IVF0006666 (gene) Melon (IVF77) v1

Overview
NameIVF0006666
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMethyltransf_11 domain-containing protein
Locationchr07: 17385976 .. 17386167 (-)
RNA-Seq ExpressionIVF0006666
SyntenyIVF0006666
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATGGAGTATTTTAAATCTGTTGAAGGTGGTCTTTTAGTGGATGCAAGCTGTGGTAGTGGTTTGTTTTCCAGAAAATTTGCAATATCTTGATCCTTCTCAGGTGTAATTGCTCTTGATTTCTCTAAGAATATGCTTCTTCAATGTTATGACTTCATTAAGAAAGATGTTACTCTCTTGAATAGGTAA

mRNA sequence

ATGGCCATGGAGTATTTTAAATCTGTTGAAGGTGGTCTTTTAGTGGATGCAAGCTGTGGTAGTGGTGTAATTGCTCTTGATTTCTCTAAGAATATGCTTCTTCAATGTTATGACTTCATTAAGAAAGATGTTACTCTCTTGAATAGGTAA

Coding sequence (CDS)

ATGGCCATGGAGTATTTTAAATCTGTTGAAGGTGGTCTTTTAGTGGATGCAAGCTGTGGTAGTGGTGTAATTGCTCTTGATTTCTCTAAGAATATGCTTCTTCAATGTTATGACTTCATTAAGAAAGATGTTACTCTCTTGAATAGGTAA

Protein sequence

MAMEYFKSVEGGLLVDASCGSGVIALDFSKNMLLQCYDFIKKDVTLLNR
Homology
[Close]
BLAST of IVF0006666 vs. ExPASy Swiss-Prot
Match: Q0WPT7 (Uncharacterized methyltransferase At2g41040, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g41040 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 9.7e-10
Identity = 35/62 (56.45%), Postives = 38/62 (61.29%), Query Frame = 0 

Query: 1   MAMEYFKSVEGGLLVDASCG--------------SGVIALDFSKNMLLQCYDFIKKDVTL 49
           MA EYFK  EGGLLVD SCG              SGVIALD+S+NML QC +FIK D T 
Sbjct: 175 MAEEYFKEAEGGLLVDVSCGSGLFSRKFAQSGKYSGVIALDYSENMLRQCKEFIKNDNTF 234

[Close]
BLAST of IVF0006666 vs. ExPASy Swiss-Prot
Match: Q8LBV4 (Uncharacterized methyltransferase At1g78140, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g78140 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 7.7e-07
Identity = 28/63 (44.44%), Postives = 36/63 (57.14%), Query Frame = 0 

Query: 1   MAMEYFKSVEGGLLVDASCGSG--------------VIALDFSKNMLLQCYDFIKKDVTL 50
           MA  Y K V GG ++DASCGSG              VIALD+S+NML QCY+ + K+   
Sbjct: 173 MAKAYLKPVLGGNIIDASCGSGMFSRLFTRSDLFSLVIALDYSENMLRQCYELLNKEENF 232

[Close]
BLAST of IVF0006666 vs. ExPASy TrEMBL
Match: A0A5A7VAW1 (Putative methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00970 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.0e-14
Identity = 46/62 (74.19%), Postives = 47/62 (75.81%), Query Frame = 0 

Query: 1   MAMEYFKSVEGGLLVDASCG--------------SGVIALDFSKNMLLQCYDFIKKDVTL 49
           MAMEYFKSVEGGLLVDASCG              SGVIALDFS+NMLLQCYDFIKKD TL
Sbjct: 162 MAMEYFKSVEGGLLVDASCGSGLFSRKFAKSGSFSGVIALDFSENMLLQCYDFIKKDATL 221

[Close]
BLAST of IVF0006666 vs. ExPASy TrEMBL
Match: A0A0A0LG50 (Methyltransf_11 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009410 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.0e-14
Identity = 46/62 (74.19%), Postives = 47/62 (75.81%), Query Frame = 0 

Query: 1   MAMEYFKSVEGGLLVDASCGS--------------GVIALDFSKNMLLQCYDFIKKDVTL 49
           MAMEYFKSVEGGLLVDASCGS              GVIALDFS+NMLLQCYDFIKKD TL
Sbjct: 162 MAMEYFKSVEGGLLVDASCGSGLFSRKFAKSGSFAGVIALDFSENMLLQCYDFIKKDATL 221

[Close]
BLAST of IVF0006666 vs. ExPASy TrEMBL
Match: A0A1S3C4D9 (uncharacterized methyltransferase At2g41040, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496525 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.0e-14
Identity = 46/62 (74.19%), Postives = 47/62 (75.81%), Query Frame = 0 

