IVF0006488 (gene) Melon (IVF77) v1

Overview


Name	IVF0006488
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Lipase maturation factor 2
Location	chr10: 4065531 .. 4066508 (-)
RNA-Seq Expression	IVF0006488
Synteny	IVF0006488

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCCACAGCTACATTGCCTTATCCACAACCAACCAATAGATTTCAATAACCATTCTCTAGAGAACCCCCATGCGATATCCTCTTTGATAGTCTGTTGTTTACACGTAAGAAATGTATTGCACAAAAGAAGAGAAGAAAAATAGTCTCTTCTATTCTAATATCGTAAACTCCCACATGGTAATGTGAGATTGAGAAACAATGGCACATTCACTATCTTCTATATCGGCCACAGCCAATGTCACAGCCACCATTTCACGCTCTATCCGTTTCAGCAACACACAATGTTCCTATCATAGGCTTCCAAATCCACAAGCTCGCAGCAACGCTCGCAATCAATCCGAACCTAGCAATCTCATCTCACGCAGGTACAAGTCCAATACGAGGGAATATCTACAACATTATATCACCAGTACTAATTTATCAACGATAGGTTCTGAGTTGGTTCTAGATTTTGTTATTATATGCAATTGACCATACTAATATGTTACGTGTATTATAAATTTTGTGTTCAAATTTCTCTAAGATCATTAGCCATATCCCAATGTGGTGTGGCTCAAAATTGCAGAAACACTGCCTTGATCTTGACAGGGGTAATGCTGGGAGTGAATGTGGTTGACCGGAGTGCGGAGGCAGCGGCAAGAAGGCCGCCGCCACCTCCACCGAAAGAGAAGAAGGACCCCAATCTGAGTGGGGTTCAGGCAAAAGTGCTAGCTAGTAAAAAGAGAAAGGAAGCCCTTAAAGAAGCTACAGCTAAGCTAAGAGCGAAAGGGAAACCTGTTGACCAGCCACCACCTGAATAATTTATGTGAATCCCAAACTTTTTGATGTTTTCGCATTTCTCCCGTCGGATATATGTTAATCCACCTGAATAAAGAGTGCATATTTATATTAACAACTCTAATCTTCGTTTGTGAAGTAAGATATGATTAAGGCCATGTGGCCATTCTATTGATTGTACTCTATTCTACGAGTTCCAAG

mRNA sequence

GTCCACAGCTACATTGCCTTATCCACAACCAACCAATAGATTTCAATAACCATTCTCTAGAGAACCCCCATGCGATATCCTCTTTGATAGTCTGTTGTTTACACGTAAGAAATGTATTGCACAAAAGAAGAGAAGAAAAATAGTCTCTTCTATTCTAATATCGTAAACTCCCACATGGTAATGTGAGATTGAGAAACAATGGCACATTCACTATCTTCTATATCGGCCACAGCCAATGTCACAGCCACCATTTCACGCTCTATCCGTTTCAGCAACACACAATGTTCCTATCATAGGCTTCCAAATCCACAAGCTCGCAGCAACGCTCGCAATCAATCCGAACCTAGCAATCTCATCTCACGCAGAAACACTGCCTTGATCTTGACAGGGGTAATGCTGGGAGTGAATGTGGTTGACCGGAGTGCGGAGGCAGCGGCAAGAAGGCCGCCGCCACCTCCACCGAAAGAGAAGAAGGACCCCAATCTGAGTGGGGTTCAGGCAAAAGTGCTAGCTAGTAAAAAGAGAAAGGAAGCCCTTAAAGAAGCTACAGCTAAGCTAAGAGCGAAAGGGAAACCTGTTGACCAGCCACCACCTGAATAATTTATGTGAATCCCAAACTTTTTGATGTTTTCGCATTTCTCCCGTCGGATATATGTTAATCCACCTGAATAAAGAGTGCATATTTATATTAACAACTCTAATCTTCGTTTGTGAAGTAAGATATGATTAAGGCCATGTGGCCATTCTATTGATTGTACTCTATTCTACGAGTTCCAAG

Coding sequence (CDS)

