IVF0006401 (gene) Melon (IVF77) v1

Overview
NameIVF0006401
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDrebrin-like
Locationchr12: 9137520 .. 9137834 (+)
RNA-Seq ExpressionIVF0006401
SyntenyIVF0006401
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGCGTTTAAAGAGTAAGAAGACAGGGCAGGAAGCCAAGTTCTTTCCTAAAAAAGAAAAGAAGTCCAGGAGGAGGTTATTGATCACCTCACTCCAAAGGGAAAAAGAAATACTCTCTAAGGTAGTTGTCGAGAAAAGCCTCCCTTCACCATCGAAATTAACTCCAAACGCCTCAACACAAAAAGATCAGTTGAAGAAGGCAGTGAGAGAAAAAGAACGAGAAGAATTTGATGAGGACTATATCTTCGAGTTCATGGATCACTACATTCGTAAACCAATGGAGAAAGGAATTGATGATATAATCCAGTGCTAG

mRNA sequence

ATGACGCGTTTAAAGAGTAAGAAGACAGGGCAGGAAGCCAAGTTCTTTCCTAAAAAAGAAAAGAAGTCCAGGAGGAGGTTATTGATCACCTCACTCCAAAGGGAAAAAGAAATACTCTCTAAGGTAGTTGTCGAGAAAAGCCTCCCTTCACCATCGAAATTAACTCCAAACGCCTCAACACAAAAAGATCAGTTGAAGAAGGCAGTGAGAGAAAAAGAACGAGAAGAATTTGATGAGGACTATATCTTCGAGTTCATGGATCACTACATTCGTAAACCAATGGAGAAAGGAATTGATGATATAATCCAGTGCTAG

Coding sequence (CDS)

ATGACGCGTTTAAAGAGTAAGAAGACAGGGCAGGAAGCCAAGTTCTTTCCTAAAAAAGAAAAGAAGTCCAGGAGGAGGTTATTGATCACCTCACTCCAAAGGGAAAAAGAAATACTCTCTAAGGTAGTTGTCGAGAAAAGCCTCCCTTCACCATCGAAATTAACTCCAAACGCCTCAACACAAAAAGATCAGTTGAAGAAGGCAGTGAGAGAAAAAGAACGAGAAGAATTTGATGAGGACTATATCTTCGAGTTCATGGATCACTACATTCGTAAACCAATGGAGAAAGGAATTGATGATATAATCCAGTGCTAG

Protein sequence

MTRLKSKKTGQEAKFFPKKEKKSRRRLLITSLQREKEILSKVVVEKSLPSPSKLTPNASTQKDQLKKAVREKEREEFDEDYIFEFMDHYIRKPMEKGIDDIIQC
Homology
BLAST of IVF0006401 vs. ExPASy TrEMBL
Match: A0A5A7UCY8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1371G00370 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 9.8e-47
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0

Query: 1   MTRLKSKKTGQEAKFFPKKEKKSRRRLLITSLQREKEILSKVVVEKSLPSPSKLTPNAST 60
           MTRLKSKKTGQEAKFFPKKEKKSRRRLLITSLQREKEILSKVVVEKSLPSPSKLTPNAST
Sbjct: 1   MTRLKSKKTGQEAKFFPKKEKKSRRRLLITSLQREKEILSKVVVEKSLPSPSKLTPNAST 60

Query: 61  QKDQLKKAVREKEREEFDEDYIFEFMDHYIRKPMEKGIDDIIQC 105
           QKDQLKKAVREKEREEFDEDYIFEFMDHYIRKPMEKGIDDIIQC
Sbjct: 61  QKDQLKKAVREKEREEFDEDYIFEFMDHYIRKPMEKGIDDIIQC 104

BLAST of IVF0006401 vs. ExPASy TrEMBL
Match: A0A5D3DJV1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00410 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.2e-14
Identity = 49/84 (58.33%), Postives = 63/84 (75.00%), Query Frame = 0

Query: 19  KEKKSRRRLLITSLQREKEILSKVVVEKSLPSPSKLTPNASTQKDQLKKAVREKEREEFD 78
           K K+  + ++   L  EKEIL   V +KSLPSPSK T  AST+KD+LKK+VR+KE EE D
Sbjct: 22  KRKEILKEVIHDPLYGEKEILLNKVGKKSLPSPSKSTLKASTRKDKLKKSVRKKEEEEVD 81

