IVF0006663 (gene) Melon (IVF77) v1

Overview
NameIVF0006663
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionStress response protein NST1-like
Locationchr11: 10870687 .. 10870944 (-)
RNA-Seq ExpressionIVF0006663
SyntenyIVF0006663
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGCGAGAAGAAAGCATCTACCATGGGTTAAGTAACCTAGAGCCTAGGGTGAATGTTATGCGGCTCGATAATGATCAGTCGAGTTACAAGCATGTGAAGCATGACACTAGTAAAGTAATTATGGGAGTGGGTGAGACGAATAAGACAAGTGAGATCAAAGTGCCTGTTGAGTACTCTAGCCAAGTGTTAAAATTCTTTAAAGAGTTGGGAGCAAGAAAAAAGAACAGAGCTGAGGATATGAGAAGAAAAAAATAA

mRNA sequence

ATGAGGCGAGAAGAAAGCATCTACCATGGGTTAAGTAACCTAGAGCCTAGGGTGAATGTTATGCGGCTCGATAATGATCAGTCGAGTTACAAGCATGTGAAGCATGACACTAGTAAAGTAATTATGGGAGTGGGTGAGACGAATAAGACAAGTGAGATCAAAGTGCCTGTTGAGTACTCTAGCCAAGTGTTAAAATTCTTTAAAGAGTTGGGAGCAAGAAAAAAGAACAGAGCTGAGGATATGAGAAGAAAAAAATAA

Coding sequence (CDS)

ATGAGGCGAGAAGAAAGCATCTACCATGGGTTAAGTAACCTAGAGCCTAGGGTGAATGTTATGCGGCTCGATAATGATCAGTCGAGTTACAAGCATGTGAAGCATGACACTAGTAAAGTAATTATGGGAGTGGGTGAGACGAATAAGACAAGTGAGATCAAAGTGCCTGTTGAGTACTCTAGCCAAGTGTTAAAATTCTTTAAAGAGTTGGGAGCAAGAAAAAAGAACAGAGCTGAGGATATGAGAAGAAAAAAATAA

Protein sequence

MRREESIYHGLSNLEPRVNVMRLDNDQSSYKHVKHDTSKVIMGVGETNKTSEIKVPVEYSSQVLKFFKELGARKKNRAEDMRRKK
Homology
BLAST of IVF0006663 vs. ExPASy TrEMBL
Match: A0A5A7V3K9 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G001420 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.1e-11
Identity = 36/55 (65.45%), Postives = 46/55 (83.64%), Query Frame = 0

Query: 2   RREESIYHGLSNLEPRVNVMRLDNDQSSYKHVKHDTSKVIMGVGETNKTSEIKVP 57
           RREE+IYHGL +L+PRV+ M LDNDQ SYKHVKH+  KVI+G+ E ++ SEI+VP
Sbjct: 81  RREENIYHGLVDLKPRVSTMGLDNDQLSYKHVKHEAGKVILGIEELSEASEIEVP 135

BLAST of IVF0006663 vs. ExPASy TrEMBL
Match: A0A0A0LBC4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G769640 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.6e-10
Identity = 36/61 (59.02%), Postives = 50/61 (81.97%), Query Frame = 0

Query: 21 MRLDNDQSSYKHVKHDTSKVIMGVGETNKTSEIKVPVEYSSQVLKFFKELGAR-KKNRAE 80
          MRLD++Q +YKHVKH T+K+IM + ++++  EIKVP +Y+SQVLKF  ELGAR KK +AE
Sbjct: 1  MRLDDEQLNYKHVKHGTNKLIMEIDKSSEAGEIKVPAQYASQVLKFLDELGARDKKKKAE 60

BLAST of IVF0006663 vs. ExPASy TrEMBL
Match: A0A0A0LXZ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G652210 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 7.8e-10
Identity = 38/85 (44.71%), Postives = 57/85 (67.06%), Query Frame = 0

Query: 1  MRREESIYHGLSNLEPRVNVMRLDND-QSSYKHVKHDTSKVIMGVGETNKTSEIKVPVEY 60
          MR+EE+IYH  ++LE R+  +RLD+     YKH+KH  SK+ + VG  ++  EIKVP +Y
Sbjct: 1  MRQEEAIYHDFTDLESRMGRIRLDDGVPPKYKHMKHYASKIDLRVGGPSEKEEIKVPTKY 60

Query: 61 SSQVLKFFKELGARKKNRAEDMRRK 85
          S +V KF KEL   +K + E+ R++
Sbjct: 61 SDKVKKFIKELEVEEKKKKEEERKR 85

BLAST of IVF0006663 vs. ExPASy TrEMBL
Match: A0A5D3DPW8 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00130 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.3e-08
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 0

Query: 1   MRREESIYHGLSNLEPRVNVMRLDNDQSSYKHVKHDTSKVIMGVGETNKTSEIKVPVEYS 60
           M ++E+I  GL NLEP +  M LD +Q  YKH KH  SKV++   E +     +VP ++ 
Sbjct: 96  MGQKENICKGLPNLEPGMETMWLDKNQPRYKHTKHGVSKVLVSHIEASDKEGTQVPSQFF 155

Query: 61  SQVLKFFKELGARKKNRAEDMRRKK 86
            +VL+F KEL A K+ ++E + RKK
Sbjct: 156 DKVLEFIKELEAAKRKKSEVVERKK 180

BLAST of IVF0006663 vs. ExPASy TrEMBL
Match: A0A1S3CKM2 (stress response protein NST1-like OS=Cucumis melo OX=3656 GN=LOC103502045 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.3e-08
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 0