ATGGCACATTCACTATCTTCTATATCGGCCACAGCCAATGTCACAGCCACCATTTCACGCTCTATCCGTTTCAGCAACACACAATGTTCCTATCATAGGCTTCCAAATCCACAAGCTCGCAGCAACGCTCGCAATCAATCCGAACCTAGCAATCTCATCTCACGCAGAAACACTGCCTTGATCTTGACAGGGGTAATGCTGGGAGTGAATGTGGTTGACCGGAGTGCGGAGGCAGCGGCAAGAAGGCCGCCGCCACCTCCACCGAAAGAGAAGAAGGACCCCAATCTGAGTGGGGTTCAGGCAAAAGTGCTAGCTAGTAAAAAGAGAAAGGAAGCCCTTAAAGAAGCTACAGCTAAGCTAAGAGCGAAAGGGAAACCTGTTGACCAGCCACCACCTGAATAA

Protein sequence

MAHSLSSISATANVTATISRSIRFSNTQCSYHRLPNPQARSNARNQSEPSNLISRRNTALILTGVMLGVNVVDRSAEAAARRPPPPPPKEKKDPNLSGVQAKVLASKKRKEALKEATAKLRAKGKPVDQPPPE

Homology

[Close]

BLAST of IVF0006488 vs. ExPASy TrEMBL
Match: A0A5A7SY24 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G001700 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.1e-61
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAHSLSSISATANVTATISRSIRFSNTQCSYHRLPNPQARSNARNQSEPSNLISRRNTAL 60
           MAHSLSSISATANVTATISRSIRFSNTQCSYHRLPNPQARSNARNQSEPSNLISRRNTAL
Sbjct: 1   MAHSLSSISATANVTATISRSIRFSNTQCSYHRLPNPQARSNARNQSEPSNLISRRNTAL 60

Query: 61  ILTGVMLGVNVVDRSAEAAARRPPPPPPKEKKDPNLSGVQAKVLASKKRKEALKEATAKL 120
           ILTGVMLGVNVVDRSAEAAARRPPPPPPKEKKDPNLSGVQAKVLASKKRKEALKEATAKL
Sbjct: 61  ILTGVMLGVNVVDRSAEAAARRPPPPPPKEKKDPNLSGVQAKVLASKKRKEALKEATAKL 120

Query: 121 RAKGKPVDQPPPE 134
           RAKGKPVDQPPPE
Sbjct: 121 RAKGKPVDQPPPE 133

[Close]

BLAST of IVF0006488 vs. ExPASy TrEMBL
Match: A0A1S3BE14 (uncharacterized protein LOC103488868 OS=Cucumis melo OX=3656 GN=LOC103488868 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.1e-61
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAHSLSSISATANVTATISRSIRFSNTQCSYHRLPNPQARSNARNQSEPSNLISRRNTAL 60
           MAHSLSSISATANVTATISRSIRFSNTQCSYHRLPNPQARSNARNQSEPSNLISRRNTAL
Sbjct: 1   MAHSLSSISATANVTATISRSIRFSNTQCSYHRLPNPQARSNARNQSEPSNLISRRNTAL 60

Query: 61  ILTGVMLGVNVVDRSAEAAARRPPPPPPKEKKDPNLSGVQAKVLASKKRKEALKEATAKL 120
           ILTGVMLGVNVVDRSAEAAARRPPPPPPKEKKDPNLSGVQAKVLASKKRKEALKEATAKL
Sbjct: 61  ILTGVMLGVNVVDRSAEAAARRPPPPPPKEKKDPNLSGVQAKVLASKKRKEALKEATAKL 120

Query: 121 RAKGKPVDQPPPE 134
           RAKGKPVDQPPPE
Sbjct: 121 RAKGKPVDQPPPE 133

[Close]

BLAST of IVF0006488 vs. ExPASy TrEMBL
Match: A0A0A0KPU5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G588750 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 9.6e-55
Identity = 122/133 (91.73%), Postives = 128/133 (96.24%), Query Frame = 0


Query: 1   MAHSLSSISATANVTATISRSIRFSNTQCSYHRLPNPQARSNARNQSEPSNLISRRNTAL 60
           MAHSLSSISATANVTAT+SRSIRFSNTQCSY RLPNPQA SNA N+++ +NLISRRNTAL
Sbjct: 1   MAHSLSSISATANVTATLSRSIRFSNTQCSYQRLPNPQACSNACNETQHTNLISRRNTAL 60

Query: 61  ILTGVMLGVNVVDRSAEAAARRPPPPPPKEKKDPNLSGVQAKVLASKKRKEALKEATAKL 120
           ILTGVMLGVNVVDR AEAAARRPPPPPP+EKKDPNLSGVQAKVLASKKRKEALKEATAKL
Sbjct: 61  ILTGVMLGVNVVDRRAEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKEATAKL 120

