IVF0006222 (gene) Melon (IVF77) v1

Overview


Name	IVF0006222
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Transmembrane protein 230
Location	chr02: 19647102 .. 19647977 (-)
RNA-Seq Expression	IVF0006222
Synteny	IVF0006222

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAAATGTTTTTTAATTTCCTTACGCTGACGTGGAAGTTTTTTGCCTTTCTTCTCACTCCATCCTTCGCTCAGAGTCAAAAACAGGCGGAGAGCTTTTCCCTTCTCTTTGCTTCAAATACCAAATTTCCACCGTCGTCATCGCCCCCGCCCCCGCCTCCACCACCACCACTACCGTCTTCTTCACCAATCCGGCACTCTTTTTCTACAGATCGAACCTCCAACGCCTTCTTCTCCCAGAAATGGCGTATGTGGACCATGCGTTTTCCATAACAGACGAAGACATTATGATGGATTCTCCATTCACCGTCAATAATCGCCCTCCTATCAAAGAGATCGCTCTTGCCGTTTCTCTTCTCGTTTTCGGCATGATTGGAATCATCGTTGGTGCCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGTACTTTTCTTTATCTTTTTTTTTTTTTTTTTTTCCTGTTCTTGCTACAATTTTGCCCTAGTTCGTTCGAGGGTTAATTTTTGGTTTGTTCTTCAAAAATTTTCAGGAGTGTTTTTCTCGTTGTTGGGAGGTCTCTTGTTTATTCCAGGCTTCTATTACACAAGGATTGCGTATTATGCTTATAAGGGTTATAAGGGTTTCTCCTTTTCCAACATACCCCCTGTCTAAATTCTCAAAGTTCAACCAGTTCCTTACATTTGTACAGATTTTCTTCCACTCTTCCTTTTCTATGAAACTGTATCCGTTTACTATAGTTGAGGAGTGAAGAATTTTATGTGGATTTGCATTGTGCATTATCAAGATAGTCCTTCTTCTGTTTCTTGAAGTTTTTCTTTGTAGTGGTCGGTGACATAGCCGTTTCAATGAATGAAGGCCTATATATAAT

mRNA sequence

CTTAAATGTTTTTTAATTTCCTTACGCTGACGTGGAAGTTTTTTGCCTTTCTTCTCACTCCATCCTTCGCTCAGAGTCAAAAACAGGCGGAGAGCTTTTCCCTTCTCTTTGCTTCAAATACCAAATTTCCACCGTCGTCATCGCCCCCGCCCCCGCCTCCACCACCACCACTACCGTCTTCTTCACCAATCCGGCACTCTTTTTCTACAGATCGAACCTCCAACGCCTTCTTCTCCCAGAAATGGCGTATGTGGACCATGCGTTTTCCATAACAGACGAAGACATTATGATGGATTCTCCATTCACCGTCAATAATCGCCCTCCTATCAAAGAGATCGCTCTTGCCGTTTCTCTTCTCGTTTTCGGCATGATTGGAATCATCGTTGGTGCCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGAGTGTTTTTCTCGTTGTTGGGAGGTCTCTTGTTTATTCCAGGCTTCTATTACACAAGGATTGCGTATTATGCTTATAAGGGTTATAAGGGTTTCTCCTTTTCCAACATACCCCCTGTCTAAATTCTCAAAGTTCAACCAGTTCCTTACATTTGTACAGATTTTCTTCCACTCTTCCTTTTCTATGAAACTGTATCCGTTTACTATAGTTGAGGAGTGAAGAATTTTATGTGGATTTGCATTGTGCATTATCAAGATAGTCCTTCTTCTGTTTCTTGAAGTTTTTCTTTGTAGTGGTCGGTGACATAGCCGTTTCAATGAATGAAGGCCTATATATAAT

Coding sequence (CDS)

ATGGCGTATGTGGACCATGCGTTTTCCATAACAGACGAAGACATTATGATGGATTCTCCATTCACCGTCAATAATCGCCCTCCTATCAAAGAGATCGCTCTTGCCGTTTCTCTTCTCGTTTTCGGCATGATTGGAATCATCGTTGGTGCCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGAGTGTTTTTCTCGTTGTTGGGAGGTCTCTTGTTTATTCCAGGCTTCTATTACACAAGGATTGCGTATTATGCTTATAAGGGTTATAAGGGTTTCTCCTTTTCCAACATACCCCCTGTCTAA

Protein sequence

MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV

Homology

[Close]

BLAST of IVF0006222 vs. ExPASy Swiss-Prot
Match: Q5ZLH4 (Transmembrane protein 230 OS=Gallus gallus OX=9031 GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-10
Identity = 38/77 (49.35%), Postives = 52/77 (67.53%), Query Frame = 0


Query: 28  PIKEIALAVSLLVFGMIGIIVGAFMASNRV---GGDRAHGVFFSLLGGLLFIPGFYYTRI 87
           P K IALAV L + G   II+GA + +  +   G DRA  V   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALAVVLFMIGTFLIIIGALLLAGYISKGGTDRAIPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

[Close]

