IVF0006242 (gene) Melon (IVF77) v1

Overview
NameIVF0006242
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLon protease 2-like
Locationchr09: 15622963 .. 15623256 (+)
RNA-Seq ExpressionIVF0006242
SyntenyIVF0006242
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGACTGAAGATGACGACTGGTTGGAGACCGAAGATGACGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGAACGAAGGCGTCGTTGGAGGCGGAACAAGGCGTCGTGCGGAAGAAGGCGTCGTGCGAGAAGGCGTTCTTGAGAATGGTAAGGCGGAAGAAGTGAGAAAATCGTGGAGAATATATTGGAGAGGGAGAAAATCACGCAGACGAATGGAGGAGAAGAAATTCGCGCCAGGATTGTTTTTAAAACAAGGGTAA

mRNA sequence

ATGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGACTGAAGATGACGACTGGTTGGAGACCGAAGATGACGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGAACGAAGGCGTCGTTGGAGGCGGAACAAGGCGTCGTGCGGAAGAAGGCGTCGTGCGAGAAGGCGTTCTTGAGAATGGTAAGGCGGAAGAAGTGAGAAAATCGTGGAGAATATATTGGAGAGGGAGAAAATCACGCAGACGAATGGAGGAGAAGAAATTCGCGCCAGGATTGTTTTTAAAACAAGGGTAA

Coding sequence (CDS)

ATGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGACTGAAGATGACGACTGGTTGGAGACCGAAGATGACGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGAACGAAGGCGTCGTTGGAGGCGGAACAAGGCGTCGTGCGGAAGAAGGCGTCGTGCGAGAAGGCGTTCTTGAGAATGGTAAGGCGGAAGAAGTGAGAAAATCGTGGAGAATATATTGGAGAGGGAGAAAATCACGCAGACGAATGGAGGAGAAGAAATTCGCGCCAGGATTGTTTTTAAAACAAGGGTAA

Protein sequence

MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEANEGVVGGGTRRRAEEGVVREGVLENGKAEEVRKSWRIYWRGRKSRRRMEEKKFAPGLFLKQG
Homology
BLAST of IVF0006242 vs. ExPASy TrEMBL
Match: A0A5A7SHI4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001610 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.4e-31
Identity = 76/97 (78.35%), Postives = 80/97 (82.47%), Query Frame = 0

Query: 1   MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEANEGVVGGGTRRRAEEGVVREGVLEN 60
           +VGGGRSC        GWRPKMTTGWR+KKASLEA EG+VGGG RRRAE     EGVLEN
Sbjct: 86  VVGGGRSC--------GWRPKMTTGWRQKKASLEAKEGIVGGGRRRRAE-----EGVLEN 145

Query: 61  GKAEEVRKSWRIYWRGRKSRRRMEEKKFAPGLFLKQG 98
           GKAEE RKSWRIYWRGRKSRRRMEE+KFAPG FLKQG
Sbjct: 146 GKAEEGRKSWRIYWRGRKSRRRMEEEKFAPGFFLKQG 169

BLAST of IVF0006242 vs. ExPASy TrEMBL
Match: A0A5A7TUB6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold466G00040 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.6e-22
Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0

Query: 1  MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEANEGVVGGGTRRRAEEGVVRE 56
          MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEANEGVVGGGTRRRAEEGVVR+
Sbjct: 1  MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEANEGVVGGGTRRRAEEGVVRK 55

BLAST of IVF0006242 vs. ExPASy TrEMBL
Match: A0A5D3CTI7 (Lon protease 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G00120 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.1e-18
Identity = 60/98 (61.22%), Postives = 65/98 (66.33%), Query Frame = 0

Query: 14 MTTGWRPKMTT--------------GWRRKKASLEANEGVVGGGTRRRAEEGVVREGVLE 73
          M TGWR K  +               WRRKK  LEA EGVVGGG RRRA+EGV+    +E
Sbjct: 1  MMTGWRRKKASLEAEEGVVGGRIRRRWRRKKTFLEAEEGVVGGGRRRRAKEGVLN---VE 60

Query: 74 NGKAEEVRKSWRIYWRGRKSRRRMEEKKFAPGLFLKQG 98
          NGK EE RKSWRIYWRGRKSRR MEE+KFA   FLKQG
Sbjct: 61 NGKDEEGRKSWRIYWRGRKSRRGMEEEKFASVFFLKQG 95

BLAST of IVF0006242 vs. ExPASy TrEMBL
Match: A0A5D3CCS9 (50S ribosomal protein L15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001030 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 8.9e-18
Identity = 63/102 (61.76%), Postives = 64/102 (62.75%), Query Frame = 0

Query: 25  GWRRKKA----------------SLEANEGVVGG-------------GTRRRAEEGVVRE 84
           GWRRKK                  LEA EGVVGG             G RRRAE     E
Sbjct: 8   GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAE-----E 67

Query: 85  GVLENGKAEEVRKSWRIYWRGRKSRRRMEEKKFAPGLFLKQG 98
           GVLENGKAEEVRKSWRIYWRGRKSRRRMEE+KFAPGLFLKQG
Sbjct: 68  GVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG 104

BLAST of IVF0006242 vs. ExPASy TrEMBL
Match: A0A5A7TVG1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00760 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 9.0e-10
Identity = 40/69 (57.97%), Postives = 45/69 (65.22%), Query Frame = 0

Query: 22 MTTGWRRKKASLEANEGVVGGGTRRRAEEGVVREGVLENGKAEEVRKSWRIYWRGRKSRR 81
          MTTGWR+KK  LEA EGV+                 +ENGK E+ RKSWRIYWRGRKSRR
Sbjct: 1  MTTGWRQKKLWLEAEEGVLN----------------VENGKDEKGRKSWRIYWRGRKSRR 53

