTTTAAACCGACATTAAAGAAGGAGCTTTAATGCCGGTTTAAAACCGACATTAAACGACCACCTTTTGAAAACCGACATTAAAGCCCCTTTGTAATTTTTTATTTTTTTTAATTTGGTAAAAAATCAAGTTTTCTCTCTCTTTTTACCTTTTTTTTTCTTAAAAGTTTCTATATAAATTCTCCTCCTCTCTTCTTCCTCCTTTGAAATCTTCTAATCCTAATCAAAATTTCTTGCTTTCATTTCCTATCATCGTAGATTCTTTTTTCCATCAACGATTTGAAGATTTACTATGGCCGGTAAAGGAGAAGGTCCGGAATCGATCTTGGAACCACGTACTCTTGCGTCGGTGTGTGGCAGCATGATCGAGTTGAGATCATTGCCAACGATCAGGGCAACAGGACGCCGTCGTCGTATGTTGCTTTCGCCGATTAACACCGTTTTTGGTAAATTTTATTTTTCTTTTCTTTTGTTTTTTTTAATTTTATTTATTTATTTATTTATTTATTTTTTTGCACTTTGAGTTCTGGTTCTATGGAGTTTTTTTTGTTGCTTAAGAAATGAATTTAGGTTGTTCGAGTTTGGAGAAGGTATGAACATTTGAAGAAAAGGAAGAATGTTTCAATTTCATGTAATCAATCTCGTAGGAAGATGAGAATGTACGATTTGTTTACAGTCAAAACAGAACTTGAAGAAGAAGAAGAAGAAGATGAAGATGAAGGTATGAAATTTCTTTTTCCCTTTTATTGTTTTGGAGTAGATAGTTTATTTATATGCATTTGTGGACCAAGTAATTTTTTAGAGCTTCTTTTAAAAGGGATTGTTTTGAAAAATATCAGCAAAATGGTGAACTTCTTGTTTTTATTGTTTCAATTGTTTTTAACTTATAGAAGTGAAATATTTTATTTGTGATTAAAAGCCATCAAAAAGCATTAGTCAATAGCCAAGACCACTCTCAGCGGCGGACTCCAACACAAGCCCTTGGAAAATCTCTGGAAACTCCATTTTCATTCCTAATAATCCTAACAAGTTTGAATTTGGCAAGTTTCCATTCATTTCTCTTCTTTACCCTTCTCTATTTCTCCCCCAATTTTCCCCTGAATTTGATATCCTGGTTCTTCCTAATATCAGCTTAGCTCGGATTGTGGATTGACATCCTGGTTTTATTTATTTATTTAATCAAATAGGAGAGTCACTTTATCTGTCAAACTAACGTTGGTTTTGTATTTTCCAGATGTCGGCCTTGAAATCTGCCAATAAGGAGTTGAAAGGAATGATGAAAACAGTCAGTATACAAGACATAGATGTCAGTAACAATCAATTCTTTTTAGCATCCCTAGTTTTATTTTGGCATTTGTTGAGAGATTTGTGTTGCCTACAGAACTTACAAGATGAGATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTACAATGTACCTGATGACATTGATGAGGATGAACTTTTGGGTGGTAAGATTACTGCATTTTAGCTCAGTGTCGATGAAATATATGGTACCTTAGTAATCTTACATTGTGCCTACGTTTTGGATTATAGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCTGATAAGGAATCTGATTTTGAAGGAGAGCTCAACTTGCCTGCCGCTCCGATAGGGCATGCAGCAGTTCCTGCTGGTAGAAACAATGCACAGGTAATGATCGTTGAAAAAAAATTGTATGGACTTGTTGGTTGAAATAGGAAACTTAAGAGATAAGTAACGGGATACCACAATGATATGAAACTTACAACTTACAAAAGAAGGGGAATTGCTAAAGAATCTTAAAAGATAGAGCAGGTTGTGTACCAGTATATGCATGTCCTACAGTTGATCATTGGATTGTATCAGAATAA

