IVF0006549 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGATGATGATCGAATTTGAAGATGGAGATATCACCAAGCTTGATTGGAGATGGAGAAGCGAGACTGCACCAACATATTGGTTGCAGCTCCTGGAAGAAGATGATCCTATCCACTTCAACTGTGTTAAAGATGAAGATGATGATCCCATCGGTTGCGATCGCTTTGAAGATGAAAATGATAATTGTCTCGGTTGTGCCACCTTGAAGATAAAGATGATGATTGTCTCAACTGTGTCACCTTGAAGATAGAGATAATGATTGTCTCGACTACGTCGCATTCAAGATGGAGATGATGATCGTCTCAGTTGCATCGCATTGAAGATAAAGATGGTGATCGTCTCGGTTGCATCGCATTGAAGATGAAGATGATGATCATCTCCGTTGCATCGTATTGAAGATGAAGATGATGATCGTCTCGGTTGCGTCACATTGAAGATAGAGATAATGATTATCTCAGCTGCGTTGTATTGAAGATGAAGATGAAGATGATCTTATCGACAGCGGCAACATTGAAGACGAAGATGAAGATCCTCCCGACTGCAAGCGCATTAAAGAAGATGAAGATGATGATCCTCTCAGTTGCGGACACATTGAAGAAGATGGAGATGATAATCCTCTTGACTACAACACGTGTGAGAAGATGAAGATGACGATCCTCTCGGCTCTAACACATGTGAGAAGATGA ATGAAGATGATGATCGAATTTGAAGATGGAGATATCACCAAGCTTGATTGGAGATGGAGAAGCGAGACTGCACCAACATATTGGTTGCAGCTCCTGGAAGAAGATGATCCTATCCACTTCAACTGTGTTAAAGATGAAGATGATGATCCCATCGGTTGCGATCGCTTTGAAGATGAAAATGATAATTGTCTCGATGAAGATGAAGATGATCTTATCGACAGCGGCAACATTGAAGACGAAGATGAAGATCCTCCCGACTGCAAGCGCATTAAAGAAGATGAAGATGATGATCCTCTCAGTTGCGGACACATTGAAGAAGATGGAGATGATAATCCTCTTGACTACAACACGTGTGAGAAGATGAAGATGACGATCCTCTCGGCTCTAACACATGTGAGAAGATGA ATGAAGATGATGATCGAATTTGAAGATGGAGATATCACCAAGCTTGATTGGAGATGGAGAAGCGAGACTGCACCAACATATTGGTTGCAGCTCCTGGAAGAAGATGATCCTATCCACTTCAACTGTGTTAAAGATGAAGATGATGATCCCATCGGTTGCGATCGCTTTGAAGATGAAAATGATAATTGTCTCGATGAAGATGAAGATGATCTTATCGACAGCGGCAACATTGAAGACGAAGATGAAGATCCTCCCGACTGCAAGCGCATTAAAGAAGATGAAGATGATGATCCTCTCAGTTGCGGACACATTGAAGAAGATGGAGATGATAATCCTCTTGACTACAACACGTGTGAGAAGATGAAGATGACGATCCTCTCGGCTCTAACACATGTGAGAAGATGA MKMMIEFEDGDITKLDWRWRSETAPTYWLQLLEEDDPIHFNCVKDEDDDPIGCDRFEDENDNCLDEDEDDLIDSGNIEDEDEDPPDCKRIKEDEDDDPLSCGHIEEDGDDNPLDYNTCEKMKMTILSALTHVRR Homology
BLAST of IVF0006549 vs. ExPASy TrEMBL
Match: A0A5A7T1P1 (Phosphopantothenoylcysteine decarboxylase subunit VHS3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00660 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 6.6e-11 Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0
BLAST of IVF0006549 vs. ExPASy TrEMBL
Match: A0A5D3D493 (Phosphopantothenoylcysteine decarboxylase subunit VHS3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00860 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 6.6e-11 Identity = 59/147 (40.14%), Postives = 77/147 (52.38%), Query Frame = 0
BLAST of IVF0006549 vs. ExPASy TrEMBL
Match: A0A5A7TVT5 (Phosphopantothenoylcysteine decarboxylase subunit VHS3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2754G00160 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.1e-10 Identity = 43/59 (72.88%), Postives = 47/59 (79.66%), Query Frame = 0
BLAST of IVF0006549 vs. ExPASy TrEMBL
Match: A0A1S3CK92 (prostatic spermine-binding protein-like OS=Cucumis melo OX=3656 GN=LOC103501754 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.5e-10 Identity = 60/168 (35.71%), Postives = 80/168 (47.62%), Query Frame = 0
BLAST of IVF0006549 vs. ExPASy TrEMBL
Match: A0A5D3DSX1 (Prostatic spermine-binding protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G00120 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 8.0e-09 Identity = 47/105 (44.76%), Postives = 62/105 (59.05%), Query Frame = 0
BLAST of IVF0006549 vs. NCBI nr
Match: KAA0047572.1 (phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa] >TYK14966.1 phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa]) HSP 1 Score: 76.6 bits (187), Expect = 1.27e-15 Identity = 43/59 (72.88%), Postives = 47/59 (79.66%), Query Frame = 0
BLAST of IVF0006549 vs. NCBI nr
Match: TYK18365.1 (phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa]) HSP 1 Score: 77.8 bits (190), Expect = 6.43e-15 Identity = 62/155 (40.00%), Postives = 75/155 (48.39%), Query Frame = 0
BLAST of IVF0006549 vs. NCBI nr
Match: KAA0037362.1 (phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa] >TYJ97544.1 phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa]) HSP 1 Score: 77.0 bits (188), Expect = 6.52e-15 Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0
BLAST of IVF0006549 vs. NCBI nr
Match: XP_008463661.1 (PREDICTED: prostatic spermine-binding protein-like [Cucumis melo]) HSP 1 Score: 76.3 bits (186), Expect = 5.83e-14 Identity = 60/168 (35.71%), Postives = 80/168 (47.62%), Query Frame = 0
BLAST of IVF0006549 vs. NCBI nr
Match: KAA0039603.1 (phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa] >TYK01703.1 phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa]) HSP 1 Score: 70.9 bits (172), Expect = 6.66e-13 Identity = 50/98 (51.02%), Postives = 59/98 (60.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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