Query: 121 RAKGKPVDQPPPE 134
           RAKGKPVDQPPPE
Sbjct: 121 RAKGKPVDQPPPE 133

[Close]

BLAST of IVF0006488 vs. ExPASy TrEMBL
Match: A0A6J1K8T5 (uncharacterized protein LOC111493312 OS=Cucurbita maxima OX=3661 GN=LOC111493312 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.4e-37
Identity = 102/135 (75.56%), Postives = 113/135 (83.70%), Query Frame = 0


Query: 1   MAHSLSSISATANVTATISRSIRFSNTQCS-YHRLPNPQARSNARNQSEPSNLISRRNTA 60
           MAHSLSSISATAN TA      RFSN +CS   RLPN QARS+A NQ+  ++LISRRN A
Sbjct: 1   MAHSLSSISATANATAA-----RFSNPRCSTCLRLPNLQARSHACNQTARTHLISRRNAA 60

Query: 61  LILTGVMLGV-NVVDRSAEAAARRPPPPPPKEKKDPNLSGVQAKVLASKKRKEALKEATA 120
           LILTG MLG+ NVV +SAEAAARRPPPPPP+EKKDPNLSGVQAKVLAS+KRKEA+KEA A
Sbjct: 61  LILTGAMLGLNNVVVQSAEAAARRPPPPPPQEKKDPNLSGVQAKVLASRKRKEAMKEAMA 120

Query: 121 KLRAKGKPVDQPPPE 134
           KLR +GK VDQPPPE
Sbjct: 121 KLRERGKAVDQPPPE 130

[Close]

BLAST of IVF0006488 vs. ExPASy TrEMBL
Match: A0A6J1GYZ4 (uncharacterized protein LOC111458160 OS=Cucurbita moschata OX=3662 GN=LOC111458160 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 2.4e-37
Identity = 102/135 (75.56%), Postives = 112/135 (82.96%), Query Frame = 0


Query: 1   MAHSLSSISATANVTATISRSIRFSNTQC-SYHRLPNPQARSNARNQSEPSNLISRRNTA 60
           MAHSLSSISATAN TA      RFSN +C S  RLPN QARS A NQ+  S+LISRRN A
Sbjct: 1   MAHSLSSISATANATAA-----RFSNPRCSSCLRLPNLQARSQACNQTARSHLISRRNAA 60

Query: 61  LILTGVMLGV-NVVDRSAEAAARRPPPPPPKEKKDPNLSGVQAKVLASKKRKEALKEATA 120
           LILTG +LG+ NVV +SAEAAARRPPPPPP+EKKDPNLSGVQAKVLAS+KRKEA+KEA A
Sbjct: 61  LILTGAILGLNNVVVQSAEAAARRPPPPPPQEKKDPNLSGVQAKVLASRKRKEAMKEAMA 120

Query: 121 KLRAKGKPVDQPPPE 134
           KLR +GK VDQPPPE
Sbjct: 121 KLRERGKAVDQPPPE 130

[Close]

BLAST of IVF0006488 vs. NCBI nr
Match: XP_008446014.1 (PREDICTED: uncharacterized protein LOC103488868 [Cucumis melo] >KAA0034177.1 uncharacterized protein E6C27_scaffold65G001700 [Cucumis melo var. makuwa])

HSP 1 Score: 245 bits (626), Expect = 1.64e-81
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAHSLSSISATANVTATISRSIRFSNTQCSYHRLPNPQARSNARNQSEPSNLISRRNTAL 60
           MAHSLSSISATANVTATISRSIRFSNTQCSYHRLPNPQARSNARNQSEPSNLISRRNTAL
Sbjct: 1   MAHSLSSISATANVTATISRSIRFSNTQCSYHRLPNPQARSNARNQSEPSNLISRRNTAL 60

Query: 61  ILTGVMLGVNVVDRSAEAAARRPPPPPPKEKKDPNLSGVQAKVLASKKRKEALKEATAKL 120
           ILTGVMLGVNVVDRSAEAAARRPPPPPPKEKKDPNLSGVQAKVLASKKRKEALKEATAKL
Sbjct: 61  ILTGVMLGVNVVDRSAEAAARRPPPPPPKEKKDPNLSGVQAKVLASKKRKEALKEATAKL 120