BLAST of IVF0006222 vs. ExPASy Swiss-Prot
Match: Q5R8X3 (Transmembrane protein 230 OS=Pongo abelii OX=9601 GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-10
Identity = 37/77 (48.05%), Postives = 51/77 (66.23%), Query Frame = 0


Query: 28  PIKEIALAVSLLVFGMIGIIVGAFMASNRV---GGDRAHGVFFSLLGGLLFIPGFYYTRI 87
           P K IALA  L + G   II+G+ + S  +   G DRA  V   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALATGLFLIGAFLIIIGSLLLSGYISKGGADRAIPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

[Close]

BLAST of IVF0006222 vs. ExPASy Swiss-Prot
Match: Q96A57 (Transmembrane protein 230 OS=Homo sapiens OX=9606 GN=TMEM230 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.4e-10
Identity = 37/77 (48.05%), Postives = 51/77 (66.23%), Query Frame = 0


Query: 28  PIKEIALAVSLLVFGMIGIIVGAFMASNRV---GGDRAHGVFFSLLGGLLFIPGFYYTRI 87
           P K IALA  L + G   II+G+ + S  +   G DRA  V   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALATVLFLIGAFLIIIGSLLLSGYISKGGADRAVPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

[Close]

BLAST of IVF0006222 vs. ExPASy Swiss-Prot
Match: Q8CIB6 (Transmembrane protein 230 OS=Mus musculus OX=10090 GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.4e-10
Identity = 37/77 (48.05%), Postives = 51/77 (66.23%), Query Frame = 0


Query: 28  PIKEIALAVSLLVFGMIGIIVGAFMASNRV---GGDRAHGVFFSLLGGLLFIPGFYYTRI 87
           P K IALA  L + G   II+G+ + S  +   G DRA  V   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALATVLFLIGTFLIIIGSLLLSGYISKGGADRAVPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

[Close]

BLAST of IVF0006222 vs. ExPASy Swiss-Prot
Match: Q5BJP5 (Transmembrane protein 230 OS=Rattus norvegicus OX=10116 GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.4e-10
Identity = 37/77 (48.05%), Postives = 51/77 (66.23%), Query Frame = 0


Query: 28  PIKEIALAVSLLVFGMIGIIVGAFMASNRV---GGDRAHGVFFSLLGGLLFIPGFYYTRI 87
           P K IALA  L + G   II+G+ + S  +   G DRA  V   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALATVLFLIGTFLIIIGSLLLSGYISKGGADRAVPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

[Close]

BLAST of IVF0006222 vs. ExPASy TrEMBL
Match: A0A1S3BWL2 (Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103494229 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.2e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of IVF0006222 vs. ExPASy TrEMBL
Match: A0A0A0LUC1 (Transmembrane protein 230 OS=Cucumis sativus OX=3659 GN=Csa_1G426960 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 9.4e-50
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           R HGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RVHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of IVF0006222 vs. ExPASy TrEMBL
Match: A0A6J1I4W8 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111470698 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.3e-48
Identity = 100/103 (97.09%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGIIVG FMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60

Query: 61  RAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of IVF0006222 vs. ExPASy TrEMBL
Match: A0A6J1EUE9 (Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111437657 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.3e-48
Identity = 100/103 (97.09%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGIIVG FMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60

Query: 61  RAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of IVF0006222 vs. ExPASy TrEMBL
Match: A0A6J1JDX9 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111484930 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47
Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60
           MAYVDHAFSI DEDI+MDSPF VNNRPPIKEIALAVSLLVFGMIGI+VGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSIADEDIVMDSPFPVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of IVF0006222 vs. NCBI nr
Match: XP_008453547.1 (PREDICTED: transmembrane protein 230-like [Cucumis melo])

HSP 1 Score: 207 bits (526), Expect = 3.21e-67
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
           RAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of IVF0006222 vs. NCBI nr
Match: XP_004146339.1 (transmembrane protein 230 [Cucumis sativus] >KGN65495.1 hypothetical protein Csa_019721 [Cucumis sativus])

HSP 1 Score: 205 bits (522), Expect = 1.31e-66
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
           R HGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RVHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of IVF0006222 vs. NCBI nr
Match: XP_038879685.1 (transmembrane protein 230 [Benincasa hispida])

HSP 1 Score: 204 bits (519), Expect = 3.75e-66
Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGI+VGAFMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
           RAHGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of IVF0006222 vs. NCBI nr
Match: XP_022931504.1 (transmembrane protein 230-like [Cucurbita moschata] >XP_022972056.1 transmembrane protein 230-like [Cucurbita maxima] >XP_023529399.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >KAG6587719.1 Transmembrane protein 230, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 201 bits (510), Expect = 8.87e-65
Identity = 100/103 (97.09%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGIIVG FMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60

Query: 61  RAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
           RAHGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of IVF0006222 vs. NCBI nr
Match: KAG7021684.1 (Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 200 bits (509), Expect = 1.26e-64
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGI+VG FMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGD 60

