IVF0006367 (gene) Melon (IVF77) v1

Overview


Name	IVF0006367
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Glial fibrillary acidic protein-like
Location	chr02: 15673939 .. 15674919 (-)
RNA-Seq Expression	IVF0006367
Synteny	IVF0006367

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGATACTCACGCGTCTGAGGTCGTTGCCCAATTGATTCCTAACGAAGACTCGTGGGAGAATGTATCTCAATGGTCAGAACATTTTCAACTAGAGTCAGGGTTGAGTTGGCCAAAGAAATTAGAAGTTCCACTTCCAAAGACTTGTCAGTTGGGATTCATCAACAATAACCTGGAAGAGTTAAAAAGTTTATGGGAAAGCTTAATGCCGGAGCAAAGAGCAGAATTTACAAAAGCATATGGAAGCATAGGTGACCTTTTATACACTACCATTAATACATCAACATTGCAAGCTTTGTCACATTTCTGGGACCCTGTGTTGAAGTGTTTCACGTTCAACATGTTCGACTTAACTCCCACTATAGAAGAATATCAAGCACTTATTAGCCTACCGGTTGACAGAGGGAATAAGCTGTATATCTATGATCGAAAATTGACTCTACAACGGTCACTATCAAAGTTTATGGGTGACATTCATGCATCTGAGCTAAAGAAACAGATGAAGACAAAAGAAGATAGGAATTGTATTCCCATCAATTATCTCATCAATCTTGCGCGTGGTTGTTTATTAAGGAAAAAAGGTTTGTCTCTCATCGCATTATGTATCTATGGAACAGTTATTTTTCCTAGAATTAAAGGATATGTTGAAGAAGAGGTTGTTAAGATTTTTGTTGGGATAGAACGAGGGGTAAACCCTATTATCCCAATCATGGCAGAGACTTTCAGATCACTAAATCATTGTCGAATCCAAGGTAAAGGAAAATTCTTCAGCTGTGCTCCAATGCTCTTCATTTGGATTTCCAGTCATTTAAGGTATCCTAATAATTTTGGATATCCTCGAATAAAATTCAGCAGTCCATGGAATAAGACAAGAAACACTATCAGAGAATTCAATAGTGCACACTGCGATCCAAAGGATCCAGAATTTGGGGTTTGGATGCAGTTTTTCAGCCATTTAACGACAATAGAAGAAATTTAG

mRNA sequence

ATGGTAGATACTCACGCGTCTGAGGTCGTTGCCCAATTGATTCCTAACGAAGACTCGTGGGAGAATGTATCTCAATGGTCAGAACATTTTCAACTAGAGTCAGGGTTGAGTTGGCCAAAGAAATTAGAAGTTCCACTTCCAAAGACTTGTCAGTTGGGATTCATCAACAATAACCTGGAAGAGTTAAAAAGTTTATGGGAAAGCTTAATGCCGGAGCAAAGAGCAGAATTTACAAAAGCATATGGAAGCATAGGTGACCTTTTATACACTACCATTAATACATCAACATTGCAAGCTTTGTCACATTTCTGGGACCCTGTGTTGAAGTGTTTCACGTTCAACATGTTCGACTTAACTCCCACTATAGAAGAATATCAAGCACTTATTAGCCTACCGGTTGACAGAGGGAATAAGCTGTATATCTATGATCGAAAATTGACTCTACAACGGTCACTATCAAAGTTTATGGGTGACATTCATGCATCTGAGCTAAAGAAACAGATGAAGACAAAAGAAGATAGGAATTGTATTCCCATCAATTATCTCATCAATCTTGCGCGTGGTTGTTTATTAAGGAAAAAAGGTTTGTCTCTCATCGCATTATGTATCTATGGAACAGTTATTTTTCCTAGAATTAAAGGATATGTTGAAGAAGAGGTTGTTAAGATTTTTGTTGGGATAGAACGAGGGGTAAACCCTATTATCCCAATCATGGCAGAGACTTTCAGATCACTAAATCATTGTCGAATCCAAGGTAAAGGAAAATTCTTCAGCTGTGCTCCAATGCTCTTCATTTGGATTTCCAGTCATTTAAGGTATCCTAATAATTTTGGATATCCTCGAATAAAATTCAGCAGTCCATGGAATAAGACAAGAAACACTATCAGAGAATTCAATAGTGCACACTGCGATCCAAAGGATCCAGAATTTGGGGTTTGGATGCAGTTTTTCAGCCATTTAACGACAATAGAAGAAATTTAG