Query: 1   MAMEYFKSVEGGLLVDASCG--------------SGVIALDFSKNMLLQCYDFIKKDVTL 49
           MAMEYFKSVEGGLLVDASCG              SGVIALDFS+NMLLQCYDFIKKD TL
Sbjct: 162 MAMEYFKSVEGGLLVDASCGSGLFSRKFAKSGSFSGVIALDFSENMLLQCYDFIKKDATL 221

[Close]
BLAST of IVF0006666 vs. ExPASy TrEMBL
Match: A0A1S3C3A2 (uncharacterized methyltransferase At2g41040, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496525 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.0e-14
Identity = 46/62 (74.19%), Postives = 47/62 (75.81%), Query Frame = 0 

Query: 1   MAMEYFKSVEGGLLVDASCG--------------SGVIALDFSKNMLLQCYDFIKKDVTL 49
           MAMEYFKSVEGGLLVDASCG              SGVIALDFS+NMLLQCYDFIKKD TL
Sbjct: 162 MAMEYFKSVEGGLLVDASCGSGLFSRKFAKSGSFSGVIALDFSENMLLQCYDFIKKDATL 221

[Close]
BLAST of IVF0006666 vs. ExPASy TrEMBL
Match: A0A6J1HLD0 (uncharacterized methyltransferase At2g41040, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111465594 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 8.8e-14
Identity = 45/62 (72.58%), Postives = 46/62 (74.19%), Query Frame = 0 

Query: 1   MAMEYFKSVEGGLLVDASCG--------------SGVIALDFSKNMLLQCYDFIKKDVTL 49
           MAMEYFKS EGGLLVDASCG              SGVIALDFS+NMLLQCYDFIKKD TL
Sbjct: 162 MAMEYFKSAEGGLLVDASCGSGLFSRKFAKSGAFSGVIALDFSENMLLQCYDFIKKDATL 221

[Close]
BLAST of IVF0006666 vs. NCBI nr
Match: XP_008456635.1 (PREDICTED: uncharacterized methyltransferase At2g41040, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 87.0 bits (214), Expect = 1.17e-18
Identity = 46/62 (74.19%), Postives = 47/62 (75.81%), Query Frame = 0 

Query: 1   MAMEYFKSVEGGLLVDASCGSG--------------VIALDFSKNMLLQCYDFIKKDVTL 48
           MAMEYFKSVEGGLLVDASCGSG              VIALDFS+NMLLQCYDFIKKD TL
Sbjct: 162 MAMEYFKSVEGGLLVDASCGSGLFSRKFAKSGSFSGVIALDFSENMLLQCYDFIKKDATL 221

[Close]
BLAST of IVF0006666 vs. NCBI nr
Match: XP_004139262.1 (uncharacterized methyltransferase At2g41040, chloroplastic [Cucumis sativus])

HSP 1 Score: 87.0 bits (214), Expect = 1.17e-18
Identity = 46/62 (74.19%), Postives = 47/62 (75.81%), Query Frame = 0 

Query: 1   MAMEYFKSVEGGLLVDASCGSG--------------VIALDFSKNMLLQCYDFIKKDVTL 48
           MAMEYFKSVEGGLLVDASCGSG              VIALDFS+NMLLQCYDFIKKD TL
Sbjct: 162 MAMEYFKSVEGGLLVDASCGSGLFSRKFAKSGSFAGVIALDFSENMLLQCYDFIKKDATL 221

[Close]
BLAST of IVF0006666 vs. NCBI nr
Match: XP_008456627.1 (PREDICTED: uncharacterized methyltransferase At2g41040, chloroplastic isoform X1 [Cucumis melo] >KAA0063556.1 putative methyltransferase [Cucumis melo var. makuwa] >TYJ97883.1 putative methyltransferase [Cucumis melo var. makuwa])

HSP 1 Score: 87.0 bits (214), Expect = 1.18e-18
Identity = 46/62 (74.19%), Postives = 47/62 (75.81%), Query Frame = 0 

Query: 1   MAMEYFKSVEGGLLVDASCGSG--------------VIALDFSKNMLLQCYDFIKKDVTL 48
           MAMEYFKSVEGGLLVDASCGSG              VIALDFS+NMLLQCYDFIKKD TL
Sbjct: 162 MAMEYFKSVEGGLLVDASCGSGLFSRKFAKSGSFSGVIALDFSENMLLQCYDFIKKDATL 221

[Close]
BLAST of IVF0006666 vs. NCBI nr
Match: KGN60753.1 (hypothetical protein Csa_019482 [Cucumis sativus])

