IVF0006251 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTTGCCTGGACCGATACATGATTTTCTTGTAGTCTTGTTGGGATCAGGTCTTATATTAGGAAGTATGGGAGTACTATTATTTAACAACTCCATTTATTCTGCTTTTTCGTTGGGACTGGTTCTTGTTTCTATATCCTTATTCTATATTCTAGCAAACGCCCAGTTTGTAGCTGCTGCGCAACTCCTTATTTACGTGGGAGCTATAAATGTTTTAATCATATTTGCTGTGATGTTCATGAAGGGTTCAGAATATTCCAAAGATTTTAATCTTTGGACCGTTGGGAATGGAGTTACTTTTCTGGTTTGTACAAGTATTTTTGTTTCACTAATGACTACTATTGTAGATACGTCATGGTATGGGATTATTTGGACTACAAGATCAAATCAGATTCTAGAGCAAGATTTAATAAGTAATAGTCAACAAATTGGAATTTATTTATCAACATATTTTTTTCTTCCATTTGAACTCATTTCGATCATTCTTTTAGCTGCTTTGATCGGCGCAATTTCCGTGGCTCGCCAGTAA ATGGATTTGCCTGGACCGATACATGATTTTCTTGTAGTCTTGTTGGGATCAGGTCTTATATTAGGAAGTATGGGAGTACTATTATTTAACAACTCCATTTATTCTGCTTTTTCGTTGGGACTGGTTCTTGTTTCTATATCCTTATTCTATATTCTAGCAAACGCCCAGTTTGTAGCTGCTGCGCAACTCCTTATTTACGTGGGAGCTATAAATGTTTTAATCATATTTGCTGTGATGTTCATGAAGGGTTCAGAATATTCCAAAGATTTTAATCTTTGGACCGTTGGGAATGGAGTTACTTTTCTGGTTTGTACAAGTATTTTTGTTTCACTAATGACTACTATTGTAGATACGTCATGGTATGGGATTATTTGGACTACAAGATCAAATCAGATTCTAGAGCAAGATTTAATAAGTAATAGTCAACAAATTGGAATTTATTTATCAACATATTTTTTTCTTCCATTTGAACTCATTTCGATCATTCTTTTAGCTGCTTTGATCGGCGCAATTTCCGTGGCTCGCCAGTAA ATGGATTTGCCTGGACCGATACATGATTTTCTTGTAGTCTTGTTGGGATCAGGTCTTATATTAGGAAGTATGGGAGTACTATTATTTAACAACTCCATTTATTCTGCTTTTTCGTTGGGACTGGTTCTTGTTTCTATATCCTTATTCTATATTCTAGCAAACGCCCAGTTTGTAGCTGCTGCGCAACTCCTTATTTACGTGGGAGCTATAAATGTTTTAATCATATTTGCTGTGATGTTCATGAAGGGTTCAGAATATTCCAAAGATTTTAATCTTTGGACCGTTGGGAATGGAGTTACTTTTCTGGTTTGTACAAGTATTTTTGTTTCACTAATGACTACTATTGTAGATACGTCATGGTATGGGATTATTTGGACTACAAGATCAAATCAGATTCTAGAGCAAGATTTAATAAGTAATAGTCAACAAATTGGAATTTATTTATCAACATATTTTTTTCTTCCATTTGAACTCATTTCGATCATTCTTTTAGCTGCTTTGATCGGCGCAATTTCCGTGGCTCGCCAGTAA MDLPGPIHDFLVVLLGSGLILGSMGVLLFNNSIYSAFSLGLVLVSISLFYILANAQFVAAAQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGNGVTFLVCTSIFVSLMTTIVDTSWYGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAISVARQ Homology
BLAST of IVF0006251 vs. ExPASy Swiss-Prot
Match: Q2QD38 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhG PE=3 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 3.2e-87 Identity = 175/176 (99.43%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of IVF0006251 vs. ExPASy Swiss-Prot
Match: Q2L958 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Gossypium hirsutum OX=3635 GN=ndhG PE=3 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 9.0e-74 Identity = 148/176 (84.09%), Postives = 162/176 (92.05%), Query Frame = 0
BLAST of IVF0006251 vs. ExPASy Swiss-Prot
Match: Q49KU5 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ndhG PE=3 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 1.2e-73 Identity = 148/176 (84.09%), Postives = 162/176 (92.05%), Query Frame = 0
BLAST of IVF0006251 vs. ExPASy Swiss-Prot
Match: Q0ZIW5 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhG PE=3 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 2.6e-73 Identity = 149/176 (84.66%), Postives = 161/176 (91.48%), Query Frame = 0
BLAST of IVF0006251 vs. ExPASy Swiss-Prot
Match: Q09MC3 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Citrus sinensis OX=2711 GN=ndhG PE=3 SV=1) HSP 1 Score: 275.4 bits (703), Expect = 4.5e-73 Identity = 147/178 (82.58%), Postives = 165/178 (92.70%), Query Frame = 0
BLAST of IVF0006251 vs. ExPASy TrEMBL
Match: A0A249RZE0 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=ndhG PE=3 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 5.3e-85 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of IVF0006251 vs. ExPASy TrEMBL
Match: A0A1S4EU65 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cucumis melo OX=3656 GN=ndhG PE=3 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 5.3e-85 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of IVF0006251 vs. ExPASy TrEMBL
Match: A0A249RXZ2 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cucumis melo subsp. agrestis OX=217619 GN=ndhG PE=3 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 5.3e-85 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of IVF0006251 vs. ExPASy TrEMBL
