IVF0006580 (gene) Melon (IVF77) v1

Overview


Name	IVF0006580
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr11: 12282924 .. 12283566 (+)
RNA-Seq Expression	IVF0006580
Synteny	IVF0006580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCATCCCATTCTCTCTCTTCCCTTCATTTCCTTCTTCAAAACCCCCCATTAGTTTATTCCCTCTTCCTCCCTTAGGATCTACAGCCCAAGAAAAAACTAATACACACATACACACACACCCATATATATACACACATCATCATCATGTGGCGGGTGTTTGCAGTTATTCGCCCCACCCTCCACAACTTCACCAACACCCACCGCATTGCTGATGAGAGTATGTTCACTACAACTGATCAATTCCCCACTTACGCTGCCGCCGCCAACAACCGACGAACCTTTTCCACCGCCATCTTCAACATCATTCGTGCTCCTTTCTCTATTCTCTCTTGCTTCGCTCCACCCTCTGTTCACCGCTCCCCCGACGCCTTCTGGCTCTCTGGTGACCACTATTTTGCCTCCACTATTTCCGAGATCAACCACCTTATGGTAAGCGATGGCATGCGTTACGCCATATTGATGTAAAAGCTTTAAAACTAATCTTACCAAACACACAACCATATATATGTATTAGAATTAAGTACTTTAGCTTTTATTTCGGTTGTACCTGATAAATAATCACTTGGGTTTTGTTTTTGTTCTTTTTTTTTTTTTTTTTGGTTAAATTTGATTTAGTGTACTATGTTTCTAATATGTTACCAG

mRNA sequence

CCCATCCCATTCTCTCTCTTCCCTTCATTTCCTTCTTCAAAACCCCCCATTAGTTTATTCCCTCTTCCTCCCTTAGGATCTACAGCCCAAGAAAAAACTAATACACACATACACACACACCCATATATATACACACATCATCATCATGTGGCGGGTGTTTGCAGTTATTCGCCCCACCCTCCACAACTTCACCAACACCCACCGCATTGCTGATGAGAGTATGTTCACTACAACTGATCAATTCCCCACTTACGCTGCCGCCGCCAACAACCGACGAACCTTTTCCACCGCCATCTTCAACATCATTCGTGCTCCTTTCTCTATTCTCTCTTGCTTCGCTCCACCCTCTGTTCACCGCTCCCCCGACGCCTTCTGGCTCTCTGGTGACCACTATTTTGCCTCCACTATTTCCGAGATCAACCACCTTATGGTAAGCGATGGCATGCGTTACGCCATATTGATGTAAAAGCTTTAAAACTAATCTTACCAAACACACAACCATATATATGTATTAGAATTAAGTACTTTAGCTTTTATTTCGGTTGTACCTGATAAATAATCACTTGGGTTTTGTTTTTGTTCTTTTTTTTTTTTTTTTTGGTTAAATTTGATTTAGTGTACTATGTTTCTAATATGTTACCAG

Coding sequence (CDS)

ATGTGGCGGGTGTTTGCAGTTATTCGCCCCACCCTCCACAACTTCACCAACACCCACCGCATTGCTGATGAGAGTATGTTCACTACAACTGATCAATTCCCCACTTACGCTGCCGCCGCCAACAACCGACGAACCTTTTCCACCGCCATCTTCAACATCATTCGTGCTCCTTTCTCTATTCTCTCTTGCTTCGCTCCACCCTCTGTTCACCGCTCCCCCGACGCCTTCTGGCTCTCTGGTGACCACTATTTTGCCTCCACTATTTCCGAGATCAACCACCTTATGGTAAGCGATGGCATGCGTTACGCCATATTGATGTAA

Protein sequence

MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSILSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM

Homology

[Close]

BLAST of IVF0006580 vs. ExPASy TrEMBL
Match: A0A5D3CJA9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00520 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.1e-53
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI 60
           MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI
Sbjct: 1   MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI 60

Query: 61  LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 107
           LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM
Sbjct: 61  LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 106

[Close]

BLAST of IVF0006580 vs. ExPASy TrEMBL
Match: A0A1S3C290 (uncharacterized protein LOC103496030 OS=Cucumis melo OX=3656 GN=LOC103496030 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.1e-53
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI 60
           MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI
Sbjct: 1   MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI 60

Query: 61  LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 107
           LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM
Sbjct: 61  LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 106

[Close]

