IVF0006653 (gene) Melon (IVF77) v1

Overview


Name	IVF0006653
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	LINE-1 retrotransposable element ORF2 protein
Location	chr03: 1658676 .. 1663950 (-)
RNA-Seq Expression	IVF0006653
Synteny	IVF0006653

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCTCCTTTCATTATACTAAATTCACCTGAATTCACCCACTGTATTAACTACAAATCCAGCCTTTTACTTGCTGTTAAAAGGTCACTTTCATCTCCAGTTCTTTTCACTGCTTTTCACCTTCCTTCCTTGGTTTTTCCTACAATCTCCCAAACAATGGCCTACTTCAAATCACTTCCTAGATCATGTAAGGTTGAAAGAAAGGAATTTGTCCTTCACCTTGACAAATATTCAAAGCACACTCATTATTGGTTAACAGAAACTGGAGCTCATAAGGCTTTCTCCATTGAAGTTTCCCCAAAAGACTTGGACTGGATAAGATGTACTCTGAAATCCTTGATCGCAACCCCAAATACAAACCGATTCTTCCTTGAGACCCGTGACTCTGAGCAATGCATCTGGATCAGGAAAACAAGAAATAGTAAAGGATGTACTGCAGAAATTTTTAGAGTTGATCAAAAAAACAGAAAATCATGTATCCTAGTTCCGGAAGGACCTGAGAAAAGTGGCTGGGTCTCCTTCCTATCCATGATTACCCCAAAAGTAGAAGTGAAAGCAAAAACAAGACCAACTTTTTTGCCAAGGTCCAGTCCTGACGGTCGTCTTTCTCCTCCCATTGACTACCACAAGCGATCATACGCAAGAGCTGTCACAGAAGGAAGAGCTACAAGTGACTCAAGTGACTCTTATGATACAAGCGATTCGAGTCATTCATCAGGTAATAGTTTTTGTGACTCTCCCTCATCTGATCTTCTTGAAAATACAGTGGTGATAGTTAGACGATTCTTTCATGATGACTGGCACAAAATCCTTCAAAACCTGAGAAAACAAACAGAGGAATCTTTCACTTATAATGCTTTCCATGCTGAAAAAGCTTTAGTTCATTTTAGCTCAAACATACCTGCAAACCTTCTCTGCCAGAACAAAGGATGGACCACGGTAGGAAAGTACTCGGTAAAATTTGAAAAATGGTCCTCTGCGTATCACGCCACTCCAAAACTTATTCCTAGTTATGGAGGATGGACAACTTTCAGAGGAATTCCACTACACTTGTGGAATATGACGACTTTTCAACAACTTGGAAAAGCCTGCGGAGGTTTGATTAAAGTGGCTGAGGAAACAAGATCAGCAAAAAACCTGGTAAAAGCAAGGATAAAGGTTAGATACAATTACTCAGGCTTCTTACCAGCAAATGTAAGGATTTTTGATAATGAGGGAAACAAATTTTCCATCCAAGTAGTTACTCACCCAGAAGGCAAATGGTTAATAGAAAGGAATGTCAGATTACATGGCACCTTCAAGAGACAAGCTGCAGCCGCCTTTGATGAATTCAATCCTGAATCAGAGCAATTCTTCTTCGAAGGAATGGAGGCCATATCGCCGGACTTCCTTTCCACTAGCTCCGACGGCCGTAAAAGCAACACACCGGATCAGCCACCTGCATTAAAATCTGTTATCATTAAATCTGACAGAGTTGCCACGTCGCCAAGCTTCTTAAATGAAGAGGTAGTTAATGATAGTAATTTGCATGCAACGGCTAACAAATCCAAATCAGAGATATTACCTGGGATATCAAATGATGGCGTGTTGGACAAAGGAAAACAGAAGGTTGACATTCAGCTTCAACCCAATTCAGCATTAAATTTGGATAAATCCAAAAGGAAAGTCTCCTTCAACTCTCCCTGTAATAAAACCAACATCTTCAATCCGGATTCTGCTCCAGCCAATCATTCTCCATCATTAAGTTCCCCTGAAAAAAAACAGAAAGTAAGTAGAGAGAGAAGTATCAAGAAGAGATTGCCTTCCACTCAGCCGAATTCAAAAGCCGATCAGAAGAAAGATGTATCAATTACTCAACCAATTTAAATTGTGGCGCACGATCGGGAAGCTTCCAAAAAAGGTCTCTCTCTCACTGTTGATCTGGGAGATCTGCCAGTTTTGGATCCAAATAAATCATTTGAAGACCACCACAGCTCTGATAATGCAGAAGTTATTGATATAACAAACACTGAAGTGGTTCCTGAGACACCTGAAATGAAAATGCAAGTTAATGAGAATTCAAATTCTTCTTCTGAAGCCAACTACAGGAAACCAAAACATGTTCATAAAAGAAAATACTACTACAGGAAAAAAGAAGAAAAGGAGAAGGATCCGGACTCAAAGGCCTTCAAAAAACAACTTGCTTCCTGGTTGAAGGAAAATGGTCTGAAAATCTCTACGGTCACTGACTCTTCAGGGGCAACTACTTCAACAAATGTTTTGATAAATCAATTGAATTCTGGGTTAGCTTCAAAGGGGATAGGGGCTTTGGGGACATCTATTGTAAAATGAAATTGCTTATTTGGAATGCAAGAGGTTTAGGCTCCCCTTCTAAAAGAGCCCGAATAAAAAATACAATAATTTCATACTCCCCTGACTTTGTGATTCTGACTGAAACTAGGCTTAAGATCACAAACAAGAGAATCATTAAGTCCCTTTGGCCCTCTAACAGCATTAATTGGGTTGCTAAAAATGCTTCGGGTAGTTCTGGAGGGATCTTAATTCTTTGAGATGCCCAGAATCATTCCCTTTTATGTCACGAGGAAGGGCTTTTTAGCCTATCAGCAAATTTTTTGTTCAACAACAATTTGTCCTGGTGGCTAACAGGTCTTTATGGTCCAGTCAAAAGGAGGGAAAGAATTCATTTTTGGACAGAGCTTCATAATCTTCAACATCTTAATTCCCTCCCTTGGATCTTAGGAGGTGATCTTAATGTCATCAGAATGAGAGAGGAATCAACGTCAGTTTCTAGCTCTTCTCACAGCTCCAGAATGTTGAACAATTTCATCACCAACAATCTTCTGATAGATCCTCCCTCATAAACAATAGATTCACTTGGTCAAACTTACGGAATCCTCCTACTTTTTCCAGAATTGATAGATTCCTTTACAACTCAACTTGGGAAAATCTCTTCAGTCCCCACACAACAAGGACCCTTCCTAGATCTACTTCAGATCACTTTCCTCTGGTCTGTGAAAACTCCAACACCAAGCTTAGTTGGGGTCCTGTCCCATTCCGTTTAAACTCCATAGCTCTCAGTGACCCAGAATTCAAAAGAAACATGGGAAGATGGTGGGAAAACTCGATCCAAGATGGTCATCCAGGTTTCTCCTTCATCCAAAGGCTAAAGTCTTTAGCAAATTTTATCAAACCTTGGCAAAAGGAGAAATTACACTCTCTCACCCATGCTAAAGATAGCATTTTAAGGGAAGTGGACTCTATTGACAAAAAGGAATTGGATACTCCTTTGACTCAAGAGGAAAGTAATCGTCGTCTAGCCCTAAAAGCTGATCTCAGCGAGCTATCTCTCAAGGAGTCCCAATTCTGGTACCAAAGGGCTAAAAAGCTTTGGCTTAGGGAGGGAGATGAAAACTCCTCCTTCTTTCATAGAATTTGCTCATCAAGACAAAAGAGAAGTTTCATTCATGAAATCCAGGATGAAGAAGGTTTGATTCAGAATACAAACATCAGTATATCAACTGCTTTTATAAAATTCTTTTCAAAGATTTATAGAAGCTCTACAAAAAGTGATCCTCTTTTTATAGATAATCTAGATTGGAATCCGATAGAGCATTCTGAGTGGTCGCACCTTTGTGCCCCTTTTTTGGAAGATGAGATTAAAGGGGTTATAAACTCTTTAGATGGAAAAAAGACTCCTGGTCTAGACGGCTTCCCTATCTCCTTCTTTAAAACTTACTGGTATCTTCTAAAAGAGGATATCTTGGACATATTCAAGGATTTTTATGACAAAGGTGTTATCAACAAGAATATGAATAACACCTACATTGCTTTGATCCCAAAAAAGAAGGATTATTCTCATCCCAAAGACTTCAGACCAATCAGCCTAACAACGTCCATCTATAAGATCATTGCCAAAACTCTTTCAAACAGGTTAAAAACCACCCTTCCTGACACCATCTCAGGAAACCAGCTAGCTTTTGTCAAGAATCGCCAAATTACTGATGCTATCCTAATGGCAAATGAAGCTGTGGATTTTTGGAAGGTGAAGAAGATAAAGGGCTTTATTTTGAAGCTTGACATTGAAAAGGCTTTTGACAAGTTAAATTGGGATTTCATCGATTTTGTCCTGGAGAAAAAGAATTTTCCAATCCTTTGGAGAAAGTGGATAAGAGGATGTATAAGCAATGTCACTTACTCTGTTATTGTCAACGGAAGACCTCAAGGTCGTATTAAAGCTAACAGAGGTCTTAGACAAGGTGATCCCCTTTCCCCTTTTCTATTTGTTATTGCCATGGATTACCTTAGTCGTCTCTTATCACATCTGGAAAGTTCTGGTGCAATTAAAGGGGTATCTCTCAACAGTAATTGCAACATCTCTCACATCCTTTTCGCTGATGATATTCTTCTTTTCATAGAAGATAATGATTATTTTCTGAATAACCTTAGAATGGCTTTATCTCTGTTCGAAAGAGCTTCGAGTCTCAAAATAAACTTATTGAAATCAGCTCTGGTGCCAATGAATGTGTCCGTGAATAGAGCTAAAGAATGTGCTTCGATTTGGGGTATTCCTTGCCACTCTCTCCCCCTCTCCTACTTGGGAGTTCCTCTTGGTGGCAATCCAAAATCCAACCTTTTTTGGCGCAACGTTGAAGATAAGATCCAAAAAAAGCTCAATAATTGGAAATATGCTCAGATATCAAAAGGTGGAAGACTCACTTTAATCAAGTCTACCCTTAGCAGTCTTCCTATTTATCAACTATCTGTTTTCCAAGCTCCTTCCATGACGTGCAAAAACATTGAAAAATCCTGGAGAAAGTTCCTTTGGAAAGGTAATAACGGATCTGTAGGATCCCACCTAATCAACTGGACTAAAGTCTCTAAATCTAAAGAGGAGGGTGGGCTGGGTACCTCAAGGCTTCATGTGACAAATAAAGCCCTCTTAACTAAGTGGCTCTGGCGTTATCTCTCGGAACCTAATGCCCTTTGGAGGAGACTGATTCAATGCAAATATAAAGGCAACTATCCAGGAGACATTCCATCAAACATCTCCTCTATTACTTCTAAAGCCCCGTGGAGATCTATCATTGACAACATTGATTGGTTCAAAAGTAATCAAAGTTGGGAACTGAATAATGGAGATCAAATCTCCTTTTGGTATTCTAATTGGTCTCTAGAAGGTCGTCTCTCAACTGCCTATCCTAGACTTTTTGCTCTTACTCTTGACAAAGAAATCTCAGTTAAAGATGCGTGGAACACATTCGATAACCGATGA

mRNA sequence

ATGGCGGCTCCTTTCATTATACTAAATTCACCTGAATTCACCCACTGTATTAACTACAAATCCAGCCTTTTACTTGCTGTTAAAAGGTCACTTTCATCTCCAGTTCTTTTCACTGCTTTTCACCTTCCTTCCTTGGTTTTTCCTACAATCTCCCAAACAATGGCCTACTTCAAATCACTTCCTAGATCATGTAAGGTTGAAAGAAAGGAATTTGTCCTTCACCTTGACAAATATTCAAAGCACACTCATTATTGGTTAACAGAAACTGGAGCTCATAAGGCTTTCTCCATTGAAGTTTCCCCAAAAGACTTGGACTGGATAAGATGTACTCTGAAATCCTTGATCGCAACCCCAAATACAAACCGATTCTTCCTTGAGACCCGTGACTCTGAGCAATGCATCTGGATCAGGAAAACAAGAAATAGTAAAGGATGTACTGCAGAAATTTTTAGAGTTGATCAAAAAAACAGAAAATCATGTATCCTAGTTCCGGAAGGACCTGAGAAAAGTGGCTGGGTCTCCTTCCTATCCATGATTACCCCAAAAGTAGAAGTGAAAGCAAAAACAAGACCAACTTTTTTGCCAAGGTCCAGTCCTGACGGTCGTCTTTCTCCTCCCATTGACTACCACAAGCGATCATACGCAAGAGCTGTCACAGAAGGAAGAGCTACAAGTGACTCAAGTGACTCTTATGATACAAGCGATTCGAGTCATTCATCAGGTAATAGTTTTTGTGACTCTCCCTCATCTGATCTTCTTGAAAATACAGTGGTGATAGTTAGACGATTCTTTCATGATGACTGGCACAAAATCCTTCAAAACCTGAGAAAACAAACAGAGGAATCTTTCACTTATAATGCTTTCCATGCTGAAAAAGCTTTAGTTCATTTTAGCTCAAACATACCTGCAAACCTTCTCTGCCAGAACAAAGGATGGACCACGGTAGGAAAGTACTCGGTAAAATTTGAAAAATGGTCCTCTGCGTATCACGCCACTCCAAAACTTATTCCTAGTTATGGAGGATGGACAACTTTCAGAGGAATTCCACTACACTTGTGGAATATGACGACTTTTCAACAACTTGGAAAAGCCTGCGGAGGTTTGATTAAAGTGGCTGAGGAAACAAGATCAGCAAAAAACCTGGTAAAAGCAAGGATAAAGGTTAGATACAATTACTCAGGCTTCTTACCAGCAAATGTAAGGATTTTTGATAATGAGGGAAACAAATTTTCCATCCAAGTAGTTACTCACCCAGAAGGCAAATGGTTAATAGAAAGGAATGTCAGATTACATGGCACCTTCAAGAGACAAGCTGCAGCCGCCTTTGATGAATTCAATCCTGAATCAGAGCAATTCTTCTTCGAAGGAATGGAGGCCATATCGCCGGACTTCCTTTCCACTAGCTCCGACGGCCGTAAAAGCAACACACCGGATCAGCCACCTGCATTAAAATCTGTTATCATTAAATCTGACAGAGTTGCCACGTCGCCAAGCTTCTTAAATGAAGAGGTAGTTAATGATAGTAATTTGCATGCAACGGCTAACAAATCCAAATCAGAGATATTACCTGGGATATCAAATGATGGCGTGTTGGACAAAGGAAAACAGAAGGTTGACATTCAGCTTCAACCCAATTCAGCATTAAATTTGGATAAATCCAAAAGGAAAGTCTCCTTCAACTCTCCCTGTAATAAAACCAACATCTTCAATCCGGATTCTGCTCCAGCCAATCATTCTCCATCATTAAGTTCCCCTGAAAAAAAACAGAAAGTAAGTAGAGAGAGAAACCACCACAGCTCTGATAATGCAGAAGTTATTGATATAACAAACACTGAAGTGGTTCCTGAGACACCTGAAATGAAAATGCAAGTTAATGAGAATTCAAATTCTTCTTCTGAAGCCAACTACAGGAAACCAAAACATGTTCATAAAAGAAAATACTACTACAGGAAAAAAGAAGAAAAGGAGAAGGATCCGGACTCAAAGGCCTTCAAAAAACAACTTGCTTCCTGGTTGAAGGAAAATGGTCTGAAAATCTCTACGGTCACTGACTCTTCAGGGGCAACTACTTCAACAAATGTTTTGATAAATCAATTGAATTCTGGGTTAGCTTCAAAGGGGATAGGGGCTTTGGGGACATCTATTCTCCAGAATGTTGAACAATTTCATCACCAACAATCTTCTGATAGATCCTCCCTCATAAACAATAGATTCACTTGGTCAAACTTACGGAATCCTCCTACTTTTTCCAGAATTGATAGATTCCTTTACAACTCAACTTGGGAAAATCTCTTCAGTCCCCACACAACAAGGACCCTTCCTAGATCTACTTCAGATCACTTTCCTCTGGTCTGTGAAAACTCCAACACCAAGCTTAGTTGGGGTCCTGTCCCATTCCGTTTAAACTCCATAGCTCTCAGTGACCCAGAATTCAAAAGAAACATGGGAAGATGGTGGGAAAACTCGATCCAAGATGGTCATCCAGGTTTCTCCTTCATCCAAAGGCTAAAGTCTTTAGCAAATTTTATCAAACCTTGGCAAAAGGAGAAATTACACTCTCTCACCCATGCTAAAGATAGCATTTTAAGGGAAGTGGACTCTATTGACAAAAAGGAATTGGATACTCCTTTGACTCAAGAGGAAAGTAATCGTCGTCTAGCCCTAAAAGCTGATCTCAGCGAGCTATCTCTCAAGGAGTCCCAATTCTGGTACCAAAGGGCTAAAAAGCTTTGGCTTAGGGAGGGAGATGAAAACTCCTCCTTCTTTCATAGAATTTGCTCATCAAGACAAAAGAGAAGTTTCATTCATGAAATCCAGGATGAAGAAGGTTTGATTCAGAATACAAACATCAGTATATCAACTGCTTTTATAAAATTCTTTTCAAAGATTTATAGAAGCTCTACAAAAAGTGATCCTCTTTTTATAGATAATCTAGATTGGAATCCGATAGAGCATTCTGAGTGGTCGCACCTTTGTGCCCCTTTTTTGGAAGATGAGATTAAAGGGGTTATAAACTCTTTAGATGGAAAAAAGACTCCTGGTCTAGACGGCTTCCCTATCTCCTTCTTTAAAACTTACTGGTATCTTCTAAAAGAGGATATCTTGGACATATTCAAGGATTTTTATGACAAAGGTGTTATCAACAAGAATATGAATAACACCTACATTGCTTTGATCCCAAAAAAGAAGGATTATTCTCATCCCAAAGACTTCAGACCAATCAGCCTAACAACGTCCATCTATAAGATCATTGCCAAAACTCTTTCAAACAGGTTAAAAACCACCCTTCCTGACACCATCTCAGGAAACCAGCTAGCTTTTGTCAAGAATCGCCAAATTACTGATGCTATCCTAATGGCAAATGAAGCTGTGGATTTTTGGAAGGTGAAGAAGATAAAGGGCTTTATTTTGAAGCTTGACATTGAAAAGGCTTTTGACAAGTTAAATTGGGATTTCATCGATTTTGTCCTGGAGAAAAAGAATTTTCCAATCCTTTGGAGAAAGTGGATAAGAGGATGTATAAGCAATGTCACTTACTCTGTTATTGTCAACGGAAGACCTCAAGGTCGTATTAAAGCTAACAGAGGTCTTAGACAAGGTGATCCCCTTTCCCCTTTTCTATTTGTTATTGCCATGGATTACCTTAGTCGTCTCTTATCACATCTGGAAAGTTCTGGTGCAATTAAAGGGGTATCTCTCAACAGTAATTGCAACATCTCTCACATCCTTTTCGCTGATGATATTCTTCTTTTCATAGAAGATAATGATTATTTTCTGAATAACCTTAGAATGGCTTTATCTCTGTTCGAAAGAGCTTCGAGTCTCAAAATAAACTTATTGAAATCAGCTCTGGTGCCAATGAATGTGTCCGTGAATAGAGCTAAAGAATGTGCTTCGATTTGGGGTATTCCTTGCCACTCTCTCCCCCTCTCCTACTTGGGAGTTCCTCTTGGTGGCAATCCAAAATCCAACCTTTTTTGGCGCAACGTTGAAGATAAGATCCAAAAAAAGCTCAATAATTGGAAATATGCTCAGATATCAAAAGGTGGAAGACTCACTTTAATCAAGTCTACCCTTAGCAGTCTTCCTATTTATCAACTATCTGTTTTCCAAGCTCCTTCCATGACGTGCAAAAACATTGAAAAATCCTGGAGAAAGTTCCTTTGGAAAGGTAATAACGGATCTGTAGGATCCCACCTAATCAACTGGACTAAAGTCTCTAAATCTAAAGAGGAGGGTGGGCTGGGTACCTCAAGGCTTCATGTGACAAATAAAGCCCTCTTAACTAAGTGGCTCTGGCGTTATCTCTCGGAACCTAATGCCCTTTGGAGGAGACTGATTCAATGCAAATATAAAGGCAACTATCCAGGAGACATTCCATCAAACATCTCCTCTATTACTTCTAAAGCCCCGTGGAGATCTATCATTGACAACATTGATTGGTTCAAAAGTAATCAAAGTTGGGAACTGAATAATGGAGATCAAATCTCCTTTTGGTATTCTAATTGGTCTCTAGAAGGTCGTCTCTCAACTGCCTATCCTAGACTTTTTGCTCTTACTCTTGACAAAGAAATCTCAGTTAAAGATGCGTGGAACACATTCGATAACCGATGA

Coding sequence (CDS)

ATGGCGGCTCCTTTCATTATACTAAATTCACCTGAATTCACCCACTGTATTAACTACAAATCCAGCCTTTTACTTGCTGTTAAAAGGTCACTTTCATCTCCAGTTCTTTTCACTGCTTTTCACCTTCCTTCCTTGGTTTTTCCTACAATCTCCCAAACAATGGCCTACTTCAAATCACTTCCTAGATCATGTAAGGTTGAAAGAAAGGAATTTGTCCTTCACCTTGACAAATATTCAAAGCACACTCATTATTGGTTAACAGAAACTGGAGCTCATAAGGCTTTCTCCATTGAAGTTTCCCCAAAAGACTTGGACTGGATAAGATGTACTCTGAAATCCTTGATCGCAACCCCAAATACAAACCGATTCTTCCTTGAGACCCGTGACTCTGAGCAATGCATCTGGATCAGGAAAACAAGAAATAGTAAAGGATGTACTGCAGAAATTTTTAGAGTTGATCAAAAAAACAGAAAATCATGTATCCTAGTTCCGGAAGGACCTGAGAAAAGTGGCTGGGTCTCCTTCCTATCCATGATTACCCCAAAAGTAGAAGTGAAAGCAAAAACAAGACCAACTTTTTTGCCAAGGTCCAGTCCTGACGGTCGTCTTTCTCCTCCCATTGACTACCACAAGCGATCATACGCAAGAGCTGTCACAGAAGGAAGAGCTACAAGTGACTCAAGTGACTCTTATGATACAAGCGATTCGAGTCATTCATCAGGTAATAGTTTTTGTGACTCTCCCTCATCTGATCTTCTTGAAAATACAGTGGTGATAGTTAGACGATTCTTTCATGATGACTGGCACAAAATCCTTCAAAACCTGAGAAAACAAACAGAGGAATCTTTCACTTATAATGCTTTCCATGCTGAAAAAGCTTTAGTTCATTTTAGCTCAAACATACCTGCAAACCTTCTCTGCCAGAACAAAGGATGGACCACGGTAGGAAAGTACTCGGTAAAATTTGAAAAATGGTCCTCTGCGTATCACGCCACTCCAAAACTTATTCCTAGTTATGGAGGATGGACAACTTTCAGAGGAATTCCACTACACTTGTGGAATATGACGACTTTTCAACAACTTGGAAAAGCCTGCGGAGGTTTGATTAAAGTGGCTGAGGAAACAAGATCAGCAAAAAACCTGGTAAAAGCAAGGATAAAGGTTAGATACAATTACTCAGGCTTCTTACCAGCAAATGTAAGGATTTTTGATAATGAGGGAAACAAATTTTCCATCCAAGTAGTTACTCACCCAGAAGGCAAATGGTTAATAGAAAGGAATGTCAGATTACATGGCACCTTCAAGAGACAAGCTGCAGCCGCCTTTGATGAATTCAATCCTGAATCAGAGCAATTCTTCTTCGAAGGAATGGAGGCCATATCGCCGGACTTCCTTTCCACTAGCTCCGACGGCCGTAAAAGCAACACACCGGATCAGCCACCTGCATTAAAATCTGTTATCATTAAATCTGACAGAGTTGCCACGTCGCCAAGCTTCTTAAATGAAGAGGTAGTTAATGATAGTAATTTGCATGCAACGGCTAACAAATCCAAATCAGAGATATTACCTGGGATATCAAATGATGGCGTGTTGGACAAAGGAAAACAGAAGGTTGACATTCAGCTTCAACCCAATTCAGCATTAAATTTGGATAAATCCAAAAGGAAAGTCTCCTTCAACTCTCCCTGTAATAAAACCAACATCTTCAATCCGGATTCTGCTCCAGCCAATCATTCTCCATCATTAAGTTCCCCTGAAAAAAAACAGAAAGTAAGTAGAGAGAGAAACCACCACAGCTCTGATAATGCAGAAGTTATTGATATAACAAACACTGAAGTGGTTCCTGAGACACCTGAAATGAAAATGCAAGTTAATGAGAATTCAAATTCTTCTTCTGAAGCCAACTACAGGAAACCAAAACATGTTCATAAAAGAAAATACTACTACAGGAAAAAAGAAGAAAAGGAGAAGGATCCGGACTCAAAGGCCTTCAAAAAACAACTTGCTTCCTGGTTGAAGGAAAATGGTCTGAAAATCTCTACGGTCACTGACTCTTCAGGGGCAACTACTTCAACAAATGTTTTGATAAATCAATTGAATTCTGGGTTAGCTTCAAAGGGGATAGGGGCTTTGGGGACATCTATTCTCCAGAATGTTGAACAATTTCATCACCAACAATCTTCTGATAGATCCTCCCTCATAAACAATAGATTCACTTGGTCAAACTTACGGAATCCTCCTACTTTTTCCAGAATTGATAGATTCCTTTACAACTCAACTTGGGAAAATCTCTTCAGTCCCCACACAACAAGGACCCTTCCTAGATCTACTTCAGATCACTTTCCTCTGGTCTGTGAAAACTCCAACACCAAGCTTAGTTGGGGTCCTGTCCCATTCCGTTTAAACTCCATAGCTCTCAGTGACCCAGAATTCAAAAGAAACATGGGAAGATGGTGGGAAAACTCGATCCAAGATGGTCATCCAGGTTTCTCCTTCATCCAAAGGCTAAAGTCTTTAGCAAATTTTATCAAACCTTGGCAAAAGGAGAAATTACACTCTCTCACCCATGCTAAAGATAGCATTTTAAGGGAAGTGGACTCTATTGACAAAAAGGAATTGGATACTCCTTTGACTCAAGAGGAAAGTAATCGTCGTCTAGCCCTAAAAGCTGATCTCAGCGAGCTATCTCTCAAGGAGTCCCAATTCTGGTACCAAAGGGCTAAAAAGCTTTGGCTTAGGGAGGGAGATGAAAACTCCTCCTTCTTTCATAGAATTTGCTCATCAAGACAAAAGAGAAGTTTCATTCATGAAATCCAGGATGAAGAAGGTTTGATTCAGAATACAAACATCAGTATATCAACTGCTTTTATAAAATTCTTTTCAAAGATTTATAGAAGCTCTACAAAAAGTGATCCTCTTTTTATAGATAATCTAGATTGGAATCCGATAGAGCATTCTGAGTGGTCGCACCTTTGTGCCCCTTTTTTGGAAGATGAGATTAAAGGGGTTATAAACTCTTTAGATGGAAAAAAGACTCCTGGTCTAGACGGCTTCCCTATCTCCTTCTTTAAAACTTACTGGTATCTTCTAAAAGAGGATATCTTGGACATATTCAAGGATTTTTATGACAAAGGTGTTATCAACAAGAATATGAATAACACCTACATTGCTTTGATCCCAAAAAAGAAGGATTATTCTCATCCCAAAGACTTCAGACCAATCAGCCTAACAACGTCCATCTATAAGATCATTGCCAAAACTCTTTCAAACAGGTTAAAAACCACCCTTCCTGACACCATCTCAGGAAACCAGCTAGCTTTTGTCAAGAATCGCCAAATTACTGATGCTATCCTAATGGCAAATGAAGCTGTGGATTTTTGGAAGGTGAAGAAGATAAAGGGCTTTATTTTGAAGCTTGACATTGAAAAGGCTTTTGACAAGTTAAATTGGGATTTCATCGATTTTGTCCTGGAGAAAAAGAATTTTCCAATCCTTTGGAGAAAGTGGATAAGAGGATGTATAAGCAATGTCACTTACTCTGTTATTGTCAACGGAAGACCTCAAGGTCGTATTAAAGCTAACAGAGGTCTTAGACAAGGTGATCCCCTTTCCCCTTTTCTATTTGTTATTGCCATGGATTACCTTAGTCGTCTCTTATCACATCTGGAAAGTTCTGGTGCAATTAAAGGGGTATCTCTCAACAGTAATTGCAACATCTCTCACATCCTTTTCGCTGATGATATTCTTCTTTTCATAGAAGATAATGATTATTTTCTGAATAACCTTAGAATGGCTTTATCTCTGTTCGAAAGAGCTTCGAGTCTCAAAATAAACTTATTGAAATCAGCTCTGGTGCCAATGAATGTGTCCGTGAATAGAGCTAAAGAATGTGCTTCGATTTGGGGTATTCCTTGCCACTCTCTCCCCCTCTCCTACTTGGGAGTTCCTCTTGGTGGCAATCCAAAATCCAACCTTTTTTGGCGCAACGTTGAAGATAAGATCCAAAAAAAGCTCAATAATTGGAAATATGCTCAGATATCAAAAGGTGGAAGACTCACTTTAATCAAGTCTACCCTTAGCAGTCTTCCTATTTATCAACTATCTGTTTTCCAAGCTCCTTCCATGACGTGCAAAAACATTGAAAAATCCTGGAGAAAGTTCCTTTGGAAAGGTAATAACGGATCTGTAGGATCCCACCTAATCAACTGGACTAAAGTCTCTAAATCTAAAGAGGAGGGTGGGCTGGGTACCTCAAGGCTTCATGTGACAAATAAAGCCCTCTTAACTAAGTGGCTCTGGCGTTATCTCTCGGAACCTAATGCCCTTTGGAGGAGACTGATTCAATGCAAATATAAAGGCAACTATCCAGGAGACATTCCATCAAACATCTCCTCTATTACTTCTAAAGCCCCGTGGAGATCTATCATTGACAACATTGATTGGTTCAAAAGTAATCAAAGTTGGGAACTGAATAATGGAGATCAAATCTCCTTTTGGTATTCTAATTGGTCTCTAGAAGGTCGTCTCTCAACTGCCTATCCTAGACTTTTTGCTCTTACTCTTGACAAAGAAATCTCAGTTAAAGATGCGTGGAACACATTCGATAACCGATGA

Protein sequence

MAAPFIILNSPEFTHCINYKSSLLLAVKRSLSSPVLFTAFHLPSLVFPTISQTMAYFKSLPRSCKVERKEFVLHLDKYSKHTHYWLTETGAHKAFSIEVSPKDLDWIRCTLKSLIATPNTNRFFLETRDSEQCIWIRKTRNSKGCTAEIFRVDQKNRKSCILVPEGPEKSGWVSFLSMITPKVEVKAKTRPTFLPRSSPDGRLSPPIDYHKRSYARAVTEGRATSDSSDSYDTSDSSHSSGNSFCDSPSSDLLENTVVIVRRFFHDDWHKILQNLRKQTEESFTYNAFHAEKALVHFSSNIPANLLCQNKGWTTVGKYSVKFEKWSSAYHATPKLIPSYGGWTTFRGIPLHLWNMTTFQQLGKACGGLIKVAEETRSAKNLVKARIKVRYNYSGFLPANVRIFDNEGNKFSIQVVTHPEGKWLIERNVRLHGTFKRQAAAAFDEFNPESEQFFFEGMEAISPDFLSTSSDGRKSNTPDQPPALKSVIIKSDRVATSPSFLNEEVVNDSNLHATANKSKSEILPGISNDGVLDKGKQKVDIQLQPNSALNLDKSKRKVSFNSPCNKTNIFNPDSAPANHSPSLSSPEKKQKVSRERNHHSSDNAEVIDITNTEVVPETPEMKMQVNENSNSSSEANYRKPKHVHKRKYYYRKKEEKEKDPDSKAFKKQLASWLKENGLKISTVTDSSGATTSTNVLINQLNSGLASKGIGALGTSILQNVEQFHHQQSSDRSSLINNRFTWSNLRNPPTFSRIDRFLYNSTWENLFSPHTTRTLPRSTSDHFPLVCENSNTKLSWGPVPFRLNSIALSDPEFKRNMGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTHAKDSILREVDSIDKKELDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLREGDENSSFFHRICSSRQKRSFIHEIQDEEGLIQNTNISISTAFIKFFSKIYRSSTKSDPLFIDNLDWNPIEHSEWSHLCAPFLEDEIKGVINSLDGKKTPGLDGFPISFFKTYWYLLKEDILDIFKDFYDKGVINKNMNNTYIALIPKKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKTTLPDTISGNQLAFVKNRQITDAILMANEAVDFWKVKKIKGFILKLDIEKAFDKLNWDFIDFVLEKKNFPILWRKWIRGCISNVTYSVIVNGRPQGRIKANRGLRQGDPLSPFLFVIAMDYLSRLLSHLESSGAIKGVSLNSNCNISHILFADDILLFIEDNDYFLNNLRMALSLFERASSLKINLLKSALVPMNVSVNRAKECASIWGIPCHSLPLSYLGVPLGGNPKSNLFWRNVEDKIQKKLNNWKYAQISKGGRLTLIKSTLSSLPIYQLSVFQAPSMTCKNIEKSWRKFLWKGNNGSVGSHLINWTKVSKSKEEGGLGTSRLHVTNKALLTKWLWRYLSEPNALWRRLIQCKYKGNYPGDIPSNISSITSKAPWRSIIDNIDWFKSNQSWELNNGDQISFWYSNWSLEGRLSTAYPRLFALTLDKEISVKDAWNTFDNR

Homology

[Close]

BLAST of IVF0006653 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 199.5 bits (506), Expect = 2.7e-49
Identity = 186/760 (24.47%), Postives = 341/760 (44.87%), Query Frame = 0


Query: 748  TFSRIDRFLYNSTWENLFSPHTTRTLPRSTSDHFPL-VCENSNTKLSWGPVPFRLNSIAL 807
            TFS+ID  + + T  N +       +P   SDH  L +  N+N         ++LN+  L
Sbjct: 207  TFSKIDHIIGHKTGLNRYK--NIEIVPCILSDHHGLRLIFNNNINNGKPTFTWKLNNTLL 266

Query: 808  SDPEFKRNMGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTHAK-------- 867
            +D   K  + +  ++ ++      +      +L + +K + + KL +L+ +K        
Sbjct: 267  NDTLVKEGIKKEIKDFLEFNE---NEATTYPNLWDTMKAFLRGKLIALSASKKKRETAHT 326

Query: 868  DSILREVDSIDKKELDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLREGDEN 927
             S+   + +++KKE ++P  +      + L+ +++++  + +     + +  +  + ++ 
Sbjct: 327  SSLTTHLKALEKKEANSP-KRSRRQEIIKLRGEINQVETRRTIQRINQTRSWFFEKINKI 386

Query: 928  SSFFHRICSSRQKRSFIHEIQDEEGLIQNTNISISTAFIKFFSKIYRSSTKSDPL----- 987
                 R+    + +  I++I++E+G I      I      F+ ++Y  STK + L     
Sbjct: 387  DKPLARLTKGHRDKILINKIRNEKGDITTDPEEIQNTIRSFYKRLY--STKLENLDEMDK 446

Query: 988  FIDNLDWNPIEHSEWSHLCAPFLEDEIKGVINSLDGKKTPGLDGFPISFFKTYWYLLKED 1047
            F+D      +   +  HL +P    EI+ VINSL  KK+PG DGF   F++T+    KED
Sbjct: 447  FLDRYQVPKLNQDQVDHLNSPISPKEIEAVINSLPTKKSPGPDGFSAEFYQTF----KED 506

Query: 1048 ILDIFKDFYDKGVINKNMNNTY----IALIPK-KKDYSHPKDFRPISLTTSIYKIIAKTL 1107
            ++ I    + K  +   + N++    I LIPK +KD +  ++FRPISL     KI+ K L
Sbjct: 507  LIPILHKLFHKIEVEGTLPNSFYEATITLIPKPQKDPTKIENFRPISLMNIDAKILNKIL 566

Query: 1108 SNRLKTTLPDTISGNQLAFVKNRQITDAILMANEAVDFW-KVKKIKGFILKLDIEKAFDK 1167
            +NR++  +   I  +Q+ F+   Q    I  +   + +  K+K     I+ LD EKAFDK
Sbjct: 567  ANRIQEHIKAIIHPDQVGFIPGMQGWFNIRKSINVIHYINKLKDKNHMIISLDAEKAFDK 626

Query: 1168 LNWDFIDFVLEKKNFPILWRKWIRGCISNVTYSVIVNGRPQGRIKANRGLRQGDPLSPFL 1227
            +   F+  VLE+      +   I+   S    ++ VNG     I    G RQG PLSP+L
Sbjct: 627  IQHPFMIKVLERSGIQGPYLNMIKAIYSKPVANIKVNGEKLEAIPLKSGTRQGCPLSPYL 686

Query: 1228 FVIAMDYLSRLLSHLESSGAIKGVSLNSNCNISHILFADDILLFIEDNDYFLNNLRMALS 1287
            F I ++ L+R +   +    IKG+ +     +   L ADD++++I D       L   ++
Sbjct: 687  FNIVLEVLARAIRQQKE---IKGIQIGKE-EVKISLLADDMIVYISDPKNSTRELLNLIN 746

Query: 1288 LFERASSLKINLLKSALVPMNVSVNRAKECASIWGIPCHSLPLSYLGVPLGGNPKS--NL 1347
             F      KIN  KS       +    KE          +  + YLGV L    K   + 
Sbjct: 747  SFGEVVGYKINSNKSMAFLYTKNKQAEKEIRETTPFSIVTNNIKYLGVTLTKEVKDLYDK 806

Query: 1348 FWRNVEDKIQKKLNNWKYAQISKGGRLTLIKSTLSSLPIYQLSV--FQAPSMTCKNIEKS 1407
             +++++ +I++ L  WK    S  GR+ ++K  +    IY+ +    + P+     +E +
Sbjct: 807  NFKSLKKEIKEDLRRWKDLPCSWIGRINIVKMAILPKAIYRFNAIPIKIPTQFFNELEGA 866

Query: 1408 WRKFLWKGNNGSVGSHLINWTKVSKSKEEGGLGTSRLHVTNKALL--TKWLWRYLSEPNA 1467
              KF+W      +   L+   + S     GG+    L +  +A++  T W W Y      
Sbjct: 867  ICKFVWNNKKPRIAKSLLKDKRTS-----GGITMPDLKLYYRAIVIKTAWYW-YRDRQVD 926

Query: 1468 LWRRLIQCKYKGNYPGDIPSNISSITSKAPWRSIIDNIDW 1482
             W R+   +   +  G +  +  + T +    SI +N  W
Sbjct: 927  QWNRIEDPEMNPHTYGHLIFDKGAKTIQWKKDSIFNNWCW 944

[Close]

BLAST of IVF0006653 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.4e-48
Identity = 188/727 (25.86%), Postives = 325/727 (44.70%), Query Frame = 0


Query: 748  TFSRIDRFLYNSTWENLFSPHTTRTLPRSTSDHFPLVCENSNTKLSWG-PVPFRLNSIAL 807
            T+S+ID  + +     L     T  +    SDH  +  E     L+      ++LN++ L
Sbjct: 200  TYSKIDHIVGSKAL--LSKCKRTEIITNYLSDHSAIKLELRIKNLTQSRSTTWKLNNLLL 259

Query: 808  SD----PEFKRNMGRWWE------NSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTH 867
            +D     E K  +  ++E       + Q+    F  + R K +A  +  +++++  S   
Sbjct: 260  NDYWVHNEMKAEIKMFFETNENKDTTYQNLWDAFKAVCRGKFIA--LNAYKRKQERSKID 319

Query: 868  AKDSILREVDSIDKKELDTPLTQEESNRRLALKADLSELSLK---ESQFW-YQRAKKLWL 927
               S L+E++  ++        QE +  R  LK   ++ +L+   ES+ W ++R  K+  
Sbjct: 320  TLTSQLKELEKQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKI-- 379

Query: 928  REGDENSSFFHRICSSRQKRSFIHEIQDEEGLIQNTNISISTAFIKFFSKIYRS---STK 987
                       R+   +++++ I  I++++G I      I T   +++  +Y +   + +
Sbjct: 380  ------DRPLARLIKKKREKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLE 439

Query: 988  SDPLFIDNLDWNPIEHSEWSHLCAPFLEDEIKGVINSLDGKKTPGLDGFPISFFKTYWYL 1047
                F+D      +   E   L  P    EI  +INSL  KK+PG DGF   F++ Y   
Sbjct: 440  EMDTFLDTYTLPRLNQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEE 499

Query: 1048 LKEDILDIFKDFYDKGVINKNMNNTYIALIPKK-KDYSHPKDFRPISLTTSIYKIIAKTL 1107
            L   +L +F+    +G++  +     I LIPK  +D +  ++FRPISL     KI+ K L
Sbjct: 500  LVPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKIL 559

Query: 1108 SNRLKTTLPDTISGNQLAFVKNRQITDAILMANEAVDFWKVKKIKG-FILKLDIEKAFDK 1167
            +NR++  +   I  +Q+ F+   Q    I  +   +      K K   I+ +D EKAFDK
Sbjct: 560  ANRIQQHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQHINRAKDKNHVIISIDAEKAFDK 619

Query: 1168 LNWDFIDFVLEKKNFPILWRKWIRGCISNVTYSVIVNGRPQGRIKANRGLRQGDPLSPFL 1227
            +   F+   L K     ++ K IR      T ++I+NG+         G RQG PLSP L
Sbjct: 620  IQQPFMLKTLNKLGIDGMYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLL 679

Query: 1228 FVIAMDYLSRLLSHLESSGAIKGVSLNSNCNISHILFADDILLFIEDNDYFLNNLRMALS 1287
            F I ++ L+R    +     IKG+ L     +   LFADD+++++E+      NL   +S
Sbjct: 680  FNIVLEVLARA---IRQEKEIKGIQLGKE-EVKLSLFADDMIVYLENPIVSAQNLLKLIS 739

Query: 1288 LFERASSLKINLLKSALVPMNVSVNRAKECASIWGIP--CHSLPLSYLGVPLGGNPKSNL 1347
             F + S  KIN+ KS     N   NR  E   +  +P    S  + YLG+ L  + K +L
Sbjct: 740  NFSKVSGYKINVQKSQAFLYN--NNRQTESQIMGELPFTIASKRIKYLGIQLTRDVK-DL 799

Query: 1348 FWRNVE---DKIQKKLNNWKYAQISKGGRLTLIKSTLSSLPIYQLSV--FQAPSMTCKNI 1407
            F  N +    +I++  N WK    S  GR+ ++K  +    IY+ +    + P      +
Sbjct: 800  FKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPMTFFTEL 859

Query: 1408 EKSWRKFLWKGNNGSVGSHLINWTKVSKSKEEGGLGTSRLHVTNKALLTK--WLWRYLSE 1446
            EK+  KF+W      +   ++     S+  + GG+      +  KA +TK  W W Y + 
Sbjct: 860  EKTTLKFIWNQKRARIAKSIL-----SQKNKAGGITLPDFKLYYKATVTKTAWYW-YQNR 901

[Close]

BLAST of IVF0006653 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 3.7e-46
Identity = 206/800 (25.75%), Postives = 356/800 (44.50%), Query Frame = 0


Query: 681  TVTDSSGATTSTNVLINQLNSGLA---SKGIGALGTSILQNVEQFHHQQSSDRSSLIN-- 740
            T+TD S   +ST++++   N+ LA         L   IL       H   +D     +  
Sbjct: 127  TLTDMSNLISSTSIVVGDFNTPLAVLDRSSKKKLSKEILDLNSTIQHLDLTDIYRTFHPN 186

Query: 741  -NRFTWSNLRNPPTFSRIDRFLYNSTWENLFSPHTTRTLPRSTSDHFPLVCE-NSNTKLS 800
               +T+ +  +  T+S+ID  L + +  NL        +P   SDH  +  E N+N  L 
Sbjct: 187  KTEYTFFSSAH-GTYSKIDHILGHKS--NLSKFKKIEIIPCIFSDHHGIKVELNNNRNLH 246

Query: 801  WGPVPFRLNSIALSD----PEFKRNMGRWWE-NSIQDGH-----PGFSFIQRLK--SLAN 860
                 ++LN++ L D     E K+ + ++ E N+ QD +          + R K  +L  
Sbjct: 247  THTKTWKLNNLMLKDTWVIDEIKKEITKFLEQNNNQDTNYQNLWDTAKAVLRGKFIALQA 306

Query: 861  FIKPWQKEKLHSLTHAKDSILREVDSIDKKELDTPLTQEESNRR--LALKADLSELSLKE 920
            F+K  ++E++++L       +  +  ++K+E   P   + S R+    ++A+L+E+  K 
Sbjct: 307  FLKKTEREEVNNL-------MGHLKQLEKEEHSNP---KPSRRKEITKIRAELNEIENKR 366

Query: 921  SQFWYQRAKKLWLREGDENSSFFHRICSSRQKRSFIHEIQDEEGLIQNTNISISTAFIKF 980
                  ++K  +  + ++       +   ++ +S I  I++    I      I     ++
Sbjct: 367  IIQQINKSKSWFFEKINKIDKPLANLTRKKRVKSLISSIRNGNDEITTDPSEIQKILNEY 426

Query: 981  FSKIYR---SSTKSDPLFIDNLDWNPIEHSEWSHLCAPFLEDEIKGVINSLDGKKTPGLD 1040
            + K+Y     + K    +++      +   E   L  P    EI   I +L  KK+PG D
Sbjct: 427  YKKLYSHKYENLKEIDQYLEACHLPRLSQKEVEMLNRPISSSEIASTIQNLPKKKSPGPD 486

Query: 1041 GFPISFFKTYWYLLKEDILDIFKDFYDKGVINKNMNNTYIALIPKK-KDYSHPKDFRPIS 1100
            GF   F++T+   L   +L++F++   +G++        I LIPK  KD +  +++RPIS
Sbjct: 487  GFTSEFYQTFKEELVPILLNLFQNIEKEGILPNTFYEANITLIPKPGKDPTRKENYRPIS 546

Query: 1101 LTTSIYKIIAKTLSNRLKTTLPDTISGNQLAFVKNRQITDAILMA-NEAVDFWKVKKIKG 1160
            L     KI+ K L+NR++  +   I  +Q+ F+   Q    I  + N      K+K    
Sbjct: 547  LMNIDAKILNKILTNRIQQHIKKIIHHDQVGFIPGSQGWFNIRKSINVIQHINKLKNKDH 606

Query: 1161 FILKLDIEKAFDKLNWDFIDFVLEKKNFPILWRKWIRGCISNVTYSVIVNGRPQGRIKAN 1220
             IL +D EKAFD +   F+   L+K      + K I    S  T ++I+NG         
Sbjct: 607  MILSIDAEKAFDNIQHPFMIRTLKKIGIEGTFLKLIEAIYSKPTANIILNGVKLKSFPLR 666

Query: 1221 RGLRQGDPLSPFLFVIAMDYLSRLLSHLESSGAIKGVSLNSNCNISHILFADDILLFIED 1280
             G RQG PLSP LF I M+ L+     +    AIKG+ + S   I   LFADD+++++E+
Sbjct: 667  SGTRQGCPLSPLLFNIVMEVLA---IAIREEKAIKGIHIGSE-EIKLSLFADDMIVYLEN 726

Query: 1281 NDYFLNNLRMALSLFERASSLKINLLKSALVPMNVSVNRAKECASIWGIPCHSLP--LSY 1340
                   L   +  +   S  KIN  KS  V    + N   E      IP   +P  + Y
Sbjct: 727  TRDSTTKLLEVIKEYSNVSGYKINTHKS--VAFIYTNNNQAEKTVKDSIPFTVVPKKMKY 786

Query: 1341 LGVPLGGNPKSNLFWRNVE---DKIQKKLNNWKYAQISKGGRLTLIKSTLSSLPIYQLSV 1400
            LGV L  + K +L+  N E    +I + +N WK    S  GR+ ++K ++    IY  + 
Sbjct: 787  LGVYLTKDVK-DLYKENYETLRKEIAEDVNKWKNIPCSWLGRINIVKMSILPKAIYNFNA 846

Query: 1401 --FQAPSMTCKNIEKSWRKFLWKGNNGSVGSHLINWTKVSKSKEEG-GLGTSRLHVTNKA 1447
               +AP    K++EK    F+W      +   L++    +K+K  G  L   RL+  +  
Sbjct: 847  IPIKAPLSYFKDLEKIILHFIWNQKKPQIAKTLLS----NKNKAGGITLPDLRLYYKSIV 901

[Close]

BLAST of IVF0006653 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.2e-35
Identity = 171/719 (23.78%), Postives = 311/719 (43.25%), Query Frame = 0


Query: 750  SRIDRFLYNSTWENLFSPHTTRTLPRSTSDHFPLVCENSNTKLSWGPVPFRLNSIALSDP 809
            SRIDR   +S   +     T R  P   SDH  +    S          +  N+  L D 
Sbjct: 202  SRIDRIYISSHLMSRAQSSTIRLAP--FSDHNCVSLRMSIAPSLPKAAYWHFNNSLLEDE 261

Query: 810  EFKRNMGRWWE--NSIQDGHPGFSFIQRLKSLAN-FIKPWQKEKLHSLTHAKDSILREVD 869
             F +++   W    + QD    F+ + +   +    +K   +E   S++  +++   E++
Sbjct: 262  GFAKSVRDTWRGWRAFQD---EFATLNQWWDVGKVHLKLLCQEYTKSVSGQRNA---EIE 321

Query: 870  SIDKKELDTPLTQEESNRR------LALKADLSELSLKESQFWYQRAKKLWLREGDENSS 929
            +++ + LD       S  +      L  K  L  +  ++++  + R++   L + D  S 
Sbjct: 322  ALNGEVLDLEQRLSGSEDQALQCEYLERKEALRNMEQRQARGAFVRSRMQLLCDMDRGSR 381

Query: 930  FFHRICSSRQKRSFIHEIQDEEGLIQNTNISISTAFIKFFSKIYRSSTKSDPLFIDNLDW 989
            FF+ +   +  R  I  +  E+G       +I      F+  ++     S     +  D 
Sbjct: 382  FFYALEKKKGNRKQITCLFAEDGTPLEDPEAIRDRARSFYQNLFSPDPISPDACEELWDG 441

Query: 990  NP-IEHSEWSHLCAPFLEDEIKGVINSLDGKKTPGLDGFPISFFKTYWYLLKEDILDIFK 1049
             P +       L  P   DE+   +  +   K+PGLDG  I FF+ +W  L  D   +  
Sbjct: 442  LPVVSERRKERLETPITLDELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLT 501

Query: 1050 DFYDKGVINKNMNNTYIALIPKKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKTTLPDT 1109
            + + KG +  +     ++L+PKK D    K++RP+SL ++ YKI+AK +S RLK+ L + 
Sbjct: 502  EAFKKGELPLSCRRAVLSLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEV 561

Query: 1110 ISGNQLAFVKNRQITDAILMANEAVDFWKVKKIKGFILKLDIEKAFDKLNWDFIDFVLEK 1169
            I  +Q   V  R I D + +  + + F +   +    L LD EKAFD+++  ++   L+ 
Sbjct: 562  IHPDQSYTVPGRTIFDNVFLIRDLLHFARRTGLSLAFLSLDQEKAFDRVDHQYLIGTLQA 621

Query: 1170 KNFPILWRKWIRGCISNVTYSVIVNGRPQGRIKANRGLRQGDPLSPFLFVIAMDYLSRLL 1229
             +F   +  +++   ++    V +N      +   RG+RQG PLS  L+ +A++    LL
Sbjct: 622  YSFGPQFVGYLKTMYASAECLVKINWSLTAPLAFGRGVRQGCPLSGQLYSLAIEPFLCLL 681

Query: 1230 SHLESSGAIKGVSLNSNCNISHILFADDILLFIEDNDYFLNNLRMALSLFERASSLKINL 1289
                +   +K      +  +    +ADD++L  +D    L   +    ++  ASS +IN 
Sbjct: 682  RKRLTGLVLK----EPDMRVVLSAYADDVILVAQDL-VDLERAQECQEVYAAASSARINW 741

Query: 1290 LKSA-LVPMNVSVNRAKECASIWGIPCHSLPLSYLGVPLGGN--PKSNLFWRNVEDKIQK 1349
             KS+ L+  ++ V+      +   I   S  + YLGV L     P S  F   +E+ +  
Sbjct: 742  SKSSGLLEGSLKVDFLP--PAFRDISWESKIIKYLGVYLSAEEYPVSQNF-IELEECVLT 801

Query: 1350 KLNNWK-YAQI-SKGGRLTLIKSTLSSLPIYQLSVFQAPSMTCKNIEKSWRKFLWKGNNG 1409
            +L  WK +A++ S  GR  +I   ++S   Y+L            I++    FLW     
Sbjct: 802  RLGKWKGFAKVLSMRGRALVINQLVASQIWYRLICLSPTQEFIAKIQRRLLDFLW----- 861

Query: 1410 SVGSHLINWTKVSKSKEEGGLGTSRLHVTNKALLTKWLWRYL-SEPNALWRRLIQCKYK 1453
             +G H ++    S   +EGG G   +         + + RYL ++P+  W  L    Y+
Sbjct: 862  -IGKHWVSAGVSSLPLKEGGQGVVCIRSQVHTFRLQQIQRYLYADPSPQWCTLASSFYR 898

[Close]

BLAST of IVF0006653 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.8e-22
Identity = 57/173 (32.95%), Postives = 86/173 (49.71%), Query Frame = 0


Query: 1332 DKIQKKLNNWKYAQISKGGRLTLIKSTLSSLPIYQLSVFQAPSMTCKNIEKSWRKFLWKG 1391
            +++  +++ W+   +S  GRLTL K+ LSS+P++ +S    P      +++  R FLW  
Sbjct: 18   ERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRTFLWGS 77

Query: 1392 NNGSVGSHLINWTKVSKSKEEGGLGTSRLHVTNKALLTKWLWRYLSEPNALWRRLIQCKY 1451
                   HL+ W+KV   K+EGGLG       N+AL++K  WR L E N+LW  ++Q KY
Sbjct: 78   TAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQKKY 137

Query: 1452 KGNYPGDIPSNISSITSKAPWRSIIDNI-DWFKSNQSWELNNGDQISFWYSNW 1504
                  D    I   +  + WRSI   + D       W   +G QI FW   W
Sbjct: 138  HVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRW 190

[Close]

BLAST of IVF0006653 vs. ExPASy TrEMBL
Match: A0A5D3BLV7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005290 PE=4 SV=1)

HSP 1 Score: 2552.7 bits (6615), Expect = 0.0e+00
Identity = 1321/1687 (78.30%), Postives = 1378/1687 (81.68%), Query Frame = 0


Query: 21   SSLLLAVKRSLSSPVLFTAFHLPSLVFPTISQTMAYFKSLPRSCKVERKEFVLHLDKYSK 80
            + LLL VKRSLS PVLF AFHLPSL F        +FKSLPRSCKVERKEFVLHLDKYSK
Sbjct: 22   TDLLLVVKRSLSPPVLFIAFHLPSLAFSYNLPNNGHFKSLPRSCKVERKEFVLHLDKYSK 81

Query: 81   HTHYWLTETGAHKAFSIEVSPKDLDWIRCTLKSLIATPNTNRFFLETRDSEQCIWIRKTR 140
            HTHYWLTETGAHKAFSIEVSP+DLDWIRCTLKSLIATPNTNRFFLETRDSEQ IWIRKTR
Sbjct: 82   HTHYWLTETGAHKAFSIEVSPRDLDWIRCTLKSLIATPNTNRFFLETRDSEQRIWIRKTR 141

Query: 141  NSKGCTAEIFRVDQKNRKSCILVPEGPEKSGWVSFLSMITPKVEVKAKTRPTFLPRSSPD 200
            NSKGCTAEIFRVDQKNRKSCILVPEGP+KSGWVSFLSMITPKVEVKAKTRPTFLPR+SPD
Sbjct: 142  NSKGCTAEIFRVDQKNRKSCILVPEGPDKSGWVSFLSMITPKVEVKAKTRPTFLPRTSPD 201

Query: 201  GRLSPPIDYHKRSYARAVTEGR--ATSDSSDSYDTSDSSHSSGNSFCDSPSSDLLENTVV 260
             RLSPPIDYHKRSYA+AVTEGR  ATSDSSDSYD+SDSSHSS NSFCDSPSSDLLENTVV
Sbjct: 202  CRLSPPIDYHKRSYAKAVTEGRPFATSDSSDSYDSSDSSHSSSNSFCDSPSSDLLENTVV 261

Query: 261  IVRRFFHDDWHKILQNLRKQTEESFTYNAFHAEKALVHFSSNIPANLLCQNKGWTTVGKY 320
            IVRRFFHDDWHKILQNLRKQTEESFTYNAFHAEKALVHFSSNIPANLLCQNKGW+TVGKY
Sbjct: 262  IVRRFFHDDWHKILQNLRKQTEESFTYNAFHAEKALVHFSSNIPANLLCQNKGWSTVGKY 321

Query: 321  SVKFEKWSSAYHATPKLIPSYGGWTTFRGIPLHLWNMTTFQQLGKACGGLIKVAEETRSA 380
            SV+FEKWS  YHATPKLIPSYGGWTTFRGIPLHLWNM TFQQ+GKAC GLIKVAEETRSA
Sbjct: 322  SVRFEKWSPVYHATPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACEGLIKVAEETRSA 381

Query: 381  KNLVKARIKVRYNYSGFLPANVRIFDNEGNKFSIQVVTHPEGKWLIERNVRLHGTFKRQA 440
            KNL++ARIKVRYNYSGFLPANVRIFDNEGNKF +QVVTHPEGKWLIERNVRLHGTFKRQA
Sbjct: 382  KNLIEARIKVRYNYSGFLPANVRIFDNEGNKFFVQVVTHPEGKWLIERNVRLHGTFKRQA 441

Query: 441  AAAFDEFNPESEQFFFEGMEAISPDFLSTSSDGRKSNTPDQPPALKSVIIKSDRVATSPS 500
            AA+FD+FNPESEQFFFEG EAISPDFLSTSSDGRKS+TPDQP ALKSVIIK DR AT PS
Sbjct: 442  AASFDDFNPESEQFFFEGSEAISPDFLSTSSDGRKSSTPDQPSALKSVIIKPDRNATLPS 501

Query: 501  FLNEEVVNDSNLHATANKSKSEILPGISNDGVLDKGKQKVDIQLQPNSALNLDKSKRKVS 560
            FLNEE+VNDSNLHATANKSK EIL GISNDGVLDKGKQKVDIQLQPNSALNLDKSKRKVS
Sbjct: 502  FLNEELVNDSNLHATANKSKLEILSGISNDGVLDKGKQKVDIQLQPNSALNLDKSKRKVS 561

Query: 561  FNSPCNKTNIFNPDSAPANHSPSLSSPEKKQKVSRER----------------------- 620
            FNSP NKTNIFNPDSAPANHSPSL+SPEKKQKVSRER                       
Sbjct: 562  FNSPSNKTNIFNPDSAPANHSPSLNSPEKKQKVSRERSIKKKSSSTQPNSKANQNKGVFI 621

Query: 621  -------------------------------------NHHSSDNAEVIDITNTEVVPETP 680
                                                 +HH+SDNAEV+DITNTEVVPETP
Sbjct: 622  TQPIQIVAHDRDAAKKGLSLTVDLGDLPALDPNKSLEDHHNSDNAEVVDITNTEVVPETP 681

Query: 681  EMKMQVNENSNSSSEANYRKPKHVHKRKYYYRKKEEKEKDPDSKAFKKQLASWLKENGLK 740
            EMKM VNENSNSSSEANYRKPKHVHKRKYYYRKKEEKEKDPDS+AFKKQL SWLK+NGLK
Sbjct: 682  EMKMPVNENSNSSSEANYRKPKHVHKRKYYYRKKEEKEKDPDSEAFKKQLVSWLKKNGLK 741

Query: 741  ISTVTDSSGATTSTNVLINQLNSGL----------------------------------- 800
            +ST TDSSGATTSTNVL+NQ+NSGL                                   
Sbjct: 742  LSTDTDSSGATTSTNVLLNQMNSGLKITNKRIIKSLWPSNSINWIAKNASGSSGGILILW 801

Query: 801  ---------ASKGIGALGTSILQNVE----------------------QFHHQQ------ 860
                       +G+ +L  + L N                        + H+ Q      
Sbjct: 802  DAQNHSLLSQEEGLFSLSANFLLNNNSSWWLTGLYGPVKRRERIHFWAELHNLQHLNSFP 861

Query: 861  --------------------SSDRSS----------------LINNRFTWSNLRNPPTFS 920
                                SS  +S                L NNRFTWSNLRNPPTFS
Sbjct: 862  WILGGDLNVIRMREESTSVLSSSHNSRMLNNFISNNLLIDPPLTNNRFTWSNLRNPPTFS 921

Query: 921  RIDRFLYNSTWENLFSPHTTRTLPRSTSDHFPLVCENSNTKLSWGPVPFRLNSIALSDPE 980
            RIDRFLYNS+WENLFSPHTTRTLPRSTSDHFPLVCE+SN KLSWGP+PFRLNSI LSDPE
Sbjct: 922  RIDRFLYNSSWENLFSPHTTRTLPRSTSDHFPLVCEDSNPKLSWGPIPFRLNSITLSDPE 981

Query: 981  FKRNMGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTHAKDSILREVDSIDK 1040
            FKRNMGRWWENSIQ G+PGFSFIQRLKSLANFIKPWQKEKLHSLT+AK++I+REVDSIDK
Sbjct: 982  FKRNMGRWWENSIQAGYPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKEAIIREVDSIDK 1041

Query: 1041 KELDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLREGDENSSFFHRICSSRQ 1100
            KELDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLREGDENSSFFHRICSSRQ
Sbjct: 1042 KELDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLREGDENSSFFHRICSSRQ 1101

Query: 1101 KRSFIHEIQDEEGLIQNTNISISTAFIKFFSKIYRSSTKSDPLFIDNLDWNPIEHSEWSH 1160
            KRSFIHEIQDEEG IQNTN SISTAFIKFFS+IYRSSTKSDPLFI+NLDWNPI  SEWSH
Sbjct: 1102 KRSFIHEIQDEEGSIQNTNNSISTAFIKFFSRIYRSSTKSDPLFIENLDWNPIASSEWSH 1161

Query: 1161 LCAPFLEDEIKGVINSLDGKKTPGLDGFPISFFKTYWYLLKEDILDIFKDFYDKGVINKN 1220
            LCAPFLE EIKGVINS DGKKTPG DGFPISFFK++W                       
Sbjct: 1162 LCAPFLEGEIKGVINSFDGKKTPGPDGFPISFFKSHW----------------------- 1221

Query: 1221 MNNTYIALIPKKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKTTLPDTISGNQLAFVKN 1280
                                                     LKTTLP+TISGNQLAFVKN
Sbjct: 1222 -----------------------------------------LKTTLPNTISGNQLAFVKN 1281

Query: 1281 RQITDAILMANEAVDFWKVKKIKGFILKLDIEKAFDKLNWDFIDFVLEKKNFPILWRKWI 1340
            RQITDAILMANEAVD+WKVKKIKGFILKLDIEKAFD LN DFID VLEKKNFP  WRKWI
Sbjct: 1282 RQITDAILMANEAVDYWKVKKIKGFILKLDIEKAFDNLNLDFIDNVLEKKNFPNPWRKWI 1341

Query: 1341 RGCISNVTYSVIVNGRPQGRIKANRGLRQGDPLSPFLFVIAMDYLSRLLSHLESSGAIKG 1400
            RGCISNVTYSVI+NGRPQGRIKANRGLRQGDPLSPFLFVIAMDYLSRLLSHLESSGAIKG
Sbjct: 1342 RGCISNVTYSVIINGRPQGRIKANRGLRQGDPLSPFLFVIAMDYLSRLLSHLESSGAIKG 1401

Query: 1401 VSLNSNCNISHILFADDILLFIEDNDYFLNNLRMALSLFERASSLKINLLKSALVPMNVS 1460
            VSLN NCNISHILFADDILLFIEDND FL NLRMALSLFERAS LKINLLKSALVP+NVS
Sbjct: 1402 VSLNGNCNISHILFADDILLFIEDNDCFLKNLRMALSLFERASGLKINLLKSALVPVNVS 1461

Query: 1461 VNRAKECASIWGIPCHSLPLSYLGVPLGGNPKSNLFWRNVEDKIQKKLNNWKYAQISKGG 1520
            + RAKECAS WGI CHSLPLSYLGVPLGGNPKSNLFWRNVEDKIQKKLNNWKYAQISKGG
Sbjct: 1462 LKRAKECASFWGISCHSLPLSYLGVPLGGNPKSNLFWRNVEDKIQKKLNNWKYAQISKGG 1521

Query: 1521 RLTLIKSTLSSLPIYQLSVFQAPSMTCKNIEKSWRKFLWKGNNGSVGSHLINWTKVSKSK 1538
            RLTLIKSTLSSLPIYQLSVFQAPS+TCKNIEK WRKFLWKGNNGS GSHLINWTKVSKSK
Sbjct: 1522 RLTLIKSTLSSLPIYQLSVFQAPSLTCKNIEKLWRKFLWKGNNGSEGSHLINWTKVSKSK 1581

[Close]

BLAST of IVF0006653 vs. ExPASy TrEMBL
Match: A0A5D3BL61 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001020 PE=4 SV=1)

HSP 1 Score: 2205.6 bits (5714), Expect = 0.0e+00
Identity = 1132/1625 (69.66%), Postives = 1257/1625 (77.35%), Query Frame = 0


Query: 54   MAYFKSLPRSCKVERKEFVLHLDKYSKHTHYWLTETGAHKAFSIEVSPKDLDWIRCTLKS 113
            MAYFKSLPRSCK+ERKEFVL LDKY+KHTHYWLTETGAHKAFSIEVSP+DLDWIR TLKS
Sbjct: 1    MAYFKSLPRSCKIERKEFVLLLDKYAKHTHYWLTETGAHKAFSIEVSPRDLDWIRSTLKS 60

Query: 114  LIATPNTNRFFLETRDSEQCIWIRKTRNSKGCTAEIFRVDQKNRKSCILVPEGPEKSGWV 173
            LI TP++NRFFLE RD E CIWIRKTRN KGCTAEIFRVD KNRKSCILVPEG EKS WV
Sbjct: 61   LIETPSSNRFFLENRDYEHCIWIRKTRNGKGCTAEIFRVDHKNRKSCILVPEGLEKSCWV 120

Query: 174  SFLSMITPKVEVKAKTRPTFLPRSSPDGRLSPPIDYHKRSYARAVTEGRA--TSDSSDSY 233
            SFLSMITPKVEVKAKTRP FLPRSSP+ RLSPPIDYHKRSYA+AV+EGR+  +SDSSDSY
Sbjct: 121  SFLSMITPKVEVKAKTRPIFLPRSSPEFRLSPPIDYHKRSYAKAVSEGRSSISSDSSDSY 180

Query: 234  DTSDSSHSSGNSFCDSPSSDLLENTVVIVRRFFHDDWHKILQNLRKQTEESFTYNAFHAE 293
             +SDSS SSGNS CDSP   LLENTVV+VRRFFHDDW KILQNLRKQTEESFTYNAFHAE
Sbjct: 181  ASSDSSQSSGNSPCDSPFPVLLENTVVLVRRFFHDDWQKILQNLRKQTEESFTYNAFHAE 240

Query: 294  KALVHFSSNIPANLLCQNKGWTTVGKYSVKFEKWSSAYHATPKLIPSYGGWTTFRGIPLH 353
            K LVHF+SN+PANLLCQNKGWTTVGKY+V+FEKW+ A HA+PKLIPSYGGWTTFRGIPLH
Sbjct: 241  KVLVHFNSNVPANLLCQNKGWTTVGKYTVRFEKWAPASHASPKLIPSYGGWTTFRGIPLH 300

Query: 354  LWNMTTFQQLGKACGGLIKVAEETRSAKNLVKARIKVRYNYSGFLPANVRIFDNEGNKFS 413
            LWNM TFQQ+GKACGGLIKVAEET++A+NL++A++K+RYNYSGFLPA V+IFD EGNKF 
Sbjct: 301  LWNMMTFQQIGKACGGLIKVAEETKTARNLIEAKLKIRYNYSGFLPAYVKIFDQEGNKFV 360

Query: 414  IQVVTHPEGKWLIERNVRLHGTFKRQAAAAFDEFNPESEQFFFEGMEAISPDFLSTSSDG 473
            +QVVTH EGKWL+ERNVRLHGTFKRQAAA+FD+FNP+SEQF F+G+EAISPD L+T S  
Sbjct: 361  VQVVTHSEGKWLMERNVRLHGTFKRQAAASFDDFNPDSEQFLFDGLEAISPDLLNTISGS 420

Query: 474  RKSNTPDQPPALKSVIIKSDRVATSPSFLNEEVVNDSNLHATANKSKSEILPGISNDGVL 533
            RKS +P+QP ALKSVIIK  + ATSP+ LNEEVVND++LHATANKSK +IL GISNDG L
Sbjct: 421  RKSISPEQPSALKSVIIKPAKYATSPTTLNEEVVNDNSLHATANKSKLKILSGISNDGSL 480

Query: 534  DKGKQKVDIQLQPNSALNLDKSKRKVSFNSPCNKTNIFNPDSAPANHSPSLSSPEKKQKV 593
            DKGKQKVDI  Q  SA    K KRKVSFNSP NKT  FNPDSAPANH     SPEKK++V
Sbjct: 481  DKGKQKVDIPSQLTSAFIFYKPKRKVSFNSPSNKTTFFNPDSAPANH-----SPEKKKRV 540

Query: 594  SRER-------------------------------------------------------- 653
            SRER                                                        
Sbjct: 541  SRERSVKKKSSTIQPKLRANQGKGNLITQPLQVVAHDLDASKKGLSLTVDLGNLPVLDPS 600

Query: 654  ----NHHSSDNAEVIDITNTEVVPETPEMKMQVNENSNSSSEANYRKPKHVHKRKYYYRK 713
                +HHSSDNAEVIDITNTEVVPETPE+KM   E SNSS E NYRK KH H+R++YYRK
Sbjct: 601  KSFEDHHSSDNAEVIDITNTEVVPETPELKMTDPEKSNSSPEVNYRKQKHSHRRRHYYRK 660

Query: 714  KEEKEKDPDSKAFKKQLASWLKENGLKISTVTDSSGATTSTNVLINQLNS---------- 773
            KE+KEKD +S+AFK QL +WLKENGLK+S  TDSSGATTSTN L +QL S          
Sbjct: 661  KEDKEKDTNSEAFKNQLVTWLKENGLKLSIDTDSSGATTSTNALFSQLGSSAGGILILWD 720

Query: 774  ----GLASKGIGALGTS--------------------------ILQNVEQFHHQQS---- 833
                 L S+  G    S                          + +++   HH  S    
Sbjct: 721  AQHHSLLSQEEGKFSLSANFSSFNNSWWLTGLYGPVKRRERLNVWEDLHNLHHLNSSPWI 780

Query: 834  -------------------SDRSS----------------LINNRFTWSNLRNPPTFSRI 893
                               S  SS                L NNR+TWSNLRNPPTFSR+
Sbjct: 781  IGGDLNVVRMREESTAVTFSSHSSNMLNDFISNNLLIDPPLTNNRYTWSNLRNPPTFSRL 840

Query: 894  DRFLYNSTWENLFSPHTTRTLPRSTSDHFPLVCENSNTKLSWGPVPFRLNSIALSDPEFK 953
            DRFLYNS WE LF+PH TRTLPR TSDHFPLVCE+S + L WGP PFRLNSIAL+DPEFK
Sbjct: 841  DRFLYNSRWEILFNPHITRTLPRPTSDHFPLVCEDSTSTLRWGPAPFRLNSIALNDPEFK 900

Query: 954  RNMGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTHAKDSILREVDSIDKKE 1013
            RNM RWWE S+Q+GHPGF FIQRLKSLAN IKPWQKEK  SLT AK++I+REVDSIDK E
Sbjct: 901  RNMERWWELSVQNGHPGFFFIQRLKSLANLIKPWQKEKFQSLTSAKENIIREVDSIDKNE 960

Query: 1014 LDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLREGDENSSFFHRICSSRQKR 1073
            LDTPL+ EESNRRLALKA+L++LSLKESQFW+QRAKKLWL+EGDENS+FFHRICSSRQKR
Sbjct: 961  LDTPLSLEESNRRLALKAELNDLSLKESQFWFQRAKKLWLKEGDENSAFFHRICSSRQKR 1020

Query: 1074 SFIHEIQDEEGLIQNTNISISTAFIKFFSKIYRSSTKSDPLFIDNLDWNPIEHSEWSHLC 1133
            + IHEIQDEEG IQNTN +IS AF+  FS+IYR STK DPLFI+NL+WNPI++S+WS LC
Sbjct: 1021 NLIHEIQDEEGSIQNTNNNISLAFVNHFSRIYRCSTKKDPLFIENLEWNPIDYSDWSLLC 1080

Query: 1134 APFLEDEIKGVINSLDGKKTPGLDGFPISFFKTYWYLLKEDILDIFKDFYDKGVINKNMN 1193
            APF E+EIKGVI S DG K PG DGFPISFFK+YW+LLKEDILDIFKDF++KGVINKNMN
Sbjct: 1081 APFSEEEIKGVIKSFDGNKAPGPDGFPISFFKSYWHLLKEDILDIFKDFFEKGVINKNMN 1140

Query: 1194 NTYIALIPKKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKTTLPDTISGNQLAFVKNRQ 1253
            NTYIALI KKKDYSHPKDFRPISLTTSIYK IAKTLSNRLK TLPDTISGNQLAF+KNRQ
Sbjct: 1141 NTYIALIEKKKDYSHPKDFRPISLTTSIYKTIAKTLSNRLKLTLPDTISGNQLAFIKNRQ 1200

Query: 1254 ITDAILMANEAVDFWKVKKIKGFILKLDIEKAFDKLNWDFIDFVLEKKNFPILWRKWIRG 1313
            ITDAILMANEA+D+WKVKKIKGFILKLDIEKAFD LNW+FID VL+K N+P  WRKWIRG
Sbjct: 1201 ITDAILMANEALDYWKVKKIKGFILKLDIEKAFDNLNWNFIDLVLKKNNYPNSWRKWIRG 1260

Query: 1314 CISNVTYSVIVNGRPQGRIKANRGLRQGDPLSPFLFVIAMDYLSRLLSHLESSGAIKGVS 1373
            CISNVTYS+IVNG+PQGRIKANRGLRQGDPLS FLFVIAMDYLSRLLSHLES+GAIKG  
Sbjct: 1261 CISNVTYSIIVNGKPQGRIKANRGLRQGDPLSLFLFVIAMDYLSRLLSHLESTGAIKG-- 1320

Query: 1374 LNSNCNISHILFADDILLFIEDNDYFLNNLRMALSLFERASSLKINLLKSALVPMNVSVN 1433
                                                                        
Sbjct: 1321 ------------------------------------------------------------ 1380

Query: 1434 RAKECASIWGIPCHSLPLSYLGVPLGGNPKSNLFWRNVEDKIQKKLNNWKYAQISKGGRL 1493
                     GI CH+LPL+YLGVPLGGNPKSNLFWRN+ED+IQKKL+NWKYA ISKGGRL
Sbjct: 1381 ---------GILCHTLPLTYLGVPLGGNPKSNLFWRNIEDRIQKKLSNWKYAHISKGGRL 1440

Query: 1494 TLIKSTLSSLPIYQLSVFQAPSMTCKNIEKSWRKFLWKGNNGSVGSHLINWTKVSKSKEE 1538
            TLIKSTLSSLPIY+LSVFQAPS T KNIEK WR FLWKG+ G  GSHLINW+ V+K KEE
Sbjct: 1441 TLIKSTLSSLPIYKLSVFQAPSSTYKNIEKLWRNFLWKGSCGLKGSHLINWSIVTKPKEE 1500

[Close]

BLAST of IVF0006653 vs. ExPASy TrEMBL
Match: A0A5A7TDG1 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001050 PE=4 SV=1)

HSP 1 Score: 1934.8 bits (5011), Expect = 0.0e+00
Identity = 997/1387 (71.88%), Postives = 1108/1387 (79.88%), Query Frame = 0


Query: 54   MAYFKSLPRSCKVERKEFVLHLDKYSKHTHYWLTETGAHKAFSIEVSPKDLDWIRCTLKS 113
            MAYFKSLPRSCK+ERKEFVL LDKY+KHTHYWLTETGAHKAFSIEVSP+DLDWIR TLKS
Sbjct: 1    MAYFKSLPRSCKIERKEFVLLLDKYAKHTHYWLTETGAHKAFSIEVSPRDLDWIRSTLKS 60

Query: 114  LIATPNTNRFFLETRDSEQCIWIRKTRNSKGCTAEIFRVDQKNRKSCILVPEGPEKSGWV 173
            LI TP++NRFFLE RD E CIWIRKTRN KGCTAEIFRVD KNRKSCILVPEG EKS WV
Sbjct: 61   LIETPSSNRFFLENRDYEHCIWIRKTRNGKGCTAEIFRVDHKNRKSCILVPEGLEKSCWV 120

Query: 174  SFLSMITPKVEVKAKTRPTFLPRSSPDGRLSPPIDYHKRSYARAVTEGRA--TSDSSDSY 233
            SFLSMITPKVEVKAKTRP FLPRSSP+ RLSPPIDYHKRSYA+AV+EGR+  +SDSSDSY
Sbjct: 121  SFLSMITPKVEVKAKTRPIFLPRSSPEFRLSPPIDYHKRSYAKAVSEGRSSISSDSSDSY 180

Query: 234  DTSDSSHSSGNSFCDSPSSDLLENTVVIVRRFFHDDWHKILQNLRKQTEESFTYNAFHAE 293
             +SDSS SSGNS CDSP   LLENTVV+VRRFFHDDW KILQNLRKQTEESFTYNAFHAE
Sbjct: 181  ASSDSSQSSGNSPCDSPFPVLLENTVVLVRRFFHDDWQKILQNLRKQTEESFTYNAFHAE 240

Query: 294  KALVHFSSNIPANLLCQNKGWTTVGKYSVKFEKWSSAYHATPKLIPSYGGWTTFRGIPLH 353
            K LVHF+SN+PANLLCQNKGWTTVGKY+V+FEKW+ A HA+PKLIPSYGGWTTFRGIPLH
Sbjct: 241  KVLVHFNSNVPANLLCQNKGWTTVGKYTVRFEKWAPASHASPKLIPSYGGWTTFRGIPLH 300

Query: 354  LWNMTTFQQLGKACGGLIKVAEETRSAKNLVKARIKVRYNYSGFLPANVRIFDNEGNKFS 413
            LWNM TFQQ+GKACGGLIKVAEET++A+NL++A++K+RYNYSGFLPA V+IFD EGNKF 
Sbjct: 301  LWNMMTFQQIGKACGGLIKVAEETKTARNLIEAKLKIRYNYSGFLPAYVKIFDQEGNKFV 360

Query: 414  IQVVTHPEGKWLIERNVRLHGTFKRQAAAAFDEFNPESEQFFFEGMEAISPDFLSTSSDG 473
            +QVVTH EGKWL+ERNVRLHGTFKRQAAA+FD+FNP+SEQF F+G+EAISPD L+T S  
Sbjct: 361  VQVVTHSEGKWLMERNVRLHGTFKRQAAASFDDFNPDSEQFLFDGLEAISPDLLNTISGS 420

Query: 474  RKSNTPDQPPALKSVIIKSDRVATSPSFLNEEVVNDSNLHATANKSKSEILPGISNDGVL 533
            RKS +P+QP ALKSVIIK  + ATSP+ LNEEVVND++LHATANKSK +IL GISNDG L
Sbjct: 421  RKSISPEQPSALKSVIIKPAKYATSPTTLNEEVVNDNSLHATANKSKLKILSGISNDGSL 480

Query: 534  DKGKQKVDIQLQPNSALNLDKSKRKVSFNSPCNKTNIFNPDSAPANHSPSLSSPEKKQKV 593
            DKGKQKVDI  Q  SA    K KRKVSFNSP NKT  FNPDSAPANH     SPEKK++V
Sbjct: 481  DKGKQKVDIPSQLTSAFIFYKPKRKVSFNSPSNKTTFFNPDSAPANH-----SPEKKKRV 540

Query: 594  SRER-------------------------------------------------------- 653
            SRER                                                        
Sbjct: 541  SRERSVKKKSSTIQPKLRANQGKGNLITQPLQVVAHDLDASKKGLSLTVDLGNLPVLDPS 600

Query: 654  ----NHHSSDNAEVIDITNTEVVPETPEMKMQVNENSNSSSEANYRKPKHVHKRKYYYRK 713
                +HHSSDNAEVIDITNTEVVPETPE+KM   E SNSS E NYRK KH H+R++YYRK
Sbjct: 601  KSFEDHHSSDNAEVIDITNTEVVPETPELKMTDPEKSNSSPEVNYRKQKHSHRRRHYYRK 660

Query: 714  KEEKEKDPDSKAFKKQLASWLKENGLKISTVTDSSGATTSTNVLINQLNS---------- 773
            KE+KEKD +S+AFK QL +WLKENGLK+S  TDSSGATTSTN L +QL S          
Sbjct: 661  KEDKEKDTNSEAFKNQLVTWLKENGLKLSIDTDSSGATTSTNALFSQLGSSAGGILILWD 720

Query: 774  ----GLASKGIGALGTS--------------------------ILQNVEQFHHQQS---- 833
                 L S+  G    S                          + +++   HH  S    
Sbjct: 721  AQHHSLLSQEEGKFSLSANFSSFNNSWWLTGLYGPVKRRERLNVWEDLHNLHHLNSSPWI 780

Query: 834  -------------------SDRSS----------------LINNRFTWSNLRNPPTFSRI 893
                               S  SS                L NNR+TWSNLRNPPTFSR+
Sbjct: 781  IGGDLNVVRMREESTAVTFSSHSSNMLNDFISNNLLIDPPLTNNRYTWSNLRNPPTFSRL 840

Query: 894  DRFLYNSTWENLFSPHTTRTLPRSTSDHFPLVCENSNTKLSWGPVPFRLNSIALSDPEFK 953
            DRFLYNS WE LF+PH TRTLPR TSDHFPLVCE+S + L WGP PFRLNSIAL+DPEFK
Sbjct: 841  DRFLYNSRWEILFNPHITRTLPRPTSDHFPLVCEDSTSTLRWGPAPFRLNSIALNDPEFK 900

Query: 954  RNMGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTHAKDSILREVDSIDKKE 1013
            RNM RWWE S+Q+GHPGF FIQRLKSLAN IKPWQKEK  SLT AK++I+REVDSIDK E
Sbjct: 901  RNMERWWELSVQNGHPGFFFIQRLKSLANLIKPWQKEKFQSLTSAKENIIREVDSIDKNE 960

Query: 1014 LDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLREGDENSSFFHRICSSRQKR 1073
            LDTPL+ EESNRRLALKA+L++LSLKESQFW+QRAKKLWL+EGDENS+FFHRICSSRQKR
Sbjct: 961  LDTPLSLEESNRRLALKAELNDLSLKESQFWFQRAKKLWLKEGDENSAFFHRICSSRQKR 1020

Query: 1074 SFIHEIQDEEGLIQNTNISISTAFIKFFSKIYRSSTKSDPLFIDNLDWNPIEHSEWSHLC 1133
            + IHEIQDEEG IQNTN +IS AF+  FS+IYR STK DPLFI+NL+WNPI++S+WS LC
Sbjct: 1021 NLIHEIQDEEGSIQNTNNNISLAFVNHFSRIYRCSTKKDPLFIENLEWNPIDYSDWSLLC 1080

Query: 1134 APFLEDEIKGVINSLDGKKTPGLDGFPISFFKTYWYLLKEDILDIFKDFYDKGVINKNMN 1193
            APF E+EIKGVI S DG K PG DGFPISFFK+YW+LLKEDILDIFKDF++KGVINKNMN
Sbjct: 1081 APFSEEEIKGVIKSFDGNKAPGPDGFPISFFKSYWHLLKEDILDIFKDFFEKGVINKNMN 1140

Query: 1194 NTYIALIPKKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKTTLPDTISGNQLAFVKNRQ 1253
            NTYIALI KKKDYSHPKDFRPISLTTSIYK IAKTLSNRLK TLPDTISGNQLAF+KNRQ
Sbjct: 1141 NTYIALIEKKKDYSHPKDFRPISLTTSIYKTIAKTLSNRLKLTLPDTISGNQLAFIKNRQ 1200

Query: 1254 ITDAILMANEAVDFWKVKKIKGFILKLDIEKAFDKLNWDFIDFVLEKKNFPILWRKWIRG 1300
            ITDAILMANEA+D+WKVKKIKGFILKLDIEKAFD LNW+FID VL+K N+P  WRKWIRG
Sbjct: 1201 ITDAILMANEALDYWKVKKIKGFILKLDIEKAFDNLNWNFIDLVLKKNNYPNSWRKWIRG 1260

[Close]

BLAST of IVF0006653 vs. ExPASy TrEMBL
Match: A0A5D3C3M3 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G003160 PE=4 SV=1)

HSP 1 Score: 1895.9 bits (4910), Expect = 0.0e+00
Identity = 1014/1582 (64.10%), Postives = 1129/1582 (71.37%), Query Frame = 0


Query: 54   MAYFKSLPRSCKVERKEFVLHLDKYSKHTHYWLTETGAHKAFSIEVSPKDLDWIRCTLKS 113
            MAYFKSLPRSCK+ERKEFVL LDKY+KHTHYWLTETGAHKAFSIEVSP+DLDWIR TLKS
Sbjct: 1    MAYFKSLPRSCKIERKEFVLLLDKYAKHTHYWLTETGAHKAFSIEVSPRDLDWIRSTLKS 60

Query: 114  LIATPNTNRFFLETRDSEQCIWIRKTRNSKGCTAEIFRVDQKNRKSCILVPEGPEKSGWV 173
            LI TP++NRFFLE RD E CIWIRKTRN KGCTAEIFRVD KNRKSCILVPEGPEKSG V
Sbjct: 61   LIETPSSNRFFLENRDYEHCIWIRKTRNGKGCTAEIFRVDHKNRKSCILVPEGPEKSGRV 120

Query: 174  SFLSMITPKVEVKAKTRPTFLPRSSPDGRLSPPIDYHKRSYARAVTEGRA--TSDSSDSY 233
            SFLSMITPKVEVKAKTRPTFLPRSSP+ RLSPPIDYHKRSY +AV++GR+  +SDSSDSY
Sbjct: 121  SFLSMITPKVEVKAKTRPTFLPRSSPEFRLSPPIDYHKRSYEKAVSKGRSSISSDSSDSY 180

Query: 234  DTSDSSHSSGNSFCDSPSSDLLENTVVIVRRFFHDDWHKILQNLRKQTEESFTYNAFHAE 293
             +SDSS SSGNS CDSP   LLENTVV+                                
Sbjct: 181  TSSDSSQSSGNSPCDSPFPVLLENTVVL-------------------------------- 240

Query: 294  KALVHFSSNIPANLLCQNKGWTTVGKYSVKFEKWSSAYHATPKLIPSYGGWTTFRGIPLH 353
             AL+HF+SN+PANLLCQNKGWTTV KY V+                              
Sbjct: 241  -ALIHFNSNVPANLLCQNKGWTTVEKYMVR------------------------------ 300

Query: 354  LWNMTTFQQLGKACGGLIKVAEETRSAKNLVKARIKVRYNYSGFLPANVRIFDNEGNKFS 413
                                                                        
Sbjct: 301  ------------------------------------------------------------ 360

Query: 414  IQVVTHPEGKWLIERNVRLHGTFKRQAAAAFDEFNPESEQFFFEGMEAISPDFLSTSSDG 473
                                                   +  F+G+EAISPD L+T S  
Sbjct: 361  ---------------------------------------KSLFDGLEAISPDLLNTISGS 420

Query: 474  RKSNTPDQPPALKSVIIKSDRVATSPSFLNEEVVNDSNLHATANKSKSEILPGISNDGVL 533
            RKSN+ +QP ALKSVIIK  R ATSP+ LNEEVVND++LHAT  KS+ +IL GISNDG L
Sbjct: 421  RKSNSREQPSALKSVIIKPARDATSPTTLNEEVVNDNSLHATTIKSELKILSGISNDGSL 480

Query: 534  DKGKQKVDIQLQPNSALNLDKSKRKVSFNSPCNKTNIFNPDSAPANHSPSLSSPEKKQKV 593
            DKGKQKVDI  Q  SA   DK KRKVSFNSP NKT  FN DSAP NHSP LSSPEKKQ+V
Sbjct: 481  DKGKQKVDIPSQLTSAFIYDKPKRKVSFNSPSNKTTFFNSDSAPTNHSPPLSSPEKKQRV 540

Query: 594  SRER-------------------------------------------------------- 653
            SRER                                                        
Sbjct: 541  SRERSVKKKSSTIQPKSRANQGKGELITQPLQVVAHDLDASKKGLSLTVDLGNLPVLDPS 600

Query: 654  ----NHHSSDNAEVIDITNTEVVPETPEMKMQVNENSNSSSEANYRKPKHVHKRKYYYRK 713
                +HHSSDNAEVIDITNTEVVPETPE+KM   E SNSS E NYRK KH H+R++YYRK
Sbjct: 601  KSFEDHHSSDNAEVIDITNTEVVPETPELKMTDPEKSNSSPEVNYRKQKHSHRRRHYYRK 660

Query: 714  KEEKEKDPDSKAFKKQLASWLKENGLKISTVTDSSGATTSTNVLINQLNSGLASKGIGAL 773
            KE+KEKD +S+AFK QL +WLKENGLK+ST TDSSGATTSTN L +QL S ++     A+
Sbjct: 661  KEDKEKDTNSEAFKNQLVTWLKENGLKLSTDTDSSGATTSTNALFSQLGSSISWIVKNAI 720

Query: 774  GTS--ILQNVEQFHHQ------------------QSSDRSS----------------LIN 833
             +S  IL   +  HH                    SS  SS                L N
Sbjct: 721  DSSGGILILWDAQHHSLLRGDLNVVRMREESTAVTSSSHSSNMLNNFISNNLLIDPPLTN 780

Query: 834  NRFTWSNLRNPPTFSRIDRFLYNSTWENLFSPHTTRTLPRSTSDHFPLVCENSNTKLSWG 893
            NR+TWSNLRNPPTFSR+DRFLYNS WE LF+PH TRTL R TSDHFPLVCE+S + L WG
Sbjct: 781  NRYTWSNLRNPPTFSRLDRFLYNSRWETLFNPHITRTLSRPTSDHFPLVCEDSTSTLRWG 840

Query: 894  PVPFRLNSIALSDPEFKRNMGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLT 953
            P PFRLNSIAL+DP+FKRNM RWWE S+Q+GHPGFSFI+RLKSLAN IKPWQKEK HSLT
Sbjct: 841  PAPFRLNSIALNDPKFKRNMERWWELSVQNGHPGFSFIRRLKSLANLIKPWQKEKFHSLT 900

Query: 954  HAKDSILREVDSIDKKELDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLREG 1013
             AK++I+REVDSIDK ELDTPL+QEESNRRLALKA+LS+LSLKESQFW+QRAKKLWL+EG
Sbjct: 901  SAKENIIREVDSIDKNELDTPLSQEESNRRLALKAELSDLSLKESQFWFQRAKKLWLKEG 960

Query: 1014 DENSSFFHRICSSRQKRSFIHEIQDEEGLIQNTNISISTAFIKFFSKIYRSSTKSDPLFI 1073
            DENS+FFHRICSSRQKR+ IHEIQDEEG IQNTN +IS AF+  FS IYR STK DPLFI
Sbjct: 961  DENSAFFHRICSSRQKRNLIHEIQDEEGSIQNTNNNISLAFVNHFSSIYRCSTKKDPLFI 1020

Query: 1074 DNLDWNPIEHSEWSHLCAPFLEDEIKGVINSLDGKKTPGLDGFPISFFKTYWYLLKEDIL 1133
            +NL+WNPI++S+WS LCAPFLE+EIKGVI S DG K PG DGFPISFFK+YW+LLKEDIL
Sbjct: 1021 ENLEWNPIDYSDWSLLCAPFLEEEIKGVIKSFDGNKAPGPDGFPISFFKSYWHLLKEDIL 1080

Query: 1134 DIFKDFYDKGVINKNMNNTYIALIPKKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKTT 1193
            DIFKDF++KG                                     IIAKTLSNRLK T
Sbjct: 1081 DIFKDFFEKG-------------------------------------IIAKTLSNRLKLT 1140

Query: 1194 LPDTISGNQLAFVKNRQITDAILMANEAVDFWKVKKIKGFILKLDIEKAFDKLNWDFIDF 1253
            LPDTISGNQLAF+KNRQITDAIL ANEA+D+WKVKKIK FILKLDIEKAFD LNWDFIDF
Sbjct: 1141 LPDTISGNQLAFIKNRQITDAILRANEALDYWKVKKIKSFILKLDIEKAFDNLNWDFIDF 1200

Query: 1254 VLEKKNFPILWRKWIRGCISNVTYSVIVNGRPQGRIKANRGLRQGDPLSPFLFVIAMDYL 1313
            VL+KKN+P  WRKWIRGCISNVTYS+IVN +PQ RIKANRGLRQGDPLSPFLFV AMDYL
Sbjct: 1201 VLKKKNYPNSWRKWIRGCISNVTYSIIVNEKPQDRIKANRGLRQGDPLSPFLFVSAMDYL 1260

Query: 1314 SRLLSHLESSGAIKGVSLNSNCNISHILFADDILLFIEDNDYFLNNLRMALSLFERASSL 1373
            SRLLSHLESSGAIKGV L ++CNISHILFADDILLF+EDND+FLNNLRMALSLFE+AS L
Sbjct: 1261 SRLLSHLESSGAIKGVCLANDCNISHILFADDILLFVEDNDHFLNNLRMALSLFEKASGL 1320

Query: 1374 KINLLKSALVPMNVSVNRAKECASIWGIPCHSLPLSYLGVPLGGNPKSNLFWRNVEDKIQ 1433
            KINL KSA+VP+NVS +RA ECAS WGI CH+LPL+YLGVPLGGNPKSN+FWRN+ED+IQ
Sbjct: 1321 KINLSKSAMVPVNVSWSRALECASSWGISCHTLPLTYLGVPLGGNPKSNIFWRNIEDRIQ 1380

Query: 1434 KKLNNWKYAQISKGGRLTLIKSTLSSLPIYQLSVFQAPSMTCKNIEKSWRKFLWKGNNGS 1493
            KKLNNWKYA ISKGGRLTLIKSTLSSL IYQLSVFQAP  T KNIEK WR FLWKG+ G 
Sbjct: 1381 KKLNNWKYAHISKGGRLTLIKSTLSSLSIYQLSVFQAPPSTYKNIEKLWRNFLWKGSFGL 1383

Query: 1494 VGSHLINWTKVSKSKEEGGLGTSRLHVTNKALLTKWLWRYLSEPNALWRRLIQCKYKGNY 1538
             GSHLINW+ V+K KEEGGLG SRL V N+ALL+KWLWRY SEPN+LWRRLI  KYKG +
Sbjct: 1441 KGSHLINWSIVTKLKEEGGLGISRLQVINQALLSKWLWRYYSEPNSLWRRLIHIKYKGKH 1383

[Close]

BLAST of IVF0006653 vs. ExPASy TrEMBL
Match: A0A5A7UV84 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G001710 PE=4 SV=1)

HSP 1 Score: 1700.3 bits (4402), Expect = 0.0e+00
Identity = 953/1539 (61.92%), Postives = 1029/1539 (66.86%), Query Frame = 0


Query: 178  MITPKVEVKAKTRPTFLPRSSPDGRLSPPIDYHKRSYARAVTEGR--ATSDSSDSYDTSD 237
            MITPKVEVK KTRPTFLPRSSP+ RLSPPIDYHKRSYA+ VTEGR   TSDSSDSY +SD
Sbjct: 1    MITPKVEVKEKTRPTFLPRSSPEYRLSPPIDYHKRSYAKVVTEGRPFTTSDSSDSYVSSD 60

Query: 238  SSHSSGNSFCDSPSSDLLENTVVIVRRFFHDDWHKILQNLRKQTEESFTYNAFHAEKALV 297
            SSHSSGNSFCDSPS DLLENTVV+VRRFFHDDW KILQNLRKQTEESFTYNAFHAEKALV
Sbjct: 61   SSHSSGNSFCDSPSPDLLENTVVLVRRFFHDDWQKILQNLRKQTEESFTYNAFHAEKALV 120

Query: 298  HFSSNIPANLLCQNKGWTTVGKYSVKFEKWSSAYHATPKLIPSYGGWTTFRGIPLHLWNM 357
            HF+SNIP NLLCQNKGWTTVGKYSV+FEKWS AYHATPKLIPSYGGWTTF+         
Sbjct: 121  HFNSNIPENLLCQNKGWTTVGKYSVRFEKWSPAYHATPKLIPSYGGWTTFQ--------- 180

Query: 358  TTFQQLGKACGGLIKVAEETRSAKNLVKARIKVRYNYSGFLPANVRIFDNEGNKFSIQVV 417
                                R++  LV+                                
Sbjct: 181  --------------------RNSATLVE-------------------------------- 240

Query: 418  THPEGKWLIERNVRLHGTFKRQAAAAFDEFNPESEQ----FFFEGMEAISPDFLSTSSDG 477
                                      +D+F+   E       F+G EAISPDFLSTSS  
Sbjct: 241  --------------------------YDDFSTNCESLRRIILFDGSEAISPDFLSTSSRS 300

Query: 478  RKSNTPDQPPALKSVIIKSDRVATSPSFLNEEVVNDSNLHATANKSKSEILPGISNDGVL 537
            RKS+TPDQP ALKSVIIK D+ ATSP++LNEEVVNDSNLHATANKS+ EIL GI NDGVL
Sbjct: 301  RKSSTPDQPSALKSVIIKPDKAATSPTYLNEEVVNDSNLHATANKSRLEILSGIPNDGVL 360

Query: 538  DKGKQKVDIQLQPNSALNLDKSKRKVSFNSPCNKTNIFNPDSAPANHSPSLSSPEKKQKV 597
            DKGKQKVDIQL PNSALNL+K KRKVSFNSP NKTNIFNPDSAPANHS SLSSPEKKQKV
Sbjct: 361  DKGKQKVDIQLHPNSALNLNKPKRKVSFNSPSNKTNIFNPDSAPANHSLSLSSPEKKQKV 420

Query: 598  SRER-------------------------------------------------------- 657
            SRER                                                        
Sbjct: 421  SRERSIKKKSSSIQPIQNKGVLITQPIQVVAHDLEASKKGLSLIVNLGDLPVLDPSKSFE 480

Query: 658  NHHSSDNAEVIDITNTEVVPETPEMKMQVNENSNSSSEANYRKPKHVHKRKYYYRKKEEK 717
            +HHSS NAEVIDITNTEVVPETPEMKM VNENSNSSSEANYRKPKHVH+R+YYYRKK  K
Sbjct: 481  DHHSSHNAEVIDITNTEVVPETPEMKMPVNENSNSSSEANYRKPKHVHRRRYYYRKKRSK 540

Query: 718  EKDPDSKA--------FKKQLASW---------------------------LKENGLKIS 777
             +    +          K +L +W                           L E  LKI+
Sbjct: 541  GEGSGLRGEWGSGDIYCKMKLLTWNARGLGSPSKRALIKNAIISYSPDFVILTETMLKIT 600

Query: 778  T----------------VTDSSGATTSTNVLINQLNSGLAS--KGIGALGTSILQNVE-- 837
                             V ++SG++    +L +  +  L S  + I +L  +   N    
Sbjct: 601  NKRIIKSFWPSNSINWIVKNASGSSGGILILWDAQSHSLLSQEEAIFSLSANFFLNNNSS 660

Query: 838  --------------------QFHHQQ--------------------------SSDRSS-- 897
                                  H+ Q                          SS  SS  
Sbjct: 661  WWLTGLYGPDKRRKRIHFWADLHNLQHLNSFPWSLERDLNVIRMREETTSILSSSHSSRM 720

Query: 898  --------------LINNRFTWSNLRNPPTFSRIDRFLYNSTWENLFSPHTTRTLPRSTS 957
                          L NNRFTWSNLRNP TFSRIDRFLYNS+WENLFSPHTTRTLPR TS
Sbjct: 721  LNNFISNNLLIDPPLTNNRFTWSNLRNPSTFSRIDRFLYNSSWENLFSPHTTRTLPRPTS 780

Query: 958  DHFPLVCENSNTKLSWGPVPFRLNSIALSDPEFKRNMGRWWENSIQDGHPGFSFIQRLKS 1017
            DHFPLVCE+SN KL WGP PFRLNSIAL+DPEFKRNM RWWENS+Q+GHPGFSFIQRLKS
Sbjct: 781  DHFPLVCEDSNPKLRWGPAPFRLNSIALNDPEFKRNMERWWENSVQNGHPGFSFIQRLKS 840

Query: 1018 LANFIKPWQKEKLHSLTHAKDSILREVDSIDKKELDTPLTQEESNRRLALKADLSELSLK 1077
            LAN IKPWQKEKLHSL +AK++I+REVDSIDKKELDTPL+Q+ESNRRLALKA+LS+LSLK
Sbjct: 841  LANHIKPWQKEKLHSLNYAKETIIREVDSIDKKELDTPLSQKESNRRLALKAELSDLSLK 900

Query: 1078 ESQFWYQRAKKLWLREGDENSSFFHRICSSRQKRSFIHEIQDEEGLIQNTNISISTAFIK 1137
            ESQF                       C                                
Sbjct: 901  ESQF-----------------------C-------------------------------- 960

Query: 1138 FFSKIYRSSTKSDPLFIDNLDWNPIEHSEWSHLCAPFLEDEIKGVINSLDGKKTPGLDGF 1197
                IY+SSTKSDPLFI+NLDWNPIE SEW HLCAPFLE+EIKGVINS DGKK P  DGF
Sbjct: 961  ----IYKSSTKSDPLFIENLDWNPIEFSEWPHLCAPFLEEEIKGVINSFDGKKAPSPDGF 1020

Query: 1198 PISFFKTYWYLLKEDILDIFKDFYDKGVINKNMNNTYIALIPKKKDYSHPKDFRPISLTT 1257
            PISFFK+YW+LLKEDI+DIFKDF++KGVINKNMNNTYIALI KKKDYSHPKDFRPISLTT
Sbjct: 1021 PISFFKSYWHLLKEDIMDIFKDFFEKGVINKNMNNTYIALIGKKKDYSHPKDFRPISLTT 1080

Query: 1258 SIYKIIAKTLSNRLKTTLPDTISGNQLAFVKNRQITDAILMANEAVDFWKVKKIKGFILK 1317
            SIYKIIAKTLSNRLKTTLP TISGNQLAF+KNRQITDAILMANEAVD+WKVKKIKGFILK
Sbjct: 1081 SIYKIIAKTLSNRLKTTLPGTISGNQLAFIKNRQITDAILMANEAVDYWKVKKIKGFILK 1140

Query: 1318 LDIEKAFDKLNWDFIDFVLEKKNFPILWRKWIRGCISNVTYSVIVNGRPQGRIKANRGLR 1377
            LDIEK F  LNWDFID+VL KKNFP  WRKWIRGCISNVTYSVI+NGRPQGRIKANRGLR
Sbjct: 1141 LDIEKVFYNLNWDFIDYVLGKKNFPNSWRKWIRGCISNVTYSVIINGRPQGRIKANRGLR 1200

Query: 1378 QGDPLSPFLFVIAMDYLSRLLSHLESSGAIKGVSLNSNCNISHILFADDILLFIEDNDYF 1437
            QGDPLSPFLFVIAMDY SRLLSHLE+SGAIKGVSLN+NCNISHILFADDILLF+EDND F
Sbjct: 1201 QGDPLSPFLFVIAMDYFSRLLSHLEASGAIKGVSLNNNCNISHILFADDILLFVEDNDCF 1260

Query: 1438 LNNLRMALSLFERASSLKINLLKSALVPMNVSVNRAKECASIWGIPCHSLPLSYLGVPLG 1497
            LNNL MALSLFE+AS LKINLLKSALVP+NVS+NRAKECAS WGI CHSL LSYLGVPLG
Sbjct: 1261 LNNLIMALSLFEKASGLKINLLKSALVPVNVSLNRAKECASFWGISCHSLLLSYLGVPLG 1320

Query: 1498 GNPKSNLFWRNVEDKIQKKLNNWKYAQISKGGRLTLIKSTLSSLPIYQLSVFQAPSMTCK 1538
                                                                        
Sbjct: 1321 ------------------------------------------------------------ 1321

[Close]

BLAST of IVF0006653 vs. NCBI nr
Match: TYJ99315.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 2540 bits (6583), Expect = 0.0
Identity = 1321/1687 (78.30%), Postives = 1378/1687 (81.68%), Query Frame = 0


Query: 21   SSLLLAVKRSLSSPVLFTAFHLPSLVFPTISQTMAYFKSLPRSCKVERKEFVLHLDKYSK 80
            + LLL VKRSLS PVLF AFHLPSL F        +FKSLPRSCKVERKEFVLHLDKYSK
Sbjct: 22   TDLLLVVKRSLSPPVLFIAFHLPSLAFSYNLPNNGHFKSLPRSCKVERKEFVLHLDKYSK 81

Query: 81   HTHYWLTETGAHKAFSIEVSPKDLDWIRCTLKSLIATPNTNRFFLETRDSEQCIWIRKTR 140
            HTHYWLTETGAHKAFSIEVSP+DLDWIRCTLKSLIATPNTNRFFLETRDSEQ IWIRKTR
Sbjct: 82   HTHYWLTETGAHKAFSIEVSPRDLDWIRCTLKSLIATPNTNRFFLETRDSEQRIWIRKTR 141

Query: 141  NSKGCTAEIFRVDQKNRKSCILVPEGPEKSGWVSFLSMITPKVEVKAKTRPTFLPRSSPD 200
            NSKGCTAEIFRVDQKNRKSCILVPEGP+KSGWVSFLSMITPKVEVKAKTRPTFLPR+SPD
Sbjct: 142  NSKGCTAEIFRVDQKNRKSCILVPEGPDKSGWVSFLSMITPKVEVKAKTRPTFLPRTSPD 201

Query: 201  GRLSPPIDYHKRSYARAVTEGR--ATSDSSDSYDTSDSSHSSGNSFCDSPSSDLLENTVV 260
             RLSPPIDYHKRSYA+AVTEGR  ATSDSSDSYD+SDSSHSS NSFCDSPSSDLLENTVV
Sbjct: 202  CRLSPPIDYHKRSYAKAVTEGRPFATSDSSDSYDSSDSSHSSSNSFCDSPSSDLLENTVV 261

Query: 261  IVRRFFHDDWHKILQNLRKQTEESFTYNAFHAEKALVHFSSNIPANLLCQNKGWTTVGKY 320
            IVRRFFHDDWHKILQNLRKQTEESFTYNAFHAEKALVHFSSNIPANLLCQNKGW+TVGKY
Sbjct: 262  IVRRFFHDDWHKILQNLRKQTEESFTYNAFHAEKALVHFSSNIPANLLCQNKGWSTVGKY 321

Query: 321  SVKFEKWSSAYHATPKLIPSYGGWTTFRGIPLHLWNMTTFQQLGKACGGLIKVAEETRSA 380
            SV+FEKWS  YHATPKLIPSYGGWTTFRGIPLHLWNM TFQQ+GKAC GLIKVAEETRSA
Sbjct: 322  SVRFEKWSPVYHATPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACEGLIKVAEETRSA 381

Query: 381  KNLVKARIKVRYNYSGFLPANVRIFDNEGNKFSIQVVTHPEGKWLIERNVRLHGTFKRQA 440
            KNL++ARIKVRYNYSGFLPANVRIFDNEGNKF +QVVTHPEGKWLIERNVRLHGTFKRQA
Sbjct: 382  KNLIEARIKVRYNYSGFLPANVRIFDNEGNKFFVQVVTHPEGKWLIERNVRLHGTFKRQA 441

Query: 441  AAAFDEFNPESEQFFFEGMEAISPDFLSTSSDGRKSNTPDQPPALKSVIIKSDRVATSPS 500
            AA+FD+FNPESEQFFFEG EAISPDFLSTSSDGRKS+TPDQP ALKSVIIK DR AT PS
Sbjct: 442  AASFDDFNPESEQFFFEGSEAISPDFLSTSSDGRKSSTPDQPSALKSVIIKPDRNATLPS 501

Query: 501  FLNEEVVNDSNLHATANKSKSEILPGISNDGVLDKGKQKVDIQLQPNSALNLDKSKRKVS 560
            FLNEE+VNDSNLHATANKSK EIL GISNDGVLDKGKQKVDIQLQPNSALNLDKSKRKVS
Sbjct: 502  FLNEELVNDSNLHATANKSKLEILSGISNDGVLDKGKQKVDIQLQPNSALNLDKSKRKVS 561

Query: 561  FNSPCNKTNIFNPDSAPANHSPSLSSPEKKQKVSRERN---------------------- 620
            FNSP NKTNIFNPDSAPANHSPSL+SPEKKQKVSRER+                      
Sbjct: 562  FNSPSNKTNIFNPDSAPANHSPSLNSPEKKQKVSRERSIKKKSSSTQPNSKANQNKGVFI 621

Query: 621  --------------------------------------HHSSDNAEVIDITNTEVVPETP 680
                                                  HH+SDNAEV+DITNTEVVPETP
Sbjct: 622  TQPIQIVAHDRDAAKKGLSLTVDLGDLPALDPNKSLEDHHNSDNAEVVDITNTEVVPETP 681

Query: 681  EMKMQVNENSNSSSEANYRKPKHVHKRKYYYRKKEEKEKDPDSKAFKKQLASWLKENGLK 740
            EMKM VNENSNSSSEANYRKPKHVHKRKYYYRKKEEKEKDPDS+AFKKQL SWLK+NGLK
Sbjct: 682  EMKMPVNENSNSSSEANYRKPKHVHKRKYYYRKKEEKEKDPDSEAFKKQLVSWLKKNGLK 741

Query: 741  ISTVTDSSGATTSTNVLINQLNSGLA---------------------------------- 800
            +ST TDSSGATTSTNVL+NQ+NSGL                                   
Sbjct: 742  LSTDTDSSGATTSTNVLLNQMNSGLKITNKRIIKSLWPSNSINWIAKNASGSSGGILILW 801

Query: 801  ----------SKGIGALGTSILQNVE----------------------QFHHQQ------ 860
                       +G+ +L  + L N                        + H+ Q      
Sbjct: 802  DAQNHSLLSQEEGLFSLSANFLLNNNSSWWLTGLYGPVKRRERIHFWAELHNLQHLNSFP 861

Query: 861  --------------------SSDRSS----------------LINNRFTWSNLRNPPTFS 920
                                SS  +S                L NNRFTWSNLRNPPTFS
Sbjct: 862  WILGGDLNVIRMREESTSVLSSSHNSRMLNNFISNNLLIDPPLTNNRFTWSNLRNPPTFS 921

Query: 921  RIDRFLYNSTWENLFSPHTTRTLPRSTSDHFPLVCENSNTKLSWGPVPFRLNSIALSDPE 980
            RIDRFLYNS+WENLFSPHTTRTLPRSTSDHFPLVCE+SN KLSWGP+PFRLNSI LSDPE
Sbjct: 922  RIDRFLYNSSWENLFSPHTTRTLPRSTSDHFPLVCEDSNPKLSWGPIPFRLNSITLSDPE 981

Query: 981  FKRNMGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTHAKDSILREVDSIDK 1040
            FKRNMGRWWENSIQ G+PGFSFIQRLKSLANFIKPWQKEKLHSLT+AK++I+REVDSIDK
Sbjct: 982  FKRNMGRWWENSIQAGYPGFSFIQRLKSLANFIKPWQKEKLHSLTYAKEAIIREVDSIDK 1041

Query: 1041 KELDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLREGDENSSFFHRICSSRQ 1100
            KELDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLREGDENSSFFHRICSSRQ
Sbjct: 1042 KELDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLREGDENSSFFHRICSSRQ 1101

Query: 1101 KRSFIHEIQDEEGLIQNTNISISTAFIKFFSKIYRSSTKSDPLFIDNLDWNPIEHSEWSH 1160
            KRSFIHEIQDEEG IQNTN SISTAFIKFFS+IYRSSTKSDPLFI+NLDWNPI  SEWSH
Sbjct: 1102 KRSFIHEIQDEEGSIQNTNNSISTAFIKFFSRIYRSSTKSDPLFIENLDWNPIASSEWSH 1161

Query: 1161 LCAPFLEDEIKGVINSLDGKKTPGLDGFPISFFKTYWYLLKEDILDIFKDFYDKGVINKN 1220
            LCAPFLE EIKGVINS DGKKTPG DGFPISFFK++W                       
Sbjct: 1162 LCAPFLEGEIKGVINSFDGKKTPGPDGFPISFFKSHW----------------------- 1221

Query: 1221 MNNTYIALIPKKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKTTLPDTISGNQLAFVKN 1280
                                                     LKTTLP+TISGNQLAFVKN
Sbjct: 1222 -----------------------------------------LKTTLPNTISGNQLAFVKN 1281

Query: 1281 RQITDAILMANEAVDFWKVKKIKGFILKLDIEKAFDKLNWDFIDFVLEKKNFPILWRKWI 1340
            RQITDAILMANEAVD+WKVKKIKGFILKLDIEKAFD LN DFID VLEKKNFP  WRKWI
Sbjct: 1282 RQITDAILMANEAVDYWKVKKIKGFILKLDIEKAFDNLNLDFIDNVLEKKNFPNPWRKWI 1341

Query: 1341 RGCISNVTYSVIVNGRPQGRIKANRGLRQGDPLSPFLFVIAMDYLSRLLSHLESSGAIKG 1400
            RGCISNVTYSVI+NGRPQGRIKANRGLRQGDPLSPFLFVIAMDYLSRLLSHLESSGAIKG
Sbjct: 1342 RGCISNVTYSVIINGRPQGRIKANRGLRQGDPLSPFLFVIAMDYLSRLLSHLESSGAIKG 1401

Query: 1401 VSLNSNCNISHILFADDILLFIEDNDYFLNNLRMALSLFERASSLKINLLKSALVPMNVS 1460
            VSLN NCNISHILFADDILLFIEDND FL NLRMALSLFERAS LKINLLKSALVP+NVS
Sbjct: 1402 VSLNGNCNISHILFADDILLFIEDNDCFLKNLRMALSLFERASGLKINLLKSALVPVNVS 1461

Query: 1461 VNRAKECASIWGIPCHSLPLSYLGVPLGGNPKSNLFWRNVEDKIQKKLNNWKYAQISKGG 1520
            + RAKECAS WGI CHSLPLSYLGVPLGGNPKSNLFWRNVEDKIQKKLNNWKYAQISKGG
Sbjct: 1462 LKRAKECASFWGISCHSLPLSYLGVPLGGNPKSNLFWRNVEDKIQKKLNNWKYAQISKGG 1521

Query: 1521 RLTLIKSTLSSLPIYQLSVFQAPSMTCKNIEKSWRKFLWKGNNGSVGSHLINWTKVSKSK 1537
            RLTLIKSTLSSLPIYQLSVFQAPS+TCKNIEK WRKFLWKGNNGS GSHLINWTKVSKSK
Sbjct: 1522 RLTLIKSTLSSLPIYQLSVFQAPSLTCKNIEKLWRKFLWKGNNGSEGSHLINWTKVSKSK 1581

[Close]

BLAST of IVF0006653 vs. NCBI nr
Match: TYK00493.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 2196 bits (5691), Expect = 0.0
Identity = 1132/1625 (69.66%), Postives = 1257/1625 (77.35%), Query Frame = 0


Query: 54   MAYFKSLPRSCKVERKEFVLHLDKYSKHTHYWLTETGAHKAFSIEVSPKDLDWIRCTLKS 113
            MAYFKSLPRSCK+ERKEFVL LDKY+KHTHYWLTETGAHKAFSIEVSP+DLDWIR TLKS
Sbjct: 1    MAYFKSLPRSCKIERKEFVLLLDKYAKHTHYWLTETGAHKAFSIEVSPRDLDWIRSTLKS 60

Query: 114  LIATPNTNRFFLETRDSEQCIWIRKTRNSKGCTAEIFRVDQKNRKSCILVPEGPEKSGWV 173
            LI TP++NRFFLE RD E CIWIRKTRN KGCTAEIFRVD KNRKSCILVPEG EKS WV
Sbjct: 61   LIETPSSNRFFLENRDYEHCIWIRKTRNGKGCTAEIFRVDHKNRKSCILVPEGLEKSCWV 120

Query: 174  SFLSMITPKVEVKAKTRPTFLPRSSPDGRLSPPIDYHKRSYARAVTEGRAT--SDSSDSY 233
            SFLSMITPKVEVKAKTRP FLPRSSP+ RLSPPIDYHKRSYA+AV+EGR++  SDSSDSY
Sbjct: 121  SFLSMITPKVEVKAKTRPIFLPRSSPEFRLSPPIDYHKRSYAKAVSEGRSSISSDSSDSY 180

Query: 234  DTSDSSHSSGNSFCDSPSSDLLENTVVIVRRFFHDDWHKILQNLRKQTEESFTYNAFHAE 293
             +SDSS SSGNS CDSP   LLENTVV+VRRFFHDDW KILQNLRKQTEESFTYNAFHAE
Sbjct: 181  ASSDSSQSSGNSPCDSPFPVLLENTVVLVRRFFHDDWQKILQNLRKQTEESFTYNAFHAE 240

Query: 294  KALVHFSSNIPANLLCQNKGWTTVGKYSVKFEKWSSAYHATPKLIPSYGGWTTFRGIPLH 353
            K LVHF+SN+PANLLCQNKGWTTVGKY+V+FEKW+ A HA+PKLIPSYGGWTTFRGIPLH
Sbjct: 241  KVLVHFNSNVPANLLCQNKGWTTVGKYTVRFEKWAPASHASPKLIPSYGGWTTFRGIPLH 300

Query: 354  LWNMTTFQQLGKACGGLIKVAEETRSAKNLVKARIKVRYNYSGFLPANVRIFDNEGNKFS 413
            LWNM TFQQ+GKACGGLIKVAEET++A+NL++A++K+RYNYSGFLPA V+IFD EGNKF 
Sbjct: 301  LWNMMTFQQIGKACGGLIKVAEETKTARNLIEAKLKIRYNYSGFLPAYVKIFDQEGNKFV 360

Query: 414  IQVVTHPEGKWLIERNVRLHGTFKRQAAAAFDEFNPESEQFFFEGMEAISPDFLSTSSDG 473
            +QVVTH EGKWL+ERNVRLHGTFKRQAAA+FD+FNP+SEQF F+G+EAISPD L+T S  
Sbjct: 361  VQVVTHSEGKWLMERNVRLHGTFKRQAAASFDDFNPDSEQFLFDGLEAISPDLLNTISGS 420

Query: 474  RKSNTPDQPPALKSVIIKSDRVATSPSFLNEEVVNDSNLHATANKSKSEILPGISNDGVL 533
            RKS +P+QP ALKSVIIK  + ATSP+ LNEEVVND++LHATANKSK +IL GISNDG L
Sbjct: 421  RKSISPEQPSALKSVIIKPAKYATSPTTLNEEVVNDNSLHATANKSKLKILSGISNDGSL 480

Query: 534  DKGKQKVDIQLQPNSALNLDKSKRKVSFNSPCNKTNIFNPDSAPANHSPSLSSPEKKQKV 593
            DKGKQKVDI  Q  SA    K KRKVSFNSP NKT  FNPDSAPANHSP     EKK++V
Sbjct: 481  DKGKQKVDIPSQLTSAFIFYKPKRKVSFNSPSNKTTFFNPDSAPANHSP-----EKKKRV 540

Query: 594  SRERN------------------------------------------------------- 653
            SRER+                                                       
Sbjct: 541  SRERSVKKKSSTIQPKLRANQGKGNLITQPLQVVAHDLDASKKGLSLTVDLGNLPVLDPS 600

Query: 654  -----HHSSDNAEVIDITNTEVVPETPEMKMQVNENSNSSSEANYRKPKHVHKRKYYYRK 713
                 HHSSDNAEVIDITNTEVVPETPE+KM   E SNSS E NYRK KH H+R++YYRK
Sbjct: 601  KSFEDHHSSDNAEVIDITNTEVVPETPELKMTDPEKSNSSPEVNYRKQKHSHRRRHYYRK 660

Query: 714  KEEKEKDPDSKAFKKQLASWLKENGLKISTVTDSSGATTSTNVLINQLNSG--------- 773
            KE+KEKD +S+AFK QL +WLKENGLK+S  TDSSGATTSTN L +QL S          
Sbjct: 661  KEDKEKDTNSEAFKNQLVTWLKENGLKLSIDTDSSGATTSTNALFSQLGSSAGGILILWD 720

Query: 774  -----LASKGIGALGTS--------------------------ILQNVEQFHHQQSS--- 833
                 L S+  G    S                          + +++   HH  SS   
Sbjct: 721  AQHHSLLSQEEGKFSLSANFSSFNNSWWLTGLYGPVKRRERLNVWEDLHNLHHLNSSPWI 780

Query: 834  --------------------DRSS----------------LINNRFTWSNLRNPPTFSRI 893
                                  SS                L NNR+TWSNLRNPPTFSR+
Sbjct: 781  IGGDLNVVRMREESTAVTFSSHSSNMLNDFISNNLLIDPPLTNNRYTWSNLRNPPTFSRL 840

Query: 894  DRFLYNSTWENLFSPHTTRTLPRSTSDHFPLVCENSNTKLSWGPVPFRLNSIALSDPEFK 953
            DRFLYNS WE LF+PH TRTLPR TSDHFPLVCE+S + L WGP PFRLNSIAL+DPEFK
Sbjct: 841  DRFLYNSRWEILFNPHITRTLPRPTSDHFPLVCEDSTSTLRWGPAPFRLNSIALNDPEFK 900

Query: 954  RNMGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTHAKDSILREVDSIDKKE 1013
            RNM RWWE S+Q+GHPGF FIQRLKSLAN IKPWQKEK  SLT AK++I+REVDSIDK E
Sbjct: 901  RNMERWWELSVQNGHPGFFFIQRLKSLANLIKPWQKEKFQSLTSAKENIIREVDSIDKNE 960

Query: 1014 LDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLREGDENSSFFHRICSSRQKR 1073
            LDTPL+ EESNRRLALKA+L++LSLKESQFW+QRAKKLWL+EGDENS+FFHRICSSRQKR
Sbjct: 961  LDTPLSLEESNRRLALKAELNDLSLKESQFWFQRAKKLWLKEGDENSAFFHRICSSRQKR 1020

Query: 1074 SFIHEIQDEEGLIQNTNISISTAFIKFFSKIYRSSTKSDPLFIDNLDWNPIEHSEWSHLC 1133
            + IHEIQDEEG IQNTN +IS AF+  FS+IYR STK DPLFI+NL+WNPI++S+WS LC
Sbjct: 1021 NLIHEIQDEEGSIQNTNNNISLAFVNHFSRIYRCSTKKDPLFIENLEWNPIDYSDWSLLC 1080

Query: 1134 APFLEDEIKGVINSLDGKKTPGLDGFPISFFKTYWYLLKEDILDIFKDFYDKGVINKNMN 1193
            APF E+EIKGVI S DG K PG DGFPISFFK+YW+LLKEDILDIFKDF++KGVINKNMN
Sbjct: 1081 APFSEEEIKGVIKSFDGNKAPGPDGFPISFFKSYWHLLKEDILDIFKDFFEKGVINKNMN 1140

Query: 1194 NTYIALIPKKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKTTLPDTISGNQLAFVKNRQ 1253
            NTYIALI KKKDYSHPKDFRPISLTTSIYK IAKTLSNRLK TLPDTISGNQLAF+KNRQ
Sbjct: 1141 NTYIALIEKKKDYSHPKDFRPISLTTSIYKTIAKTLSNRLKLTLPDTISGNQLAFIKNRQ 1200

Query: 1254 ITDAILMANEAVDFWKVKKIKGFILKLDIEKAFDKLNWDFIDFVLEKKNFPILWRKWIRG 1313
            ITDAILMANEA+D+WKVKKIKGFILKLDIEKAFD LNW+FID VL+K N+P  WRKWIRG
Sbjct: 1201 ITDAILMANEALDYWKVKKIKGFILKLDIEKAFDNLNWNFIDLVLKKNNYPNSWRKWIRG 1260

Query: 1314 CISNVTYSVIVNGRPQGRIKANRGLRQGDPLSPFLFVIAMDYLSRLLSHLESSGAIKGVS 1373
            CISNVTYS+IVNG+PQGRIKANRGLRQGDPLS FLFVIAMDYLSRLLSHLES+GAIKG  
Sbjct: 1261 CISNVTYSIIVNGKPQGRIKANRGLRQGDPLSLFLFVIAMDYLSRLLSHLESTGAIKG-- 1320

Query: 1374 LNSNCNISHILFADDILLFIEDNDYFLNNLRMALSLFERASSLKINLLKSALVPMNVSVN 1433
                                                                        
Sbjct: 1321 ------------------------------------------------------------ 1380

Query: 1434 RAKECASIWGIPCHSLPLSYLGVPLGGNPKSNLFWRNVEDKIQKKLNNWKYAQISKGGRL 1493
                     GI CH+LPL+YLGVPLGGNPKSNLFWRN+ED+IQKKL+NWKYA ISKGGRL
Sbjct: 1381 ---------GILCHTLPLTYLGVPLGGNPKSNLFWRNIEDRIQKKLSNWKYAHISKGGRL 1440

Query: 1494 TLIKSTLSSLPIYQLSVFQAPSMTCKNIEKSWRKFLWKGNNGSVGSHLINWTKVSKSKEE 1537
            TLIKSTLSSLPIY+LSVFQAPS T KNIEK WR FLWKG+ G  GSHLINW+ V+K KEE
Sbjct: 1441 TLIKSTLSSLPIYKLSVFQAPSSTYKNIEKLWRNFLWKGSCGLKGSHLINWSIVTKPKEE 1500

[Close]

BLAST of IVF0006653 vs. NCBI nr
Match: KAA0039309.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 1925 bits (4986), Expect = 0.0
Identity = 997/1387 (71.88%), Postives = 1108/1387 (79.88%), Query Frame = 0


Query: 54   MAYFKSLPRSCKVERKEFVLHLDKYSKHTHYWLTETGAHKAFSIEVSPKDLDWIRCTLKS 113
            MAYFKSLPRSCK+ERKEFVL LDKY+KHTHYWLTETGAHKAFSIEVSP+DLDWIR TLKS
Sbjct: 1    MAYFKSLPRSCKIERKEFVLLLDKYAKHTHYWLTETGAHKAFSIEVSPRDLDWIRSTLKS 60

Query: 114  LIATPNTNRFFLETRDSEQCIWIRKTRNSKGCTAEIFRVDQKNRKSCILVPEGPEKSGWV 173
            LI TP++NRFFLE RD E CIWIRKTRN KGCTAEIFRVD KNRKSCILVPEG EKS WV
Sbjct: 61   LIETPSSNRFFLENRDYEHCIWIRKTRNGKGCTAEIFRVDHKNRKSCILVPEGLEKSCWV 120

Query: 174  SFLSMITPKVEVKAKTRPTFLPRSSPDGRLSPPIDYHKRSYARAVTEGRAT--SDSSDSY 233
            SFLSMITPKVEVKAKTRP FLPRSSP+ RLSPPIDYHKRSYA+AV+EGR++  SDSSDSY
Sbjct: 121  SFLSMITPKVEVKAKTRPIFLPRSSPEFRLSPPIDYHKRSYAKAVSEGRSSISSDSSDSY 180

Query: 234  DTSDSSHSSGNSFCDSPSSDLLENTVVIVRRFFHDDWHKILQNLRKQTEESFTYNAFHAE 293
             +SDSS SSGNS CDSP   LLENTVV+VRRFFHDDW KILQNLRKQTEESFTYNAFHAE
Sbjct: 181  ASSDSSQSSGNSPCDSPFPVLLENTVVLVRRFFHDDWQKILQNLRKQTEESFTYNAFHAE 240

Query: 294  KALVHFSSNIPANLLCQNKGWTTVGKYSVKFEKWSSAYHATPKLIPSYGGWTTFRGIPLH 353
            K LVHF+SN+PANLLCQNKGWTTVGKY+V+FEKW+ A HA+PKLIPSYGGWTTFRGIPLH
Sbjct: 241  KVLVHFNSNVPANLLCQNKGWTTVGKYTVRFEKWAPASHASPKLIPSYGGWTTFRGIPLH 300

Query: 354  LWNMTTFQQLGKACGGLIKVAEETRSAKNLVKARIKVRYNYSGFLPANVRIFDNEGNKFS 413
            LWNM TFQQ+GKACGGLIKVAEET++A+NL++A++K+RYNYSGFLPA V+IFD EGNKF 
Sbjct: 301  LWNMMTFQQIGKACGGLIKVAEETKTARNLIEAKLKIRYNYSGFLPAYVKIFDQEGNKFV 360

Query: 414  IQVVTHPEGKWLIERNVRLHGTFKRQAAAAFDEFNPESEQFFFEGMEAISPDFLSTSSDG 473
            +QVVTH EGKWL+ERNVRLHGTFKRQAAA+FD+FNP+SEQF F+G+EAISPD L+T S  
Sbjct: 361  VQVVTHSEGKWLMERNVRLHGTFKRQAAASFDDFNPDSEQFLFDGLEAISPDLLNTISGS 420

Query: 474  RKSNTPDQPPALKSVIIKSDRVATSPSFLNEEVVNDSNLHATANKSKSEILPGISNDGVL 533
            RKS +P+QP ALKSVIIK  + ATSP+ LNEEVVND++LHATANKSK +IL GISNDG L
Sbjct: 421  RKSISPEQPSALKSVIIKPAKYATSPTTLNEEVVNDNSLHATANKSKLKILSGISNDGSL 480

Query: 534  DKGKQKVDIQLQPNSALNLDKSKRKVSFNSPCNKTNIFNPDSAPANHSPSLSSPEKKQKV 593
            DKGKQKVDI  Q  SA    K KRKVSFNSP NKT  FNPDSAPANHSP     EKK++V
Sbjct: 481  DKGKQKVDIPSQLTSAFIFYKPKRKVSFNSPSNKTTFFNPDSAPANHSP-----EKKKRV 540

Query: 594  SRERN------------------------------------------------------- 653
            SRER+                                                       
Sbjct: 541  SRERSVKKKSSTIQPKLRANQGKGNLITQPLQVVAHDLDASKKGLSLTVDLGNLPVLDPS 600

Query: 654  -----HHSSDNAEVIDITNTEVVPETPEMKMQVNENSNSSSEANYRKPKHVHKRKYYYRK 713
                 HHSSDNAEVIDITNTEVVPETPE+KM   E SNSS E NYRK KH H+R++YYRK
Sbjct: 601  KSFEDHHSSDNAEVIDITNTEVVPETPELKMTDPEKSNSSPEVNYRKQKHSHRRRHYYRK 660

Query: 714  KEEKEKDPDSKAFKKQLASWLKENGLKISTVTDSSGATTSTNVLINQLNSG--------- 773
            KE+KEKD +S+AFK QL +WLKENGLK+S  TDSSGATTSTN L +QL S          
Sbjct: 661  KEDKEKDTNSEAFKNQLVTWLKENGLKLSIDTDSSGATTSTNALFSQLGSSAGGILILWD 720

Query: 774  -----LASKGIGALGTS--------------------------ILQNVEQFHHQQSS--- 833
                 L S+  G    S                          + +++   HH  SS   
Sbjct: 721  AQHHSLLSQEEGKFSLSANFSSFNNSWWLTGLYGPVKRRERLNVWEDLHNLHHLNSSPWI 780

Query: 834  --------------------DRSS----------------LINNRFTWSNLRNPPTFSRI 893
                                  SS                L NNR+TWSNLRNPPTFSR+
Sbjct: 781  IGGDLNVVRMREESTAVTFSSHSSNMLNDFISNNLLIDPPLTNNRYTWSNLRNPPTFSRL 840

Query: 894  DRFLYNSTWENLFSPHTTRTLPRSTSDHFPLVCENSNTKLSWGPVPFRLNSIALSDPEFK 953
            DRFLYNS WE LF+PH TRTLPR TSDHFPLVCE+S + L WGP PFRLNSIAL+DPEFK
Sbjct: 841  DRFLYNSRWEILFNPHITRTLPRPTSDHFPLVCEDSTSTLRWGPAPFRLNSIALNDPEFK 900

Query: 954  RNMGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTHAKDSILREVDSIDKKE 1013
            RNM RWWE S+Q+GHPGF FIQRLKSLAN IKPWQKEK  SLT AK++I+REVDSIDK E
Sbjct: 901  RNMERWWELSVQNGHPGFFFIQRLKSLANLIKPWQKEKFQSLTSAKENIIREVDSIDKNE 960

Query: 1014 LDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLREGDENSSFFHRICSSRQKR 1073
            LDTPL+ EESNRRLALKA+L++LSLKESQFW+QRAKKLWL+EGDENS+FFHRICSSRQKR
Sbjct: 961  LDTPLSLEESNRRLALKAELNDLSLKESQFWFQRAKKLWLKEGDENSAFFHRICSSRQKR 1020

Query: 1074 SFIHEIQDEEGLIQNTNISISTAFIKFFSKIYRSSTKSDPLFIDNLDWNPIEHSEWSHLC 1133
            + IHEIQDEEG IQNTN +IS AF+  FS+IYR STK DPLFI+NL+WNPI++S+WS LC
Sbjct: 1021 NLIHEIQDEEGSIQNTNNNISLAFVNHFSRIYRCSTKKDPLFIENLEWNPIDYSDWSLLC 1080

Query: 1134 APFLEDEIKGVINSLDGKKTPGLDGFPISFFKTYWYLLKEDILDIFKDFYDKGVINKNMN 1193
            APF E+EIKGVI S DG K PG DGFPISFFK+YW+LLKEDILDIFKDF++KGVINKNMN
Sbjct: 1081 APFSEEEIKGVIKSFDGNKAPGPDGFPISFFKSYWHLLKEDILDIFKDFFEKGVINKNMN 1140

Query: 1194 NTYIALIPKKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKTTLPDTISGNQLAFVKNRQ 1253
            NTYIALI KKKDYSHPKDFRPISLTTSIYK IAKTLSNRLK TLPDTISGNQLAF+KNRQ
Sbjct: 1141 NTYIALIEKKKDYSHPKDFRPISLTTSIYKTIAKTLSNRLKLTLPDTISGNQLAFIKNRQ 1200

Query: 1254 ITDAILMANEAVDFWKVKKIKGFILKLDIEKAFDKLNWDFIDFVLEKKNFPILWRKWIRG 1299
            ITDAILMANEA+D+WKVKKIKGFILKLDIEKAFD LNW+FID VL+K N+P  WRKWIRG
Sbjct: 1201 ITDAILMANEALDYWKVKKIKGFILKLDIEKAFDNLNWNFIDLVLKKNNYPNSWRKWIRG 1260

[Close]

BLAST of IVF0006653 vs. NCBI nr
Match: TYK05808.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 1885 bits (4884), Expect = 0.0
Identity = 1016/1582 (64.22%), Postives = 1131/1582 (71.49%), Query Frame = 0


Query: 54   MAYFKSLPRSCKVERKEFVLHLDKYSKHTHYWLTETGAHKAFSIEVSPKDLDWIRCTLKS 113
            MAYFKSLPRSCK+ERKEFVL LDKY+KHTHYWLTETGAHKAFSIEVSP+DLDWIR TLKS
Sbjct: 1    MAYFKSLPRSCKIERKEFVLLLDKYAKHTHYWLTETGAHKAFSIEVSPRDLDWIRSTLKS 60

Query: 114  LIATPNTNRFFLETRDSEQCIWIRKTRNSKGCTAEIFRVDQKNRKSCILVPEGPEKSGWV 173
            LI TP++NRFFLE RD E CIWIRKTRN KGCTAEIFRVD KNRKSCILVPEGPEKSG V
Sbjct: 61   LIETPSSNRFFLENRDYEHCIWIRKTRNGKGCTAEIFRVDHKNRKSCILVPEGPEKSGRV 120

Query: 174  SFLSMITPKVEVKAKTRPTFLPRSSPDGRLSPPIDYHKRSYARAVTEGRAT--SDSSDSY 233
            SFLSMITPKVEVKAKTRPTFLPRSSP+ RLSPPIDYHKRSY +AV++GR++  SDSSDSY
Sbjct: 121  SFLSMITPKVEVKAKTRPTFLPRSSPEFRLSPPIDYHKRSYEKAVSKGRSSISSDSSDSY 180

Query: 234  DTSDSSHSSGNSFCDSPSSDLLENTVVIVRRFFHDDWHKILQNLRKQTEESFTYNAFHAE 293
             +SDSS SSGNS CDSP   LLENTVV+                                
Sbjct: 181  TSSDSSQSSGNSPCDSPFPVLLENTVVL-------------------------------- 240

Query: 294  KALVHFSSNIPANLLCQNKGWTTVGKYSVKFEKWSSAYHATPKLIPSYGGWTTFRGIPLH 353
             AL+HF+SN+PANLLCQNKGWTTV KY V+                              
Sbjct: 241  -ALIHFNSNVPANLLCQNKGWTTVEKYMVR------------------------------ 300

Query: 354  LWNMTTFQQLGKACGGLIKVAEETRSAKNLVKARIKVRYNYSGFLPANVRIFDNEGNKFS 413
                                       K+L                              
Sbjct: 301  ---------------------------KSL------------------------------ 360

Query: 414  IQVVTHPEGKWLIERNVRLHGTFKRQAAAAFDEFNPESEQFFFEGMEAISPDFLSTSSDG 473
                                                      F+G+EAISPD L+T S  
Sbjct: 361  ------------------------------------------FDGLEAISPDLLNTISGS 420

Query: 474  RKSNTPDQPPALKSVIIKSDRVATSPSFLNEEVVNDSNLHATANKSKSEILPGISNDGVL 533
            RKSN+ +QP ALKSVIIK  R ATSP+ LNEEVVND++LHAT  KS+ +IL GISNDG L
Sbjct: 421  RKSNSREQPSALKSVIIKPARDATSPTTLNEEVVNDNSLHATTIKSELKILSGISNDGSL 480

Query: 534  DKGKQKVDIQLQPNSALNLDKSKRKVSFNSPCNKTNIFNPDSAPANHSPSLSSPEKKQKV 593
            DKGKQKVDI  Q  SA   DK KRKVSFNSP NKT  FN DSAP NHSP LSSPEKKQ+V
Sbjct: 481  DKGKQKVDIPSQLTSAFIYDKPKRKVSFNSPSNKTTFFNSDSAPTNHSPPLSSPEKKQRV 540

Query: 594  SRERN------------------------------------------------------- 653
            SRER+                                                       
Sbjct: 541  SRERSVKKKSSTIQPKSRANQGKGELITQPLQVVAHDLDASKKGLSLTVDLGNLPVLDPS 600

Query: 654  -----HHSSDNAEVIDITNTEVVPETPEMKMQVNENSNSSSEANYRKPKHVHKRKYYYRK 713
                 HHSSDNAEVIDITNTEVVPETPE+KM   E SNSS E NYRK KH H+R++YYRK
Sbjct: 601  KSFEDHHSSDNAEVIDITNTEVVPETPELKMTDPEKSNSSPEVNYRKQKHSHRRRHYYRK 660

Query: 714  KEEKEKDPDSKAFKKQLASWLKENGLKISTVTDSSGATTSTNVLINQLNSGLASKGIGAL 773
            KE+KEKD +S+AFK QL +WLKENGLK+ST TDSSGATTSTN L +QL S ++     A+
Sbjct: 661  KEDKEKDTNSEAFKNQLVTWLKENGLKLSTDTDSSGATTSTNALFSQLGSSISWIVKNAI 720

Query: 774  GTS--ILQNVEQFHHQ------------------QSSDRSS----------------LIN 833
             +S  IL   +  HH                    SS  SS                L N
Sbjct: 721  DSSGGILILWDAQHHSLLRGDLNVVRMREESTAVTSSSHSSNMLNNFISNNLLIDPPLTN 780

Query: 834  NRFTWSNLRNPPTFSRIDRFLYNSTWENLFSPHTTRTLPRSTSDHFPLVCENSNTKLSWG 893
            NR+TWSNLRNPPTFSR+DRFLYNS WE LF+PH TRTL R TSDHFPLVCE+S + L WG
Sbjct: 781  NRYTWSNLRNPPTFSRLDRFLYNSRWETLFNPHITRTLSRPTSDHFPLVCEDSTSTLRWG 840

Query: 894  PVPFRLNSIALSDPEFKRNMGRWWENSIQDGHPGFSFIQRLKSLANFIKPWQKEKLHSLT 953
            P PFRLNSIAL+DP+FKRNM RWWE S+Q+GHPGFSFI+RLKSLAN IKPWQKEK HSLT
Sbjct: 841  PAPFRLNSIALNDPKFKRNMERWWELSVQNGHPGFSFIRRLKSLANLIKPWQKEKFHSLT 900

Query: 954  HAKDSILREVDSIDKKELDTPLTQEESNRRLALKADLSELSLKESQFWYQRAKKLWLREG 1013
             AK++I+REVDSIDK ELDTPL+QEESNRRLALKA+LS+LSLKESQFW+QRAKKLWL+EG
Sbjct: 901  SAKENIIREVDSIDKNELDTPLSQEESNRRLALKAELSDLSLKESQFWFQRAKKLWLKEG 960

Query: 1014 DENSSFFHRICSSRQKRSFIHEIQDEEGLIQNTNISISTAFIKFFSKIYRSSTKSDPLFI 1073
            DENS+FFHRICSSRQKR+ IHEIQDEEG IQNTN +IS AF+  FS IYR STK DPLFI
Sbjct: 961  DENSAFFHRICSSRQKRNLIHEIQDEEGSIQNTNNNISLAFVNHFSSIYRCSTKKDPLFI 1020

Query: 1074 DNLDWNPIEHSEWSHLCAPFLEDEIKGVINSLDGKKTPGLDGFPISFFKTYWYLLKEDIL 1133
            +NL+WNPI++S+WS LCAPFLE+EIKGVI S DG K PG DGFPISFFK+YW+LLKEDIL
Sbjct: 1021 ENLEWNPIDYSDWSLLCAPFLEEEIKGVIKSFDGNKAPGPDGFPISFFKSYWHLLKEDIL 1080

Query: 1134 DIFKDFYDKGVINKNMNNTYIALIPKKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKTT 1193
            DIFKDF++KG                                     IIAKTLSNRLK T
Sbjct: 1081 DIFKDFFEKG-------------------------------------IIAKTLSNRLKLT 1140

Query: 1194 LPDTISGNQLAFVKNRQITDAILMANEAVDFWKVKKIKGFILKLDIEKAFDKLNWDFIDF 1253
            LPDTISGNQLAF+KNRQITDAIL ANEA+D+WKVKKIK FILKLDIEKAFD LNWDFIDF
Sbjct: 1141 LPDTISGNQLAFIKNRQITDAILRANEALDYWKVKKIKSFILKLDIEKAFDNLNWDFIDF 1200

Query: 1254 VLEKKNFPILWRKWIRGCISNVTYSVIVNGRPQGRIKANRGLRQGDPLSPFLFVIAMDYL 1313
            VL+KKN+P  WRKWIRGCISNVTYS+IVN +PQ RIKANRGLRQGDPLSPFLFV AMDYL
Sbjct: 1201 VLKKKNYPNSWRKWIRGCISNVTYSIIVNEKPQDRIKANRGLRQGDPLSPFLFVSAMDYL 1260

Query: 1314 SRLLSHLESSGAIKGVSLNSNCNISHILFADDILLFIEDNDYFLNNLRMALSLFERASSL 1373
            SRLLSHLESSGAIKGV L ++CNISHILFADDILLF+EDND+FLNNLRMALSLFE+AS L
Sbjct: 1261 SRLLSHLESSGAIKGVCLANDCNISHILFADDILLFVEDNDHFLNNLRMALSLFEKASGL 1320

Query: 1374 KINLLKSALVPMNVSVNRAKECASIWGIPCHSLPLSYLGVPLGGNPKSNLFWRNVEDKIQ 1433
            KINL KSA+VP+NVS +RA ECAS WGI CH+LPL+YLGVPLGGNPKSN+FWRN+ED+IQ
Sbjct: 1321 KINLSKSAMVPVNVSWSRALECASSWGISCHTLPLTYLGVPLGGNPKSNIFWRNIEDRIQ 1380

Query: 1434 KKLNNWKYAQISKGGRLTLIKSTLSSLPIYQLSVFQAPSMTCKNIEKSWRKFLWKGNNGS 1493
            KKLNNWKYA ISKGGRLTLIKSTLSSL IYQLSVFQAP  T KNIEK WR FLWKG+ G 
Sbjct: 1381 KKLNNWKYAHISKGGRLTLIKSTLSSLSIYQLSVFQAPPSTYKNIEKLWRNFLWKGSFGL 1383

Query: 1494 VGSHLINWTKVSKSKEEGGLGTSRLHVTNKALLTKWLWRYLSEPNALWRRLIQCKYKGNY 1537
             GSHLINW+ V+K KEEGGLG SRL V N+ALL+KWLWRY SEPN+LWRRLI  KYKG +
Sbjct: 1441 KGSHLINWSIVTKLKEEGGLGISRLQVINQALLSKWLWRYYSEPNSLWRRLIHIKYKGKH 1383

[Close]

BLAST of IVF0006653 vs. NCBI nr
Match: KAA0058980.1 (uncharacterized protein E6C27_scaffold98G001710 [Cucumis melo var. makuwa])

HSP 1 Score: 1691 bits (4380), Expect = 0.0
Identity = 953/1539 (61.92%), Postives = 1029/1539 (66.86%), Query Frame = 0


Query: 178  MITPKVEVKAKTRPTFLPRSSPDGRLSPPIDYHKRSYARAVTEGR--ATSDSSDSYDTSD 237
            MITPKVEVK KTRPTFLPRSSP+ RLSPPIDYHKRSYA+ VTEGR   TSDSSDSY +SD
Sbjct: 1    MITPKVEVKEKTRPTFLPRSSPEYRLSPPIDYHKRSYAKVVTEGRPFTTSDSSDSYVSSD 60

Query: 238  SSHSSGNSFCDSPSSDLLENTVVIVRRFFHDDWHKILQNLRKQTEESFTYNAFHAEKALV 297
            SSHSSGNSFCDSPS DLLENTVV+VRRFFHDDW KILQNLRKQTEESFTYNAFHAEKALV
Sbjct: 61   SSHSSGNSFCDSPSPDLLENTVVLVRRFFHDDWQKILQNLRKQTEESFTYNAFHAEKALV 120

Query: 298  HFSSNIPANLLCQNKGWTTVGKYSVKFEKWSSAYHATPKLIPSYGGWTTFRGIPLHLWNM 357
            HF+SNIP NLLCQNKGWTTVGKYSV+FEKWS AYHATPKLIPSYGGWTTF+         
Sbjct: 121  HFNSNIPENLLCQNKGWTTVGKYSVRFEKWSPAYHATPKLIPSYGGWTTFQ--------- 180

Query: 358  TTFQQLGKACGGLIKVAEETRSAKNLVKARIKVRYNYSGFLPANVRIFDNEGNKFSIQVV 417
                                R++  LV+                                
Sbjct: 181  --------------------RNSATLVE-------------------------------- 240

Query: 418  THPEGKWLIERNVRLHGTFKRQAAAAFDEFNPESEQF----FFEGMEAISPDFLSTSSDG 477
                                      +D+F+   E       F+G EAISPDFLSTSS  
Sbjct: 241  --------------------------YDDFSTNCESLRRIILFDGSEAISPDFLSTSSRS 300

Query: 478  RKSNTPDQPPALKSVIIKSDRVATSPSFLNEEVVNDSNLHATANKSKSEILPGISNDGVL 537
            RKS+TPDQP ALKSVIIK D+ ATSP++LNEEVVNDSNLHATANKS+ EIL GI NDGVL
Sbjct: 301  RKSSTPDQPSALKSVIIKPDKAATSPTYLNEEVVNDSNLHATANKSRLEILSGIPNDGVL 360

Query: 538  DKGKQKVDIQLQPNSALNLDKSKRKVSFNSPCNKTNIFNPDSAPANHSPSLSSPEKKQKV 597
            DKGKQKVDIQL PNSALNL+K KRKVSFNSP NKTNIFNPDSAPANHS SLSSPEKKQKV
Sbjct: 361  DKGKQKVDIQLHPNSALNLNKPKRKVSFNSPSNKTNIFNPDSAPANHSLSLSSPEKKQKV 420

Query: 598  SRERN------------------------------------------------------- 657
            SRER+                                                       
Sbjct: 421  SRERSIKKKSSSIQPIQNKGVLITQPIQVVAHDLEASKKGLSLIVNLGDLPVLDPSKSFE 480

Query: 658  -HHSSDNAEVIDITNTEVVPETPEMKMQVNENSNSSSEANYRKPKHVHKRKYYYRKKEEK 717
             HHSS NAEVIDITNTEVVPETPEMKM VNENSNSSSEANYRKPKHVH+R+YYYRKK  K
Sbjct: 481  DHHSSHNAEVIDITNTEVVPETPEMKMPVNENSNSSSEANYRKPKHVHRRRYYYRKKRSK 540

Query: 718  EKDPDSKA--------FKKQLASW---------------------------LKENGLKIS 777
             +    +          K +L +W                           L E  LKI+
Sbjct: 541  GEGSGLRGEWGSGDIYCKMKLLTWNARGLGSPSKRALIKNAIISYSPDFVILTETMLKIT 600

Query: 778  T----------------VTDSSGATTSTNVLINQLNSGLASK--GIGALGTSILQNVEQ- 837
                             V ++SG++    +L +  +  L S+   I +L  +   N    
Sbjct: 601  NKRIIKSFWPSNSINWIVKNASGSSGGILILWDAQSHSLLSQEEAIFSLSANFFLNNNSS 660

Query: 838  ---------------------FHHQQ--------------------------SSDRSS-- 897
                                  H+ Q                          SS  SS  
Sbjct: 661  WWLTGLYGPDKRRKRIHFWADLHNLQHLNSFPWSLERDLNVIRMREETTSILSSSHSSRM 720

Query: 898  --------------LINNRFTWSNLRNPPTFSRIDRFLYNSTWENLFSPHTTRTLPRSTS 957
                          L NNRFTWSNLRNP TFSRIDRFLYNS+WENLFSPHTTRTLPR TS
Sbjct: 721  LNNFISNNLLIDPPLTNNRFTWSNLRNPSTFSRIDRFLYNSSWENLFSPHTTRTLPRPTS 780

Query: 958  DHFPLVCENSNTKLSWGPVPFRLNSIALSDPEFKRNMGRWWENSIQDGHPGFSFIQRLKS 1017
            DHFPLVCE+SN KL WGP PFRLNSIAL+DPEFKRNM RWWENS+Q+GHPGFSFIQRLKS
Sbjct: 781  DHFPLVCEDSNPKLRWGPAPFRLNSIALNDPEFKRNMERWWENSVQNGHPGFSFIQRLKS 840

Query: 1018 LANFIKPWQKEKLHSLTHAKDSILREVDSIDKKELDTPLTQEESNRRLALKADLSELSLK 1077
            LAN IKPWQKEKLHSL +AK++I+REVDSIDKKELDTPL+Q+ESNRRLALKA+LS+LSLK
Sbjct: 841  LANHIKPWQKEKLHSLNYAKETIIREVDSIDKKELDTPLSQKESNRRLALKAELSDLSLK 900

Query: 1078 ESQFWYQRAKKLWLREGDENSSFFHRICSSRQKRSFIHEIQDEEGLIQNTNISISTAFIK 1137
            ESQF                       C                                
Sbjct: 901  ESQF-----------------------C-------------------------------- 960

Query: 1138 FFSKIYRSSTKSDPLFIDNLDWNPIEHSEWSHLCAPFLEDEIKGVINSLDGKKTPGLDGF 1197
                IY+SSTKSDPLFI+NLDWNPIE SEW HLCAPFLE+EIKGVINS DGKK P  DGF
Sbjct: 961  ----IYKSSTKSDPLFIENLDWNPIEFSEWPHLCAPFLEEEIKGVINSFDGKKAPSPDGF 1020

Query: 1198 PISFFKTYWYLLKEDILDIFKDFYDKGVINKNMNNTYIALIPKKKDYSHPKDFRPISLTT 1257
            PISFFK+YW+LLKEDI+DIFKDF++KGVINKNMNNTYIALI KKKDYSHPKDFRPISLTT
Sbjct: 1021 PISFFKSYWHLLKEDIMDIFKDFFEKGVINKNMNNTYIALIGKKKDYSHPKDFRPISLTT 1080

Query: 1258 SIYKIIAKTLSNRLKTTLPDTISGNQLAFVKNRQITDAILMANEAVDFWKVKKIKGFILK 1317
            SIYKIIAKTLSNRLKTTLP TISGNQLAF+KNRQITDAILMANEAVD+WKVKKIKGFILK
Sbjct: 1081 SIYKIIAKTLSNRLKTTLPGTISGNQLAFIKNRQITDAILMANEAVDYWKVKKIKGFILK 1140

Query: 1318 LDIEKAFDKLNWDFIDFVLEKKNFPILWRKWIRGCISNVTYSVIVNGRPQGRIKANRGLR 1377
            LDIEK F  LNWDFID+VL KKNFP  WRKWIRGCISNVTYSVI+NGRPQGRIKANRGLR
Sbjct: 1141 LDIEKVFYNLNWDFIDYVLGKKNFPNSWRKWIRGCISNVTYSVIINGRPQGRIKANRGLR 1200

Query: 1378 QGDPLSPFLFVIAMDYLSRLLSHLESSGAIKGVSLNSNCNISHILFADDILLFIEDNDYF 1437
            QGDPLSPFLFVIAMDY SRLLSHLE+SGAIKGVSLN+NCNISHILFADDILLF+EDND F
Sbjct: 1201 QGDPLSPFLFVIAMDYFSRLLSHLEASGAIKGVSLNNNCNISHILFADDILLFVEDNDCF 1260

Query: 1438 LNNLRMALSLFERASSLKINLLKSALVPMNVSVNRAKECASIWGIPCHSLPLSYLGVPLG 1497
            LNNL MALSLFE+AS LKINLLKSALVP+NVS+NRAKECAS WGI CHSL LSYLGVPLG
Sbjct: 1261 LNNLIMALSLFEKASGLKINLLKSALVPVNVSLNRAKECASFWGISCHSLLLSYLGVPLG 1320

Query: 1498 GNPKSNLFWRNVEDKIQKKLNNWKYAQISKGGRLTLIKSTLSSLPIYQLSVFQAPSMTCK 1537
            G+                                                          
Sbjct: 1321 GS---------------------------------------------------------- 1321

[Close]

BLAST of IVF0006653 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 1.6e-25
Identity = 101/387 (26.10%), Postives = 175/387 (45.22%), Query Frame = 0


Query: 711  LGTSI-LQNVEQFHH-QQSSDRSSLINN--RFTWSNLRNP-PTFSRIDRFLYNSTWENLF 770
            L TSI ++ +E+F +  + SD   + +    +TWSN ++  P   ++DR + N  W + F
Sbjct: 240  LQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPIIRKLDRAIANGDWFSSF 299

Query: 771  SPHTTRTLPRSTSDHFP--LVCENSNTKLSWGPVPFRLNSIALSDPEFKRNMGRWWENSI 830
                        SDH P  ++ EN   +       FR  S   + P F  ++   WE  I
Sbjct: 300  PSAIAVFELSGVSDHSPCIIILENLPKR---SKKCFRYFSFLSTHPTFLVSLTVAWEEQI 359

Query: 831  QDGHPGFSFIQRLKSLANFIKPWQKEKLHSLTHAKDSILREVDSIDKKELDTPLTQEESN 890
              G   FS  + LK+     K   ++   ++ H     L  ++SI  + L  P       
Sbjct: 360  PVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEALDSLESIQSQLLTNPSDSLFRV 419

Query: 891  RRLALKADLSELSLKESQFWYQRAKKLWLREGDENSSFFHRICSSRQKRSFIHEIQDEEG 950
              +A K      +  ES F+ Q+++  WL++GD N+ FFH++  + Q ++ I  ++ ++ 
Sbjct: 420  EHVARKKWNFFAAALES-FYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDD 479

Query: 951  LIQNTNISISTAFIKFFSKIYRSSTKSDPLFIDNL----DWNPIEHSEW--SHLCAPFLE 1010
            +       +    + +++ +  S   SD L  D++    D +P   ++   S L A   +
Sbjct: 480  VRVENVTQVKEMIVAYYTHLLGSD--SDILTPDSVQRIKDIHPFRCNDTLASRLSALPSD 539

Query: 1011 DEIKGVINSLDGKKTPGLDGFPISFFKTYWYLLKEDILDIFKDFYDKGVINKNMNNTYIA 1070
             EI   + ++   K PG D F   FF   W+++K+  +   K+F+  G + K  N T I 
Sbjct: 540  KEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAIT 599

Query: 1071 LIPKKKDYSHPKDFRPISLTTSIYKII 1085
            LIPK         FRP+S  T +YKII
Sbjct: 600  LIPKVTGVDQLSMFRPVSCCTVVYKII 620

[Close]

BLAST of IVF0006653 vs. TAIR 10
Match: AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 85.1 bits (209), Expect = 5.3e-16
Identity = 56/212 (26.42%), Postives = 86/212 (40.57%), Query Frame = 0


Query: 1307 SLPLSYLGVPLGGNPKSNLFWRNVEDKIQKKLNNWKYAQISKGGRLTLIKSTLSSLPIYQ 1366
            +LP+ YLG+PL     +   +  + +KI+ ++  W    +S  GRL LI S + SL  + 
Sbjct: 22   ALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISSVIHSLTNFW 81

Query: 1367 LSVFQAPSMTCKNIEKSWRKFLWKGNNGSVGSHLINWTKVSKSKEEGGLGTSRLHVTNK- 1426
            +S F+ PS   K I+     FLW G   +     + W+ V   K+EGGLG   L   NK 
Sbjct: 82   MSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGIRSLKEANKG 141

Query: 1427 --------ALLTKWLWRYLSEPNALWRRLIQCKYKGNYPGDIPSNISSITSKAPWRSIID 1486
                      L  W+W+ + +  AL    ++                             
Sbjct: 142  SFWSISGNTTLGSWMWKKILKHRALASGFVK----------------------------- 194

Query: 1487 NIDWFKSNQSWELNNGDQISFWYSNWSLEGRL 1510
                       +++NG   SFW+ NWS  GRL
Sbjct: 202  ----------HDIHNGSNTSFWFDNWSKIGRL 194

[Close]

BLAST of IVF0006653 vs. TAIR 10
Match: ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )

HSP 1 Score: 72.0 bits (175), Expect = 4.7e-12
Identity = 32/67 (47.76%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 1182 IVNGRPQGRIKANRGLRQGDPLSPFLFVIAMDYLSRLLSHLESSGAIKGVSLNSNC-NIS 1241
            I+NG PQG +  +RGLRQGDPLSP+LF++  + LS L    +  G + G+ +++N   I+
Sbjct: 13   IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72

Query: 1242 HILFADD 1248
            H+LFADD
Sbjct: 73   HLLFADD 79

[Close]

BLAST of IVF0006653 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.0e-11
Identity = 47/162 (29.01%), Postives = 73/162 (45.06%), Query Frame = 0


Query: 1361 SLPIYQLSVFQAPSMTCKNIEKSWRKFLWKGNNGSVGSHLINWTKVSKSKEEGGLGTSRL 1420
            +LP Y ++ F  P   CK I      F W+    + G H   W  +S  K EGG+G   +
Sbjct: 2    ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61

Query: 1421 HVTNKALLTKWLWRYLSEPNALWRRLIQCKY-----KGNYP-GDIPSNISSITSKAPWRS 1480
               N ALL K +WR LS P +L  ++ + +Y       N P G  PS +        W+S
Sbjct: 62   EAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFV--------WKS 121

Query: 1481 IIDNIDWFKSNQSWELNNGDQISFWYSNWSLEGRLSTAYPRL 1517
            I  + +  +      + NG+ I  W   W L+ + ++A  R+
Sbjct: 122  IHASQEILRQGARAVVGNGEDIIIWRHKW-LDSKPASAALRM 154

[Close]

BLAST of IVF0006653 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 67.0 bits (162), Expect = 1.5e-10
Identity = 42/148 (28.38%), Postives = 68/148 (45.95%), Query Frame = 0


Query: 1361 SLPIYQLSVFQAPSMTCKNIEKSWRKFLWKGNNGSVGSHLINWTKVSKSKE-EGGLGTSR 1420
            +LP+Y +S F+   + CK +  +  +F W           + W K+ KSKE +GGLG   
Sbjct: 2    ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 1421 LHVTNKALLTKWLWRYLSEPNALWRRLIQCKYKGNYPGDIPSNISSITSKA-PWRSIIDN 1480
            L   N+ALL K  +R + +P+ L  RL++ +Y   +P       S  T  +  WRSII  
Sbjct: 62   LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRY---FPHSSMMECSVGTRPSYAWRSIIHG 121

Query: 1481 IDWFKSNQSWELNNGDQISFWYSNWSLE 1507
             +         + +G     W   W ++
Sbjct: 122  RELLSRGLLRTIGDGIHTKVWLDRWIMD 146

The following BLAST results are available for this feature:

BLAST of IVF0006653 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11369	2.7e-49	24.47	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE...	[more]
O00370	1.4e-48	25.86	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1	[more]
P08548	3.7e-46	25.75	LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1	[more]
P14381	2.2e-35	23.78	Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV...	[more]
P0C2F6	4.8e-22	32.95	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of IVF0006653 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BLV7	0.0e+00	78.30	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5D3BL61	0.0e+00	69.66	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7TDG1	0.0e+00	71.88	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5D3C3M3	0.0e+00	64.10	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7UV84	0.0e+00	61.92	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of IVF0006653 vs. NCBI nr


Match Name	Identity	Description
TYJ99315.1	78.30	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
TYK00493.1	69.66	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
KAA0039309.1	71.88	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
TYK05808.1	64.22	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
KAA0058980.1	61.92	uncharacterized protein E6C27_scaffold98G001710 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0006653 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43760.1	1.6e-25	26.10	DNAse I-like superfamily protein	[more]
AT3G24255.1	5.3e-16	26.42	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
ATMG01250.1	4.7e-12	47.76	RNA-directed DNA polymerase (reverse transcriptase)	[more]
AT4G29090.1	1.0e-11	29.01	Ribonuclease H-like superfamily protein	[more]
ATMG00310.1	1.5e-10	28.38	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 282..388 e-value: 1.2E-14 score: 54.0
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 1059..1317 e-value: 1.4E-44 score: 152.3
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1040..1317 score: 18.24366
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 587..602
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 621..635
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 559..643
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..248
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 559..586
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..248
None	No IPR available	PANTHER	PTHR33116:SF38	OS01G0158850 PROTEIN	coord: 739..1446
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 739..1446
None	No IPR available	CDD	cd01650	RT_nLTR_like	coord: 1054..1317 e-value: 2.79613E-55 score: 190.195
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1002..1286
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 734..786

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0006653.1	IVF0006653.1	mRNA