Query: 61  RAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
           RAHGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of IVF0006222 vs. TAIR 10
Match: AT4G29850.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 177.9 bits (450), Expect = 4.0e-45
Identity = 85/103 (82.52%), Postives = 95/103 (92.23%), Query Frame = 0


Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60
           MAYVDHAFSITDEDIM+++ +TVNNRPP+KEIALAV+LLVFG +GI+ G FMA NRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMIETSYTVNNRPPVKEIALAVALLVFGTLGIVSGFFMAYNRVGGD 60

Query: 61  RAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           R HG+FF +LG LLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RGHGIFFIVLGCLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of IVF0006222 vs. TAIR 10
Match: AT2G19350.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 169.1 bits (427), Expect = 1.9e-42
Identity = 80/103 (77.67%), Postives = 93/103 (90.29%), Query Frame = 0


Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60
           MAYVDHAFSI+DED+M+ + +TV+NRPP+KEI+LAV LLVFG +GI++G FMA NRVGGD
Sbjct: 1   MAYVDHAFSISDEDLMIGTSYTVSNRPPVKEISLAVGLLVFGTLGIVLGFFMAYNRVGGD 60

Query: 61  RAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           R HG+FF +LG LLFIPGFYYTRIAYYAYKGYKGFSFSNIP V
Sbjct: 61  RGHGIFFIVLGCLLFIPGFYYTRIAYYAYKGYKGFSFSNIPSV 103

[Close]

BLAST of IVF0006222 vs. TAIR 10
Match: AT3G29170.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 65.1 bits (157), Expect = 3.8e-11
Identity = 34/77 (44.16%), Postives = 50/77 (64.94%), Query Frame = 0


Query: 25  NRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRI 84
           +R P K IALAV LL  G + +++  F+    + GD + G    +LG L F+PGFY TRI
Sbjct: 43  DRVPWKSIALAVFLLFLGCLLLLLSFFIFIGHMEGDSSQGYALLVLGILTFLPGFYETRI 102

Query: 85  AYYAYKGYKGFSFSNIP 102
           AYY+++G +G+ F+ IP
Sbjct: 103 AYYSWRGAEGYRFAAIP 119

The following BLAST results are available for this feature:

BLAST of IVF0006222 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ZLH4	1.4e-10	49.35	Transmembrane protein 230 OS=Gallus gallus OX=9031 GN=TMEM230 PE=2 SV=1	[more]
Q5R8X3	1.4e-10	48.05	Transmembrane protein 230 OS=Pongo abelii OX=9601 GN=TMEM230 PE=2 SV=1	[more]
Q96A57	2.4e-10	48.05	Transmembrane protein 230 OS=Homo sapiens OX=9606 GN=TMEM230 PE=1 SV=1	[more]
Q8CIB6	2.4e-10	48.05	Transmembrane protein 230 OS=Mus musculus OX=10090 GN=Tmem230 PE=1 SV=1	[more]
Q5BJP5	2.4e-10	48.05	Transmembrane protein 230 OS=Rattus norvegicus OX=10116 GN=Tmem230 PE=1 SV=1	[more]

BLAST of IVF0006222 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BWL2	3.2e-50	100.00	Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103494229 PE=3 SV=1	[more]
A0A0A0LUC1	9.4e-50	99.03	Transmembrane protein 230 OS=Cucumis sativus OX=3659 GN=Csa_1G426960 PE=3 SV=1	[more]
A0A6J1I4W8	2.3e-48	97.09	Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111470698 PE=3 SV=1	[more]
A0A6J1EUE9	2.3e-48	97.09	Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111437657 PE=3 SV=...	[more]
A0A6J1JDX9	1.1e-47	95.15	Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111484930 PE=3 SV=1	[more]

BLAST of IVF0006222 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453547.1	3.21e-67	100.00	PREDICTED: transmembrane protein 230-like [Cucumis melo]	[more]
XP_004146339.1	1.31e-66	99.03	transmembrane protein 230 [Cucumis sativus] >KGN65495.1 hypothetical protein Csa...	[more]
XP_038879685.1	3.75e-66	98.06	transmembrane protein 230 [Benincasa hispida]	[more]
XP_022931504.1	8.87e-65	97.09	transmembrane protein 230-like [Cucurbita moschata] >XP_022972056.1 transmembran...	[more]
KAG7021684.1	1.26e-64	96.12	Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of IVF0006222 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29850.1	4.0e-45	82.52	Eukaryotic protein of unknown function (DUF872)	[more]
AT2G19350.1	1.9e-42	77.67	Eukaryotic protein of unknown function (DUF872)	[more]
AT3G29170.1	3.8e-11	44.16	Eukaryotic protein of unknown function (DUF872)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008590	Transmembrane protein 230/134	PFAM	PF05915	DUF872	coord: 29..101 e-value: 1.2E-16 score: 60.9
IPR044234	Transmembrane protein 230	PANTHER	PTHR15664	C20ORF30 PROTEIN	coord: 1..103
None	No IPR available	PANTHER	PTHR15664:SF18	TRANSMEMBRANE PROTEIN 230-LIKE	coord: 1..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0006222.1	IVF0006222.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005776	autophagosome
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane