IVF0006480 (gene) Melon (IVF77) v1

Overview
NameIVF0006480
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr04: 15720122 .. 15720301 (-)
RNA-Seq ExpressionIVF0006480
SyntenyIVF0006480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGCAAGAAGGAAATCAGGGGTGATAGTCGTGGACTCATTCGACAACCTTTTTAGCGAGCACCTGCGTCTGGCGTCTTGCGAGAAGAAAAAGGAAAATCAGGGAAGGGAAGGGTTTGCGGAAAAGAAAGTCAGCAGGGGGTGGCTGTGGCAGCGGTTGTTGAAAAGAAATTCGTAG

mRNA sequence

ATGACTGCAAGAAGGAAATCAGGGGTGATAGTCGTGGACTCATTCGACAACCTTTTTAGCGAGCACCTGCGTCTGGCGTCTTGCGAGAAGAAAAAGGAAAATCAGGGAAGGGAAGGGTTTGCGGAAAAGAAAGTCAGCAGGGGGTGGCTGTGGCAGCGGTTGTTGAAAAGAAATTCGTAG

Coding sequence (CDS)

ATGACTGCAAGAAGGAAATCAGGGGTGATAGTCGTGGACTCATTCGACAACCTTTTTAGCGAGCACCTGCGTCTGGCGTCTTGCGAGAAGAAAAAGGAAAATCAGGGAAGGGAAGGGTTTGCGGAAAAGAAAGTCAGCAGGGGGTGGCTGTGGCAGCGGTTGTTGAAAAGAAATTCGTAG

Protein sequence

MTARRKSGVIVVDSFDNLFSEHLRLASCEKKKENQGREGFAEKKVSRGWLWQRLLKRNS
Homology
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BLAST of IVF0006480 vs. ExPASy TrEMBL
Match: A0A0A0LSH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132750 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.7e-06
Identity = 34/54 (62.96%), Postives = 38/54 (70.37%), Query Frame = 0 

Query: 1  MTARRKSGVIVVDSFDNLFSEHLRLASCEKKKENQ-GREGFAEKKVSR----GW 50
          MTARRK GV++VD F NLFSEH R  S EKK +NQ G EGFA+KKV      GW
Sbjct: 1  MTARRKLGVMIVDLFSNLFSEHQRPTSYEKKTKNQAGGEGFAKKKVGTKYKIGW 54

The following BLAST results are available for this feature:
BLAST of IVF0006480 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0006480 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSH43.7e-0662.96Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132750 PE=4 SV=1[more]
BLAST of IVF0006480 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of IVF0006480 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0006480.1IVF0006480.1mRNA