Query: 121 RAKGKPVDQPPPE 133
           RAKGKPVDQPPPE
Sbjct: 121 RAKGKPVDQPPPE 133

[Close]

BLAST of IVF0006488 vs. NCBI nr
Match: XP_004135338.1 (uncharacterized protein LOC101217329 [Cucumis sativus] >KGN51655.1 hypothetical protein Csa_009138 [Cucumis sativus])

HSP 1 Score: 224 bits (570), Expect = 5.67e-73
Identity = 122/133 (91.73%), Postives = 128/133 (96.24%), Query Frame = 0


Query: 1   MAHSLSSISATANVTATISRSIRFSNTQCSYHRLPNPQARSNARNQSEPSNLISRRNTAL 60
           MAHSLSSISATANVTAT+SRSIRFSNTQCSY RLPNPQA SNA N+++ +NLISRRNTAL
Sbjct: 1   MAHSLSSISATANVTATLSRSIRFSNTQCSYQRLPNPQACSNACNETQHTNLISRRNTAL 60

Query: 61  ILTGVMLGVNVVDRSAEAAARRPPPPPPKEKKDPNLSGVQAKVLASKKRKEALKEATAKL 120
           ILTGVMLGVNVVDR AEAAARRPPPPPP+EKKDPNLSGVQAKVLASKKRKEALKEATAKL
Sbjct: 61  ILTGVMLGVNVVDRRAEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKEATAKL 120

Query: 121 RAKGKPVDQPPPE 133
           RAKGKPVDQPPPE
Sbjct: 121 RAKGKPVDQPPPE 133

[Close]

BLAST of IVF0006488 vs. NCBI nr
Match: XP_038877882.1 (uncharacterized protein LOC120070100 [Benincasa hispida])

HSP 1 Score: 198 bits (503), Expect = 9.24e-63
Identity = 111/133 (83.46%), Postives = 118/133 (88.72%), Query Frame = 0


Query: 1   MAHSLSSISATANVTATISRSIRFSNTQCSYHRLPNPQARSNARNQSEPSNLISRRNTAL 60
           MAHSLSSISATANVTA +SRS R S  QCS  RLPN Q RSNA N++  S+LISRRN  L
Sbjct: 1   MAHSLSSISATANVTAALSRSTRISGMQCSNQRLPNLQTRSNACNRTPCSHLISRRNAFL 60

Query: 61  ILTGVMLGVNVVDRSAEAAARRPPPPPPKEKKDPNLSGVQAKVLASKKRKEALKEATAKL 120
           ILTG +LG+NVVDRSAEAAARRPPPPPP+EKKDPNLSGVQAKVLASKKRKEALKEATAKL
Sbjct: 61  ILTGAILGLNVVDRSAEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEALKEATAKL 120

Query: 121 RAKGKPVDQPPPE 133
           RAKGKPVDQPPPE
Sbjct: 121 RAKGKPVDQPPPE 133

[Close]

BLAST of IVF0006488 vs. NCBI nr
Match: XP_022998742.1 (uncharacterized protein LOC111493312 [Cucurbita maxima])

HSP 1 Score: 167 bits (423), Expect = 1.28e-50
Identity = 102/135 (75.56%), Postives = 113/135 (83.70%), Query Frame = 0


Query: 1   MAHSLSSISATANVTATISRSIRFSNTQCSYH-RLPNPQARSNARNQSEPSNLISRRNTA 60
           MAHSLSSISATAN TA      RFSN +CS   RLPN QARS+A NQ+  ++LISRRN A
Sbjct: 1   MAHSLSSISATANATAA-----RFSNPRCSTCLRLPNLQARSHACNQTARTHLISRRNAA 60

Query: 61  LILTGVMLGVN-VVDRSAEAAARRPPPPPPKEKKDPNLSGVQAKVLASKKRKEALKEATA 120
           LILTG MLG+N VV +SAEAAARRPPPPPP+EKKDPNLSGVQAKVLAS+KRKEA+KEA A
Sbjct: 61  LILTGAMLGLNNVVVQSAEAAARRPPPPPPQEKKDPNLSGVQAKVLASRKRKEAMKEAMA 120

Query: 121 KLRAKGKPVDQPPPE 133
           KLR +GK VDQPPPE
Sbjct: 121 KLRERGKAVDQPPPE 130

[Close]