HSP 1 Score: 87.0 bits (214), Expect = 1.18e-18
Identity = 46/62 (74.19%), Postives = 47/62 (75.81%), Query Frame = 0 

Query: 1   MAMEYFKSVEGGLLVDASCGSG--------------VIALDFSKNMLLQCYDFIKKDVTL 48
           MAMEYFKSVEGGLLVDASCGSG              VIALDFS+NMLLQCYDFIKKD TL
Sbjct: 162 MAMEYFKSVEGGLLVDASCGSGLFSRKFAKSGSFAGVIALDFSENMLLQCYDFIKKDATL 221

[Close]
BLAST of IVF0006666 vs. NCBI nr
Match: XP_038889838.1 (uncharacterized methyltransferase At2g41040, chloroplastic [Benincasa hispida])

HSP 1 Score: 86.3 bits (212), Expect = 2.27e-18
Identity = 46/62 (74.19%), Postives = 47/62 (75.81%), Query Frame = 0 

Query: 1   MAMEYFKSVEGGLLVDASCGSG--------------VIALDFSKNMLLQCYDFIKKDVTL 48
           MAMEYFKSVEGGLLVDASCGSG              VIALDFS+NMLLQCYDFIKKD TL
Sbjct: 162 MAMEYFKSVEGGLLVDASCGSGLFSRKFAKSGSFSGVIALDFSENMLLQCYDFIKKDSTL 221

[Close]
BLAST of IVF0006666 vs. TAIR 10
Match: AT2G41040.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 6.9e-11
Identity = 35/62 (56.45%), Postives = 38/62 (61.29%), Query Frame = 0 

Query: 1   MAMEYFKSVEGGLLVDASCG--------------SGVIALDFSKNMLLQCYDFIKKDVTL 49
           MA EYFK  EGGLLVD SCG              SGVIALD+S+NML QC +FIK D T 
Sbjct: 175 MAEEYFKEAEGGLLVDVSCGSGLFSRKFAQSGKYSGVIALDYSENMLRQCKEFIKNDNTF 234

[Close]
BLAST of IVF0006666 vs. TAIR 10
Match: AT1G78140.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 53.5 bits (127), Expect = 5.5e-08
Identity = 28/63 (44.44%), Postives = 36/63 (57.14%), Query Frame = 0 

Query: 1   MAMEYFKSVEGGLLVDASCGSG--------------VIALDFSKNMLLQCYDFIKKDVTL 50
           MA  Y K V GG ++DASCGSG              VIALD+S+NML QCY+ + K+   
Sbjct: 173 MAKAYLKPVLGGNIIDASCGSGMFSRLFTRSDLFSLVIALDYSENMLRQCYELLNKEENF 232

The following BLAST results are available for this feature:
BLAST of IVF0006666 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q0WPT79.7e-1056.45Uncharacterized methyltransferase At2g41040, chloroplastic OS=Arabidopsis thalia... [more]
Q8LBV47.7e-0744.44Uncharacterized methyltransferase At1g78140, chloroplastic OS=Arabidopsis thalia... [more]
BLAST of IVF0006666 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VAW13.0e-1474.19Putative methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... [more]
A0A0A0LG503.0e-1474.19Methyltransf_11 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G00... [more]
A0A1S3C4D93.0e-1474.19uncharacterized methyltransferase At2g41040, chloroplastic isoform X2 OS=Cucumis... [more]
A0A1S3C3A23.0e-1474.19uncharacterized methyltransferase At2g41040, chloroplastic isoform X1 OS=Cucumis... [more]
A0A6J1HLD08.8e-1472.58uncharacterized methyltransferase At2g41040, chloroplastic OS=Cucurbita maxima O... [more]
BLAST of IVF0006666 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008456635.11.17e-1874.19PREDICTED: uncharacterized methyltransferase At2g41040, chloroplastic isoform X2... [more]
XP_004139262.11.17e-1874.19uncharacterized methyltransferase At2g41040, chloroplastic [Cucumis sativus][more]
XP_008456627.11.18e-1874.19PREDICTED: uncharacterized methyltransferase At2g41040, chloroplastic isoform X1... [more]
KGN60753.11.18e-1874.19hypothetical protein Csa_019482 [Cucumis sativus][more]
XP_038889838.12.27e-1874.19uncharacterized methyltransferase At2g41040, chloroplastic [Benincasa hispida][more]
BLAST of IVF0006666 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G41040.16.9e-1156.45S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [more]
AT1G78140.15.5e-0844.44S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0006666.1IVF0006666.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006744 ubiquinone biosynthetic process
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0016491 oxidoreductase activity