mRNA sequence

ATGTTTCCAAAAAAACTGATAATAAATAAGTTTAATATTTCTTTTTTTTTTTTTTTTGGTAGAAAAAGGTTTTATGAGGGAGAACCTCTGAGAACAATAATAAATTATTGCTATAGATCGAATCGAAGAGTTTGGAGGTTGGATATTGAACGACGAGAGAGCAAAAAAAAGGCAGTCGAGGCGGTTAAAGGCAGACAAATTATGAAGGTCCGGACAAGCGTGACGAAGCGAACAATGGTCGTCGGGGAGGGTTGGCAATTGGAGGAGGAAGTAAAAGCACTACAACAAATCTGGCCTTTAATGTCGGGTGGAAAAAATGAAAAATGGGCTTTAATGTCGATGTCGGCCTTGAAATCTGCCAATAAGGAGTTGAAAGGAATGATGAAAACAGTCAGTATACAAGACATAGATAACTTACAAGATGAGATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTACAATGTACCTGATGACATTGATGAGGATGAACTTTTGGGTGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCTGATAAGGAATCTGATTTTGAAGGAGAGCTCAACTTGCCTGCCGCTCCGATAGGGCATGCAGCAGTTCCTGCTGTATATGCATGTCCTACAGTTGATCATTGGATTGTATCAGAATAA

Coding sequence (CDS)

ATGTTTCCAAAAAAACTGATAATAAATAAGTTTAATATTTCTTTTTTTTTTTTTTTTGGTAGAAAAAGGTTTTATGAGGGAGAACCTCTGAGAACAATAATAAATTATTGCTATAGATCGAATCGAAGAGTTTGGAGGTTGGATATTGAACGACGAGAGAGCAAAAAAAAGGCAGTCGAGGCGGTTAAAGGCAGACAAATTATGAAGGTCCGGACAAGCGTGACGAAGCGAACAATGGTCGTCGGGGAGGGTTGGCAATTGGAGGAGGAAGTAAAAGCACTACAACAAATCTGGCCTTTAATGTCGGGTGGAAAAAATGAAAAATGGGCTTTAATGTCGATGTCGGCCTTGAAATCTGCCAATAAGGAGTTGAAAGGAATGATGAAAACAGTCAGTATACAAGACATAGATAACTTACAAGATGAGATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTACAATGTACCTGATGACATTGATGAGGATGAACTTTTGGGTGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCTGATAAGGAATCTGATTTTGAAGGAGAGCTCAACTTGCCTGCCGCTCCGATAGGGCATGCAGCAGTTCCTGCTGTATATGCATGTCCTACAGTTGATCATTGGATTGTATCAGAATAA

Protein sequence

MFPKKLIINKFNISFFFFFGRKRFYEGEPLRTIINYCYRSNRRVWRLDIERRESKKKAVEAVKGRQIMKVRTSVTKRTMVVGEGWQLEEEVKALQQIWPLMSGGKNEKWALMSMSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAVYACPTVDHWIVSE

Homology

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BLAST of IVF0006750 vs. ExPASy Swiss-Prot
Match: Q9FMC5 (Vacuolar protein sorting-associated protein 60.2 OS=Arabidopsis thaliana OX=3702 GN=VPS60-2 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 8.2e-46
Identity = 120/218 (55.05%), Postives = 142/218 (65.14%), Query Frame = 0


Query: 19  FGRKRFYEGEPLRTIINYCYRSNRR-------VWRLDIE--------RRESKKKAVEAVK 78
           FG K     EP  +I +   R N+R       V RLD E        +R     A+EA+K
Sbjct: 5   FGAKN--NKEPPPSIQDASDRINKRGDSVEEKVKRLDAELCKYKDQIKRTRPGPALEAIK 64

Query: 79  GRQIMKVRTSVTKRTMVVGEGWQLEEEVKALQQIWPLMSGGKNEKWALMSMSALKSANKE 138
            R +  ++    ++ M  G+   L  +   L Q+     G K+   A  +M+ALKSANKE
Sbjct: 65  ARAMRVLK----QKKMYEGQRDMLYNQTFNLDQVSFAAEGLKD---AQQTMTALKSANKE 124

Query: 139 LKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADM 198
           LKGMMKTV IQDIDNLQD+MMDLMD S+EIQETLGRSYNVPDDIDED+LLGELDALEADM
Sbjct: 125 LKGMMKTVKIQDIDNLQDDMMDLMDESSEIQETLGRSYNVPDDIDEDDLLGELDALEADM 184