Query: 1   MRREESIYHGLSNLEPRVNVMRLDNDQSSYKHVKHDTSKVIMGVGETNKTSEIKVPVEYS 60
           M ++E+I  GL NLEP +  M LD +Q  YKH KH  SKV++   E +     +VP ++ 
Sbjct: 96  MGQKENICKGLPNLEPGMETMWLDKNQPRYKHTKHGVSKVLVSHIEASDKEGTQVPSQFF 155

Query: 61  SQVLKFFKELGARKKNRAEDMRRKK 86
            +VL+F KEL A K+ ++E + RKK
Sbjct: 156 DKVLEFIKELEAAKRKKSEVVERKK 180

BLAST of IVF0006663 vs. NCBI nr
Match: KAA0060351.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 3.92e-16
Identity = 36/55 (65.45%), Postives = 46/55 (83.64%), Query Frame = 0

Query: 2   RREESIYHGLSNLEPRVNVMRLDNDQSSYKHVKHDTSKVIMGVGETNKTSEIKVP 56
           RREE+IYHGL +L+PRV+ M LDNDQ SYKHVKH+  KVI+G+ E ++ SEI+VP
Sbjct: 81  RREENIYHGLVDLKPRVSTMGLDNDQLSYKHVKHEAGKVILGIEELSEASEIEVP 135

BLAST of IVF0006663 vs. NCBI nr
Match: KAE8645984.1 (hypothetical protein Csa_015479 [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 7.96e-15
Identity = 36/61 (59.02%), Postives = 50/61 (81.97%), Query Frame = 0

Query: 21 MRLDNDQSSYKHVKHDTSKVIMGVGETNKTSEIKVPVEYSSQVLKFFKELGAR-KKNRAE 80
          MRLD++Q +YKHVKH T+K+IM + ++++  EIKVP +Y+SQVLKF  ELGAR KK +AE
Sbjct: 1  MRLDDEQLNYKHVKHGTNKLIMEIDKSSEAGEIKVPAQYASQVLKFLDELGARDKKKKAE 60

BLAST of IVF0006663 vs. NCBI nr
Match: KGN66638.1 (hypothetical protein Csa_007234 [Cucumis sativus])

HSP 1 Score: 71.2 bits (173), Expect = 5.83e-14
Identity = 38/84 (45.24%), Postives = 56/84 (66.67%), Query Frame = 0

Query: 1  MRREESIYHGLSNLEPRVNVMRLDND-QSSYKHVKHDTSKVIMGVGETNKTSEIKVPVEY 60
          MR+EE+IYH  ++LE R+  +RLD+     YKH+KH  SK+ + VG  ++  EIKVP +Y
Sbjct: 1  MRQEEAIYHDFTDLESRMGRIRLDDGVPPKYKHMKHYASKIDLRVGGPSEKEEIKVPTKY 60

Query: 61 SSQVLKFFKELGARKKNRAEDMRR 83
          S +V KF KEL   +K + E+ R+
Sbjct: 61 SDKVKKFIKELEVEEKKKKEEERK 84

BLAST of IVF0006663 vs. NCBI nr
Match: XP_008464070.1 (PREDICTED: stress response protein NST1-like [Cucumis melo])

HSP 1 Score: 64.7 bits (156), Expect = 2.80e-10
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 0

Query: 1   MRREESIYHGLSNLEPRVNVMRLDNDQSSYKHVKHDTSKVIMGVGETNKTSEIKVPVEYS 60
           M ++E+I  GL NLEP +  M LD +Q  YKH KH  SKV++   E +     +VP ++ 
Sbjct: 96  MGQKENICKGLPNLEPGMETMWLDKNQPRYKHTKHGVSKVLVSHIEASDKEGTQVPSQFF 155

Query: 61  SQVLKFFKELGARKKNRAEDMRRKK 85
            +VL+F KEL A K+ ++E + RKK
Sbjct: 156 DKVLEFIKELEAAKRKKSEVVERKK 180

BLAST of IVF0006663 vs. NCBI nr
Match: TYK25721.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 64.7 bits (156), Expect = 8.88e-10
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 0

Query: 1   MRREESIYHGLSNLEPRVNVMRLDNDQSSYKHVKHDTSKVIMGVGETNKTSEIKVPVEYS 60
           M ++E+I  GL NLEP +  M LD +Q  YKH KH  SKV++   E +     +VP ++ 
Sbjct: 96  MGQKENICKGLPNLEPGMETMWLDKNQPRYKHTKHGVSKVLVSHIEASDKEGTQVPSQFF 155

Query: 61  SQVLKFFKELGARKKNRAEDMRRKK 85
            +VL+F KEL A K+ ++E + RKK
Sbjct: 156 DKVLEFIKELEAAKRKKSEVVERKK 180

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V3K91.1e-1165.45Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A0A0LBC44.6e-1059.02Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G769640 PE=4 SV=1[more]
A0A0A0LXZ87.8e-1044.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G652210 PE=4 SV=1[more]
A0A5D3DPW87.3e-0842.35Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S3CKM27.3e-0842.35stress response protein NST1-like OS=Cucumis melo OX=3656 GN=LOC103502045 PE=4 S... [more]
Match NameE-valueIdentityDescription
KAA0060351.13.92e-1665.45stress response protein NST1-like [Cucumis melo var. makuwa][more]
KAE8645984.17.96e-1559.02hypothetical protein Csa_015479 [Cucumis sativus][more]
KGN66638.15.83e-1445.24hypothetical protein Csa_007234 [Cucumis sativus][more]
XP_008464070.12.80e-1042.35PREDICTED: stress response protein NST1-like [Cucumis melo][more]
TYK25721.18.88e-1042.35stress response protein NST1-like [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0006663.1IVF0006663.1mRNA