Match: A0A286NG51 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cucumis melo var. flexuosus OX=1120798 GN=ndhG PE=3 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 5.3e-85 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of IVF0006251 vs. ExPASy TrEMBL
Match: A0A249RZ82 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cucumis melo var. dudaim OX=2034236 GN=ndhG PE=3 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 5.3e-85 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of IVF0006251 vs. NCBI nr
Match: YP_004841838.1 (NADH-plastoquinone oxidoreductase subunit 6 [Cucumis melo subsp. melo] >YP_009860128.1 NADH-plastoquinone oxidoreductase subunit 6 [Cucumis melo subsp. agrestis] >ASY96657.1 NADH dehydrogenase subunit 6 [Cucumis melo var. conomon] >ASY96744.1 NADH dehydrogenase subunit 6 [Cucumis melo var. makuwa] >ASY96831.1 NADH dehydrogenase subunit 6 [Cucumis melo var. momordica] >ASY96918.1 NADH dehydrogenase subunit 6 [Cucumis melo var. dudaim] >ASY97005.1 NADH dehydrogenase subunit 6 [Cucumis melo var. cantalupo] >ASY97179.1 NADH dehydrogenase subunit 6 [Cucumis melo var. inodorus] >ASY97353.1 NADH dehydrogenase subunit 6 [Cucumis melo var. flexuosus] >QJF46439.1 NADH dehydrogenase subunit 6 [Cucumis melo]) HSP 1 Score: 322 bits (826), Expect = 1.31e-110 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of IVF0006251 vs. NCBI nr
Match: YP_009004094.1 (NADH-plastoquinone oxidoreductase subunit 6 [Cucumis hystrix] >YP_009326043.1 NADH dehydrogenase subunit 6 [Citrullus lanatus] >YP_009346530.1 NADH-plastoquinone oxidoreductase subunit 6 [Cucumis x hytivus] >YP_009348085.1 NADH dehydrogenase subunit 6 [Citrullus mucosospermus] >YP_009420848.1 NADH dehydrogenase subunit 6 [Citrullus colocynthis] >YP_009431610.1 NADH dehydrogenase subunit 6 [Citrullus amarus] >YP_009431696.1 NADH dehydrogenase subunit 6 [Citrullus rehmii] >Q2QD38.1 RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic; AltName: Full=NAD(P)H dehydrogenase subunit 6; AltName: Full=NADH-plastoquinone oxidoreductase subunit 6 [Cucumis sativus] >ALF03354.1 NADH dehydrogenase subunit 6 [Cucumis sativus var. hardwickii] >APW82516.1 NADH dehydrogenase subunit 6 [Citrullus lanatus subsp. vulgaris] >ASY96396.1 NADH dehydrogenase subunit 6 [Cucumis melo subsp. agrestis] >AVE15385.1 NdhG [Cucumis sativus var. sativus] >QZL38648.1 NADH dehydrogenase subunit G [Citrullus naudinianus] >QZL38736.1 NADH dehydrogenase subunit G [Citrullus ecirrhosus]) HSP 1 Score: 321 bits (823), Expect = 3.77e-110 Identity = 175/176 (99.43%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of IVF0006251 vs. NCBI nr
Match: YP_009456200.1 (NADH dehydrogenase subunit 6 [Lagenaria siceraria] >AUJ21965.1 NADH dehydrogenase subunit 6 [Lagenaria siceraria] >QNM38585.1 NADH-plastoquinone oxidoreductase subunit 6 [Lagenaria siceraria var. microcarpa]) HSP 1 Score: 321 bits (822), Expect = 5.35e-110 Identity = 174/176 (98.86%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of IVF0006251 vs. NCBI nr
Match: QHB76018.1 (NADH dehydrogenase subunit 6 [Cucumis melo subsp. melo]) HSP 1 Score: 320 bits (821), Expect = 7.60e-110 Identity = 174/176 (98.86%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of IVF0006251 vs. NCBI nr
Match: YP_010131145.1 (NADH-plastoquinone oxidoreductase subunit 6 [Benincasa hispida] >QPZ75793.1 NADH-plastoquinone oxidoreductase subunit 6 [Benincasa hispida] >QSQ72364.1 NADH dehydrogenase subunit G [Benincasa hispida]) HSP 1 Score: 320 bits (821), Expect = 7.60e-110 Identity = 174/176 (98.86%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of IVF0006251 vs. TAIR 10
Match: ATCG01080.1 (NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 ) HSP 1 Score: 263.8 bits (673), Expect = 9.6e-71 Identity = 141/176 (80.11%), Postives = 157/176 (89.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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