Query: 199 GFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVP 222
           G ETEADGVPSYLQPDKE D   ELNLP+AP+GH   P
Sbjct: 185 GNETEADGVPSYLQPDKEPDLNDELNLPSAPMGHTGAP 213

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BLAST of IVF0006750 vs. ExPASy Swiss-Prot
Match: Q9LPN5 (Vacuolar protein sorting-associated protein 60.1 OS=Arabidopsis thaliana OX=3702 GN=VPS60-1 PE=1 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.9e-45
Identity = 117/218 (53.67%), Postives = 146/218 (66.97%), Query Frame = 0


Query: 19  FGRKRFYEGEPLRTIINYCYRSNRR-------VWRLDIE---RRESKKK-----AVEAVK 78
           FG K+    EP  +I +   R N+R       + +LD+E    +E  KK     A EAVK
Sbjct: 5   FGAKK--NTEPPPSIQDASDRINKRGDSVEDKIKKLDVELCKYKEQLKKTRPGPAQEAVK 64

Query: 79  GRQIMKVRTSVTKRTMVVGEGWQLEEEVKALQQIWPLMSGGKNEKWALMSMSALKSANKE 138
            R +  ++    ++ M  G+   L  +   L Q+     G K+   A  +M+ALKSANKE
Sbjct: 65  ARAMRVLK----QKKMYEGQRDMLYNQTFNLDQVSFAAEGLKD---AQQTMTALKSANKE 124

Query: 139 LKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADM 198
           LKGMMKTV IQDIDNLQDEMMDLMDVS+EIQE+LGRSYN+PD +DED+L+GELDALEADM
Sbjct: 125 LKGMMKTVKIQDIDNLQDEMMDLMDVSSEIQESLGRSYNIPDGLDEDDLMGELDALEADM 184

Query: 199 GFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVP 222
           G ETEADG+PSYLQPD E+D++ ELNLPAAP GH   P
Sbjct: 185 GNETEADGMPSYLQPDTETDYDSELNLPAAPTGHNGAP 213

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BLAST of IVF0006750 vs. ExPASy Swiss-Prot
Match: Q54JK4 (Charged multivesicular body protein 5 OS=Dictyostelium discoideum OX=44689 GN=chmp5 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 9.1e-13
Identity = 41/87 (47.13%), Postives = 60/87 (68.97%), Query Frame = 0


Query: 111 LMSMSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDED 170
           + ++SA+K   K++K  +K + I+D+D++QDEM DL+D +NEIQE+LGR+Y  PD +DE 
Sbjct: 102 ITTVSAMKQGAKDMKTQLKHIKIEDVDDMQDEMQDLLDYNNEIQESLGRAYQTPDTLDES 161

Query: 171 ELLGELDALEADMGFETEAD-GVPSYL 197
           EL  EL      MG E E +  +PSYL
Sbjct: 162 ELEAEL----MSMGEELELEASMPSYL 184

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BLAST of IVF0006750 vs. ExPASy Swiss-Prot
Match: Q6DD52 (Charged multivesicular body protein 5 OS=Xenopus laevis OX=8355 GN=chmp5 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.0e-09
Identity = 44/114 (38.60%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 113 SMSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDEL 172
           ++ A+K   KE+K   K V I  I++LQD++ D+M+ +NEIQE L RSY  P +IDED+L
Sbjct: 105 TVDAMKVGAKEMKKAYKQVKIDQIEDLQDQLEDMMENANEIQEALSRSYGTP-EIDEDDL 164

Query: 173 LGELDA------LEADMGFETEADGVPSYLQ--PDKESDFEG----ELNLPAAP 215
             ELDA      L+ D  +  EA   P+  +  P+   + +G    E  LP  P
Sbjct: 165 EAELDALGDELLLDDDTSYLDEAASAPAIPEGVPNDSKNKDGVLVDEFGLPQIP 217

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BLAST of IVF0006750 vs. ExPASy Swiss-Prot
Match: Q9D7S9 (Charged multivesicular body protein 5 OS=Mus musculus OX=10090 GN=Chmp5 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.0e-08
Identity = 60/195 (30.77%), Postives = 95/195 (48.72%), Query Frame = 0


Query: 18  FFGRKRFYEGEP-----LRTIINYCYRSNRRVWRLDIE----------RRESKKKAVEAV 77
           FFG+ +     P     + T+ +     ++++ RLD E           RE   K +   
Sbjct: 4   FFGKAKPKAPPPSLTDCIGTVDSRAESIDKKISRLDAELVKYKDQIKKMREGPAKNMVKQ 63

Query: 78  KGRQIMK-VRTSVTKRTMVVGEGWQLEEEVKALQQIWPLMSGGKNEKWALMSMSALKSAN 137
           K  +++K  R    +R  +  + + +E+    +Q +          K    ++ A+K   
Sbjct: 64  KALRVLKQKRMYEQQRDNLAQQSFNMEQANYTIQSL----------KDTKTTVDAMKLGV 123

Query: 138 KELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEA 197
           KE+K   K V I  I++LQD++ D+M+ +NEIQE LGRSY  P ++DED+L  ELDAL  
Sbjct: 124 KEMKKAYKEVKIDQIEDLQDQLEDMMEDANEIQEALGRSYGTP-ELDEDDLEAELDAL-- 183

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BLAST of IVF0006750 vs. ExPASy TrEMBL
Match: A0A5D3CBJ0 (Charged multivesicular body protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001830 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.0e-51
Identity = 135/219 (61.64%), Postives = 155/219 (70.78%), Query Frame = 0


Query: 19  FGRKRFYEGEPLRTIINYCYRSNRR-------VWRLDIERRESKKK--------AVEAVK 78
           FG K+  + EP  +I +   R N+R       + +LD+E    K++        A EAVK
Sbjct: 5   FGVKK--DKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEAVK 64

Query: 79  GRQIMKVRTSVTKRTMVVGEGWQLEEEVKALQQIWPLMSGGKNEKWALMSMSALKSANKE 138
            R +  ++    ++ M  G+   L  +   L Q+     G K+   A  +MSALKSANKE
Sbjct: 65  ARAMRVLK----QKRMYEGQRDMLYNQTFNLDQVAFASEGIKD---AQQTMSALKSANKE 124

Query: 139 LKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADM 198
           LKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADM
Sbjct: 125 LKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADM 184

Query: 199 GFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPA 223
           GFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPA
Sbjct: 185 GFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPA 214

[Close]

BLAST of IVF0006750 vs. ExPASy TrEMBL
Match: A0A0A0KWL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G613490 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.0e-51
Identity = 135/219 (61.64%), Postives = 155/219 (70.78%), Query Frame = 0


Query: 19  FGRKRFYEGEPLRTIINYCYRSNRR-------VWRLDIERRESKKK--------AVEAVK 78
           FG K+  + EP  +I +   R N+R       + +LD+E    K++        A EAVK
Sbjct: 5   FGVKK--DKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEAVK 64

Query: 79  GRQIMKVRTSVTKRTMVVGEGWQLEEEVKALQQIWPLMSGGKNEKWALMSMSALKSANKE 138
            R +  ++    ++ M  G+   L  +   L Q+     G K+   A  +MSALKSANKE
Sbjct: 65  ARAMRVLK----QKRMYEGQRDMLYNQTFNLDQVAFASEGIKD---AQQTMSALKSANKE 124

Query: 139 LKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADM 198
           LKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADM
Sbjct: 125 LKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADM 184

Query: 199 GFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPA 223
           GFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPA
Sbjct: 185 GFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPA 214

[Close]

BLAST of IVF0006750 vs. ExPASy TrEMBL
Match: A0A1S3BFT5 (charged multivesicular body protein 5 OS=Cucumis melo OX=3656 GN=LOC103489370 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.0e-51
Identity = 135/219 (61.64%), Postives = 155/219 (70.78%), Query Frame = 0


Query: 19  FGRKRFYEGEPLRTIINYCYRSNRR-------VWRLDIERRESKKK--------AVEAVK 78
           FG K+  + EP  +I +   R N+R       + +LD+E    K++        A EAVK
Sbjct: 5   FGVKK--DKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEAVK 64

Query: 79  GRQIMKVRTSVTKRTMVVGEGWQLEEEVKALQQIWPLMSGGKNEKWALMSMSALKSANKE 138
            R +  ++    ++ M  G+   L  +   L Q+     G K+   A  +MSALKSANKE
Sbjct: 65  ARAMRVLK----QKRMYEGQRDMLYNQTFNLDQVAFASEGIKD---AQQTMSALKSANKE 124

Query: 139 LKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADM 198
           LKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADM
Sbjct: 125 LKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADM 184

Query: 199 GFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPA 223
           GFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPA
Sbjct: 185 GFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPA 214

[Close]

BLAST of IVF0006750 vs. ExPASy TrEMBL
Match: A0A5A7UDQ8 (Charged multivesicular body protein 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G002610 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.9e-50
Identity = 110/119 (92.44%), Postives = 113/119 (94.96%), Query Frame = 0


Query: 104 GKNEKWALMSMSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNV 163
           G + +  L  MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNV
Sbjct: 11  GIDLRTTLEKMSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNV 70

Query: 164 PDDIDEDELLGELDALEADMGFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPA 223
           PDDIDEDELLGELDALEADMGFETEADGVPSYLQPDKES+FEGELNLPAAPIGHAAVPA
Sbjct: 71  PDDIDEDELLGELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPA 129

[Close]

BLAST of IVF0006750 vs. ExPASy TrEMBL
Match: A0A5D3DCL2 (Charged multivesicular body protein 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold609G00600 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 2.5e-50
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 114 MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 173
           MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60

Query: 174 GELDALEADMGFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPA 223
           GELDALEADMGFETEADGVPSYLQPDKES+FEGELNLPAAPIGHAAVPA
Sbjct: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPA 109

[Close]

BLAST of IVF0006750 vs. NCBI nr
Match: XP_008446740.1 (PREDICTED: charged multivesicular body protein 5 [Cucumis melo] >TYK09191.1 charged multivesicular body protein 5 [Cucumis melo var. makuwa])

HSP 1 Score: 212 bits (540), Expect = 3.14e-65
Identity = 135/219 (61.64%), Postives = 155/219 (70.78%), Query Frame = 0


Query: 19  FGRKRFYEGEPLRTIINYCYRSNRR-------VWRLDIERRESKKK--------AVEAVK 78
           FG K+  + EP  +I +   R N+R       + +LD+E    K++        A EAVK
Sbjct: 5   FGVKK--DKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEAVK 64

Query: 79  GRQIMKVRTSVTKRTMVVGEGWQLEEEVKALQQIWPLMSGGKNEKWALMSMSALKSANKE 138
            R +  ++    ++ M  G+   L  +   L Q+     G K+   A  +MSALKSANKE
Sbjct: 65  ARAMRVLK----QKRMYEGQRDMLYNQTFNLDQVAFASEGIKD---AQQTMSALKSANKE 124

Query: 139 LKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADM 198
           LKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADM
Sbjct: 125 LKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADM 184

Query: 199 GFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPA 222
           GFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPA
Sbjct: 185 GFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPA 214

[Close]

BLAST of IVF0006750 vs. NCBI nr
Match: XP_004135046.1 (vacuolar protein sorting-associated protein 60.1 [Cucumis sativus] >XP_031741404.1 vacuolar protein sorting-associated protein 60.1 [Cucumis sativus])

HSP 1 Score: 212 bits (540), Expect = 3.14e-65
Identity = 135/219 (61.64%), Postives = 155/219 (70.78%), Query Frame = 0


Query: 19  FGRKRFYEGEPLRTIINYCYRSNRR-------VWRLDIERRESKKK--------AVEAVK 78
           FG K+  + EP  +I +   R N+R       + +LD+E    K++        A EAVK
Sbjct: 5   FGVKK--DKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEAVK 64

Query: 79  GRQIMKVRTSVTKRTMVVGEGWQLEEEVKALQQIWPLMSGGKNEKWALMSMSALKSANKE 138
            R +  ++    ++ M  G+   L  +   L Q+     G K+   A  +MSALKSANKE
Sbjct: 65  ARAMRVLK----QKRMYEGQRDMLYNQTFNLDQVAFASEGIKD---AQQTMSALKSANKE 124