Coding sequence (CDS)

ATGGTAGATACTCACGCGTCTGAGGTCGTTGCCCAATTGATTCCTAACGAAGACTCGTGGGAGAATGTATCTCAATGGTCAGAACATTTTCAACTAGAGTCAGGGTTGAGTTGGCCAAAGAAATTAGAAGTTCCACTTCCAAAGACTTGTCAGTTGGGATTCATCAACAATAACCTGGAAGAGTTAAAAAGTTTATGGGAAAGCTTAATGCCGGAGCAAAGAGCAGAATTTACAAAAGCATATGGAAGCATAGGTGACCTTTTATACACTACCATTAATACATCAACATTGCAAGCTTTGTCACATTTCTGGGACCCTGTGTTGAAGTGTTTCACGTTCAACATGTTCGACTTAACTCCCACTATAGAAGAATATCAAGCACTTATTAGCCTACCGGTTGACAGAGGGAATAAGCTGTATATCTATGATCGAAAATTGACTCTACAACGGTCACTATCAAAGTTTATGGGTGACATTCATGCATCTGAGCTAAAGAAACAGATGAAGACAAAAGAAGATAGGAATTGTATTCCCATCAATTATCTCATCAATCTTGCGCGTGGTTGTTTATTAAGGAAAAAAGGTTTGTCTCTCATCGCATTATGTATCTATGGAACAGTTATTTTTCCTAGAATTAAAGGATATGTTGAAGAAGAGGTTGTTAAGATTTTTGTTGGGATAGAACGAGGGGTAAACCCTATTATCCCAATCATGGCAGAGACTTTCAGATCACTAAATCATTGTCGAATCCAAGGTAAAGGAAAATTCTTCAGCTGTGCTCCAATGCTCTTCATTTGGATTTCCAGTCATTTAAGGTATCCTAATAATTTTGGATATCCTCGAATAAAATTCAGCAGTCCATGGAATAAGACAAGAAACACTATCAGAGAATTCAATAGTGCACACTGCGATCCAAAGGATCCAGAATTTGGGGTTTGGATGCAGTTTTTCAGCCATTTAACGACAATAGAAGAAATTTAG

Protein sequence

MVDTHASEVVAQLIPNEDSWENVSQWSEHFQLESGLSWPKKLEVPLPKTCQLGFINNNLEELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQALSHFWDPVLKCFTFNMFDLTPTIEEYQALISLPVDRGNKLYIYDRKLTLQRSLSKFMGDIHASELKKQMKTKEDRNCIPINYLINLARGCLLRKKGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPIIPIMAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPRIKFSSPWNKTRNTIREFNSAHCDPKDPEFGVWMQFFSHLTTIEEI

Homology

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BLAST of IVF0006367 vs. ExPASy TrEMBL
Match: A0A5A7VHI3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00080 PE=4 SV=1)

HSP 1 Score: 654.4 bits (1687), Expect = 2.4e-184
Identity = 314/326 (96.32%), Postives = 318/326 (97.55%), Query Frame = 0


Query: 1   MVDTHASEVVAQLIPNEDSWENVSQWSEHFQLESGLSWPKKLEVPLPKTCQLGFINNNLE 60
           MVDTHASEVVAQLIPNEDSW+NVSQWSEHFQLESGLSWPKKLEVPLPKTCQL FINNNLE
Sbjct: 1   MVDTHASEVVAQLIPNEDSWKNVSQWSEHFQLESGLSWPKKLEVPLPKTCQLEFINNNLE 60

Query: 61  ELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQALSHFWDPVLKCFTFNMFDLTP 120
           ELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQALSHFWDPVLK FTFN FDLTP
Sbjct: 61  ELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQALSHFWDPVLKYFTFNTFDLTP 120

Query: 121 TIEEYQALISLPVDRGNKLYIYDRKLTLQRSLSKFMGDIHASELKKQMKTKEDRNCIPIN 180
           TIEEYQALISLPVDRGNKLYIYDRKLTLQRSLSKFMGDIHASELKK MKTKE RNCIPIN
Sbjct: 121 TIEEYQALISLPVDRGNKLYIYDRKLTLQRSLSKFMGDIHASELKKHMKTKEGRNCIPIN 180

Query: 181 YLINLARGCLLRKKGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPIIPIMAE 240
           YLINLARGCLL KKGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNP+IPIMAE
Sbjct: 181 YLINLARGCLLGKKGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPVIPIMAE 240

Query: 241 TFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPRIKFSSPWNKTRNTIREFNS 300
           TFRSLNHC+IQGKGKFFSCAPMLFIWISSHLRYPNNFGYP+IKFSSPWNKTRNTIREFNS
Sbjct: 241 TFRSLNHCQIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIREFNS 300

Query: 301 AHCDPKDPEFGVWMQFFSHLTTIEEI 327
           AH DPKDPEFGVWMQFFSHLTTIE I
Sbjct: 301 AHWDPKDPEFGVWMQFFSHLTTIEAI 326

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BLAST of IVF0006367 vs. ExPASy TrEMBL
Match: A0A5A7SUT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00100 PE=4 SV=1)

HSP 1 Score: 627.5 bits (1617), Expect = 3.2e-176
Identity = 300/313 (95.85%), Postives = 305/313 (97.44%), Query Frame = 0


Query: 1   MVDTHASEVVAQLIPNEDSWENVSQWSEHFQLESGLSWPKKLEVPLPKTCQLGFINNNLE 60
           MVDTHASEVVA LIPNEDSWENVSQWSEHFQLESGLSWPKKLEVPLPKTCQLGFINNNLE
Sbjct: 1   MVDTHASEVVALLIPNEDSWENVSQWSEHFQLESGLSWPKKLEVPLPKTCQLGFINNNLE 60

Query: 61  ELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQALSHFWDPVLKCFTFNMFDLTP 120
           ELKSLWESLMPEQRA+F KAYGSIGDLLYTTINTSTLQALSHFWDPVLKCFTFN FDLTP
Sbjct: 61  ELKSLWESLMPEQRAKFIKAYGSIGDLLYTTINTSTLQALSHFWDPVLKCFTFNTFDLTP 120

Query: 121 TIEEYQALISLPVDRGNKLYIYDRKLTLQRSLSKFMGDIHASELKKQMKTKEDRNCIPIN 180
           TIEEYQALISLPVDRGNKLYIY RKLTLQRSLSKFMGDIHASELKKQMKTKE RNCIPIN
Sbjct: 121 TIEEYQALISLPVDRGNKLYIYHRKLTLQRSLSKFMGDIHASELKKQMKTKEGRNCIPIN 180

Query: 181 YLINLARGCLLRKKGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPIIPIMAE 240
           YLINLARGCLL KKGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNP+IPIMAE
Sbjct: 181 YLINLARGCLLGKKGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPVIPIMAE 240

Query: 241 TFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPRIKFSSPWNKTRNTIREFNS 300
           TFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYP+IKF+SPWNKTRNTIREFNS
Sbjct: 241 TFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFNSPWNKTRNTIREFNS 300

Query: 301 AHCDPKDPEFGVW 314
           AH DPKDPEFG +
Sbjct: 301 AHWDPKDPEFGAY 313

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BLAST of IVF0006367 vs. ExPASy TrEMBL
Match: A0A5A7TXA1 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001520 PE=4 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 2.1e-151
Identity = 264/272 (97.06%), Postives = 266/272 (97.79%), Query Frame = 0


Query: 1   MVDTHASEVVAQLIPNEDSWENVSQWSEHFQLESGLSWPKKLEVPLPKTCQLGFINNNLE 60
           MVDTHASEVVAQLIPNEDSWENVSQWSEHFQL+SG SWPKKLEVPLPKTCQLGFINNNLE
Sbjct: 1   MVDTHASEVVAQLIPNEDSWENVSQWSEHFQLKSGSSWPKKLEVPLPKTCQLGFINNNLE 60

Query: 61  ELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQALSHFWDPVLKCFTFNMFDLTP 120
           ELKSLWESLMPEQRAEFTKAYGSI DLLYTTINTSTLQALSHFWDPVLKCFTFN FDLTP
Sbjct: 61  ELKSLWESLMPEQRAEFTKAYGSICDLLYTTINTSTLQALSHFWDPVLKCFTFNTFDLTP 120

Query: 121 TIEEYQALISLPVDRGNKLYIYDRKLTLQRSLSKFMGDIHASELKKQMKTKEDRNCIPIN 180
           TIEEYQALISLPVDRGN LYIYDRKLTLQRSLSKFMGDIHASELKKQMKTKE RNCIPIN
Sbjct: 121 TIEEYQALISLPVDRGNNLYIYDRKLTLQRSLSKFMGDIHASELKKQMKTKEGRNCIPIN 180

Query: 181 YLINLARGCLLRKKGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPIIPIMAE 240
           YLINLARGCLLRK GLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNP+IPIMAE
Sbjct: 181 YLINLARGCLLRKNGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPVIPIMAE 240

Query: 241 TFRSLNHCRIQGKGKFFSCAPMLFIWISSHLR 273
           TFRSLNHCRIQGKGKFFSCAPMLFIWISSHLR
Sbjct: 241 TFRSLNHCRIQGKGKFFSCAPMLFIWISSHLR 272

[Close]

BLAST of IVF0006367 vs. ExPASy TrEMBL
Match: A0A5D3D0S2 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G001090 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.6e-111
Identity = 194/212 (91.51%), Postives = 203/212 (95.75%), Query Frame = 0


Query: 115 MFDLTPTIEEYQALISLPVDRGNKLYIYDRKLTLQRSLSKFMGDIHASELKKQMKTKEDR 174
           MFDLTPTIEEY+ALISLP+DRGNKLYIYDRKLT++RSLSKFMGDIHASELKKQ+K KE R
Sbjct: 1   MFDLTPTIEEYEALISLPIDRGNKLYIYDRKLTIERSLSKFMGDIHASELKKQIKAKEGR 60

Query: 175 NCIPINYLINLARGCLLRKKGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPI 234
           NCIPINYLINLARGCL RKKGLSLIALCIYGT+IFPRIKGYVEEEVVKIFVGIERGVNP+
Sbjct: 61  NCIPINYLINLARGCLSRKKGLSLIALCIYGTIIFPRIKGYVEEEVVKIFVGIERGVNPV 120

Query: 235 IPIMAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPRIKFSSPWNKTRNT 294
           IPIM ETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGY +IKFSSPWN TRNT
Sbjct: 121 IPIMTETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNT 180

Query: 295 IREFNSAHCDPKDPEFGVWMQFFSHLTTIEEI 327
           IREFNSAH DPKD EFGVWMQFFSHLTTI+ I
Sbjct: 181 IREFNSAHWDPKDTEFGVWMQFFSHLTTIDAI 212

[Close]

BLAST of IVF0006367 vs. ExPASy TrEMBL
Match: A0A5A7UWQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G002420 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 8.6e-81
Identity = 143/305 (46.89%), Postives = 203/305 (66.56%), Query Frame = 0


Query: 18  DSWENVSQWSEHFQLESGLSWPKKLEVPLPKTCQLGFINNNLEELKSLWESLMPEQRAEF 77
           D   +V +W+E  Q + G       ++ +   CQL F  N+L  LK +WE+L P++R  F
Sbjct: 15  DEPSDVLKWAEEMQQKFGDDINNSSQISVLSRCQLSFTQNDLANLKMIWEALTPQRRFMF 74

Query: 78  TKAYGSIGDLLYTTINTSTLQALSHFWDPVLKCFTFNMFDLTPTIEEYQALISLPVDRGN 137
           +K YG I +L+Y  +N   L+A+ +FWDP   CFTF   DL PTIEEYQA++S+P     
Sbjct: 75  SKKYGHIVELMYIPVNYFALRAIINFWDPAYGCFTFGSCDLLPTIEEYQAMLSMPEKERE 134

Query: 138 KLYIYDRKLTLQRSLSKFMGDIHASELKKQMKTKEDRNCIPINYLINLARGCLLRKKGLS 197
            +Y ++ K T +R+LSKF+  +HA+E++K +K K     +P +YLI + +  +   KGL+
Sbjct: 135 IVYFFNPKQTTKRTLSKFLETVHAAEIQKYIKIKGGEENVPFDYLIKMTQTYVDEDKGLT 194

Query: 198 LIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPIIPIMAETFRSLNHCRIQGKGKFF 257
           L+ALCIYG VIFP+ +GYV+ +V+K+F  +ERGVNPIIPI+AETFRSLN+CR +G+GK  
Sbjct: 195 LLALCIYGAVIFPKAEGYVDGKVIKLFFEMERGVNPIIPILAETFRSLNYCRNKGEGKLN 254

Query: 258 SCAPMLFIWISSHLRYPNNFGYPRIKFSSPWNKTRNTIREFNSAHCDPKDPEFGVWMQFF 317
            C P+L+IWI SH+++P  F  PR+ FSSPWN  RNTI EF  A  DP  P    W+ FF
Sbjct: 255 CCLPLLYIWIHSHIKFPAEFRCPRLDFSSPWNLIRNTISEFGMAVWDPTYPRKEAWLSFF 314

Query: 318 SHLTT 323
           + LT+
Sbjct: 315 AKLTS 319

[Close]

BLAST of IVF0006367 vs. NCBI nr
Match: KAA0065295.1 (uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 652 bits (1683), Expect = 2.84e-235
Identity = 314/326 (96.32%), Postives = 318/326 (97.55%), Query Frame = 0


Query: 1   MVDTHASEVVAQLIPNEDSWENVSQWSEHFQLESGLSWPKKLEVPLPKTCQLGFINNNLE 60
           MVDTHASEVVAQLIPNEDSW+NVSQWSEHFQLESGLSWPKKLEVPLPKTCQL FINNNLE
Sbjct: 1   MVDTHASEVVAQLIPNEDSWKNVSQWSEHFQLESGLSWPKKLEVPLPKTCQLEFINNNLE 60

Query: 61  ELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQALSHFWDPVLKCFTFNMFDLTP 120
           ELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQALSHFWDPVLK FTFN FDLTP
Sbjct: 61  ELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQALSHFWDPVLKYFTFNTFDLTP 120

Query: 121 TIEEYQALISLPVDRGNKLYIYDRKLTLQRSLSKFMGDIHASELKKQMKTKEDRNCIPIN 180
           TIEEYQALISLPVDRGNKLYIYDRKLTLQRSLSKFMGDIHASELKK MKTKE RNCIPIN
Sbjct: 121 TIEEYQALISLPVDRGNKLYIYDRKLTLQRSLSKFMGDIHASELKKHMKTKEGRNCIPIN 180

Query: 181 YLINLARGCLLRKKGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPIIPIMAE 240
           YLINLARGCLL KKGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNP+IPIMAE
Sbjct: 181 YLINLARGCLLGKKGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPVIPIMAE 240

Query: 241 TFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPRIKFSSPWNKTRNTIREFNS 300
           TFRSLNHC+IQGKGKFFSCAPMLFIWISSHLRYPNNFGYP+IKFSSPWNKTRNTIREFNS
Sbjct: 241 TFRSLNHCQIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIREFNS 300

Query: 301 AHCDPKDPEFGVWMQFFSHLTTIEEI 326
           AH DPKDPEFGVWMQFFSHLTTIE I
Sbjct: 301 AHWDPKDPEFGVWMQFFSHLTTIEAI 326

[Close]

BLAST of IVF0006367 vs. NCBI nr
Match: KAA0033221.1 (uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 626 bits (1615), Expect = 3.12e-205
Identity = 300/313 (95.85%), Postives = 305/313 (97.44%), Query Frame = 0


Query: 1   MVDTHASEVVAQLIPNEDSWENVSQWSEHFQLESGLSWPKKLEVPLPKTCQLGFINNNLE 60
           MVDTHASEVVA LIPNEDSWENVSQWSEHFQLESGLSWPKKLEVPLPKTCQLGFINNNLE
Sbjct: 1   MVDTHASEVVALLIPNEDSWENVSQWSEHFQLESGLSWPKKLEVPLPKTCQLGFINNNLE 60

Query: 61  ELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQALSHFWDPVLKCFTFNMFDLTP 120
           ELKSLWESLMPEQRA+F KAYGSIGDLLYTTINTSTLQALSHFWDPVLKCFTFN FDLTP
Sbjct: 61  ELKSLWESLMPEQRAKFIKAYGSIGDLLYTTINTSTLQALSHFWDPVLKCFTFNTFDLTP 120

Query: 121 TIEEYQALISLPVDRGNKLYIYDRKLTLQRSLSKFMGDIHASELKKQMKTKEDRNCIPIN 180
           TIEEYQALISLPVDRGNKLYIY RKLTLQRSLSKFMGDIHASELKKQMKTKE RNCIPIN
Sbjct: 121 TIEEYQALISLPVDRGNKLYIYHRKLTLQRSLSKFMGDIHASELKKQMKTKEGRNCIPIN 180

Query: 181 YLINLARGCLLRKKGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPIIPIMAE 240
           YLINLARGCLL KKGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNP+IPIMAE
Sbjct: 181 YLINLARGCLLGKKGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPVIPIMAE 240

Query: 241 TFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPRIKFSSPWNKTRNTIREFNS 300
           TFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYP+IKF+SPWNKTRNTIREFNS
Sbjct: 241 TFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFNSPWNKTRNTIREFNS 300

Query: 301 AHCDPKDPEFGVW 313
           AH DPKDPEFG +
Sbjct: 301 AHWDPKDPEFGAY 313

[Close]

BLAST of IVF0006367 vs. NCBI nr
Match: KAA0046606.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 544 bits (1401), Expect = 4.24e-191
Identity = 264/272 (97.06%), Postives = 266/272 (97.79%), Query Frame = 0


Query: 1   MVDTHASEVVAQLIPNEDSWENVSQWSEHFQLESGLSWPKKLEVPLPKTCQLGFINNNLE 60
           MVDTHASEVVAQLIPNEDSWENVSQWSEHFQL+SG SWPKKLEVPLPKTCQLGFINNNLE
Sbjct: 1   MVDTHASEVVAQLIPNEDSWENVSQWSEHFQLKSGSSWPKKLEVPLPKTCQLGFINNNLE 60

Query: 61  ELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQALSHFWDPVLKCFTFNMFDLTP 120
           ELKSLWESLMPEQRAEFTKAYGSI DLLYTTINTSTLQALSHFWDPVLKCFTFN FDLTP
Sbjct: 61  ELKSLWESLMPEQRAEFTKAYGSICDLLYTTINTSTLQALSHFWDPVLKCFTFNTFDLTP 120

Query: 121 TIEEYQALISLPVDRGNKLYIYDRKLTLQRSLSKFMGDIHASELKKQMKTKEDRNCIPIN 180
           TIEEYQALISLPVDRGN LYIYDRKLTLQRSLSKFMGDIHASELKKQMKTKE RNCIPIN
Sbjct: 121 TIEEYQALISLPVDRGNNLYIYDRKLTLQRSLSKFMGDIHASELKKQMKTKEGRNCIPIN 180

Query: 181 YLINLARGCLLRKKGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPIIPIMAE 240
           YLINLARGCLLRK GLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNP+IPIMAE
Sbjct: 181 YLINLARGCLLRKNGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPVIPIMAE 240

Query: 241 TFRSLNHCRIQGKGKFFSCAPMLFIWISSHLR 272
           TFRSLNHCRIQGKGKFFSCAPMLFIWISSHLR
Sbjct: 241 TFRSLNHCRIQGKGKFFSCAPMLFIWISSHLR 272

[Close]

BLAST of IVF0006367 vs. NCBI nr
Match: TYK16834.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 411 bits (1057), Expect = 2.56e-136
Identity = 194/212 (91.51%), Postives = 203/212 (95.75%), Query Frame = 0


Query: 115 MFDLTPTIEEYQALISLPVDRGNKLYIYDRKLTLQRSLSKFMGDIHASELKKQMKTKEDR 174
           MFDLTPTIEEY+ALISLP+DRGNKLYIYDRKLT++RSLSKFMGDIHASELKKQ+K KE R
Sbjct: 1   MFDLTPTIEEYEALISLPIDRGNKLYIYDRKLTIERSLSKFMGDIHASELKKQIKAKEGR 60