Query: 79  EDYIFEFMDHYIRKPMEKGIDDII 103
            DYIF+FM+HYI KPM+KG +D+I
Sbjct: 82  GDYIFKFMNHYIYKPMDKGFEDVI 105

BLAST of IVF0006401 vs. ExPASy TrEMBL
Match: A0A5D3BAP9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2612G00500 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.0e-11
Identity = 44/87 (50.57%), Postives = 58/87 (66.67%), Query Frame = 0

Query: 18  KKEKKSRRRLLITSLQREKEILSKVVVEKSLPSPSKLTPNASTQKDQLKKAVREKEREEF 77
           +KEK+  +  +   LQ E E+  K   E+SLPSP K  P AST+ D+LKK VRE   EE 
Sbjct: 183 EKEKEVLKETIDNPLQGETEVFPKDADERSLPSPPKSIPKASTRLDKLKKVVRE---EEV 242

Query: 78  DEDYIFEFMDHYIRKPMEKGIDDIIQC 105
           D +Y F+FMD YI KP+E+G +DI+QC
Sbjct: 243 DANYFFKFMDDYICKPLERGFEDIVQC 266

BLAST of IVF0006401 vs. ExPASy TrEMBL
Match: A0A5A7T5Y0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1170G00580 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 6.6e-11
Identity = 44/87 (50.57%), Postives = 57/87 (65.52%), Query Frame = 0

Query: 18  KKEKKSRRRLLITSLQREKEILSKVVVEKSLPSPSKLTPNASTQKDQLKKAVREKEREEF 77
           +KEK+  +      LQ E E+  K   E+SLPSP K  P AST+ D+LKK VRE   EE 
Sbjct: 200 EKEKEVLKETTDNPLQGETEVFPKDADERSLPSPPKSIPKASTRLDKLKKVVRE---EEV 259

Query: 78  DEDYIFEFMDHYIRKPMEKGIDDIIQC 105
           D +Y F+FMD YI KP+E+G +DI+QC
Sbjct: 260 DANYFFKFMDDYICKPLERGFEDIVQC 283

BLAST of IVF0006401 vs. ExPASy TrEMBL
Match: A0A5D3CJ32 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G001300 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.1e-10
Identity = 43/73 (58.90%), Postives = 52/73 (71.23%), Query Frame = 0

Query: 32  LQREKEILSKVVVEKSLPSPSKLTPNASTQKDQLKKAVREKEREEFDEDYIFEFMDHYIR 91
           LQREKE + + V EKSLPS  K  P ASTQ D+LK+AVRE+  EE   DY+F F+D YI 
Sbjct: 9   LQREKEEVPEDVGEKSLPSSGKSIPEASTQLDKLKEAVREE--EEVSADYVFMFIDEYIC 68

Query: 92  KPMEKGIDDIIQC 105
           KP+E+G  DI QC
Sbjct: 69  KPLERGFKDIFQC 79

BLAST of IVF0006401 vs. NCBI nr
Match: KAA0052076.1 (hypothetical protein E6C27_scaffold578G00490 [Cucumis melo var. makuwa] >TYK00691.1 hypothetical protein E5676_scaffold1371G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 196 bits (498), Expect = 6.46e-63
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0

Query: 1   MTRLKSKKTGQEAKFFPKKEKKSRRRLLITSLQREKEILSKVVVEKSLPSPSKLTPNAST 60
           MTRLKSKKTGQEAKFFPKKEKKSRRRLLITSLQREKEILSKVVVEKSLPSPSKLTPNAST
Sbjct: 1   MTRLKSKKTGQEAKFFPKKEKKSRRRLLITSLQREKEILSKVVVEKSLPSPSKLTPNAST 60

Query: 61  QKDQLKKAVREKEREEFDEDYIFEFMDHYIRKPMEKGIDDIIQC 104
           QKDQLKKAVREKEREEFDEDYIFEFMDHYIRKPMEKGIDDIIQC
Sbjct: 61  QKDQLKKAVREKEREEFDEDYIFEFMDHYIRKPMEKGIDDIIQC 104

BLAST of IVF0006401 vs. NCBI nr
Match: KAA0051346.1 (hypothetical protein E6C27_scaffold55G00680 [Cucumis melo var. makuwa] >TYK23867.1 hypothetical protein E5676_scaffold419G00410 [Cucumis melo var. makuwa])

HSP 1 Score: 89.0 bits (219), Expect = 2.06e-20
Identity = 49/84 (58.33%), Postives = 63/84 (75.00%), Query Frame = 0