Query: 139 LKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADM 198
           LKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADM
Sbjct: 125 LKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADM 184

Query: 199 GFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPA 222
           GFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPA
Sbjct: 185 GFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPA 214

[Close]

BLAST of IVF0006750 vs. NCBI nr
Match: XP_008463129.1 (PREDICTED: charged multivesicular body protein 5-like [Cucumis melo])

HSP 1 Score: 208 bits (529), Expect = 4.85e-65
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 114 MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 173
           MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60

Query: 174 GELDALEADMGFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPA 222
           GELDALEADMGFETEADGVPSYLQPDKES+FEGELNLPAAPIGHAAVPA
Sbjct: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPA 109

[Close]

BLAST of IVF0006750 vs. NCBI nr
Match: TYK21411.1 (charged multivesicular body protein 5-like [Cucumis melo var. makuwa])

HSP 1 Score: 208 bits (529), Expect = 2.12e-64
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 114 MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 173
           MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60

Query: 174 GELDALEADMGFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPA 222
           GELDALEADMGFETEADGVPSYLQPDKES+FEGELNLPAAPIGHAAVPA
Sbjct: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPA 109

[Close]

BLAST of IVF0006750 vs. NCBI nr
Match: KAA0051835.1 (charged multivesicular body protein 5-like [Cucumis melo var. makuwa])

HSP 1 Score: 208 bits (530), Expect = 2.86e-64
Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 0


Query: 111 LMSMSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDED 170
           L  MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDED
Sbjct: 18  LEKMSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDED 77

Query: 171 ELLGELDALEADMGFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPA 222
           ELLGELDALEADMGFETEADGVPSYLQPDKES+FEGELNLPAAPIGHAAVPA
Sbjct: 78  ELLGELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPA 129

[Close]

BLAST of IVF0006750 vs. TAIR 10
Match: AT5G04850.1 (SNF7 family protein )

HSP 1 Score: 185.3 bits (469), Expect = 5.8e-47
Identity = 120/218 (55.05%), Postives = 142/218 (65.14%), Query Frame = 0


Query: 19  FGRKRFYEGEPLRTIINYCYRSNRR-------VWRLDIE--------RRESKKKAVEAVK 78
           FG K     EP  +I +   R N+R       V RLD E        +R     A+EA+K
Sbjct: 5   FGAKN--NKEPPPSIQDASDRINKRGDSVEEKVKRLDAELCKYKDQIKRTRPGPALEAIK 64

Query: 79  GRQIMKVRTSVTKRTMVVGEGWQLEEEVKALQQIWPLMSGGKNEKWALMSMSALKSANKE 138
            R +  ++    ++ M  G+   L  +   L Q+     G K+   A  +M+ALKSANKE
Sbjct: 65  ARAMRVLK----QKKMYEGQRDMLYNQTFNLDQVSFAAEGLKD---AQQTMTALKSANKE 124

Query: 139 LKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADM 198
           LKGMMKTV IQDIDNLQD+MMDLMD S+EIQETLGRSYNVPDDIDED+LLGELDALEADM
Sbjct: 125 LKGMMKTVKIQDIDNLQDDMMDLMDESSEIQETLGRSYNVPDDIDEDDLLGELDALEADM 184

Query: 199 GFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVP 222
           G ETEADGVPSYLQPDKE D   ELNLP+AP+GH   P
Sbjct: 185 GNETEADGVPSYLQPDKEPDLNDELNLPSAPMGHTGAP 213

[Close]

BLAST of IVF0006750 vs. TAIR 10
Match: AT3G10640.1 (SNF7 family protein )

HSP 1 Score: 182.2 bits (461), Expect = 4.9e-46
Identity = 117/218 (53.67%), Postives = 146/218 (66.97%), Query Frame = 0


Query: 19  FGRKRFYEGEPLRTIINYCYRSNRR-------VWRLDIE---RRESKKK-----AVEAVK 78
           FG K+    EP  +I +   R N+R       + +LD+E    +E  KK     A EAVK
Sbjct: 5   FGAKK--NTEPPPSIQDASDRINKRGDSVEDKIKKLDVELCKYKEQLKKTRPGPAQEAVK 64