BLAST of IVF0006488 vs. NCBI nr
Match: XP_022956419.1 (uncharacterized protein LOC111458160 [Cucurbita moschata] >KAG6601612.1 hypothetical protein SDJN03_06845, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 166 bits (421), Expect = 2.58e-50
Identity = 102/135 (75.56%), Postives = 112/135 (82.96%), Query Frame = 0


Query: 1   MAHSLSSISATANVTATISRSIRFSNTQCSYH-RLPNPQARSNARNQSEPSNLISRRNTA 60
           MAHSLSSISATAN TA      RFSN +CS   RLPN QARS A NQ+  S+LISRRN A
Sbjct: 1   MAHSLSSISATANATAA-----RFSNPRCSSCLRLPNLQARSQACNQTARSHLISRRNAA 60

Query: 61  LILTGVMLGVN-VVDRSAEAAARRPPPPPPKEKKDPNLSGVQAKVLASKKRKEALKEATA 120
           LILTG +LG+N VV +SAEAAARRPPPPPP+EKKDPNLSGVQAKVLAS+KRKEA+KEA A
Sbjct: 61  LILTGAILGLNNVVVQSAEAAARRPPPPPPQEKKDPNLSGVQAKVLASRKRKEAMKEAMA 120

Query: 121 KLRAKGKPVDQPPPE 133
           KLR +GK VDQPPPE
Sbjct: 121 KLRERGKAVDQPPPE 130

[Close]

BLAST of IVF0006488 vs. TAIR 10
Match: AT1G21500.1 (unknown protein; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 80.9 bits (198), Expect = 8.7e-16
Identity = 57/106 (53.77%), Postives = 68/106 (64.15%), Query Frame = 0


Query: 33  RLPNPQARSNARNQSEPSNL----ISRRNTALILTGVMLGVNVV--DRSAEAAARRPPPP 92
           RL +P  RS    Q+ P  L    I+RR   + L G +   N +     A AAARRPPPP
Sbjct: 17  RLSSPSPRS--LPQAPPVVLAVPPINRRTILVGLGGALWSWNALAAKEEAMAAARRPPPP 76

Query: 93  PPKEKKDPNLSGVQAKVLASKKRKEALKEATAKLRAKGKPVDQPPP 133
           PPKEKKDP ++GVQAKVLASKKRKE +K + AKLR KGKPV +  P
Sbjct: 77  PPKEKKDPTVTGVQAKVLASKKRKEEMKASIAKLREKGKPVVEAKP 120

The following BLAST results are available for this feature:

BLAST of IVF0006488 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0006488 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SY24	3.1e-61	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BE14	3.1e-61	100.00	uncharacterized protein LOC103488868 OS=Cucumis melo OX=3656 GN=LOC103488868 PE=...	[more]
A0A0A0KPU5	9.6e-55	91.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G588750 PE=4 SV=1	[more]
A0A6J1K8T5	1.4e-37	75.56	uncharacterized protein LOC111493312 OS=Cucurbita maxima OX=3661 GN=LOC111493312...	[more]
A0A6J1GYZ4	2.4e-37	75.56	uncharacterized protein LOC111458160 OS=Cucurbita moschata OX=3662 GN=LOC1114581...	[more]

BLAST of IVF0006488 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446014.1	1.64e-81	100.00	PREDICTED: uncharacterized protein LOC103488868 [Cucumis melo] >KAA0034177.1 unc...	[more]
XP_004135338.1	5.67e-73	91.73	uncharacterized protein LOC101217329 [Cucumis sativus] >KGN51655.1 hypothetical ...	[more]
XP_038877882.1	9.24e-63	83.46	uncharacterized protein LOC120070100 [Benincasa hispida]	[more]
XP_022998742.1	1.28e-50	75.56	uncharacterized protein LOC111493312 [Cucurbita maxima]	[more]
XP_022956419.1	2.58e-50	75.56	uncharacterized protein LOC111458160 [Cucurbita moschata] >KAG6601612.1 hypothet...	[more]

BLAST of IVF0006488 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21500.1	8.7e-16	53.77	unknown protein; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..122
None	No IPR available	PANTHER	PTHR37182	F24J8.11 PROTEIN	coord: 1..132
None	No IPR available	PANTHER	PTHR37182:SF2	F24J8.11 PROTEIN	coord: 1..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0006488.1	IVF0006488.1	mRNA