Query: 82 RMEEKKFAP 91
           MEE+KF P
Sbjct: 61 GMEEEKFTP 53

BLAST of IVF0006242 vs. NCBI nr
Match: KAA0025306.1 (hypothetical protein E6C27_scaffold541G001610 [Cucumis melo var. makuwa])

HSP 1 Score: 141 bits (356), Expect = 1.57e-40
Identity = 76/97 (78.35%), Postives = 80/97 (82.47%), Query Frame = 0

Query: 1   MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEANEGVVGGGTRRRAEEGVVREGVLEN 60
           +VGGGRSCGW        RPKMTTGWR+KKASLEA EG+VGGG RRRAE     EGVLEN
Sbjct: 86  VVGGGRSCGW--------RPKMTTGWRQKKASLEAKEGIVGGGRRRRAE-----EGVLEN 145

Query: 61  GKAEEVRKSWRIYWRGRKSRRRMEEKKFAPGLFLKQG 97
           GKAEE RKSWRIYWRGRKSRRRMEE+KFAPG FLKQG
Sbjct: 146 GKAEEGRKSWRIYWRGRKSRRRMEEEKFAPGFFLKQG 169

BLAST of IVF0006242 vs. NCBI nr
Match: KAA0047052.1 (hypothetical protein E6C27_scaffold466G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 110 bits (276), Expect = 1.52e-28
Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0

Query: 1  MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEANEGVVGGGTRRRAEEGVVRE 55
          MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEANEGVVGGGTRRRAEEGVVR+
Sbjct: 1  MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEANEGVVGGGTRRRAEEGVVRK 55

BLAST of IVF0006242 vs. NCBI nr
Match: KAA0063229.1 (lon protease 2-like [Cucumis melo var. makuwa] >TYK13479.1 lon protease 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 100 bits (248), Expect = 1.23e-22
Identity = 64/95 (67.37%), Postives = 66/95 (69.47%), Query Frame = 0

Query: 22 MTTGWRRKKASLEANEGVVGGGTRRR---------AEEGVV--------REGVL--ENGK 81
          M TGWRRKKASLEA EGVVGG  RRR         AEEGVV        +EGVL  ENGK
Sbjct: 1  MMTGWRRKKASLEAEEGVVGGRIRRRWRRKKTFLEAEEGVVGGGRRRRAKEGVLNVENGK 60

Query: 82 AEEVRKSWRIYWRGRKSRRRMEEKKFAPGLFLKQG 97
           EE RKSWRIYWRGRKSRR MEE+KFA   FLKQG
Sbjct: 61 DEEGRKSWRIYWRGRKSRRGMEEEKFASVFFLKQG 95

BLAST of IVF0006242 vs. NCBI nr
Match: KAA0034559.1 (50S ribosomal protein L15 [Cucumis melo var. makuwa] >TYK09112.1 50S ribosomal protein L15 [Cucumis melo var. makuwa])

HSP 1 Score: 97.8 bits (242), Expect = 9.82e-22
Identity = 63/102 (61.76%), Postives = 64/102 (62.75%), Query Frame = 0

Query: 25  GWRRKKASLE----------------ANEGVVGG-------------GTRRRAEEGVVRE 84
           GWRRKK  LE                A EGVVGG             G RRRAE     E
Sbjct: 8   GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASCGRRRRAE-----E 67

Query: 85  GVLENGKAEEVRKSWRIYWRGRKSRRRMEEKKFAPGLFLKQG 97
           GVLENGKAEEVRKSWRIYWRGRKSRRRMEE+KFAPGLFLKQG
Sbjct: 68  GVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG 104

BLAST of IVF0006242 vs. NCBI nr
Match: KAA0046136.1 (hypothetical protein E6C27_scaffold157G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 71.6 bits (174), Expect = 3.93e-12
Identity = 40/69 (57.97%), Postives = 45/69 (65.22%), Query Frame = 0

Query: 22 MTTGWRRKKASLEANEGVVGGGTRRRAEEGVVREGVLENGKAEEVRKSWRIYWRGRKSRR 81
          MTTGWR+KK  LEA EGV+                 +ENGK E+ RKSWRIYWRGRKSRR
Sbjct: 1  MTTGWRQKKLWLEAEEGVLN----------------VENGKDEKGRKSWRIYWRGRKSRR 53

Query: 82 RMEEKKFAP 90
           MEE+KF P
Sbjct: 61 GMEEEKFTP 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SHI42.4e-3178.35Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TUB64.6e-2298.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CTI71.1e-1861.22Lon protease 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G... [more]
A0A5D3CCS98.9e-1861.7650S ribosomal protein L15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A5A7TVG19.0e-1057.97Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0025306.11.57e-4078.35hypothetical protein E6C27_scaffold541G001610 [Cucumis melo var. makuwa][more]
KAA0047052.11.52e-2898.18hypothetical protein E6C27_scaffold466G00040 [Cucumis melo var. makuwa][more]
KAA0063229.11.23e-2267.37lon protease 2-like [Cucumis melo var. makuwa] >TYK13479.1 lon protease 2-like [... [more]
KAA0034559.19.82e-2261.7650S ribosomal protein L15 [Cucumis melo var. makuwa] >TYK09112.1 50S ribosomal p... [more]
KAA0046136.13.93e-1257.97hypothetical protein E6C27_scaffold157G00760 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..46

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0006242.1IVF0006242.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0110165 cellular anatomical entity