Query: 79  GRQIMKVRTSVTKRTMVVGEGWQLEEEVKALQQIWPLMSGGKNEKWALMSMSALKSANKE 138
            R +  ++    ++ M  G+   L  +   L Q+     G K+   A  +M+ALKSANKE
Sbjct: 65  ARAMRVLK----QKKMYEGQRDMLYNQTFNLDQVSFAAEGLKD---AQQTMTALKSANKE 124

Query: 139 LKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADM 198
           LKGMMKTV IQDIDNLQDEMMDLMDVS+EIQE+LGRSYN+PD +DED+L+GELDALEADM
Sbjct: 125 LKGMMKTVKIQDIDNLQDEMMDLMDVSSEIQESLGRSYNIPDGLDEDDLMGELDALEADM 184

Query: 199 GFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVP 222
           G ETEADG+PSYLQPD E+D++ ELNLPAAP GH   P
Sbjct: 185 GNETEADGMPSYLQPDTETDYDSELNLPAAPTGHNGAP 213

[Close]

BLAST of IVF0006750 vs. TAIR 10
Match: AT3G10640.2 (SNF7 family protein )

HSP 1 Score: 177.6 bits (449), Expect = 1.2e-44
Identity = 96/146 (65.75%), Postives = 114/146 (78.08%), Query Frame = 0


Query: 76  KRTMVVGEGWQLEEEVKALQQIWPLMSGGKNEKWALMSMSALKSANKELKGMMKTVSIQD 135
           ++ M  G+   L  +   L Q+     G K+   A  +M+ALKSANKELKGMMKTV IQD
Sbjct: 6   QKKMYEGQRDMLYNQTFNLDQVSFAAEGLKD---AQQTMTALKSANKELKGMMKTVKIQD 65

Query: 136 IDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSY 195
           IDNLQDEMMDLMDVS+EIQE+LGRSYN+PD +DED+L+GELDALEADMG ETEADG+PSY
Sbjct: 66  IDNLQDEMMDLMDVSSEIQESLGRSYNIPDGLDEDDLMGELDALEADMGNETEADGMPSY 125

Query: 196 LQPDKESDFEGELNLPAAPIGHAAVP 222
           LQPD E+D++ ELNLPAAP GH   P
Sbjct: 126 LQPDTETDYDSELNLPAAPTGHNGAP 148

[Close]

BLAST of IVF0006750 vs. TAIR 10
Match: AT5G04850.2 (SNF7 family protein )

HSP 1 Score: 166.8 bits (421), Expect = 2.1e-41
Identity = 120/255 (47.06%), Postives = 142/255 (55.69%), Query Frame = 0


Query: 19  FGRKRFYEGEPLRTIINYCYRSNRR-------VWRLDIE--------RRESKKKAVEAVK 78
           FG K     EP  +I +   R N+R       V RLD E        +R     A+EA+K
Sbjct: 5   FGAKN--NKEPPPSIQDASDRINKRGDSVEEKVKRLDAELCKYKDQIKRTRPGPALEAIK 64

Query: 79  GRQIMKVRTSVTKRTMVVGEGWQLEEEVKALQQIWPLMSGGKNEKWALMSMSALKSANKE 138
            R +  ++    ++ M  G+   L  +   L Q+     G K+   A  +M+ALKSANKE
Sbjct: 65  ARAMRVLK----QKKMYEGQRDMLYNQTFNLDQVSFAAEGLKD---AQQTMTALKSANKE 124

Query: 139 LKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLG--------- 198
           LKGMMKTV IQDIDNLQD+MMDLMD S+EIQETLGRSYNVPDDIDED+LLG         
Sbjct: 125 LKGMMKTVKIQDIDNLQDDMMDLMDESSEIQETLGRSYNVPDDIDEDDLLGGKFFLCSLC 184

Query: 199 ----------------------------ELDALEADMGFETEADGVPSYLQPDKESDFEG 222
                                       ELDALEADMG ETEADGVPSYLQPDKE D   
Sbjct: 185 CLSLGLVETISLCLLNSAPYTLYRFVNSELDALEADMGNETEADGVPSYLQPDKEPDLND 244