BLAST of IVF0006580 vs. ExPASy TrEMBL
Match: A0A5A7UIL8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001420 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.2e-53
Identity = 105/106 (99.06%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI 60
           MWRVFAVIRPTLHNFTN+HRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI
Sbjct: 1   MWRVFAVIRPTLHNFTNSHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI 60

Query: 61  LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 107
           LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM
Sbjct: 61  LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 106

[Close]

BLAST of IVF0006580 vs. ExPASy TrEMBL
Match: A0A0A0KFS1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G110050 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.1e-48
Identity = 97/106 (91.51%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 1   MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI 60
           MW+VFA+IRPTLHNFTN+HRIADESMFT+TDQFP Y AAANNRRTFS++IFNIIRAPFSI
Sbjct: 1   MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIY-AAANNRRTFSSSIFNIIRAPFSI 60

Query: 61  LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 107
           LSCFAPP+VHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM
Sbjct: 61  LSCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 105

[Close]

BLAST of IVF0006580 vs. ExPASy TrEMBL
Match: A0A6J1J5Y3 (uncharacterized protein LOC111483748 OS=Cucurbita maxima OX=3661 GN=LOC111483748 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.7e-36
Identity = 82/113 (72.57%), Postives = 92/113 (81.42%), Query Frame = 0


Query: 1   MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANN-------RRTFSTAIFNI 60
           MWR+ A +RPTLHNFTN+HR+ADESMFTTT +FP YA A ++        RTFS A+F+I
Sbjct: 1   MWRLIAALRPTLHNFTNSHRVADESMFTTT-EFPIYAVANHHHHRRPAAHRTFS-AVFSI 60

Query: 61  IRAPFSILSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 107
           IRAPFSILSCFAPP VH S D FWLS DHYFASTISE NHLMVSDGMRYA+LM
Sbjct: 61  IRAPFSILSCFAPPPVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM 111

[Close]

BLAST of IVF0006580 vs. NCBI nr
Match: XP_008455967.1 (PREDICTED: uncharacterized protein LOC103496030 [Cucumis melo] >TYK11891.1 uncharacterized protein E5676_scaffold177G00520 [Cucumis melo var. makuwa])

HSP 1 Score: 216 bits (550), Expect = 8.71e-71
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI 60
           MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI
Sbjct: 1   MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI 60

Query: 61  LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 106
           LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM
Sbjct: 61  LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 106

[Close]

BLAST of IVF0006580 vs. NCBI nr
Match: KAA0053319.1 (uncharacterized protein E6C27_scaffold102G001420 [Cucumis melo var. makuwa])

HSP 1 Score: 214 bits (546), Expect = 3.55e-70
Identity = 105/106 (99.06%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI 60
           MWRVFAVIRPTLHNFTN+HRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI
Sbjct: 1   MWRVFAVIRPTLHNFTNSHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI 60

Query: 61  LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 106
           LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM
Sbjct: 61  LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 106

[Close]

BLAST of IVF0006580 vs. NCBI nr
Match: XP_011656875.1 (uncharacterized protein LOC105435779 [Cucumis sativus] >KGN46586.1 hypothetical protein Csa_005504 [Cucumis sativus])

HSP 1 Score: 198 bits (503), Expect = 1.25e-63
Identity = 97/106 (91.51%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 1   MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI 60
           MW+VFA+IRPTLHNFTN+HRIADESMFT+TDQFP YAAA NNRRTFS++IFNIIRAPFSI
Sbjct: 1   MWQVFALIRPTLHNFTNSHRIADESMFTSTDQFPIYAAA-NNRRTFSSSIFNIIRAPFSI 60

Query: 61  LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 106
           LSCFAPP+VHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM
Sbjct: 61  LSCFAPPAVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 105

[Close]

BLAST of IVF0006580 vs. NCBI nr
Match: XP_022985817.1 (uncharacterized protein LOC111483748 [Cucurbita maxima])

HSP 1 Score: 158 bits (399), Expect = 1.09e-47
Identity = 82/113 (72.57%), Postives = 92/113 (81.42%), Query Frame = 0


Query: 1   MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANNR-------RTFSTAIFNI 60
           MWR+ A +RPTLHNFTN+HR+ADESMFTTT+ FP YA A ++        RTFS A+F+I
Sbjct: 1   MWRLIAALRPTLHNFTNSHRVADESMFTTTE-FPIYAVANHHHHRRPAAHRTFS-AVFSI 60