Query: 175 NCIPINYLINLARGCLLRKKGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPI 234
           NCIPINYLINLARGCL RKKGLSLIALCIYGT+IFPRIKGYVEEEVVKIFVGIERGVNP+
Sbjct: 61  NCIPINYLINLARGCLSRKKGLSLIALCIYGTIIFPRIKGYVEEEVVKIFVGIERGVNPV 120

Query: 235 IPIMAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPRIKFSSPWNKTRNT 294
           IPIM ETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGY +IKFSSPWN TRNT
Sbjct: 121 IPIMTETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNT 180

Query: 295 IREFNSAHCDPKDPEFGVWMQFFSHLTTIEEI 326
           IREFNSAH DPKD EFGVWMQFFSHLTTI+ I
Sbjct: 181 IREFNSAHWDPKDTEFGVWMQFFSHLTTIDAI 212

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BLAST of IVF0006367 vs. NCBI nr
Match: KAA0060423.1 (uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa])

HSP 1 Score: 309 bits (792), Expect = 6.37e-97
Identity = 143/305 (46.89%), Postives = 203/305 (66.56%), Query Frame = 0


Query: 18  DSWENVSQWSEHFQLESGLSWPKKLEVPLPKTCQLGFINNNLEELKSLWESLMPEQRAEF 77
           D   +V +W+E  Q + G       ++ +   CQL F  N+L  LK +WE+L P++R  F
Sbjct: 15  DEPSDVLKWAEEMQQKFGDDINNSSQISVLSRCQLSFTQNDLANLKMIWEALTPQRRFMF 74

Query: 78  TKAYGSIGDLLYTTINTSTLQALSHFWDPVLKCFTFNMFDLTPTIEEYQALISLPVDRGN 137
           +K YG I +L+Y  +N   L+A+ +FWDP   CFTF   DL PTIEEYQA++S+P     
Sbjct: 75  SKKYGHIVELMYIPVNYFALRAIINFWDPAYGCFTFGSCDLLPTIEEYQAMLSMPEKERE 134

Query: 138 KLYIYDRKLTLQRSLSKFMGDIHASELKKQMKTKEDRNCIPINYLINLARGCLLRKKGLS 197
            +Y ++ K T +R+LSKF+  +HA+E++K +K K     +P +YLI + +  +   KGL+
Sbjct: 135 IVYFFNPKQTTKRTLSKFLETVHAAEIQKYIKIKGGEENVPFDYLIKMTQTYVDEDKGLT 194

Query: 198 LIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPIIPIMAETFRSLNHCRIQGKGKFF 257
           L+ALCIYG VIFP+ +GYV+ +V+K+F  +ERGVNPIIPI+AETFRSLN+CR +G+GK  
Sbjct: 195 LLALCIYGAVIFPKAEGYVDGKVIKLFFEMERGVNPIIPILAETFRSLNYCRNKGEGKLN 254

Query: 258 SCAPMLFIWISSHLRYPNNFGYPRIKFSSPWNKTRNTIREFNSAHCDPKDPEFGVWMQFF 317
            C P+L+IWI SH+++P  F  PR+ FSSPWN  RNTI EF  A  DP  P    W+ FF
Sbjct: 255 CCLPLLYIWIHSHIKFPAEFRCPRLDFSSPWNLIRNTISEFGMAVWDPTYPRKEAWLSFF 314

Query: 318 SHLTT 322
           + LT+
Sbjct: 315 AKLTS 319

The following BLAST results are available for this feature:

BLAST of IVF0006367 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0006367 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VHI3	2.4e-184	96.32	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7SUT0	3.2e-176	95.85	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84...	[more]
A0A5A7TXA1	2.1e-151	97.06	Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3D0S2	1.6e-111	91.51	Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7UWQ6	8.6e-81	46.89	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of IVF0006367 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065295.1	2.84e-235	96.32	uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa]	[more]
KAA0033221.1	3.12e-205	95.85	uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]	[more]
KAA0046606.1	4.24e-191	97.06	glial fibrillary acidic protein-like [Cucumis melo var. makuwa]	[more]
TYK16834.1	2.56e-136	91.51	glial fibrillary acidic protein-like [Cucumis melo var. makuwa]	[more]
KAA0060423.1	6.37e-97	46.89	uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0006367 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR48200	PROTEIN, PUTATIVE-RELATED	coord: 60..276

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0006367.2	IVF0006367.2	mRNA