Query: 19  KEKKSRRRLLITSLQREKEILSKVVVEKSLPSPSKLTPNASTQKDQLKKAVREKEREEFD 78
           K K+  + ++   L  EKEIL   V +KSLPSPSK T  AST+KD+LKK+VR+KE EE D
Sbjct: 22  KRKEILKEVIHDPLYGEKEILLNKVGKKSLPSPSKSTLKASTRKDKLKKSVRKKEEEEVD 81

Query: 79  EDYIFEFMDHYIRKPMEKGIDDII 102
            DYIF+FM+HYI KPM+KG +D+I
Sbjct: 82  GDYIFKFMNHYIYKPMDKGFEDVI 105

BLAST of IVF0006401 vs. NCBI nr
Match: TYK11947.1 (hypothetical protein E5676_scaffold177G001300 [Cucumis melo var. makuwa])

HSP 1 Score: 76.3 bits (186), Expect = 1.25e-15
Identity = 43/73 (58.90%), Postives = 52/73 (71.23%), Query Frame = 0

Query: 32  LQREKEILSKVVVEKSLPSPSKLTPNASTQKDQLKKAVREKEREEFDEDYIFEFMDHYIR 91
           LQREKE + + V EKSLPS  K  P ASTQ D+LK+AVRE+E  E   DY+F F+D YI 
Sbjct: 9   LQREKEEVPEDVGEKSLPSSGKSIPEASTQLDKLKEAVREEE--EVSADYVFMFIDEYIC 68

Query: 92  KPMEKGIDDIIQC 104
           KP+E+G  DI QC
Sbjct: 69  KPLERGFKDIFQC 79

BLAST of IVF0006401 vs. NCBI nr
Match: TYJ96034.1 (hypothetical protein E5676_scaffold2612G00500 [Cucumis melo var. makuwa])

HSP 1 Score: 78.6 bits (192), Expect = 6.80e-15
Identity = 44/86 (51.16%), Postives = 57/86 (66.28%), Query Frame = 0

Query: 19  KEKKSRRRLLITSLQREKEILSKVVVEKSLPSPSKLTPNASTQKDQLKKAVREKEREEFD 78
           KEK+  +  +   LQ E E+  K   E+SLPSP K  P AST+ D+LKK VRE   EE D
Sbjct: 184 KEKEVLKETIDNPLQGETEVFPKDADERSLPSPPKSIPKASTRLDKLKKVVRE---EEVD 243

Query: 79  EDYIFEFMDHYIRKPMEKGIDDIIQC 104
            +Y F+FMD YI KP+E+G +DI+QC
Sbjct: 244 ANYFFKFMDDYICKPLERGFEDIVQC 266

BLAST of IVF0006401 vs. NCBI nr
Match: KAA0038892.1 (hypothetical protein E6C27_scaffold1170G00580 [Cucumis melo var. makuwa])

HSP 1 Score: 77.4 bits (189), Expect = 2.28e-14
Identity = 44/86 (51.16%), Postives = 56/86 (65.12%), Query Frame = 0

Query: 19  KEKKSRRRLLITSLQREKEILSKVVVEKSLPSPSKLTPNASTQKDQLKKAVREKEREEFD 78
           KEK+  +      LQ E E+  K   E+SLPSP K  P AST+ D+LKK VRE   EE D
Sbjct: 201 KEKEVLKETTDNPLQGETEVFPKDADERSLPSPPKSIPKASTRLDKLKKVVRE---EEVD 260

Query: 79  EDYIFEFMDHYIRKPMEKGIDDIIQC 104
            +Y F+FMD YI KP+E+G +DI+QC
Sbjct: 261 ANYFFKFMDDYICKPLERGFEDIVQC 283

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UCY89.8e-47100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DJV12.2e-1458.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BAP93.0e-1150.57Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7T5Y06.6e-1150.57Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CJ321.1e-1058.90Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0052076.16.46e-63100.00hypothetical protein E6C27_scaffold578G00490 [Cucumis melo var. makuwa] >TYK0069... [more]
KAA0051346.12.06e-2058.33hypothetical protein E6C27_scaffold55G00680 [Cucumis melo var. makuwa] >TYK23867... [more]
TYK11947.11.25e-1558.90hypothetical protein E5676_scaffold177G001300 [Cucumis melo var. makuwa][more]
TYJ96034.16.80e-1551.16hypothetical protein E5676_scaffold2612G00500 [Cucumis melo var. makuwa][more]
KAA0038892.12.28e-1451.16hypothetical protein E6C27_scaffold1170G00580 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..71

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0006401.2IVF0006401.2mRNA