Query: 61  IRAPFSILSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 106
           IRAPFSILSCFAPP VH S D FWLS DHYFASTISE NHLMVSDGMRYA+LM
Sbjct: 61  IRAPFSILSCFAPPPVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM 111

[Close]

BLAST of IVF0006580 vs. NCBI nr
Match: XP_023513038.1 (uncharacterized protein LOC111777603 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 157 bits (398), Expect = 1.60e-47
Identity = 82/114 (71.93%), Postives = 92/114 (80.70%), Query Frame = 0


Query: 1   MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANNR--------RTFSTAIFN 60
           MWR+ A +RPTLHNFTN+HR+ADESMFTTT+ FP YA A ++         RTFS A+F+
Sbjct: 1   MWRLIAALRPTLHNFTNSHRVADESMFTTTE-FPIYAVANHHHHRRRPAAHRTFS-AVFS 60

Query: 61  IIRAPFSILSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 106
           IIRAPFSILSCFAPP VH S D FWLS DHYFASTISE NHLMVSDGMRYA+LM
Sbjct: 61  IIRAPFSILSCFAPPPVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM 112

[Close]

BLAST of IVF0006580 vs. TAIR 10
Match: AT5G35732.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04795.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 78.2 bits (191), Expect = 4.5e-15
Identity = 46/106 (43.40%), Postives = 64/106 (60.38%), Query Frame = 0


Query: 1   MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI 60
           M ++ +V+R  L N   + R+AD++   ++         AN RR    ++  I+R PFSI
Sbjct: 1   MTQMLSVLRRNLQNLRKSPRVADDTELPSSTSGAGPGVVANGRRDGFNSV--IMRFPFSI 60

Query: 61  LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 107
           +SCFA P V    D  W+SGD+    +ISE+NHLMVSD MRYAILM
Sbjct: 61  ISCFAVPRV-SGTDGLWVSGDY---GSISEVNHLMVSDSMRYAILM 100

[Close]

BLAST of IVF0006580 vs. TAIR 10
Match: AT2G04795.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35732.1); Has 18 Blast hits to 18 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 70.5 bits (171), Expect = 9.3e-13
Identity = 40/106 (37.74%), Postives = 60/106 (56.60%), Query Frame = 0


Query: 1   MWRVFAVIRPTLHNFTNTHRIADESMFTTTDQFPTYAAAANNRRTFSTAIFNIIRAPFSI 60
           M ++ +++R  L N   + R+ADES   +T     +     +          I++ P SI
Sbjct: 1   MLKMLSILRRNLQNLRKSPRVADESALPSTTVNGDHGGGNGSNG-------GIMKFPLSI 60

Query: 61  LSCFAPPSVHRSPDAFWLSGDHYFASTISEINHLMVSDGMRYAILM 107
           +SCF+ P V R+ D  W+SGD+     +SE+NHLMV DGMRYA+LM
Sbjct: 61  MSCFSVPRVSRA-DGVWVSGDY---GRVSEVNHLMVCDGMRYALLM 95

The following BLAST results are available for this feature:

BLAST of IVF0006580 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0006580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CJA9	1.1e-53	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C290	1.1e-53	100.00	uncharacterized protein LOC103496030 OS=Cucumis melo OX=3656 GN=LOC103496030 PE=...	[more]
A0A5A7UIL8	3.2e-53	99.06	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KFS1	3.1e-48	91.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G110050 PE=4 SV=1	[more]
A0A6J1J5Y3	4.7e-36	72.57	uncharacterized protein LOC111483748 OS=Cucurbita maxima OX=3661 GN=LOC111483748...	[more]

BLAST of IVF0006580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455967.1	8.71e-71	100.00	PREDICTED: uncharacterized protein LOC103496030 [Cucumis melo] >TYK11891.1 uncha...	[more]
KAA0053319.1	3.55e-70	99.06	uncharacterized protein E6C27_scaffold102G001420 [Cucumis melo var. makuwa]	[more]
XP_011656875.1	1.25e-63	91.51	uncharacterized protein LOC105435779 [Cucumis sativus] >KGN46586.1 hypothetical ...	[more]
XP_022985817.1	1.09e-47	72.57	uncharacterized protein LOC111483748 [Cucurbita maxima]	[more]
XP_023513038.1	1.60e-47	71.93	uncharacterized protein LOC111777603 [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0006580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35732.1	4.5e-15	43.40	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G04795.1	9.3e-13	37.74	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR48165	BNAC03G44900D PROTEIN	coord: 1..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0006580.1	IVF0006580.1	mRNA