[Close]

BLAST of IVF0006750 vs. TAIR 10
Match: AT2G19830.1 (SNF7 family protein )

HSP 1 Score: 42.4 bits (98), Expect = 6.1e-04
Identity = 25/68 (36.76%), Postives = 38/68 (55.88%), Query Frame = 0


Query: 113 SMSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDEL 172
           ++ AL++    +K M K  +I D+D   DE+ +  +   +IQE L   +   +D DEDEL
Sbjct: 100 TVDALRTGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSAPFGA-NDFDEDEL 159

Query: 173 LGELDALE 181
             ELD LE
Sbjct: 160 EAELDELE 166

The following BLAST results are available for this feature:

BLAST of IVF0006750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMC5	8.2e-46	55.05	Vacuolar protein sorting-associated protein 60.2 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LPN5	6.9e-45	53.67	Vacuolar protein sorting-associated protein 60.1 OS=Arabidopsis thaliana OX=3702...	[more]
Q54JK4	9.1e-13	47.13	Charged multivesicular body protein 5 OS=Dictyostelium discoideum OX=44689 GN=ch...	[more]
Q6DD52	8.0e-09	38.60	Charged multivesicular body protein 5 OS=Xenopus laevis OX=8355 GN=chmp5 PE=2 SV...	[more]
Q9D7S9	3.0e-08	30.77	Charged multivesicular body protein 5 OS=Mus musculus OX=10090 GN=Chmp5 PE=1 SV=...	[more]

BLAST of IVF0006750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CBJ0	1.0e-51	61.64	Charged multivesicular body protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0KWL4	1.0e-51	61.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G613490 PE=4 SV=1	[more]
A0A1S3BFT5	1.0e-51	61.64	charged multivesicular body protein 5 OS=Cucumis melo OX=3656 GN=LOC103489370 PE...	[more]
A0A5A7UDQ8	1.9e-50	92.44	Charged multivesicular body protein 5-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5D3DCL2	2.5e-50	99.08	Charged multivesicular body protein 5-like OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of IVF0006750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446740.1	3.14e-65	61.64	PREDICTED: charged multivesicular body protein 5 [Cucumis melo] >TYK09191.1 char...	[more]
XP_004135046.1	3.14e-65	61.64	vacuolar protein sorting-associated protein 60.1 [Cucumis sativus] >XP_031741404...	[more]
XP_008463129.1	4.85e-65	99.08	PREDICTED: charged multivesicular body protein 5-like [Cucumis melo]	[more]
TYK21411.1	2.12e-64	99.08	charged multivesicular body protein 5-like [Cucumis melo var. makuwa]	[more]
KAA0051835.1	2.86e-64	97.32	charged multivesicular body protein 5-like [Cucumis melo var. makuwa]	[more]

BLAST of IVF0006750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04850.1	5.8e-47	55.05	SNF7 family protein	[more]
AT3G10640.1	4.9e-46	53.67	SNF7 family protein	[more]
AT3G10640.2	1.2e-44	65.75	SNF7 family protein	[more]
AT5G04850.2	2.1e-41	47.06	SNF7 family protein	[more]
AT2G19830.1	6.1e-04	36.76	SNF7 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 136..156
None	No IPR available	GENE3D	6.10.250.1710		coord: 131..184 e-value: 4.2E-22 score: 79.8
None	No IPR available	PANTHER	PTHR22761	CHARGED MULTIVESICULAR BODY PROTEIN	coord: 57..226
None	No IPR available	PANTHER	PTHR22761:SF66	CHARGED MULTIVESICULAR BODY PROTEIN 5-LIKE	coord: 57..226
IPR005024	Snf7 family	PFAM	PF03357	Snf7	coord: 112..215 e-value: 1.5E-24 score: 86.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0006750.2	IVF0006750.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032511	late endosome to vacuole transport via multivesicular body sorting pathway
biological_process	GO:0006415	translational termination
biological_process	GO:0006900	vesicle budding from membrane
biological_process	GO:0007034	vacuolar transport
cellular_component	GO:0005771	multivesicular body